Pregenerated sensors for TREH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032098Ensembl transcript IDs: ENSMUST00000034609.11, ENSMUST00000071219.12, ENSMUST00000139389.8, ENSMUST00000150822.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACGCGTTCAGATCAGCGGGTACCATTTTGCTGGTTCGGATGCTGCTaGGCAAATCAGGGTCTGGGCCTCCAACAAGCCAGCGTGAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: TRSDQRVPFCWFGCC*ANQGLGLQQASVKR Trigger: TCTCTTCACGCTGGCTTGTTGGAGGCCCAGACCCTGATTTGCTCAGCAGCATCCGAACCAGCAAAATGGTACCCGCTGATCTGAACGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR CCA 90 bp | TGTCACTGTAGCAGAAGACTGAGAAGAAGGGCAGCCACTAGGCAGTaGGGTCCCAGGGAAGCTAACTGGGTCCCTGAAGTCAACTGGTCA | + |
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Preference number: 1 (lower is better) Translates to: CHCSRRLRRRAATRQ*GPREANWVPEVNWS Trigger: TGACCAGTTGACTTCAGGGACCCAGTTAGCTTCCCTGGGACCCCACTGCCTAGTGGCTGCCCTTCTTCTCAGTCTTCTGCTACAGTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR CCA 90 bp | GGAGTGGGGGCTGGCTCCGTTGCAGGTAATATATGCGTCCACCGTTaGGGATATGTCCGTAGGTCTTCACCAGATCCAGAAAGTTTTGCA | + |
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Preference number: 1 (lower is better) Translates to: GVGAGSVAGNICVHR*GYVRRSSPDPESFA Trigger: TGCAAAACTTTCTGGATCTGGTGAAGACCTACGGACATATCCCCAACGGTGGACGCATATATTACCTGCAACGGAGCCAGCCCCCACTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR CCA 90 bp | CACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTaGTCACTTCTTGGCTCAGGACACTATGAGCAGGAAGGGGCGGGG | + |
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Preference number: 1 (lower is better) Translates to: HFLAQNTVKITVLTS*SLLGSGHYEQEGAG Trigger: CCCCGCCCCTTCCTGCTCATAGTGTCCTGAGCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
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| 3UTR CCA 90 bp | GGCATTGGGGAAGTCCCACTGCTGGCCTGTGTTACGAAGAGAGGTTaGGATTCCATATTGGTAGGTCAAGATCTTGCTGTCCTCCAAGTA | + |
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Preference number: 1 (lower is better) Translates to: GIGEVPLLACVTKRG*DSILVGQDLAVLQV Trigger: TACTTGGAGGACAGCAAGATCTTGACCTACCAATATGGAATCCCAACCTCTCTTCGTAACACAGGCCAGCAGTGGGACTTCCCCAATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR CCA 90 bp | CAGGATTCAGTTTCCGCCCTCGTGAAAATTACAACCTTGACCTCTTaGTCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGAC | + |
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Preference number: 1 (lower is better) Translates to: QDSVSALVKITTLTS*SLLGSEHCENYSLD Trigger: GTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGACCAAGAGGTCAAGGTTGTAATTTTCACGAGGGCGGAAACTGAATCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
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| 3UTR CAA 90 bp | TCCTCTGCTTGGCACAGGAACGCGTTCAGATCAGCGGGTACCATTTaGCTGGTTCGGATGCTGCTGAGCAAATCAGGGTCTGGGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: SSAWHRNAFRSAGTI*LVRMLLSKSGSGPP Trigger: TGGAGGCCCAGACCCTGATTTGCTCAGCAGCATCCGAACCAGCAAAATGGTACCCGCTGATCTGAACGCGTTCCTGTGCCAAGCAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCCACAGAGTCTCTCGGTCCCCTTCTGGCACAGAGTTTGCCAATTCTGCGTTTCCTGTAGGACTCTaGCCTGGGTCCCCCATAAGG | + |
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Preference number: 2 (lower is better) Translates to: SAHRVSRSPSGTEFANSAFPVGL*PGSPIR Trigger: CCTTATGGGGGACCCAGGCCAGAGTCCTACAGGAAA...CGCAGAATTGGCAAACTCTGTGCCAGAAGGGGACCGAGAGACTCTGTGGGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR-3UTR TCA 90 bp | CACTGTAGCAGAAGACTGAGAAGAAGGGCAGCCACTAGGCAGTGGGGTCCCAGGATAGCTTTGTCCTCCTaGGACTACAGAGACAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: HCSRRLRRRAATRQWGPRIALSS*DYRDSP Trigger: AGGACTGTCTCTGTAGTCTCAGGAGGACAAAGCTAT...CCTGGGACCCCACTGCCTAGTGGCTGCCCTTCTTCTCAGTCTTCTGCTACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCTGCGTCTTTCCTGTAGGACTCTGGCCTGGGTCCCCCATAAGGGACATAGTCATATCGATCCATCATaGGAGTCAGGAGTGGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: ILRLSCRTLAWVPHKGHSHIDPS*ESGVGA Trigger: AGCCCCCACTCCTGACTCTCATGATGGATCGATATG...ACTATGTCCCTTATGGGGGACCCAGGCCAGAGTCCTACAGGAAAGACGCAGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGAAGCATCAGGGCCAATCCGTTTGTCCAGCCAAATCCTTCCTGAACTTCATCTAATGACCAGGTCCTaGAGTGGGGCCCAGGCATTG | + |
|
Preference number: 2 (lower is better) Translates to: PEASGPIRLSSQILPELHLMTRS*SGAQAL Trigger: CAATGCCTGGGCCCCACTGCAGGACCTGGTCATTAG...ATGAAGTTCAGGAAGGATTTGGCTGGACAAACGGATTGGCCCTGATGCTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139389.8 ENSMUST00000150822.2 |
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| 3UTR CAA 90 bp | TACATATCGATCCATCATGAGAGTCAGGAGTGGGGGCTGGCTCCGTaGCAGGTAATATATGCGTCCACCGTTGGGGATATGTCCGTAGGT | + |
|
Preference number: 2 (lower is better) Translates to: YISIHHESQEWGLAP*QVIYASTVGDMSVG Trigger: ACCTACGGACATATCCCCAACGGTGGACGCATATATTACCTGCAACGGAGCCAGCCCCCACTCCTGACTCTCATGATGGATCGATATGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR CAA 90 bp | AGGCATTGGGGAAGTCCCACTGCTGGCCTGTGTTACGAAGAGAGGTaGGGATTCCATATTGGTAGGTCAAGATCTTGCTGTCCTCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: RHWGSPTAGLCYEER*GFHIGRSRSCCPPS Trigger: ACTTGGAGGACAGCAAGATCTTGACCTACCAATATGGAATCCCAACCTCTCTTCGTAACACAGGCCAGCAGTGGGACTTCCCCAATGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCACCATAGCGATCCAGAAGCATCAGGGCCAATCCGTTTGTCCAGCCAAAACAGTCTTGACCTCTTaGTCACTTCTTGGCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LVTIAIQKHQGQSVCPAKTVLTS*SLLGSG Trigger: TCCTGAGCCAAGAAGTGACCAAGAGGTCAAGACTGT...TTTGGCTGGACAAACGGATTGGCCCTGATGCTTCTGGATCGCTATGGTGACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGCCAATCCGTTTGTCCAGCCAAATCCTTCCTGAACTTCATACTCCCCTCGTTTTGATCCAATTCTaGGCCAGCTGGAAAGCCACC | + |
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Preference number: 2 (lower is better) Translates to: SGPIRLSSQILPELHTPLVLIQF*ASWKAT Trigger: GGTGGCTTTCCAGCTGGCCCAGAATTGGATCAAAAC...GAGGGGAGTATGAAGTTCAGGAAGGATTTGGCTGGACAAACGGATTGGCCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139389.8 ENSMUST00000150822.2 |
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| 3UTR CAA 90 bp | GTCCCACTGCTGGCCTGTGTTACGAAGAGAGGTTGGGATTCCATATaGGTAGGTCAAGATCTTGCTGTCCTCCAAGTACTTCAGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: VPLLACVTKRGWDSI*VGQDLAVLQVLQSL Trigger: AAGGCTCTGAAGTACTTGGAGGACAGCAAGATCTTGACCTACCAATATGGAATCCCAACCTCTCTTCGTAACACAGGCCAGCAGTGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGAAGCATCAGGGCCAATCCGTTTGTCCAGCCAAATCCTTCCTGAACTTCATCTTCTCAAACATCGCTaGCTTTTGGGAGTAGACTTT | + |
|
Preference number: 2 (lower is better) Translates to: PEASGPIRLSSQILPELHLLKHR*LLGVDF Trigger: AAAGTCTACTCCCAAAAGTCAGCGATGTTTGAGAAG...ATGAAGTTCAGGAAGGATTTGGCTGGACAAACGGATTGGCCCTGATGCTTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139389.8 ENSMUST00000150822.2 |
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| 3UTR GCA 72 bp | GAAGCTGACTTGGCCAAACCTCTAATGACCAGGTCCTaGAGTGGGGCCCAGGCATTGGGGAAGTCCCACTGC | + |
|
Preference number: 3 (lower is better) Translates to: EADLAKPLMTRS*SGAQALGKSHC Trigger: GCAGTGGGACTTCCCCAATGCCTGGGCCCCACTGCAGGACCTGGTCATTAGAGGTTTGGCCAAGTCAGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139389.8 ENSMUST00000150822.2 |
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| 3UTR CCA 72 bp | AGCAGAAGACTGAGAAGAAGGGCAGCCACTAGGCAGTaGGGTCCCAGGGAAGCTAACTGGGTCCCTGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: SRRLRRRAATRQ*GPREANWVPEV Trigger: GACTTCAGGGACCCAGTTAGCTTCCCTGGGACCCCACTGCCTAGTGGCTGCCCTTCTTCTCAGTCTTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139389.8 ENSMUST00000150822.2 |
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| 3UTR TCA 72 bp | GCTAGAAGGGAGGTAGAGCAAGGGTTTAATGAACCATaGGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: ARREVEQGFNEP*AGARGESAGSE Trigger: CTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGTTCATTAAACCCTTGCTCTACCTCCCTTCTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
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| 3UTR TCA 72 bp | GATCAGCGGGTACCATTTTGCTGGTTCGGATGCTGCTaGGCAAATCAGGGTCTGGGCCTCCAACAAGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: DQRVPFCWFGCC*ANQGLGLQQAS Trigger: GCTGGCTTGTTGGAGGCCCAGACCCTGATTTGCTCAGCAGCATCCGAACCAGCAAAATGGTACCCGCTGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR CCA 72 bp | TGCAGTGGGGCCCAGGCATTGGGGAAGTCCCACTGCTaGCCTGTGTTACGAAGAGAGGTTGGGATTCCATAT | + |
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Preference number: 3 (lower is better) Translates to: CSGAQALGKSHC*PVLRREVGIPY Trigger: ATATGGAATCCCAACCTCTCTTCGTAACACAGGCCAGCAGTGGGACTTCCCCAATGCCTGGGCCCCACTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR-3UTR CAA 90 bp | ATTCTGCGTCTTTCCTGTAGGACTCTGGCCTGGGTCCCCCATAAGGGACATAGTTGGGGGCTGGCTCCGTaGCAGGTAATATATGCGTCC | + |
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Preference number: 3 (lower is better) Translates to: ILRLSCRTLAWVPHKGHSWGLAP*QVIYAS Trigger: GGACGCATATATTACCTGCAACGGAGCCAGCCCCCA...ACTATGTCCCTTATGGGGGACCCAGGCCAGAGTCCTACAGGAAAGACGCAGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR GCA 72 bp | TCAGGAGTGGGGGCTGGCTCCGTTGCAGGTAATATATaGGTCCACCGTTGGGGATATGTCCGTAGGTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: SGVGAGSVAGNI*VHRWGYVRRSS Trigger: TGAAGACCTACGGACATATCCCCAACGGTGGACGCATATATTACCTGCAACGGAGCCAGCCCCCACTCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR GCA 72 bp | CCACAGAGTCTCTCGGTCCCCTTCTGGCACAGAGTTTaGCAATTCTGCGTCTTTCCTGTAGGACTCTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: PQSLSVPFWHRV*QFCVFPVGLWP Trigger: AGGCCAGAGTCCTACAGGAAAGACGCAGAATTGGCAAACTCTGTGCCAGAAGGGGACCGAGAGACTCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR-3UTR CAA 90 bp | GGGCCCAGGCATTGGGGAAGTCCCACTGCTGGCCTGTGTTACGAAGAGAGGTTGCAGATCCAGAAAGTTTaGCAGCATACCCTTCACTGT | + |
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Preference number: 3 (lower is better) Translates to: GPRHWGSPTAGLCYEERLQIQKV*QHTLHC Trigger: ACAGTGAAGGGTATGCTGCAAAACTTTCTGGATCTG...CAACCTCTCTTCGTAACACAGGCCAGCAGTGGGACTTCCCCAATGCCTGGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR TCA 72 bp | ACCATGAGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTaGGTCCATTCTTGTTCTTGTCACTGTAGCAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: TMSWGQGRKRRQ*VHSCSCHCSRR Trigger: TCTTCTGCTACAGTGACAAGAACAAGAATGGACTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR-3UTR CAA 90 bp | AACCATGAGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTGAGTCCATTCTTGTTCTACAACCTTGACCTCTaGGTCACTTCTTGGCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: NHELGPGEKAQAVSPFLFYNLDL*VTSWLR Trigger: TCTGAGCCAAGAAGTGACCAAGAGGTCAAGGTTGTA...GAACAAGAATGGACTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
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| 3UTR CCA 72 bp | GAAGTCCCACTGCTGGCCTGTGTTACGAAGAGAGGTTaGGATTCCATATTGGTAGGTCAAGATCTTGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: EVPLLACVTKRG*DSILVGQDLAV Trigger: GACAGCAAGATCTTGACCTACCAATATGGAATCCCAACCTCTCTTCGTAACACAGGCCAGCAGTGGGACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR CCA 72 bp | GCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTaGTCACTTCTTGGCTCAGGACACTATGAGCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: AQNTVKITVLTS*SLLGSGHYEQE Trigger: TTCCTGCTCATAGTGTCCTGAGCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
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| 3UTR TCA 72 bp | TCCACCGTTGCTGATGTCATACTTCTCAAACATCGCTaGCTTTTGGGAGTAGACTTTGAAGTTGGTTTTGAT | + |
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Preference number: 3 (lower is better) Translates to: STVADVILLKHR*LLGVDFEVGFD Trigger: ATCAAAACCAACTTCAAAGTCTACTCCCAAAAGTCAGCGATGTTTGAGAAGTATGACATCAGCAACGGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139389.8 ENSMUST00000150822.2 |
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| CDS-3UTR CCA 90 bp | CTAACTGGGTCCCTGAAGTCAACTGGTCACCATAGCGATCCAGAAGCATCAGGGGGTGGCAGGGCCTCCTaGGACCTAAGTCCCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LTGSLKSTGHHSDPEASGGGRAS*DLSPSP Trigger: GGGGCTGGGACTTAGGTCCCAGGAGGCCCTGCCACC...CCCTGATGCTTCTGGATCGCTATGGTGACCAGTTGACTTCAGGGACCCAGTTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| CDS-3UTR CCA 90 bp | AACCATGAGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTGAGTCCATTCTTGTTCAGATCTCTCACAGGGTaGTGGCAGGGCCTCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: NHELGPGEKAQAVSPFLFRSLTG*WQGLLG Trigger: TCCCAGGAGGCCCTGCCACCACCCTGTGAGAGATCT...GAACAAGAATGGACTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071219.12 |
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| CDS-3UTR CCA 90 bp | AACCATGAGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTGAGTCCATTCTTGTTCGGGATGCTGTGGTTGTaGACTGTGGCCAGCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: NHELGPGEKAQAVSPFLFGMLWL*TVASSL Trigger: CAGTGAGCTGGCCACAGTCCACAACCACAGCATCCC...GAACAAGAATGGACTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
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| CDS-3UTR CCA 90 bp | AACCATGAGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTGAGTCCATTCTTGTTCTCCTTGGGGATGCTGTaGTTGTGGACTGTGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: NHELGPGEKAQAVSPFLFSLGML*LWTVAS Trigger: GCTGGCCACAGTCCACAACCACAGCATCCCCAAGGA...GAACAAGAATGGACTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
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| CDS-3UTR TCA 90 bp | AACCATGAGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTGAGTCCATTCTTGTTCAGCAACACTAGGGTCTaGGAAGCAGCCAGCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: NHELGPGEKAQAVSPFLFSNTRV*EAASPK Trigger: CTTTGGGCTGGCTGCTTCTCAGACCCTAGTGTTGCT...GAACAAGAATGGACTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
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| CDS-3UTR GCA 90 bp | AACCATGAGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTGAGTCCATTCTTGTTCGCTGTTCCTTGGGGATaGTGTGGTTGTGGACTGTGG | + |
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Preference number: 4 (lower is better) Translates to: NHELGPGEKAQAVSPFLFAVPWG*CGCGLW Trigger: CCACAGTCCACAACCACAGCATCCCCAAGGAACAGC...GAACAAGAATGGACTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
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| CDS-3UTR CCA 90 bp | CCACTGCTGGCCTGTGTTACGAAGAGAGGTTGGGATTCCATATTGGTAGGTCAACTGGCTCTCACAGGGTaGTGGCAGGGCCTCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: PLLACVTKRGWDSILVGQLALTG*WQGLLG Trigger: TCCCAGGAGGCCCTGCCACCACCCTGTGAGAGCCAG...TTGACCTACCAATATGGAATCCCAACCTCTCTTCGTAACACAGGCCAGCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| CDS-3UTR CCA 90 bp | CCTCTGCTTGGCACAGGAACGCGTTCAGATCAGCGGGTACCATTTTGCTGGTTCGGGATGCTGTGGTTGTaGACTGTGGCCAGCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: PLLGTGTRSDQRVPFCWFGMLWL*TVASSL Trigger: CAGTGAGCTGGCCACAGTCCACAACCACAGCATCCC...GAACCAGCAAAATGGTACCCGCTGATCTGAACGCGTTCCTGTGCCAAGCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| 3UTR CAA 72 bp | CCCACAGAGTCTCTCGGTCCCCTTCTGGCACAGAGTTaGCCAATTCTGCGTCTTTCCTGTAGGACTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: PTESLGPLLAQS*PILRLSCRTLA Trigger: GGCCAGAGTCCTACAGGAAAGACGCAGAATTGGCAAACTCTGTGCCAGAAGGGGACCGAGAGACTCTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| CDS-3UTR TCA 90 bp | AACCATGAGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTGAGTCCATTCTTGTTCCATATCGATCCATCATaGGAGTCAGGAGTGGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: NHELGPGEKAQAVSPFLFHIDPS*ESGVGA Trigger: AGCCCCCACTCCTGACTCTCATGATGGATCGATATG...GAACAAGAATGGACTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
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| CDS-3UTR CCA 90 bp | GGGAAGCTAACTGGGTCCCTGAAGTCAACTGGTCACCATAGCGATCCAGAAGCATCCTTGGGGATGCTGTaGTTGTGGACTGTGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GKLTGSLKSTGHHSDPEASLGML*LWTVAS Trigger: GCTGGCCACAGTCCACAACCACAGCATCCCCAAGGA...TGCTTCTGGATCGCTATGGTGACCAGTTGACTTCAGGGACCCAGTTAGCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| CDS-3UTR CCA 90 bp | AACCATGAGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTGAGTCCATTCTTGTTCCCTGAAGCTGTTCCTTaGGGATGCTGTGGTTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: NHELGPGEKAQAVSPFLFPEAVP*GCCGCG Trigger: TCCACAACCACAGCATCCCCAAGGAACAGCTTCAGG...GAACAAGAATGGACTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
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| CDS-3UTR TCA 90 bp | CTGGTCACCATAGCGATCCAGAAGCATCAGGGCCAATCCGTTTGTCCAGCCAAATCCAACAAGCCAGCGTaGAGAGAAGTCCCAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LVTIAIQKHQGQSVCPAKSNKPA*REVPAR Trigger: TCTGGCTGGGACTTCTCTTCACGCTGGCTTGTTGGA...TTTGGCTGGACAAACGGATTGGCCCTGATGCTTCTGGATCGCTATGGTGACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150822.2 |
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| 3UTR CAA 72 bp | ATCCATCATGAGAGTCAGGAGTGGGGGCTGGCTCCGTaGCAGGTAATATATGCGTCCACCGTTGGGGATATG | + |
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Preference number: 4 (lower is better) Translates to: IHHESQEWGLAP*QVIYASTVGDM Trigger: CATATCCCCAACGGTGGACGCATATATTACCTGCAACGGAGCCAGCCCCCACTCCTGACTCTCATGATGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
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| CDS-3UTR TCA 90 bp | AACCATGAGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTGAGTCCATTCTTGTTCTGGAGATGTGGCCAGTaGCATATCCACAAACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NHELGPGEKAQAVSPFLFWRCGQ*HIHKLL Trigger: AAGCAGTTTGTGGATATGTCACTGGCCACATCTCCA...GAACAAGAATGGACTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
||
| CDS-3UTR CCA 90 bp | CACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTGGTGGCAGGGCCTCCTaGGACCTAAGTCCCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HFLAQNTVKITVLTSWSLGGRAS*DLSPSP Trigger: GGGGCTGGGACTTAGGTCCCAGGAGGCCCTGCCACC...AAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCCTGGCTCTCACAGGGTaGTGGCAGGGCCTCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LAQNTVKITVLTSWSLLGLALTG*WQGLLG Trigger: TCCCAGGAGGCCCTGCCACCACCCTGTGAGAGCCAG...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000139389.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGTCACCATAGCGATCCAGAAGCATCAGGGCCAATCCGTTTGTCCAGCCAACCTGAAGCTGTTCCTTaGGGATGCTGTGGTTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGHHSDPEASGPIRLSSQPEAVP*GCCGCG Trigger: TCCACAACCACAGCATCCCCAAGGAACAGCTTCAGG...TTGGCTGGACAAACGGATTGGCCCTGATGCTTCTGGATCGCTATGGTGACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
||
| CDS-3UTR CCA 90 bp | GCATCAGGGCCAATCCGTTTGTCCAGCCAAATCCTTCCTGAACTTCATACTCCCTGTAGGACTCTGGCCTaGGTCCCCCATAAGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: ASGPIRLSSQILPELHTPCRTLA*VPHKGH Trigger: ATGTCCCTTATGGGGGACCCAGGCCAGAGTCCTACA...GGGAGTATGAAGTTCAGGAAGGATTTGGCTGGACAAACGGATTGGCCCTGATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150822.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCCAATCCGTTTGTCCAGCCAAATCCTTCCTGAACTTCATACTCCCCTCTTTCCTGTAGGACTCTaGCCTGGGTCCCCCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGPIRLSSQILPELHTPLFPVGL*PGSPIR Trigger: CCTTATGGGGGACCCAGGCCAGAGTCCTACAGGAAA...GAGGGGAGTATGAAGTTCAGGAAGGATTTGGCTGGACAAACGGATTGGCCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150822.2 |
||
| CDS-3UTR TCA 90 bp | AACCATGAGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTGAGTCCATTCTTGTTCGATGTCCACCGTTGCTaGTGTCATACTTCTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: NHELGPGEKAQAVSPFLFDVHRC*CHTSQT Trigger: TGTTTGAGAAGTATGACATCAGCAACGGTGGACATC...GAACAAGAATGGACTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR GCA 90 bp | CCAGAAGCATCAGGGCCAATCCGTTTGTCCAGCCAAATCCTTCCTGAACTTCATGCTGTTCCTTGGGGATaGTGTGGTTGTGGACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PEASGPIRLSSQILPELHAVPWG*CGCGLW Trigger: CCACAGTCCACAACCACAGCATCCCCAAGGAACAGC...ATGAAGTTCAGGAAGGATTTGGCTGGACAAACGGATTGGCCCTGATGCTTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
||
| CDS-3UTR GCA 90 bp | AACCATGAGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTGAGTCCATTCTTGTTCTTCTGGCACAGAGTTTaGCAATTCTGCGTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NHELGPGEKAQAVSPFLFFWHRV*QFCVFP Trigger: AGGAAAGACGCAGAATTGGCAAACTCTGTGCCAGAA...GAACAAGAATGGACTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CCA 90 bp | CACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTGTGGGGCCCAGGCATTaGGGAAGTCCCACTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HFLAQNTVKITVLTSWSLVGPRH*GSPTAG Trigger: GCCAGCAGTGGGACTTCCCCAATGCCTGGGCCCCAC...AAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR TCA 90 bp | ATTCTGCGTCTTTCCTGTAGGACTCTGGCCTGGGTCCCCCATAAGGGACATAGTTGGAGATGTGGCCAGTaGCATATCCACAAACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILRLSCRTLAWVPHKGHSWRCGQ*HIHKLL Trigger: AAGCAGTTTGTGGATATGTCACTGGCCACATCTCCA...ACTATGTCCCTTATGGGGGACCCAGGCCAGAGTCCTACAGGAAAGACGCAGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
||
| CDS-3UTR TCA 90 bp | AACCATGAGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTGAGTCCATTCTTGTTCCTTCTCAAACATCGCTaGCTTTTGGGAGTAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: NHELGPGEKAQAVSPFLFLLKHR*LLGVDF Trigger: AAAGTCTACTCCCAAAAGTCAGCGATGTTTGAGAAG...GAACAAGAATGGACTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCCAATCCGTTTGTCCAGCCAAATCCTTCCTGAACTTCATACTCCCCTCATCAGTTCCTCTGCTTaGCACAGGAACGCGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGPIRLSSQILPELHTPLISSSA*HRNAFR Trigger: TCTGAACGCGTTCCTGTGCCAAGCAGAGGAACTGAT...GAGGGGAGTATGAAGTTCAGGAAGGATTTGGCTGGACAAACGGATTGGCCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150822.2 |
||
| CDS-3UTR CCA 90 bp | AACCATGAGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTGAGTCCATTCTTGTTCGTTACGAAGAGAGGTTaGGATTCCATATTGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NHELGPGEKAQAVSPFLFVTKRG*DSILVG Trigger: ACCTACCAATATGGAATCCCAACCTCTCTTCGTAAC...GAACAAGAATGGACTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CCA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCGCAGCCACTAGGCAGTaGGGTCCCAGGGAAGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LAQNTVKITVLTSWSLLGAATRQ*GPREAN Trigger: GTTAGCTTCCCTGGGACCCCACTGCCTAGTGGCTGC...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| 3UTR CAA 72 bp | CACCATAGCGATCCAGAAGCATCAGGGCCAATCCGTTaGTCCAGCCAAATCCTTCCTGAACTTCATACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HHSDPEASGPIR*SSQILPELHTP Trigger: GGGAGTATGAAGTTCAGGAAGGATTTGGCTGGACAAACGGATTGGCCCTGATGCTTCTGGATCGCTATGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139389.8 ENSMUST00000150822.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAGCTAACTGGGTCCCTGAAGTCAACTGGTCACCATAGCGATCCAGAAGCAAGAGTTTGCCAATTCTaGGTCTTTCCTGTAGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: GKLTGSLKSTGHHSDPEARVCQF*VFPVGL Trigger: GAGTCCTACAGGAAAGACGCAGAATTGGCAAACTCT...TGCTTCTGGATCGCTATGGTGACCAGTTGACTTCAGGGACCCAGTTAGCTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150822.2 |
||
| CDS-3UTR GCA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCCTAATGACCAGGTCCTaGAGTGGGGCCCAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LAQNTVKITVLTSWSLLGLMTRS*SGAQAL Trigger: CAATGCCTGGGCCCCACTGCAGGACCTGGTCATTAG...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CCA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCGGGATGCTGTGGTTGTaGACTGTGGCCAGCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LAQNTVKITVLTSWSLLGGMLWL*TVASSL Trigger: CAGTGAGCTGGCCACAGTCCACAACCACAGCATCCC...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCTCCTTGGGGATGCTGTaGTTGTGGACTGTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAQNTVKITVLTSWSLLGSLGML*LWTVAS Trigger: GCTGGCCACAGTCCACAACCACAGCATCCCCAAGGA...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCGCAGCCAGCCCAAAGTaGGGAGAGGTTGGAGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LAQNTVKITVLTSWSLLGAASPK*GEVGGI Trigger: TATCCCTCCAACCTCTCCCCACTTTGGGCTGGCTGC...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| 3UTR CAA 72 bp | GGAAGTCCCACTGCTGGCCTGTGTTACGAAGAGAGGTaGGGATTCCATATTGGTAGGTCAAGATCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSPTAGLCYEER*GFHIGRSRSCC Trigger: ACAGCAAGATCTTGACCTACCAATATGGAATCCCAACCTCTCTTCGTAACACAGGCCAGCAGTGGGACTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
||
| CDS-3UTR TCA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCATCTTCTGCAGGAACTaGGGGCTGTCCTTCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAQNTVKITVLTSWSLLGIFCRN*GLSFQS Trigger: GGACTGGAAGGACAGCCCTCAGTTCCTGCAGAAGAT...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
||
| CDS-3UTR TCA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCTCCAACAAGCCAGCGTaGAGAGAAGTCCCAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAQNTVKITVLTSWSLLGSNKPA*REVPAR Trigger: TCTGGCTGGGACTTCTCTTCACGCTGGCTTGTTGGA...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR TCA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCAGCAACACTAGGGTCTaGGAAGCAGCCAGCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAQNTVKITVLTSWSLLGSNTRV*EAASPK Trigger: CTTTGGGCTGGCTGCTTCTCAGACCCTAGTGTTGCT...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR GCA 90 bp | CACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTAATGACCAGGTCCTaGAGTGGGGCCCAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: HFLAQNTVKITVLTSWSLLMTRS*SGAQAL Trigger: CAATGCCTGGGCCCCACTGCAGGACCTGGTCATTAG...AAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CCA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCTGTAGGACTCTGGCCTaGGTCCCCCATAAGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LAQNTVKITVLTSWSLLGCRTLA*VPHKGH Trigger: ATGTCCCTTATGGGGGACCCAGGCCAGAGTCCTACA...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CCA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCTTTCCTGTAGGACTCTaGCCTGGGTCCCCCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAQNTVKITVLTSWSLLGFPVGL*PGSPIR Trigger: CCTTATGGGGGACCCAGGCCAGAGTCCTACAGGAAA...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CCA 90 bp | TCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTGCAGCCAGCCCAAAGTaGGGAGAGGTTGGAGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: SLLGSEHCENYSLDLLVTAASPK*GEVGGI Trigger: TATCCCTCCAACCTCTCCCCACTTTGGGCTGGCTGC...AGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR TCA 90 bp | TCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTATCTTCTGCAGGAACTaGGGGCTGTCCTTCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLGSEHCENYSLDLLVTIFCRN*GLSFQS Trigger: GGACTGGAAGGACAGCCCTCAGTTCCTGCAGAAGAT...AGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGCATCAGGGCCAATCCGTTTGTCCAGCCAAATCCTTCCTGAACTTCATAATAGCTTTGTCCTCCTaGGACTACAGAGACAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKHQGQSVCPAKSFLNFIIALSS*DYRDSP Trigger: AGGACTGTCTCTGTAGTCTCAGGAGGACAAAGCTAT...TATGAAGTTCAGGAAGGATTTGGCTGGACAAACGGATTGGCCCTGATGCTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150822.2 |
||
| CDS-3UTR TCA 90 bp | CACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTTCCAACAAGCCAGCGTaGAGAGAAGTCCCAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HFLAQNTVKITVLTSWSLSNKPA*REVPAR Trigger: TCTGGCTGGGACTTCTCTTCACGCTGGCTTGTTGGA...AAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CCA 90 bp | TCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTGTAGGACTCTGGCCTaGGTCCCCCATAAGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SLLGSEHCENYSLDLLVTCRTLA*VPHKGH Trigger: ATGTCCCTTATGGGGGACCCAGGCCAGAGTCCTACA...AGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CCA 90 bp | TCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTTTCCTGTAGGACTCTaGCCTGGGTCCCCCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLGSEHCENYSLDLLVTFPVGL*PGSPIR Trigger: CCTTATGGGGGACCCAGGCCAGAGTCCTACAGGAAA...AGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR TCA 90 bp | TCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTCATATCGATCCATCATaGGAGTCAGGAGTGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLGSEHCENYSLDLLVTHIDPS*ESGVGA Trigger: AGCCCCCACTCCTGACTCTCATGATGGATCGATATG...AGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCATCAGGGCCAATCCGTTTGTCCAGCCAAATCCTTCCTGAACTTCATATTCTGGCACAGAGTTTaGCAATTCTGCGTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKHQGQSVCPAKSFLNFIFWHRV*QFCVFP Trigger: AGGAAAGACGCAGAATTGGCAAACTCTGTGCCAGAA...TATGAAGTTCAGGAAGGATTTGGCTGGACAAACGGATTGGCCCTGATGCTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150822.2 |
||
| CDS-3UTR CCA 90 bp | CACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCCTGAAGCTGTTCCTTaGGGATGCTGTGGTTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HFLAQNTVKITVLTSWSLPEAVP*GCCGCG Trigger: TCCACAACCACAGCATCCCCAAGGAACAGCTTCAGG...AAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCGGTTCCTGTACTTTGTaGCCTCTGTGTCGTTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LAQNTVKITVLTSWSLLGGSCTL*PLCRSL Trigger: TAGGGAACGACACAGAGGCCACAAAGTACAGGAACC...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CCA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCGTTTTGATCCAATTCTaGGCCAGCTGGAAAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LAQNTVKITVLTSWSLLGVLIQF*ASWKAT Trigger: GGTGGCTTTCCAGCTGGCCCAGAATTGGATCAAAAC...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR TCA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCTGGAGATGTGGCCAGTaGCATATCCACAAACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAQNTVKITVLTSWSLLGWRCGQ*HIHKLL Trigger: AAGCAGTTTGTGGATATGTCACTGGCCACATCTCCA...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
||
| CDS-3UTR TCA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCATAGCTTTGTCCTCCTaGGACTACAGAGACAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAQNTVKITVLTSWSLLGIALSS*DYRDSP Trigger: AGGACTGTCTCTGTAGTCTCAGGAGGACAAAGCTAT...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR TCA 90 bp | CACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTACTGTAGCAGAAGACTaGGAAGAAGGGCAGCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: HFLAQNTVKITVLTSWSLTVAED*EEGQPL Trigger: TAGTGGCTGCCCTTCTTCTCAGTCTTCTGCTACAGT...AAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CCA 90 bp | CACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTATCAGTTCCTCTGCTTaGCACAGGAACGCGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HFLAQNTVKITVLTSWSLISSSA*HRNAFR Trigger: TCTGAACGCGTTCCTGTGCCAAGCAGAGGAACTGAT...AAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CCA 90 bp | TCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTATCAGTTCCTCTGCTTaGCACAGGAACGCGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLGSEHCENYSLDLLVTISSSA*HRNAFR Trigger: TCTGAACGCGTTCCTGTGCCAAGCAGAGGAACTGAT...AGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CCA 90 bp | TCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTGGTTCCTGTACTTTGTaGCCTCTGTGTCGTTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLLGSEHCENYSLDLLVTGSCTL*PLCRSL Trigger: TAGGGAACGACACAGAGGCCACAAAGTACAGGAACC...AGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CCA 90 bp | CACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTGTTTTGATCCAATTCTaGGCCAGCTGGAAAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: HFLAQNTVKITVLTSWSLVLIQF*ASWKAT Trigger: GGTGGCTTTCCAGCTGGCCCAGAATTGGATCAAAAC...AAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR TCA 90 bp | TCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTCATACCCTTCACTGTTaGGGCCATCTCAGAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLGSEHCENYSLDLLVTHTLHC*GHLRKK Trigger: CTTCTTTCTGAGATGGCCTCAACAGTGAAGGGTATG...AGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR TCA 90 bp | CACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCATACCCTTCACTGTTaGGGCCATCTCAGAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HFLAQNTVKITVLTSWSLHTLHC*GHLRKK Trigger: CTTCTTTCTGAGATGGCCTCAACAGTGAAGGGTATG...AAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR TCA 90 bp | TCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTATAGCTTTGTCCTCCTaGGACTACAGAGACAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLGSEHCENYSLDLLVTIALSS*DYRDSP Trigger: AGGACTGTCTCTGTAGTCTCAGGAGGACAAAGCTAT...AGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR GCA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCAGAGTTTGCCAATTCTaGGTCTTTCCTGTAGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LAQNTVKITVLTSWSLLGRVCQF*VFPVGL Trigger: GAGTCCTACAGGAAAGACGCAGAATTGGCAAACTCT...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CCA 90 bp | TCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTAAAGTGGGGAGAGGTTaGAGGGATAAAACTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLGSEHCENYSLDLLVTKVGRG*RDKTPG Trigger: ACCTGGAGTTTTATCCCTCCAACCTCTCCCCACTTT...AGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CCA 90 bp | CACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTAAAGTGGGGAGAGGTTaGAGGGATAAAACTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HFLAQNTVKITVLTSWSLKVGRG*RDKTPG Trigger: ACCTGGAGTTTTATCCCTCCAACCTCTCCCCACTTT...AAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR GCA 90 bp | CACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTGTAGCTGAGGACTTCTaGTTTCATCTTCTTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HFLAQNTVKITVLTSWSLVAEDF*FHLLSQ Trigger: CTGGGAAAGAAGATGAAAGCAGAAGTCCTCAGCTAC...AAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034609.11 |
||
| CDS-3UTR GCA 90 bp | CACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTTTCTGGCACAGAGTTTaGCAATTCTGCGTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HFLAQNTVKITVLTSWSLFWHRV*QFCVFP Trigger: AGGAAAGACGCAGAATTGGCAAACTCTGTGCCAGAA...AAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CCA 90 bp | TCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTCTTCATCTGGAGATGTaGCCAGTGACATATCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SLLGSEHCENYSLDLLVTLHLEM*PVTYPQ Trigger: TTGTGGATATGTCACTGGCCACATCTCCAGATGAAG...AGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCGTTACGAAGAGAGGTTaGGATTCCATATTGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAQNTVKITVLTSWSLLGVTKRG*DSILVG Trigger: ACCTACCAATATGGAATCCCAACCTCTCTTCGTAAC...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR TCA 90 bp | CACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTCTCAAACATCGCTaGCTTTTGGGAGTAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: HFLAQNTVKITVLTSWSLLLKHR*LLGVDF Trigger: AAAGTCTACTCCCAAAAGTCAGCGATGTTTGAGAAG...AAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS CCA 90 bp | TTGGTGCAGGAGCTCTCCATGGCAGTAGATCTGGCTCTCACAGGGTaGTGGCAGGGCCTCCTGGGACCTAAGTCCCAGCCCCAGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LVQELSMAVDLALTG*WQGLLGPKSQPQQK Trigger: CTTCTGCTGGGGCTGGGACTTAGGTCCCAGGAGGCCCTGCCACCACCCTGTGAGAGCCAGATCTACTGCCATGGAGAGCTCCTGCACCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000139389.8 |
||
| CDS CCA 90 bp | CTTGGTGCAGGAGCTCTCCATGGCAGTAGATCTCTCACAGGGTGGTaGCAGGGCCTCCTGGGACCTAAGTCCCAGCCCCAGCAGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGAGALHGSRSLTGW*QGLLGPKSQPQQKQ Trigger: CTGCTTCTGCTGGGGCTGGGACTTAGGTCCCAGGAGGCCCTGCCACCACCCTGTGAGAGATCTACTGCCATGGAGAGCTCCTGCACCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071219.12 |
||
| CDS CCA 90 bp | GAACTTGGTGCAGGAGCTCTCCATGGCAGTAGATCTCTCACAGGGTaGTGGCAGGGCCTCCTGGGACCTAAGTCCCAGCCCCAGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ELGAGALHGSRSLTG*WQGLLGPKSQPQQK Trigger: CTTCTGCTGGGGCTGGGACTTAGGTCCCAGGAGGCCCTGCCACCACCCTGTGAGAGATCTACTGCCATGGAGAGCTCCTGCACCAAGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071219.12 |
||
| CDS-3UTR CAA 90 bp | AACCATGAGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTGAGTCCATTCTTGTTCGACTCAGCCCCAGCCTaGAGCTCAGCCCACAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: NHELGPGEKAQAVSPFLFDSAPA*SSAHRV Trigger: GACTCTGTGGGCTGAGCTCAAGGCTGGGGCTGAGTC...GAACAAGAATGGACTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CAA 90 bp | AACCATGAGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTGAGTCCATTCTTGTTCCTGGGCCATCTGAACTaGGTGCAGGAGCTCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: NHELGPGEKAQAVSPFLFLGHLN*VQELSM Trigger: CATGGAGAGCTCCTGCACCAAGTTCAGATGGCCCAG...GAACAAGAATGGACTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTCACCATAGCGATCCAGAAGCATCAGGGCCAATCCGTTTGTCCAGCCAAAGACTCAGCCCCAGCCTaGAGCTCAGCCCACAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVTIAIQKHQGQSVCPAKDSAPA*SSAHRV Trigger: GACTCTGTGGGCTGAGCTCAAGGCTGGGGCTGAGTC...TTTGGCTGGACAAACGGATTGGCCCTGATGCTTCTGGATCGCTATGGTGACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150822.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGTCCCACTGCTGGCCTGTGTTACGAAGAGAGGTTGGGATTCCATATTGGTCTGGGCCATCTGAACTaGGTGCAGGAGCTCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GSPTAGLCYEERLGFHIGLGHLN*VQELSM Trigger: CATGGAGAGCTCCTGCACCAAGTTCAGATGGCCCAG...ACCAATATGGAATCCCAACCTCTCTTCGTAACACAGGCCAGCAGTGGGACTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
||
| CDS-3UTR CAA 90 bp | AACCATGAGCTGGGGCCAGGGGAGAAAGCGCAGGCAGTGAGTCCATTCTTGTTCAAACTGCTTGTCATCTaGGTAGAGCTGGGCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: NHELGPGEKAQAVSPFLFKLLVI*VELGHL Trigger: CAGATGGCCCAGCTCTACCAAGATGACAAGCAGTTT...GAACAAGAATGGACTCACTGCCTGCGCTTTCTCCCCTGGCCCCAGCTCATGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
||
| CDS-3UTR CAA 90 bp | CCACTGCTGGCCTGTGTTACGAAGAGAGGTTGGGATTCCATATTGGTAGGTCAATTGGGGATGCTGTGGTaGTGGACTGTGGCCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLLACVTKRGWDSILVGQLGMLW*WTVASS Trigger: TGAGCTGGCCACAGTCCACAACCACAGCATCCCCAA...TTGACCTACCAATATGGAATCCCAACCTCTCTTCGTAACACAGGCCAGCAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139389.8 |
||
| CDS-3UTR CAA 90 bp | TCAGGGCCAATCCGTTTGTCCAGCCAAATCCTTCCTGAACTTCATACTCCCCTCTCAGCGGGTACCATTTaGCTGGTTCGGATGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGPIRLSSQILPELHTPLSAGTI*LVRMLL Trigger: CAGCAGCATCCGAACCAGCAAAATGGTACCCGCTGA...GAGGGGAGTATGAAGTTCAGGAAGGATTTGGCTGGACAAACGGATTGGCCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150822.2 |
||
| CDS-3UTR CAA 90 bp | GCATCAGGGCCAATCCGTTTGTCCAGCCAAATCCTTCCTGAACTTCATACTCCCCATCAGTTCCTCTGCTaGGCACAGGAACGCGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ASGPIRLSSQILPELHTPHQFLC*AQERVQ Trigger: CTGAACGCGTTCCTGTGCCAAGCAGAGGAACTGATG...GGGAGTATGAAGTTCAGGAAGGATTTGGCTGGACAAACGGATTGGCCCTGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150822.2 |
||
| CDS-3UTR CAA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCGACTCAGCCCCAGCCTaGAGCTCAGCCCACAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LAQNTVKITVLTSWSLLGDSAPA*SSAHRV Trigger: GACTCTGTGGGCTGAGCTCAAGGCTGGGGCTGAGTC...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CAA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCCTGGGCCATCTGAACTaGGTGCAGGAGCTCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LAQNTVKITVLTSWSLLGLGHLN*VQELSM Trigger: CATGGAGAGCTCCTGCACCAAGTTCAGATGGCCCAG...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
||
| CDS-3UTR CAA 90 bp | CACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTTTGGGGATGCTGTGGTaGTGGACTGTGGCCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HFLAQNTVKITVLTSWSLLGMLW*WTVASS Trigger: TGAGCTGGCCACAGTCCACAACCACAGCATCCCCAA...AAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
||
| CDS-3UTR CAA 90 bp | TCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTTGGGGATGCTGTGGTaGTGGACTGTGGCCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLLGSEHCENYSLDLLVTLGMLW*WTVASS Trigger: TGAGCTGGCCACAGTCCACAACCACAGCATCCCCAA...AGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
||
| CDS-3UTR CAA 90 bp | TCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTGGGGGCTGGCTCCGTaGCAGGTAATATATGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLLGSEHCENYSLDLLVTWGLAP*QVIYAS Trigger: GGACGCATATATTACCTGCAACGGAGCCAGCCCCCA...AGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CAA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCTCAGCGGGTACCATTTaGCTGGTTCGGATGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LAQNTVKITVLTSWSLLGSAGTI*LVRMLL Trigger: CAGCAGCATCCGAACCAGCAAAATGGTACCCGCTGA...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CAA 90 bp | TCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCAGCGGGTACCATTTaGCTGGTTCGGATGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLGSEHCENYSLDLLVTSAGTI*LVRMLL Trigger: CAGCAGCATCCGAACCAGCAAAATGGTACCCGCTGA...AGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CAA 90 bp | CACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCATCAGTTCCTCTGCTaGGCACAGGAACGCGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: HFLAQNTVKITVLTSWSLHQFLC*AQERVQ Trigger: CTGAACGCGTTCCTGTGCCAAGCAGAGGAACTGATG...AAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CAA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCTCAGGGCCAATCCGTTaGTCCAGCCAAATCCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LAQNTVKITVLTSWSLLGSGPIR*SSQILP Trigger: AGGAAGGATTTGGCTGGACAAACGGATTGGCCCTGA...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CAA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCAAACTGCTTGTCATCTaGGTAGAGCTGGGCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LAQNTVKITVLTSWSLLGKLLVI*VELGHL Trigger: CAGATGGCCCAGCTCTACCAAGATGACAAGCAGTTT...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
||
| CDS-3UTR CAA 90 bp | TCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCAGGGCCAATCCGTTaGTCCAGCCAAATCCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLGSEHCENYSLDLLVTSGPIR*SSQILP Trigger: AGGAAGGATTTGGCTGGACAAACGGATTGGCCCTGA...AGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CAA 90 bp | TCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTCCTGGATGTCCACCGTaGCTGATGTCATACTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLLGSEHCENYSLDLLVTPGCPP*LMSYFS Trigger: TGAGAAGTATGACATCAGCAACGGTGGACATCCAGG...AGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CAA 90 bp | TTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTTCTTGGCCAGATCCAGAAAGTTTaGCAGCATACCCTTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LAQNTVKITVLTSWSLLGQIQKV*QHTLHC Trigger: ACAGTGAAGGGTATGCTGCAAAACTTTCTGGATCTG...GCCAAGAAGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS-3UTR CAA 90 bp | TCACTTCTTGGCTCAGAACACTGTGAAAATTACAGTCTTGACCTCTTGGTCACTCAGATCCAGAAAGTTTaGCAGCATACCCTTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLLGSEHCENYSLDLLVTQIQKV*QHTLHC Trigger: ACAGTGAAGGGTATGCTGCAAAACTTTCTGGATCTG...AGTGACCAAGAGGTCAAGACTGTAATTTTCACAGTGTTCTGAGCCAAGAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
||
| CDS CCA 72 bp | GAGCTCTCCATGGCAGTAGATCTGGCTCTCACAGGGTaGTGGCAGGGCCTCCTGGGACCTAAGTCCCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ELSMAVDLALTG*WQGLLGPKSQP Trigger: GGGCTGGGACTTAGGTCCCAGGAGGCCCTGCCACCACCCTGTGAGAGCCAGATCTACTGCCATGGAGAGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000139389.8 |
||
| CDS CCA 72 bp | GGAGCTCTCCATGGCAGTAGATCTCTCACAGGGTGGTaGCAGGGCCTCCTGGGACCTAAGTCCCAGCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GALHGSRSLTGW*QGLLGPKSQPQ Trigger: CTGGGGCTGGGACTTAGGTCCCAGGAGGCCCTGCCACCACCCTGTGAGAGATCTACTGCCATGGAGAGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071219.12 |
||
| CDS CCA 72 bp | GCAGGAGCTCTCCATGGCAGTAGATCTCTCACAGGGTaGTGGCAGGGCCTCCTGGGACCTAAGTCCCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AGALHGSRSLTG*WQGLLGPKSQP Trigger: GGGCTGGGACTTAGGTCCCAGGAGGCCCTGCCACCACCCTGTGAGAGATCTACTGCCATGGAGAGCTCCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071219.12 |
||
| CDS TCA 72 bp | TGGGGATGCTGTGGTTGTGGACTGTGGCCAGCTCACTaGACTTCTGCAGGACTTCATCTGGAGATGTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: WGCCGCGLWPAH*TSAGLHLEMWP Trigger: TGGCCACATCTCCAGATGAAGTCCTGCAGAAGTTCAGTGAGCTGGCCACAGTCCACAACCACAGCATCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
||
| CDS CAA 72 bp | CTGCTTGTCATCTTGGTAGAGCTGGGCCATCTGAACTaGGTGCAGGAGCTCTCCATGGCAGTAGATCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLVILVELGHLN*VQELSMAVDLA Trigger: AGCCAGATCTACTGCCATGGAGAGCTCCTGCACCAAGTTCAGATGGCCCAGCTCTACCAAGATGACAAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000139389.8 |
||
| CDS CAA 90 bp | ATCCACAAACTGCTTGTCATCTTGGTAGAGCTGGGCCATCTGAACTaGGTGCAGGAGCTCTCCATGGCAGTAGATCTGGCTCTCACAGGG | + |
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Preference number: 6 (lower is better) Translates to: IHKLLVILVELGHLN*VQELSMAVDLALTG Trigger: CCCTGTGAGAGCCAGATCTACTGCCATGGAGAGCTCCTGCACCAAGTTCAGATGGCCCAGCTCTACCAAGATGACAAGCAGTTTGTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000139389.8 |
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| CDS CAA 72 bp | CTGCTTGTCATCTTGGTAGAGCTGGGCCATCTGAACTaGGTGCAGGAGCTCTCCATGGCAGTAGATCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: LLVILVELGHLN*VQELSMAVDLS Trigger: TGAGAGATCTACTGCCATGGAGAGCTCCTGCACCAAGTTCAGATGGCCCAGCTCTACCAAGATGACAAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071219.12 |
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| CDS CAA 90 bp | ATCCACAAACTGCTTGTCATCTTGGTAGAGCTGGGCCATCTGAACTaGGTGCAGGAGCTCTCCATGGCAGTAGATCTCTCACAGGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: IHKLLVILVELGHLN*VQELSMAVDLSQGG Trigger: ACCACCCTGTGAGAGATCTACTGCCATGGAGAGCTCCTGCACCAAGTTCAGATGGCCCAGCTCTACCAAGATGACAAGCAGTTTGTGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071219.12 |
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| CDS TCA 72 bp | GCTTTGAGTAGATTAGGGAGGACCTCTCGGGGTAGCTaGGGACTTCTGCTTTCATCTTCTTTCCCAGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: ALSRLGRTSRGS*GLLLSSSFPAF Trigger: AAAAGCTGGGAAAGAAGATGAAAGCAGAAGTCCTCAGCTACCCCGAGAGGTCCTCCCTAATCTACTCAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034609.11 |
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| CDS TCA 72 bp | CAGATCCAGAAAGTTTTGCAGCATACCCTTCACTGTTaGGGCCATCTCAGAAAGAAGCAGGCCTTCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: QIQKVLQHTLHC*GHLRKKQAFHH Trigger: GTGATGGAAGGCCTGCTTCTTTCTGAGATGGCCTCAACAGTGAAGGGTATGCTGCAAAACTTTCTGGATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 |
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| CDS TCA 72 bp | GAACTTCTGCAGGACTTCATCTGGAGATGTGGCCAGTaGCATATCCACAAACTGCTTGTCATCTTGGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: ELLQDFIWRCGQ*HIHKLLVILVE Trigger: CTCTACCAAGATGACAAGCAGTTTGTGGATATGTCACTGGCCACATCTCCAGATGAAGTCCTGCAGAAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034609.11 ENSMUST00000071219.12 ENSMUST00000139389.8 |
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