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Pregenerated sensors for TREM3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000041754

Ensembl transcript IDs: ENSMUST00000048065.6

Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGGTCCAAATCTCTCTCAATTTTATATTCTTCACTGATGTCTCATaGGCCTCCTTCTACACAGCTCTCCTCAGAGCTGTCCTCTGGGAG +
Preference number: 1 (lower is better)
Translates to: KVQISLNFIFFTDVS*ASFYTALLRAVLWE
Trigger: CTCCCAGAGGACAGCTCTGAGGAGAGCTGTGTAGAAGGAGGCTCATGAGACATCAGTGAAGAATATAAAATTGAGAGAGATTTGGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
3UTR TCA 90 bp TGCTCCACCAAAGGTCCAAATCTCTCTCAATTTTATATTCTTCACTaGTGTCTCATGAGCCTCCTTCTACACAGCTCTCCTCAGAGCTGT +
Preference number: 1 (lower is better)
Translates to: CSTKGPNLSQFYILH*CLMSLLLHSSPQSC
Trigger: ACAGCTCTGAGGAGAGCTGTGTAGAAGGAGGCTCATGAGACATCAGTGAAGAATATAAAATTGAGAGAGATTTGGACCTTTGGTGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
3UTR CCA 72 bp GCCTCCTTCTACACAGCTCTCCTCAGAGCTGTCCTCTaGGAGTATCATGTGCTAACTAGAGTTCACAAGGAG +
Preference number: 3 (lower is better)
Translates to: ASFYTALLRAVL*EYHVLTRVHKE
Trigger: CTCCTTGTGAACTCTAGTTAGCACATGATACTCCCAGAGGACAGCTCTGAGGAGAGCTGTGTAGAAGGAGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
3UTR-3UTR CAA 90 bp TTACCAGTCCACAGCATGGCAGACCTGGTTAGCAGGAGAGAAATGGTGATAAGAAGAACATCTGGTATGTaGTTAATAGATAAGGGAAGG +
Preference number: 3 (lower is better)
Translates to: LPVHSMADLVSRREMVIRRTSGM*LIDKGR
Trigger: CCTTCCCTTATCTATTAACAACATACCAGATGTTCT...TCTTATCACCATTTCTCTCCTGCTAACCAGGTCTGCCATGCTGTGGACTGGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
3UTR TCA 72 bp ATCTCTCTCAATTTTATATTCTTCACTGATGTCTCATaGGCCTCCTTCTACACAGCTCTCCTCAGAGCTGTC +
Preference number: 3 (lower is better)
Translates to: ISLNFIFFTDVS*ASFYTALLRAV
Trigger: GACAGCTCTGAGGAGAGCTGTGTAGAAGGAGGCTCATGAGACATCAGTGAAGAATATAAAATTGAGAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS-3UTR TCA 90 bp CACAAGGAGAATGTAGGAAGGCCCAGATTGTCCCCAATACAGAACATCTGGTATGAGAACCGTGGCTTCTaGCCCGCTGCCAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: HKENVGRPRLSPIQNIWYENRGF*PAARPS
Trigger: TGAAGGCCTGGCAGCGGGTCAGAAGCCACGGTTCTC...ATACCAGATGTTCTGTATTGGGGACAATCTGGGCCTTCCTACATTCTCCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS-3UTR GCA 90 bp TTACCAGTCCACAGCATGGCAGACCTGGTTAGCAGGAGAGAAATGGTGATAAGATGGCTTCTGACCCGCTaGCAGGCCTTCAGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: LPVHSMADLVSRREMVIRWLLTR*QAFRLS
Trigger: ACTGAGCCTGAAGGCCTGGCAGCGGGTCAGAAGCCA...TCTTATCACCATTTCTCTCCTGCTAACCAGGTCTGCCATGCTGTGGACTGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS-3UTR GCA 90 bp CACAAGGAGAATGTAGGAAGGCCCAGATTGTCCCCAATACAGAACATCTGGTATCCCACATCTTGCCTCTaGAGCCCAGTCACCGTGACC +
Preference number: 4 (lower is better)
Translates to: HKENVGRPRLSPIQNIWYPTSCL*SPVTVT
Trigger: GGTCACGGTGACTGGGCTGCAGAGGCAAGATGTGGG...ATACCAGATGTTCTGTATTGGGGACAATCTGGGCCTTCCTACATTCTCCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS-3UTR GCA 90 bp TTACCAGTCCACAGCATGGCAGACCTGGTTAGCAGGAGAGAAATGGTGATAAGATACAGCCCCACATCTTaGCTCTGCAGCCCAGTCACC +
Preference number: 4 (lower is better)
Translates to: LPVHSMADLVSRREMVIRYSPTS*LCSPVT
Trigger: GGTGACTGGGCTGCAGAGGCAAGATGTGGGGCTGTA...TCTTATCACCATTTCTCTCCTGCTAACCAGGTCTGCCATGCTGTGGACTGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS-3UTR TCA 90 bp TCACAAGGAGAATGTAGGAAGGCCCAGATTGTCCCCAATACAGAACATCTGGTACAGCCCTGGCCACGTTaGAGTCTGCCTTTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SQGECRKAQIVPNTEHLVQPWPR*SLPFWC
Trigger: ACACCAGAAAGGCAGACTTCAACGTGGCCAGGGCTG...TACCAGATGTTCTGTATTGGGGACAATCTGGGCCTTCCTACATTCTCCTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS-3UTR CCA 90 bp TACACAGCTCTCCTCAGAGCTGTCCTCTGGGAGTATCATGTGCTAACTAGAGTTTCCTCATCTCCAGCTTaGAGTCCCGAGACACAGAGC +
Preference number: 4 (lower is better)
Translates to: YTALLRAVLWEYHVLTRVSSSPA*SPETQS
Trigger: GCTCTGTGTCTCGGGACTCCAAGCTGGAGATGAGGA...AACTCTAGTTAGCACATGATACTCCCAGAGGACAGCTCTGAGGAGAGCTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS-3UTR TCA 90 bp CACAAGGAGAATGTAGGAAGGCCCAGATTGTCCCCAATACAGAACATCTGGTATCCTTTCTGGTGTTTGTaGGCACCAGAGTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: HKENVGRPRLSPIQNIWYPFWCL*APESLE
Trigger: CTCCAGAGACTCTGGTGCTCACAAACACCAGAAAGG...ATACCAGATGTTCTGTATTGGGGACAATCTGGGCCTTCCTACATTCTCCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS-3UTR TCA 90 bp CACAAGGAGAATGTAGGAAGGCCCAGATTGTCCCCAATACAGAACATCTGGTATAAAGACAAACAGGACTaGGAAGACCAGGCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: HKENVGRPRLSPIQNIWYKDKQD*EDQALV
Trigger: AACAAGGGCCTGGTCTTCTCAGTCCTGTTTGTCTTT...ATACCAGATGTTCTGTATTGGGGACAATCTGGGCCTTCCTACATTCTCCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS-3UTR CCA 90 bp AGAGTTCACAAGGAGAATGTAGGAAGGCCCAGATTGTCCCCAATACAGAACATCAGACTCCCTGTACTTTaGATGTCTTGGAAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: RVHKENVGRPRLSPIQNIRLPVL*MSWKAV
Trigger: TACAGCCTTCCAAGACATCCAAAGTACAGGGAGTCT...GATGTTCTGTATTGGGGACAATCTGGGCCTTCCTACATTCTCCTTGTGAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
3UTR CAA 72 bp GGCCCAGATTGTCCCCAATACAGAACATCTGGTATGTaGTTAATAGATAAGGGAAGGTGTGCTCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: GPDCPQYRTSGM*LIDKGRCAHSL
Trigger: CAAGCTGTGAGCACACCTTCCCTTATCTATTAACAACATACCAGATGTTCTGTATTGGGGACAATCTGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS-3UTR CCA 90 bp CAAAGGTCCAAATCTCTCTCAATTTTATATTCTTCACTGATGTCTCATGAGCCTGAGCACCAGAGTCTCTaGAGAACCGTGGCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: QRSKSLSILYSSLMSHEPEHQSL*RTVASD
Trigger: GTCAGAAGCCACGGTTCTCCAGAGACTCTGGTGCTC...AGGCTCATGAGACATCAGTGAAGAATATAAAATTGAGAGAGATTTGGACCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
3UTR CAA 72 bp ACTAGAGTTCACAAGGAGAATGTAGGAAGGCCCAGATaGTCCCCAATACAGAACATCTGGTATGTTGTTAAT +
Preference number: 4 (lower is better)
Translates to: TRVHKENVGRPR*SPIQNIWYVVN
Trigger: ATTAACAACATACCAGATGTTCTGTATTGGGGACAATCTGGGCCTTCCTACATTCTCCTTGTGAACTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS CCA 90 bp CACGTTGAAGTCTGCCTTTCTGGTGTTTGTGAGCACCAGAGTCTCTaGAGAACCGTGGCTTCTGACCCGCTGCCAGGCCTTCAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: HVEVCLSGVCEHQSL*RTVASDPLPGLQAQ
Trigger: CTGAGCCTGAAGGCCTGGCAGCGGGTCAGAAGCCACGGTTCTCCAGAGACTCTGGTGCTCACAAACACCAGAAAGGCAGACTTCAACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS CCA 90 bp TCTGCCTTTCTGGTGTTTGTGAGCACCAGAGTCTCTGGAGAACCGTaGCTTCTGACCCGCTGCCAGGCCTTCAGGCTCAGTGAGTATAGC +
Preference number: 5 (lower is better)
Translates to: SAFLVFVSTRVSGEP*LLTRCQAFRLSEYS
Trigger: GCTATACTCACTGAGCCTGAAGGCCTGGCAGCGGGTCAGAAGCCACGGTTCTCCAGAGACTCTGGTGCTCACAAACACCAGAAAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS-3UTR CAA 90 bp TGTCTCATGAGCCTCCTTCTACACAGCTCTCCTCAGAGCTGTCCTCTGGGAGTAGTACAGCCCCACATCTaGCCTCTGCAGCCCAGTCAC +
Preference number: 5 (lower is better)
Translates to: CLMSLLLHSSPQSCPLGVVQPHI*PLQPSH
Trigger: GTGACTGGGCTGCAGAGGCAAGATGTGGGGCTGTAC...TACTCCCAGAGGACAGCTCTGAGGAGAGCTGTGTAGAAGGAGGCTCATGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS CCA 90 bp TTCTCGCCCTCCAGAAAACACTTGTGTTCTTCCTCATCTCCAGCTTaGAGTCCCGAGACACAGAGCATCAGCCCCAGCCATAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: FSPSRKHLCSSSSPA*SPETQSISPSHSSS
Trigger: GCTGCTGCTATGGCTGGGGCTGATGCTCTGTGTCTCGGGACTCCAAGCTGGAGATGAGGAAGAACACAAGTGTTTTCTGGAGGGCGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS GCA 90 bp ATAATCCTCCAGCAAGTACTTCCCAGCCCTGGCCACGTTGAAGTCTaGCTTTCTGGTGTTTGTGAGCACCAGAGTCTCTGGAGAACCGTG +
Preference number: 5 (lower is better)
Translates to: IILQQVLPSPGHVEV*LSGVCEHQSLWRTV
Trigger: CACGGTTCTCCAGAGACTCTGGTGCTCACAAACACCAGAAAGGCAGACTTCAACGTGGCCAGGGCTGGGAAGTACTTGCTGGAGGATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS GCA 90 bp GCCACACGTCAGAACGATCACCATCACTGGCTTCCCTTGACACCATaGCAGCCGTATCCGTTGACGCAGAATGATAACATTGTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: ATRQNDHHHWLPLTP*QPYPLTQNDNIVRR
Trigger: TCTCCTGACAATGTTATCATTCTGCGTCAACGGATACGGCTGGCATGGTGTCAAGGGAAGCCAGTGATGGTGATCGTTCTGACGTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS-3UTR CAA 90 bp CACAAGGAGAATGTAGGAAGGCCCAGATTGTCCCCAATACAGAACATCTGGTATACCTTAGGCCCAGCTTaGCAGAGAAAGACAAACAGG +
Preference number: 5 (lower is better)
Translates to: HKENVGRPRLSPIQNIWYTLGPA*QRKTNR
Trigger: CCTGTTTGTCTTTCTCTGCAAAGCTGGGCCTAAGGT...ATACCAGATGTTCTGTATTGGGGACAATCTGGGCCTTCCTACATTCTCCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS-3UTR CAA 90 bp TCTCTCTCAATTTTATATTCTTCACTGATGTCTCATGAGCCTCCTTCTACACAGTGTACTTTGGATGTCTaGGAAGGCTGTAACACCTTA +
Preference number: 5 (lower is better)
Translates to: SLSILYSSLMSHEPPSTQCTLDV*EGCNTL
Trigger: TAAGGTGTTACAGCCTTCCAAGACATCCAAAGTACA...CTGTGTAGAAGGAGGCTCATGAGACATCAGTGAAGAATATAAAATTGAGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS CCA 72 bp GTCTGCCTTTCTGGTGTTTGTGAGCACCAGAGTCTCTaGAGAACCGTGGCTTCTGACCCGCTGCCAGGCCTT +
Preference number: 6 (lower is better)
Translates to: VCLSGVCEHQSL*RTVASDPLPGL
Trigger: AAGGCCTGGCAGCGGGTCAGAAGCCACGGTTCTCCAGAGACTCTGGTGCTCACAAACACCAGAAAGGCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS CAA 72 bp AGAGAGGTAGACCACACACTGGTACAGCCCCACATCTaGCCTCTGCAGCCCAGTCACCGTGACCTTGACGAC +
Preference number: 6 (lower is better)
Translates to: REVDHTLVQPHI*PLQPSHRDLDD
Trigger: GTCGTCAAGGTCACGGTGACTGGGCTGCAGAGGCAAGATGTGGGGCTGTACCAGTGTGTGGTCTACCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS TCA 72 bp CCCGCTGCCAGGCCTTCAGGCTCAGTGAGTATAGCATaGTGTTGTAAGGACAAGTCAGGGTCAGGTTCTCGC +
Preference number: 6 (lower is better)
Translates to: PAARPSGSVSIA*CCKDKSGSGSR
Trigger: GCGAGAACCTGACCCTGACTTGTCCTTACAACATCATGCTATACTCACTGAGCCTGAAGGCCTGGCAGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS GCA 72 bp CAGCAAGTACTTCCCAGCCCTGGCCACGTTGAAGTCTaGCTTTCTGGTGTTTGTGAGCACCAGAGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: QQVLPSPGHVEV*LSGVCEHQSLW
Trigger: CCAGAGACTCTGGTGCTCACAAACACCAGAAAGGCAGACTTCAACGTGGCCAGGGCTGGGAAGTACTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS CAA 72 bp GCCACACGTCAGAACGATCACCATCACTGGCTTCCCTaGACACCATGCCAGCCGTATCCGTTGACGCAGAAT +
Preference number: 6 (lower is better)
Translates to: ATRQNDHHHWLP*TPCQPYPLTQN
Trigger: ATTCTGCGTCAACGGATACGGCTGGCATGGTGTCAAGGGAAGCCAGTGATGGTGATCGTTCTGACGTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS CAA 72 bp CAAGTCAGGGTCAGGTTCTCGCCCTCCAGAAAACACTaGTGTTCTTCCTCATCTCCAGCTTGGAGTCCCGAG +
Preference number: 6 (lower is better)
Translates to: QVRVRFSPSRKH*CSSSSPAWSPE
Trigger: CTCGGGACTCCAAGCTGGAGATGAGGAAGAACACAAGTGTTTTCTGGAGGGCGAGAACCTGACCCTGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS CCA 72 bp TCCAGAAAACACTTGTGTTCTTCCTCATCTCCAGCTTaGAGTCCCGAGACACAGAGCATCAGCCCCAGCCAT +
Preference number: 6 (lower is better)
Translates to: SRKHLCSSSSPA*SPETQSISPSH
Trigger: ATGGCTGGGGCTGATGCTCTGTGTCTCGGGACTCCAAGCTGGAGATGAGGAAGAACACAAGTGTTTTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS CAA 90 bp GATCACCATCACTGGCTTCCCTTGACACCATGCCAGCCGTATCCGTaGACGCAGAATGATAACATTGTCAGGAGAGAGGTAGACCACACA +
Preference number: 6 (lower is better)
Translates to: DHHHWLPLTPCQPYP*TQNDNIVRREVDHT
Trigger: TGTGTGGTCTACCTCTCTCCTGACAATGTTATCATTCTGCGTCAACGGATACGGCTGGCATGGTGTCAAGGGAAGCCAGTGATGGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS CAA 72 bp CACTGGCTTCCCTTGACACCATGCCAGCCGTATCCGTaGACGCAGAATGATAACATTGTCAGGAGAGAGGTA +
Preference number: 6 (lower is better)
Translates to: HWLPLTPCQPYP*TQNDNIVRREV
Trigger: TACCTCTCTCCTGACAATGTTATCATTCTGCGTCAACGGATACGGCTGGCATGGTGTCAAGGGAAGCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS TCA 72 bp CAAACAGGACTGAGAAGACCAGGCCCTTGTTTAGTATaGAGCCACACGTCAGAACGATCACCATCACTGGCT +
Preference number: 6 (lower is better)
Translates to: QTGLRRPGPCLV*SHTSERSPSLA
Trigger: AGCCAGTGATGGTGATCGTTCTGACGTGTGGCTTCATACTAAACAAGGGCCTGGTCTTCTCAGTCCTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS GCA 72 bp CAGAACGATCACCATCACTGGCTTCCCTTGACACCATaGCAGCCGTATCCGTTGACGCAGAATGATAACATT +
Preference number: 6 (lower is better)
Translates to: QNDHHHWLPLTP*QPYPLTQNDNI
Trigger: AATGTTATCATTCTGCGTCAACGGATACGGCTGGCATGGTGTCAAGGGAAGCCAGTGATGGTGATCGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS CAA 72 bp GATGTCTTGGAAGGCTGTAACACCTTAGGCCCAGCTTaGCAGAGAAAGACAAACAGGACTGAGAAGACCAGG +
Preference number: 6 (lower is better)
Translates to: DVLEGCNTLGPA*QRKTNRTEKTR
Trigger: CCTGGTCTTCTCAGTCCTGTTTGTCTTTCTCTGCAAAGCTGGGCCTAAGGTGTTACAGCCTTCCAAGACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6
CDS CAA 72 bp TACTGTTTCTCAGAGACTCCCTGTACTTTGGATGTCTaGGAAGGCTGTAACACCTTAGGCCCAGCTTTGCAG +
Preference number: 6 (lower is better)
Translates to: YCFSETPCTLDV*EGCNTLGPALQ
Trigger: CTGCAAAGCTGGGCCTAAGGTGTTACAGCCTTCCAAGACATCCAAAGTACAGGGAGTCTCTGAGAAACAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048065.6