Pregenerated sensors for TRDV4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000076867

Ensembl transcript IDs: ENSMUST00000103679.3

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 72 bp	TCATATGATAATTCTTCATGTCCCCTCCTGTTACAGTaGAGTAGAAGGAGGCAGGATCCCCAGCTACAACAG	+
Preference number: 6 (lower is better) Translates to: SYDNSSCPLLLQ*SRRRQDPQLQQ Trigger: CTGTTGTAGCTGGGGATCCTGCCTCCTTCTACTGCACTGTAACAGGAGGGGACATGAAGAATTATCATATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103679.3
CDS CAA 90 bp	CCTTTGAGGTTGCTCTTTCCACCATCAGTAGAATTGCTATTTAGCTaGTATACTAAAAACAGAGCATTAGTTCCATTCTTCTTATACCAG	+
Preference number: 6 (lower is better) Translates to: PLRLLFPPSVELLFS*YTKNRALVPFFLYQ Trigger: CTGGTATAAGAAGAATGGAACTAATGCTCTGTTTTTAGTATACAAGCTAAATAGCAATTCTACTGATGGTGGAAAGAGCAACCTCAAAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103679.3
CDS CAA 72 bp	TTCCCTTTGAGGTTGCTCTTTCCACCATCAGTAGAATaGCTATTTAGCTTGTATACTAAAAACAGAGCATTA	+
Preference number: 6 (lower is better) Translates to: FPLRLLFPPSVE*LFSLYTKNRAL Trigger: TAATGCTCTGTTTTTAGTATACAAGCTAAATAGCAATTCTACTGATGGTGGAAAGAGCAACCTCAAAGGGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103679.3

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