Pregenerated sensors for TRDN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019787Ensembl transcript IDs: ENSMUST00000095762.5, ENSMUST00000217779.2, ENSMUST00000218281.2, ENSMUST00000219211.2, ENSMUST00000219665.2, ENSMUST00000219931.2, ENSMUST00000219982.2
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTTTGCCTGTGCCACCGTaGACAAAAGAGAACATTCCA | + |
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Preference number: 2 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVLPVPP*TKENIP Trigger: TGGAATGTTCTCTTTTGTCCACGGTGGCACAGGCAA...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| 3UTR CAA 90 bp | TTGAAACCAATCACACAGCTAGTTCACAAAGTCAGTAGCTCAGCATaGGCTGAGCTTATGATAGTGCCAGAAATGGTAACTCAAGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: LKPITQLVHKVSSSA*AELMIVPEMVTQVV Trigger: AACAACTTGAGTTACCATTTCTGGCACTATCATAAGCTCAGCCAATGCTGAGCTACTGACTTTGTGAACTAGCTGTGTGATTGGTTTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| 3UTR-3UTR TCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTCTGAGTCTACCCACATaGTGCAGAAGAATAACTTTT | + |
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Preference number: 2 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVLSLPT*CRRITF Trigger: AAAAGTTATTCTTCTGCATCATGTGGGTAGACTCAG...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| 3UTR-3UTR TCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGGATCCTTGCCATAACTaGACTAGAAACAGACGTGAA | + |
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Preference number: 2 (lower is better) Translates to: IDKMDFCLRPQELCLAAVDPCHN*TRNRRE Trigger: TTCACGTCTGTTTCTAGTTCAGTTATGGCAAGGATC...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| 3UTR-3UTR CCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTCTCAAGAACTATGTTTaGCTGCAGTGTTTGAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVLKNYV*LQCLKP Trigger: TGGTTTCAAACACTGCAGCCAAACATAGTTCTTGAG...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| 3UTR-3UTR GCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTCCAAATGTGCTTAATTaGAATGTCCACAAGAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVPNVLN*NVHKRE Trigger: TTCTCTCTTGTGGACATTGCAATTAAGCACATTTGG...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| 3UTR-3UTR CCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTCTGCCATCATTTAACTaGCATTACTGTTCAATTAGC | + |
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Preference number: 2 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVLPSFN*HYCSIS Trigger: GCTAATTGAACAGTAATGCCAGTTAAATGATGGCAG...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| 3UTR CAA 90 bp | AATATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTaGGCTGCAGTGTTTGAAACCAATCACACAGCTAGTTCACAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: NIDKMDFCLRPQELC*AAVFETNHTASSQS Trigger: ACTTTGTGAACTAGCTGTGTGATTGGTTTCAAACACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAATATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| 3UTR-3UTR GCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGGACCCTGAACACAATTaGTTATTAGTCAATTCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: IDKMDFCLRPQELCLAAVDPEHN*LLVNSF Trigger: AAAGGAATTGACTAATAAGCAATTGTGTTCAGGGTC...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| 3UTR-3UTR CCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTCTCATGAACATGTATaGACCCAAAATATCTCACTT | + |
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Preference number: 2 (lower is better) Translates to: IDKMDFCLRPQELCLAAVSHEHV*TQNISL Trigger: AAGTGAGATATTTTGGGTCCATACATGTTCATGAGA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| 3UTR TCA 72 bp | ACTTTATCCACTGTTCTCCTTGTAAGTTTGAATTGTTaGATGAAGCTCTGGTCAATTATGTACTCCTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: TLSTVLLVSLNC*MKLWSIMYSFP Trigger: GGGGAAGGAGTACATAATTGACCAGAGCTTCATTCAACAATTCAAACTTACAAGGAGAACAGTGGATAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| 3UTR CCA 72 bp | AAAGTCACCGATATCCCATCGTTAATGCTAAGTACATaGTCCATATCCTACCTGAATATTGATAAAATGGAC | + |
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Preference number: 3 (lower is better) Translates to: KVTDIPSLMLST*SISYLNIDKMD Trigger: GTCCATTTTATCAATATTCAGGTAGGATATGGACCATGTACTTAGCATTAACGATGGGATATCGGTGACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| 3UTR TCA 72 bp | GGTGTAAGATATACCTATGTAGATCCTTGCCATAACTaGACTAGAAACAGACGTGAATATAATGATGCACAT | + |
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Preference number: 3 (lower is better) Translates to: GVRYTYVDPCHN*TRNRREYNDAH Trigger: ATGTGCATCATTATATTCACGTCTGTTTCTAGTTCAGTTATGGCAAGGATCTACATAGGTATATCTTACACC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| 3UTR GCA 72 bp | TTATTAGTCAATTCCTTTGTCTATGTCATCTCTTTATaGCAGGCAAAATGTTTACAATGGAATCTCAGCATC | + |
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Preference number: 3 (lower is better) Translates to: LLVNSFVYVISL*QAKCLQWNLSI Trigger: GATGCTGAGATTCCATTGTAAACATTTTGCCTGGCATAAAGAGATGACATAGACAAAGGAATTGACTAATAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR GCA 90 bp | CCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTACCCCATTCTCTTTGGACCTCCTaGTGTCTCCTCCTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PMVVLPFRLVGLDLFLPHSLWTS*CLLLLE Trigger: TTCCAGGAGGAGGAGACAGCAGGAGGTCCAAAGAGA...ATGGGGTAAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
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| CDS-3UTR GCA 90 bp | GTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTACCCCATCTGAGGTTACCTTTCTGCTCATaGACAGCTGGCATCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VVLPFRLVGLDLFLPHLRLPFCS*TAGISL Trigger: CAAAGAGATGCCAGCTGTGCATGAGCAGAAAGGTAA...CCTCAGATGGGGTAAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
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| CDS-3UTR TCA 90 bp | AGTATGTTAATACCCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTTCACAATGTCTTCGGTaGCAGACCTCTTCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SMLIPNGSTSFQACWLGSSQCLR*QTSSAP Trigger: AGGTGCTGAAGAGGTCTGTCACCGAAGACATTGTGA...AGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGGGTATTAACATACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
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| CDS-3UTR TCA 90 bp | GTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTACCCCATCTGAGGTCAAGTTTCTCTTTGTaGGTTGCTGTCTTCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VVLPFRLVGLDLFLPHLRSSFSL*VAVFSG Trigger: ACCTGAGAAGACAGCAACTCACAAAGAGAAACTTGA...CCTCAGATGGGGTAAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
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| CDS-3UTR GCA 90 bp | TTAATACCCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTGACAAGAAGCCAGGCTaGAGGGGAGCTGAATGTTGT | + |
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Preference number: 4 (lower is better) Translates to: LIPNGSTSFQACWLGSLFDKKPG*RGAECC Trigger: ACAACATTCAGCTCCCCTGCAGCCTGGCTTCTTGTC...AAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGGGTATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
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| CDS-3UTR CCA 90 bp | CCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTACCCCATTGTCATCCTTCTTTCTaGCCTTTGGTGGTGTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: PMVVLPFRLVGLDLFLPHCHPSF*PLVVFS Trigger: CGAAAACACCACCAAAGGCCAGAAAGAAGGATGACA...ATGGGGTAAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
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| CDS-3UTR TCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTAGGCTGCAGGGGAGCTaGATGTTGTCACAATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVRLQGS*MLSQCL Trigger: AAGACATTGTGACAACATTCAGCTCCCCTGCAGCCT...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR TCA 90 bp | TTAATACCCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTAGGCTGCAGGGGAGCTaGATGTTGTCACAATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LIPNGSTSFQACWLGSLFRLQGS*MLSQCL Trigger: AAGACATTGTGACAACATTCAGCTCCCCTGCAGCCT...AAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGGGTATTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
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| CDS-3UTR GCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGGACAAGAAGCCAGGCTaGAGGGGAGCTGAATGTTGT | + |
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Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVDKKPG*RGAECC Trigger: ACAACATTCAGCTCCCCTGCAGCCTGGCTTCTTGTC...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR GCA 90 bp | TACCCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTACCCTTTCTTGTCCTCTTTTaGCATCATCTTCGTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: YPMVVLPFRLVGLDLFLPFLVLF*HHLRLW Trigger: CCAGAGACGAAGATGATGGCAAAAGAGGACAAGAAA...GGGTAAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
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| CDS-3UTR GCA 90 bp | AATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTACCCCATCTGAATGTTTACCTTTCTaGTCATGCACAGCTGGCATC | + |
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Preference number: 4 (lower is better) Translates to: NGSTSFQACWLGSLFTPSECLPF*SCTAGI Trigger: GATGCCAGCTGTGCATGAGCAGAAAGGTAAACATTC...AGATGGGGTAAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
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| CDS-3UTR CCA 90 bp | AGTATGTTAATACCCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTGCTGTCTCCTCCTCCTaGAATGTTTACCTTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SMLIPNGSTSFQACWLGSAVSSS*NVYLSA Trigger: AGCAGAAAGGTAAACATTCCAGGAGGAGGAGACAGC...AGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGGGTATTAACATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
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| 3UTR CAA 72 bp | ATCACACAGCTAGTTCACAAAGTCAGTAGCTCAGCATaGGCTGAGCTTATGATAGTGCCAGAAATGGTAACT | + |
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Preference number: 4 (lower is better) Translates to: ITQLVHKVSSSA*AELMIVPEMVT Trigger: AGTTACCATTTCTGGCACTATCATAAGCTCAGCCAATGCTGAGCTACTGACTTTGTGAACTAGCTGTGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR TCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTCACAATGTCTTCGGTaGCAGACCTCTTCAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVSQCLR*QTSSAP Trigger: AGGTGCTGAAGAGGTCTGTCACCGAAGACATTGTGA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR TCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTTCAAGGGCCGTTGTTaGCAAAGCAGGTTTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVFKGRC*QSRFGR Trigger: CCTTCCAAACCTGCTTTGTCAACAACGGCCCTTGAA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR TCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTAATCTTCTTCTTCCCTaGGTCTGGAACTTCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVNLLLP*VWNFWC Trigger: GCACCAGAAGTTCCAGACTCAGGGAAGAAGAAGATT...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR TCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTGTTGTTGGACAGGAGTaGCAGGAAACTGAAACCCAT | + |
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Preference number: 4 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVVVGQE*QETETH Trigger: ATGGGTTTCAGTTTCCTGTCACTCCTGTCCAACAAC...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR GCA 90 bp | CCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTACCCCATATCAATGTCTTCATCTaGATCCTCATCATCTTCGTC | + |
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Preference number: 4 (lower is better) Translates to: PMVVLPFRLVGLDLFLPHINVFI*ILIIFV Trigger: GACGAAGATGATGAGGATGCAGATGAAGACATTGAT...ATGGGGTAAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
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| CDS-3UTR GCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTTGGTTTCAGGAGGTTTaGCTGGTTCTTTGCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVWFQEV*LVLCLS Trigger: GGAAAGGCAAAGAACCAGGCAAACCTCCTGAAACCA...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR CCA 90 bp | TACCCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTACCCAGCCAATCTTGGCAATaGAGCTTGCTGAAAAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: YPMVVLPFRLVGLDLFLPSQSWQ*SLLKSF Trigger: AAAACTTTTCAGCAAGCTCCATTGCCAAGATTGGCT...GGGTAAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGGGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
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| CDS-3UTR CCA 90 bp | ATACCCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTACCCTTTCTGGCCTTTGGTaGTGTTTTCGGAGTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: IPNGSTSFQACWLGSLFTLSGLW*CFRSFF Trigger: AAAGAAACTCCGAAAACACCACCAAAGGCCAGAAAG...GGTAAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGGGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
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| 3UTR CAA 72 bp | GTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTTaGAAACCAATCACACAGCTAGTTCACAAAGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: VLDLKNYVWLQC*KPITQLVHKVS Trigger: ACTGACTTTGTGAACTAGCTGTGTGATTGGTTTCAAACACTGCAGCCAAACATAGTTCTTGAGGTCTAAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR TCA 90 bp | CCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTACCCCATCTCCCTTTCTCTGTGTaGAGCTTTAGTTTGTATTTT | + |
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Preference number: 4 (lower is better) Translates to: PMVVLPFRLVGLDLFLPHLPFSV*SFSLYF Trigger: AAAATACAAACTAAAGCTTCACACAGAGAAAGGGAG...ATGGGGTAAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
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| CDS-3UTR TCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTCGACAGAATGCATACTaGTCTTTCTGCTCATGCACA | + |
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Preference number: 4 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVRQNAY*SFCSCT Trigger: TGTGCATGAGCAGAAAGATCAGTATGCATTCTGTCG...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR TCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTTTGGAAGGTGTCAATaGTGGTGGTGGCATAACTGG | + |
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Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVFGRCQ*WWWHNW Trigger: CCAGTTATGCCACCACCATCATTGACACCTTCCAAA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR TCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTTTCTGGTGCTCCCTTTaGAGATGGTTTAGGCTTATC | + |
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Preference number: 4 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVFWCSL*RWFRLI Trigger: GATAAGCCTAAACCATCTTCAAAGGGAGCACCAGAA...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR CCA 90 bp | AGTATGTTAATACCCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTTGTCTATCACCGTTGTaGTTGTCGATGCATTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SMLIPNGSTSFQACWLGSCLSPL*LSMHFL Trigger: AAGGAAATGCATCGACAACCACAACGGTGATAGACA...AGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGGGTATTAACATACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
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| CDS-3UTR CCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTGATCTGAGCCAATCTTaGCAATGGAGCTTGCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVDLSQS*QWSLLK Trigger: TTTCAGCAAGCTCCATTGCCAAGATTGGCTCAGATC...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR CCA 90 bp | AATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTACCCCATCTTTTTCGGAGTTTCTTTaGCTTTTGCAGCTGTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: NGSTSFQACWLGSLFTPSFSEFL*LLQLLV Trigger: AACCAACAGCTGCAAAAGCCAAAGAAACTCCGAAAA...AGATGGGGTAAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
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| CDS-3UTR CCA 90 bp | TTAATACCCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTCTTCTTTCTGGCCTTTaGTGGTGTTTTCGGAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LIPNGSTSFQACWLGSLFLLSGL*WCFRSF Trigger: GAAACTCCGAAAACACCACCAAAGGCCAGAAAGAAG...AAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGGGTATTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
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| CDS-3UTR CCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTTCAGGAGGTTTGCCTaGTTCTTTGCCTTTCCCATC | + |
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Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVFRRFA*FFAFPI Trigger: GATGGGAAAGGCAAAGAACCAGGCAAACCTCCTGAA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR CCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTGGCGGTCATTTGTTTaGTTTCAGGAGGTTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVWRSFV*FQEVCL Trigger: CAGGCAAACCTCCTGAAACCAAACAAATGACCGCCA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGCTTCTTTCTGGCCTTTaGTGGTGTTTTCGGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVLLSGL*WCFRSF Trigger: GAAACTCCGAAAACACCACCAAAGGCCAGAAAGAAG...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTGTCATCCTTCTTTCTaGCCTTTGGTGGTGTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVCHPSF*PLVVFS Trigger: CGAAAACACCACCAAAGGCCAGAAAGAAGGATGACA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTTTCAAGTACACACATTaGAAGAAGCTGATGGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVFKYTH*KKLMGR Trigger: ACGTCCCATCAGCTTCTTCCAATGTGTGTACTTGAA...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| 3UTR CAA 72 bp | TACCCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTaGGATCTCTTTTTACCCCATCTGAGGTTTAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: YPMVVLPFRLVG*DLFLPHLRFNF Trigger: AAAATTAAACCTCAGATGGGGTAAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
||
| CDS-3UTR TCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTCAAGTTTCTCTTTGTaGGTTGCTGTCTTCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVSSFSL*VAVFSG Trigger: ACCTGAGAAGACAGCAACTCACAAAGAGAAACTTGA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR GCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTTTCTTGTCCTCTTTTaGCATCATCTTCGTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVFLVLF*HHLRLW Trigger: CCAGAGACGAAGATGATGGCAAAAGAGGACAAGAAA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTGTCTATCACCGTTGTaGTTGTCGATGCATTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVCLSPL*LSMHFL Trigger: AAGGAAATGCATCGACAACCACAACGGTGATAGACA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTAGCCAATCTTGGCAATaGAGCTTGCTGAAAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVSQSWQ*SLLKSF Trigger: AAAACTTTTCAGCAAGCTCCATTGCCAAGATTGGCT...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTTTTTCGGAGTTTCTTTaGCTTTTGCAGCTGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVFSEFL*LLQLLV Trigger: AACCAACAGCTGCAAAAGCCAAAGAAACTCCGAAAA...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGCTTTCTGGCCTTTGGTaGTGTTTTCGGAGTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVLSGLW*CFRSFF Trigger: AAAGAAACTCCGAAAACACCACCAAAGGCCAGAAAG...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGCTTGCTCGACTGTCTTaGCTTTCTCTTCTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVLARLS*LSLLSF Trigger: GAAAGAAAGAAGAGAAAGCCAAGACAGTCGAGCAAG...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR TCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGGGCAATGGAGCTTGCTaGAAAGTTTTTATAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVGNGAC*KVFIIH Trigger: GTGGATTATAAAAACTTTTCAGCAAGCTCCATTGCC...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR TCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTCTCCCTTTCTCTGTGTaGAGCTTTAGTTTGTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVLPFSV*SFSLYF Trigger: AAAATACAAACTAAAGCTTCACACAGAGAAAGGGAG...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR TCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTTTCTTTATCTTTCTTTaGAGCTGGTGCTTCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVFFIFL*SWCFFG Trigger: TCCAAAGAAGCACCAGCTTCAAAGAAAGATAAAGAA...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR GCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGATCAATGTCTTCATCTaGATCCTCATCATCTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVINVFI*ILIIFV Trigger: GACGAAGATGATGAGGATGCAGATGAAGACATTGAT...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR TCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGGTCACATTGTACACCTaGAGATTTTCTTCTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVVTLYT*RFSSLV Trigger: AACAAGAGAAGAAAATCTTCAGGTGTACAATGTGAC...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR TCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTGTTTGCTTCTTTGGTaGAGATACATCATCAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVCLLLW*RYIISY Trigger: GTAACTGATGATGTATCTTCACCAAAGAAGCAAACA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR GCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTTTCTCTTTGTGAGTTaGTGTCTTCTCAGGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVFLFVS*CLLRFF Trigger: GAAAAACCTGAGAAGACAGCAACTCACAAAGAGAAA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR GCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGCATATATCGACAGAATaGATACTGATCTTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVHISTE*ILIFLL Trigger: GAGCAGAAAGATCAGTATGCATTCTGTCGATATATG...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR GCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTTTTTCCAGGTTTTTCTaGTTTAGTCACATTGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVFSRFF*FSHIVH Trigger: GTGTACAATGTGACTAAAGCAGAAAAACCTGGAAAA...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 37% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR CCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTGGTTTTAAATCCCCATaGACAAACATGTCAATCATA | + |
|
Preference number: 4 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVGFKSP*TNMSII Trigger: TATGATTGACATGTTTGTCCATGGGGATTTAAAACC...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR CCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTTTTGAGTTTTTCACTTaGACCTGGATGTTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVFEFFT*TWMFLF Trigger: AAAAAGGAACATCCAGGTCCAAGTGAAAAACTCAAA...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR CCA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTAATGTGGGACATCTTTaGAGTCTTCTTTATCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVNVGHL*SLLYLS Trigger: AGAAAGATAAAGAAGACTCCAAAGATGTCCCACATT...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR CCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGGTGTTCAGCTTTTTCTaGTTTAACATGAGGAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVVFSFF*FNMRNN Trigger: GTTATTCCTCATGTTAAACCAGAAAAAGCTGAACAC...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS-3UTR CCA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGAAGCTGGTGCTTCTTTaGAATCTTTTGGTATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IDKMDFCLRPQELCLAAVKLVLL*NLLVFF Trigger: GAAAAATACCAAAAGATTCCAAAGAAGCACCAGCTT...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS GCA 90 bp | ACCTCCTGCTGTCTCCTCCTCCTGGAATGTTTACCTTTCTGCTCATaGACAGCTGGCATCTCTTTGTCATCCTTCTTTCTGGCCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TSCCLLLLECLPFCS*TAGISLSSFFLAFG Trigger: ACCAAAGGCCAGAAAGAAGGATGACAAAGAGATGCCAGCTGTGCATGAGCAGAAAGGTAAACATTCCAGGAGGAGGAGACAGCAGGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
||
| CDS GCA 90 bp | GAAGGTGTCAATGATGGTGGTGGCATAACTGGGCTTTGTCCTTTCTaGTCATGCACAGCTGGCATCTCTTTGTCATCCTTCTTTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EGVNDGGGITGLCPF*SCTAGISLSSFFLA Trigger: GGCCAGAAAGAAGGATGACAAAGAGATGCCAGCTGTGCATGAGCAGAAAGGACAAAGCCCAGTTATGCCACCACCATCATTGACACCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219665.2 ENSMUST00000219931.2 |
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| CDS GCA 90 bp | GTCAATGATGGTGGTGGCATAACTGGGCTTTGTCCTTTCTGCTCATaGACAGCTGGCATCTCTTTGTCATCCTTCTTTCTGGCCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VNDGGGITGLCPFCS*TAGISLSSFFLAFG Trigger: ACCAAAGGCCAGAAAGAAGGATGACAAAGAGATGCCAGCTGTGCATGAGCAGAAAGGACAAAGCCCAGTTATGCCACCACCATCATTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219665.2 ENSMUST00000219931.2 |
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| CDS CCA 90 bp | CTTTCTGCTCATGCACAGCTGGCATCTCTTTGTCATCCTTCTTTCTaGCCTTTGGTGGTGTTTTCGGAGTTTCTTTGGCTTTTGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSAHAQLASLCHPSF*PLVVFSEFLWLLQL Trigger: CAGCTGCAAAAGCCAAAGAAACTCCGAAAACACCACCAAAGGCCAGAAAGAAGGATGACAAAGAGATGCCAGCTGTGCATGAGCAGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000219211.2 ENSMUST00000219665.2 ENSMUST00000219931.2 ENSMUST00000219982.2 |
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| CDS-3UTR CAA 90 bp | GTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTACCCCATCTGAGGGGATCTGAGCCAATCTaGGCAATGGAGCTTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VVLPFRLVGLDLFLPHLRGSEPI*AMELAE Trigger: TTCAGCAAGCTCCATTGCCAAGATTGGCTCAGATCC...CCTCAGATGGGGTAAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
||
| CDS CCA 90 bp | ATGCACAGCTGGCATCTCTTTGTCATCCTTCTTTCTGGCCTTTGGTaGTGTTTTCGGAGTTTCTTTGGCTTTTGCAGCTGTTGGTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: MHSWHLFVILLSGLW*CFRSFFGFCSCWFH Trigger: GTGAAACCAACAGCTGCAAAAGCCAAAGAAACTCCGAAAACACCACCAAAGGCCAGAAAGAAGGATGACAAAGAGATGCCAGCTGTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000219211.2 ENSMUST00000219665.2 ENSMUST00000219931.2 ENSMUST00000219982.2 |
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| CDS CCA 90 bp | CTCATGCACAGCTGGCATCTCTTTGTCATCCTTCTTTCTGGCCTTTaGTGGTGTTTTCGGAGTTTCTTTGGCTTTTGCAGCTGTTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LMHSWHLFVILLSGL*WCFRSFFGFCSCWF Trigger: AAACCAACAGCTGCAAAAGCCAAAGAAACTCCGAAAACACCACCAAAGGCCAGAAAGAAGGATGACAAAGAGATGCCAGCTGTGCATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000219211.2 ENSMUST00000219665.2 ENSMUST00000219931.2 ENSMUST00000219982.2 |
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| CDS-3UTR CAA 90 bp | TACCCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTACCCCTATCACCGTTGTGGTaGTCGATGCATTTCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: YPMVVLPFRLVGLDLFLPLSPLW*SMHFLQ Trigger: CTGAAGGAAATGCATCGACAACCACAACGGTGATAG...GGGTAAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
||
| CDS-3UTR CAA 90 bp | AATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTACCCCATCTACAGCTGGCATCTCTTaGTCATCCTTCTTTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NGSTSFQACWLGSLFTPSTAGIS*SSFFLA Trigger: GGCCAGAAAGAAGGATGACAAAGAGATGCCAGCTGT...AGATGGGGTAAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
||
| CDS-3UTR CAA 90 bp | CCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTACCCCATGTTTTCGGAGTTTCTTaGGCTTTTGCAGCTGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PMVVLPFRLVGLDLFLPHVFGVS*AFAAVG Trigger: ACCAACAGCTGCAAAAGCCAAAGAAACTCCGAAAAC...ATGGGGTAAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGAGGGTTCTCTCCAGGTaGTTGGACAGGAGTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVRVLSR*LDRSDR Trigger: CCTGTCACTCCTGTCCAACAACCTGGAGAGAACCCT...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS TCA 90 bp | TGTCTTCATCTGCATCCTCATCATCTTCGTCACCTTCAGATGAGATaGTGTCAGATAGCAAAGAGAAGAAGCCATAGATCCAGTCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLHLHPHHLRHLQMR*CQIAKRRSHRSSLL Trigger: CAACAGACTGGATCTATGGCTTCTTCTCTTTGCTATCTGACATCATCTCATCTGAAGGTGACGAAGATGATGAGGATGCAGATGAAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000219665.2 ENSMUST00000219931.2 ENSMUST00000219982.2 |
||
| CDS TCA 90 bp | TCCCCATGGACAAACATGTCAATCATATATCGACAGAATGCATACTaGTCTTTCTGCTCATGCACAGCTGGCATCTCTTTGTCATCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPWTNMSIIYRQNAY*SFCSCTAGISLSSF Trigger: GAAGGATGACAAAGAGATGCCAGCTGTGCATGAGCAGAAAGATCAGTATGCATTCTGTCGATATATGATTGACATGTTTGTCCATGGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000219211.2 |
||
| CDS CCA 90 bp | CATATATCGACAGAATGCATACTGATCTTTCTGCTCATGCACAGCTaGCATCTCTTTGTCATCCTTCTTTCTGGCCTTTGGTGGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: HISTECILIFLLMHS*HLFVILLSGLWWCF Trigger: AAAACACCACCAAAGGCCAGAAAGAAGGATGACAAAGAGATGCCAGCTGTGCATGAGCAGAAAGATCAGTATGCATTCTGTCGATATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000219211.2 |
||
| CDS-3UTR CAA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTGGATCTGAGCCAATCTaGGCAATGGAGCTTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVGSEPI*AMELAE Trigger: TTCAGCAAGCTCCATTGCCAAGATTGGCTCAGATCC...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | ATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTACCCCATCTGTTTTCTTGTCCTCTTTaGCCATCATCTTCGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: MVVLPFRLVGLDLFLPHLFSCPL*PSSSSL Trigger: CAGAGACGAAGATGATGGCAAAAGAGGACAAGAAAA...CAGATGGGGTAAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
||
| CDS TCA 90 bp | ACCCATAGCCATTGTACCCATTCAAGTACACACATTGGAAGAAGCTaGTGGGACGTGTTTGCTTCTTTGGTGAAGATACATCATCAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: THSHCTHSSTHIGRS*WDVFASLVKIHHQL Trigger: TAACTGATGATGTATCTTCACCAAAGAAGCAAACACGTCCCATCAGCTTCTTCCAATGTGTGTACTTGAATGGGTACAATGGCTATGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTCTATCACCGTTGTGGTaGTCGATGCATTTCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVLSPLW*SMHFLQ Trigger: CTGAAGGAAATGCATCGACAACCACAACGGTGATAG...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGACAGCTGGCATCTCTTaGTCATCCTTCTTTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVTAGIS*SSFFLA Trigger: GGCCAGAAAGAAGGATGACAAAGAGATGCCAGCTGT...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGCTTCAAGGGCCGTTGTaGACAAAGCAGGTTTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVLQGPL*TKQVWK Trigger: CTTCCAAACCTGCTTTGTCAACAACGGCCCTTGAAG...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTTTGGCGGTCATTTGTTaGGTTTCAGGAGGTTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVLAVIC*VSGGLP Trigger: AGGCAAACCTCCTGAAACCAAACAAATGACCGCCAA...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGCTTTCTAGCTGCAGCTaGTGTTGTGAGTTTGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVLSSCS*CCEFGG Trigger: ACCGCCAAACTCACAACACAAGCTGCAGCTAGAAAG...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGGTTCTCTCCAGGTTGTaGGACAGGAGTGACAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVVLSRL*DRSDRK Trigger: TTTCCTGTCACTCCTGTCCAACAACCTGGAGAGAAC...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTCTGTCCTGGAGAGTTaGTTTTGCCAGGGTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVSVLES*FCQGSL Trigger: GAGAGAACCCTGGCAAAACAAACTCTCCAGGACAGA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS GCA 90 bp | AATGGAAATATTTATGTGGGAGAAAACACCACAAAACTAAGTACTTaGCTTCAAGGGCCGTTGTTGACAAAGCAGGTTTGGAAGGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NGNIYVGENTTKLST*LQGPLLTKQVWKVS Trigger: TGACACCTTCCAAACCTGCTTTGTCAACAACGGCCCTTGAAGGCAAGTACTTAGTTTTGTGGTGTTTTCTCCCACATAAATATTTCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219931.2 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGGGTTTGCCTGGTTCTTaGCCTTTCCCATCAATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVGLPGS*PFPSMV Trigger: TACCATTGATGGGAAAGGCAAAGAACCAGGCAAACC...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTTGGTTTCAGGAGGTTaGCCTGGTTCTTTGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVLVSGG*PGSLPF Trigger: GAAAGGCAAAGAACCAGGCAAACCTCCTGAAACCAA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGGCAGCAATCTCTTCCTaGGCTTGTTCAGCTTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVAAISS*ACSAFA Trigger: AGCAAAAGCTGAACAAGCCAAGGAAGAGATTGCTGC...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTGGGTGGCCTTTTTCTaGGTGTTCAGCTTTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVWVAFF*VFSFFW Trigger: CCAGAAAAAGCTGAACACCAAGAAAAAGGCCACCCA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGGTTTTCGGAGTTTCTTaGGCTTTTGCAGCTGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVVFGVS*AFAAVG Trigger: ACCAACAGCTGCAAAAGCCAAAGAAACTCCGAAAAC...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | AGTATGTTAATACCCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTATACATCCATTTTTGTaGTCTATCACCGTTGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SMLIPNGSTSFQACWLGSIHPFL*SITVVV Trigger: AACCACAACGGTGATAGACAACAAAAATGGATGTAT...AGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGGGTATTAACATACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
||
| CDS-3UTR CAA 90 bp | TTAATACCCAATGGTAGTACTTCCTTTCAGGCTTGTTGGCTTGGATCTCTTTTTGTTTCTCTTTGTGAGTaGCTGTCTTCTCAGGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LIPNGSTSFQACWLGSLFVSLCE*LSSQVF Trigger: AAAAACCTGAGAAGACAGCAACTCACAAAGAGAAAC...AAAAAGAGATCCAAGCCAACAAGCCTGAAAGGAAGTACTACCATTGGGTATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTTTTCTTGTCCTCTTTaGCCATCATCTTCGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVFSCPL*PSSSSL Trigger: CAGAGACGAAGATGATGGCAAAAGAGGACAAGAAAA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTCTTGCTCGACTGTCTaGGCTTTCTCTTCTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVSCSTV*AFSSFF Trigger: AAAGAAAGAAGAGAAAGCCAAGACAGTCGAGCAAGA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGTTGCGTGTTTGGCCTTaGTCAGATGATGCTAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVLRVWP*SDDASF Trigger: AAAACTAGCATCATCTGACAAAGGCCAAACACGCAA...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGGACGTGTTTGCTTCTTaGGTGAAGATACATCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVDVFAS*VKIHHQ Trigger: CTGATGATGTATCTTCACCAAAGAAGCAAACACGTC...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTATACATCCATTTTTGTaGTCTATCACCGTTGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVIHPFL*SITVVV Trigger: AACCACAACGGTGATAGACAACAAAAATGGATGTAT...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGGGAATACATCCATTTTaGTTGTCTATCACCGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVGIHPF*LSITVV Trigger: CACAACGGTGATAGACAACAAAAATGGATGTATTCC...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGGTTTCTCTTTGTGAGTaGCTGTCTTCTCAGGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVVSLCE*LSSQVF Trigger: AAAAACCTGAGAAGACAGCAACTCACAAAGAGAAAC...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGCAGATGATGCTAGTTTaGCTTCCTTTTTCACTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVQMMLV*LPFSLV Trigger: CACAAGTGAAAAAGGAAGCAAAACTAGCATCATCTG...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTGAAGCTGGTGCTTCTTaGGAATCTTTTGGTATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVEAGAS*ESFGIF Trigger: AAAAATACCAAAAGATTCCAAAGAAGCACCAGCTTC...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | ATTGATAAAATGGACTTTTGTCTTAGACCTCAAGAACTATGTTTGGCTGCAGTGCTTCTTTATCTTTCTTaGAAGCTGGTGCTTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: IDKMDFCLRPQELCLAAVLLYLS*KLVLLW Trigger: CCAAAGAAGCACCAGCTTCAAAGAAAGATAAAGAAG...CACTGCAGCCAAACATAGTTCTTGAGGTCTAAGACAAAAGTCCATTTTATCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTGAAGTTGGTGCTTCTTaGGAATCTTCTTTATCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVEVGAS*ESSLSF Trigger: GAAAGATAAAGAAGATTCCAAAGAAGCACCAACTTC...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS-3UTR CAA 90 bp | GTTCATTGTAGTGTTGACATTTTTGGTGTGAATTCAGTCTGTCAGCATCTGGTTCTTCTTTATCTTTCTTaGAATGTGGGACATCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VHCSVDIFGVNSVCQHLVLLYLS*NVGHLW Trigger: CCAAAGATGTCCCACATTCAAAGAAAGATAAAGAAG...AACCAGATGCTGACAGACTGAATTCACACCAAAAATGTCAACACTACAATGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS GCA 72 bp | CCATGTGATAATCAGAGCGATGACAAGAAGCCAGGCTaGAGGGGAGCTGAATGTTGTCACAATGTCTTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PCDNQSDDKKPG*RGAECCHNVFG Trigger: ACCGAAGACATTGTGACAACATTCAGCTCCCCTGCAGCCTGGCTTCTTGTCATCGCTCTGATTATCACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000219665.2 ENSMUST00000219931.2 ENSMUST00000219982.2 |
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| CDS GCA 72 bp | GGTGGTGGCATAACTGGGCTTTGTCCTTTCTGCTCATaGACAGCTGGCATCTCTTTGTCATCCTTCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GGGITGLCPFCS*TAGISLSSFFL Trigger: CAGAAAGAAGGATGACAAAGAGATGCCAGCTGTGCATGAGCAGAAAGGACAAAGCCCAGTTATGCCACCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219665.2 ENSMUST00000219931.2 |
||
| CDS CAA 72 bp | TACTTGCCTTCAAGGGCCGTTGTTGACAAAGCAGGTTaGGAAGGTGTCAATGATGGTGGTGGCATAACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: YLPSRAVVDKAG*EGVNDGGGITG Trigger: CCCAGTTATGCCACCACCATCATTGACACCTTCCAAACCTGCTTTGTCAACAACGGCCCTTGAAGGCAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219931.2 |
||
| CDS GCA 72 bp | AATGATGGTGGTGGCATAACTGGGCTTTGTCCTTTCTaGTCATGCACAGCTGGCATCTCTTTGTCATCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NDGGGITGLCPF*SCTAGISLSSF Trigger: GAAGGATGACAAAGAGATGCCAGCTGTGCATGAGCAGAAAGGACAAAGCCCAGTTATGCCACCACCATCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219665.2 ENSMUST00000219931.2 |
||
| CDS CCA 72 bp | CATAACTGGGCTTTGTCCTTTCTGCTCATGCACAGCTaGCATCTCTTTGTCATCCTTCTTTCTGGCCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HNWALSFLLMHS*HLFVILLSGLW Trigger: CCAAAGGCCAGAAAGAAGGATGACAAAGAGATGCCAGCTGTGCATGAGCAGAAAGGACAAAGCCCAGTTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219665.2 ENSMUST00000219931.2 |
||
| CDS CAA 72 bp | GCTGCAGCTTGTGTTGTGAGTTTGGCGGTCATTTGTTaGGTTTCAGGAGGTTTGCCTGGTTCTTTGCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AAACVVSLAVIC*VSGGLPGSLPF Trigger: GAAAGGCAAAGAACCAGGCAAACCTCCTGAAACCAAACAAATGACCGCCAAACTCACAACACAAGCTGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095762.5 ENSMUST00000219211.2 |
||
| CDS CAA 72 bp | TCTAGCTGCAGCTTGTGTTGTGAGTTTGGCGGTCATTaGTTTGGTTTCAGGAGGTTTGCCTGGTTCTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSCSLCCEFGGH*FGFRRFAWFFA Trigger: GGCAAAGAACCAGGCAAACCTCCTGAAACCAAACAAATGACCGCCAAACTCACAACACAAGCTGCAGCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095762.5 ENSMUST00000219211.2 |
||
| CDS CAA 90 bp | GCTCATGCACAGCTGGCATCTCTTTGTCATCCTTCTTTCTGGCCTTaGGTGGTGTTTTCGGAGTTTCTTTGGCTTTTGCAGCTGTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AHAQLASLCHPSFWP*VVFSEFLWLLQLLV Trigger: AACCAACAGCTGCAAAAGCCAAAGAAACTCCGAAAACACCACCAAAGGCCAGAAAGAAGGATGACAAAGAGATGCCAGCTGTGCATGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000219211.2 ENSMUST00000219665.2 ENSMUST00000219931.2 ENSMUST00000219982.2 |
||
| CDS CAA 90 bp | CTCATCCTTTCTAGCTGCAGCTTGTGTTGTGAGTTTGGCGGTCATTaGTTTGGTTTCAGGAGGTTTGCCTGGTTCTTTGCCTTTCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: LILSSCSLCCEFGGH*FGFRRFAWFFAFPI Trigger: GATGGGAAAGGCAAAGAACCAGGCAAACCTCCTGAAACCAAACAAATGACCGCCAAACTCACAACACAAGCTGCAGCTAGAAAGGATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095762.5 ENSMUST00000219211.2 |
||
| CDS CAA 90 bp | TTGCTTCTGTCCTGGAGAGTTTGTTTTGCCAGGGTTCTCTCCAGGTaGTTGGACAGGAGTGACAGGAAACTGAAACCCATAGCCATTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LLLSWRVCFARVLSR*LDRSDRKLKPIAIV Trigger: TACAATGGCTATGGGTTTCAGTTTCCTGTCACTCCTGTCCAACAACCTGGAGAGAACCCTGGCAAAACAAACTCTCCAGGACAGAAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS CAA 90 bp | GTGGGAGAAAACACCACAAAACTAAGTACTTGCCTTCAAGGGCCGTaGTTGACAAAGCAGGTTTGGAAGGTGTCAATGATGGTGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VGENTTKLSTCLQGP*LTKQVWKVSMMVVA Trigger: TGCCACCACCATCATTGACACCTTCCAAACCTGCTTTGTCAACAACGGCCCTTGAAGGCAAGTACTTAGTTTTGTGGTGTTTTCTCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219931.2 |
||
| CDS CAA 90 bp | TCCTTTCTAGCTGCAGCTTGTGTTGTGAGTTTGGCGGTCATTTGTTaGGTTTCAGGAGGTTTGCCTGGTTCTTTGCCTTTCCCATCAATG | + |
|
Preference number: 6 (lower is better) Translates to: SFLAAACVVSLAVIC*VSGGLPGSLPFPSM Trigger: CATTGATGGGAAAGGCAAAGAACCAGGCAAACCTCCTGAAACCAAACAAATGACCGCCAAACTCACAACACAAGCTGCAGCTAGAAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095762.5 ENSMUST00000219211.2 |
||
| CDS CAA 90 bp | CGACTGTCTTGGCTTTCTCTTCTTTCTTTCCATGCAGGGCCTTTTTaGTTGAGGCAGCAGCAATCTCTTCCTTGGCTTGTTCAGCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RLSWLSLLSFHAGPF*LRQQQSLPWLVQLL Trigger: CAAAAGCTGAACAAGCCAAGGAAGAGATTGCTGCTGCCTCAACAAAAAAGGCCCTGCATGGAAAGAAAGAAGAGAAAGCCAAGACAGTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
||
| CDS CAA 90 bp | CTCCTGGAATGTTTACCTTTCTGCTCATGCACAGCTGGCATCTCTTaGTCATCCTTCTTTCTGGCCTTTGGTGGTGTTTTCGGAGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLECLPFCSCTAGIS*SSFFLAFGGVFGVS Trigger: AGAAACTCCGAAAACACCACCAAAGGCCAGAAAGAAGGATGACAAAGAGATGCCAGCTGTGCATGAGCAGAAAGGTAAACATTCCAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219982.2 |
||
| CDS CAA 90 bp | ATAACTGGGCTTTGTCCTTTCTGCTCATGCACAGCTGGCATCTCTTaGTCATCCTTCTTTCTGGCCTTTGGTGGTGTTTTCGGAGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ITGLCPFCSCTAGIS*SSFFLAFGGVFGVS Trigger: AGAAACTCCGAAAACACCACCAAAGGCCAGAAAGAAGGATGACAAAGAGATGCCAGCTGTGCATGAGCAGAAAGGACAAAGCCCAGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219665.2 ENSMUST00000219931.2 |
||
| CDS CCA 72 bp | AGCTGGCATCTCTTTGTCATCCTTCTTTCTGGCCTTTaGTGGTGTTTTCGGAGTTTCTTTGGCTTTTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SWHLFVILLSGL*WCFRSFFGFCS Trigger: GCTGCAAAAGCCAAAGAAACTCCGAAAACACCACCAAAGGCCAGAAAGAAGGATGACAAAGAGATGCCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000219211.2 ENSMUST00000219665.2 ENSMUST00000219931.2 ENSMUST00000219982.2 |
||
| CDS CCA 72 bp | CATGCACAGCTGGCATCTCTTTGTCATCCTTCTTTCTaGCCTTTGGTGGTGTTTTCGGAGTTTCTTTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: HAQLASLCHPSF*PLVVFSEFLWL Trigger: AAGCCAAAGAAACTCCGAAAACACCACCAAAGGCCAGAAAGAAGGATGACAAAGAGATGCCAGCTGTGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000219211.2 ENSMUST00000219665.2 ENSMUST00000219931.2 ENSMUST00000219982.2 |
||
| CDS CAA 72 bp | CAGCTGGCATCTCTTTGTCATCCTTCTTTCTGGCCTTaGGTGGTGTTTTCGGAGTTTCTTTGGCTTTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QLASLCHPSFWP*VVFSEFLWLLQ Trigger: CTGCAAAAGCCAAAGAAACTCCGAAAACACCACCAAAGGCCAGAAAGAAGGATGACAAAGAGATGCCAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000219211.2 ENSMUST00000219665.2 ENSMUST00000219931.2 ENSMUST00000219982.2 |
||
| CDS CAA 72 bp | TCTTTTTCTTCAAGGGCCGTTGTTGACAAAGCAGGTTaGGAAGGTGTCAATGATGGTGGTGGCATAACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SFSSRAVVDKAG*EGVNDGGGITG Trigger: CCCAGTTATGCCACCACCATCATTGACACCTTCCAAACCTGCTTTGTCAACAACGGCCCTTGAAGAAAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095762.5 ENSMUST00000219211.2 |
||
| CDS CAA 72 bp | CTTTGTCCTTTCTGCTCATGCACAGCTGGCATCTCTTaGTCATCCTTCTTTCTGGCCTTTGGTGGTGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LCPFCSCTAGIS*SSFFLAFGGVF Trigger: GAAAACACCACCAAAGGCCAGAAAGAAGGATGACAAAGAGATGCCAGCTGTGCATGAGCAGAAAGGACAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219665.2 ENSMUST00000219931.2 |
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| CDS CCA 72 bp | TGGCATCTCTTTGTCATCCTTCTTTCTGGCCTTTGGTaGTGTTTTCGGAGTTTCTTTGGCTTTTGCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: WHLFVILLSGLW*CFRSFFGFCSC Trigger: ACAGCTGCAAAAGCCAAAGAAACTCCGAAAACACCACCAAAGGCCAGAAAGAAGGATGACAAAGAGATGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000219211.2 ENSMUST00000219665.2 ENSMUST00000219931.2 ENSMUST00000219982.2 |
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| CDS CCA 72 bp | ACAGAATGCATACTGATCTTTCTGCTCATGCACAGCTaGCATCTCTTTGTCATCCTTCTTTCTGGCCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: TECILIFLLMHS*HLFVILLSGLW Trigger: CCAAAGGCCAGAAAGAAGGATGACAAAGAGATGCCAGCTGTGCATGAGCAGAAAGATCAGTATGCATTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000219211.2 |
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| CDS CAA 72 bp | GTGAGTTTGGCGGTCATTTGTTTGGTTTCAGGAGGTTaGCCTGGTTCTTTGCCTTTCCCATCAATGGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: VSLAVICLVSGG*PGSLPFPSMVV Trigger: AACTACCATTGATGGGAAAGGCAAAGAACCAGGCAAACCTCCTGAAACCAAACAAATGACCGCCAAACTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095762.5 ENSMUST00000219211.2 |
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| CDS CAA 72 bp | TTCTCATCCTTTCTAGCTGCAGCTTGTGTTGTGAGTTaGGCGGTCATTTGTTTGGTTTCAGGAGGTTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: FSSFLAAACVVS*AVICLVSGGLP Trigger: AGGCAAACCTCCTGAAACCAAACAAATGACCGCCAAACTCACAACACAAGCTGCAGCTAGAAAGGATGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095762.5 ENSMUST00000219211.2 |
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| CDS CAA 72 bp | TGGCTTTCTCTTCTTTCTTTCCATGCAGGGCCTTTTTaGTTGAGGCAGCAGCAATCTCTTCCTTGGCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: WLSLLSFHAGPF*LRQQQSLPWLV Trigger: AACAAGCCAAGGAAGAGATTGCTGCTGCCTCAACAAAAAAGGCCCTGCATGGAAAGAAAGAAGAGAAAGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS CAA 72 bp | ACCACAAAACTAAGTACTTGCCTTCAAGGGCCGTTGTaGACAAAGCAGGTTTGGAAGGTGTCAATGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: TTKLSTCLQGPL*TKQVWKVSMMV Trigger: CACCATCATTGACACCTTCCAAACCTGCTTTGTCAACAACGGCCCTTGAAGGCAAGTACTTAGTTTTGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219931.2 |
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| CDS CAA 72 bp | GCATCATTCACTAGTTTTAGAGGATCTGAGCCAATCTaGGCAATGGAGCTTGCTTCAGCAGTGATCTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: ASFTSFRGSEPI*AMELASAVISV Trigger: GACTGAGATCACTGCTGAAGCAAGCTCCATTGCCAAGATTGGCTCAGATCCTCTAAAACTAGTGAATGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218281.2 |
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| CDS CAA 90 bp | GACCTCTTCAGCACCTTTCCAGGGGATTTAGGAATACATCCATTTTaGTTGTCTATCACCGTTGTGGTTGTCGATGCATTTCCTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: DLFSTFPGDLGIHPF*LSITVVVVDAFPSA Trigger: TGCTGAAGGAAATGCATCGACAACCACAACGGTGATAGACAACAAAAATGGATGTATTCCTAAATCCCCTGGAAAGGTGCTGAAGAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000219665.2 ENSMUST00000219931.2 ENSMUST00000219982.2 |
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| CDS CAA 90 bp | GCTTGTGTTGTGAGTTTGGCGGTCATTTGTTTGGTTTCAGGAGGTTaGCCTGGTTCTTTGCCTTTCCCATCAATGGTAGTTTCTTCACTT | + |
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Preference number: 6 (lower is better) Translates to: ACVVSLAVICLVSGG*PGSLPFPSMVVSSL Trigger: AAGTGAAGAAACTACCATTGATGGGAAAGGCAAAGAACCAGGCAAACCTCCTGAAACCAAACAAATGACCGCCAAACTCACAACACAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095762.5 ENSMUST00000219211.2 |
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| CDS CAA 90 bp | TCTTCTTTCTTCTCATCCTTTCTAGCTGCAGCTTGTGTTGTGAGTTaGGCGGTCATTTGTTTGGTTTCAGGAGGTTTGCCTGGTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SSFFSSFLAAACVVS*AVICLVSGGLPGSL Trigger: CAAAGAACCAGGCAAACCTCCTGAAACCAAACAAATGACCGCCAAACTCACAACACAAGCTGCAGCTAGAAAGGATGAGAAGAAAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095762.5 ENSMUST00000219211.2 |
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| CDS TCA 72 bp | CTGCATCCTCATCATCTTCGTCACCTTCAGATGAGATaGTGTCAGATAGCAAAGAGAAGAAGCCATAGATCC | + |
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Preference number: 6 (lower is better) Translates to: LHPHHLRHLQMR*CQIAKRRSHRS Trigger: GGATCTATGGCTTCTTCTCTTTGCTATCTGACATCATCTCATCTGAAGGTGACGAAGATGATGAGGATGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000218281.2 ENSMUST00000219665.2 ENSMUST00000219931.2 ENSMUST00000219982.2 |
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| CDS CCA 72 bp | ACTTGCTCTGGTCTGGTGATGTTCTGTTTGCGTGTTTaGCCTTTGTCAGATGATGCTAGTTTTGCTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: TCSGLVMFCLRV*PLSDDASFASF Trigger: AAAGGAAGCAAAACTAGCATCATCTGACAAAGGCCAAACACGCAAACAGAACATCACCAGACCAGAGCAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS GCA 72 bp | CCCATGGACAAACATGTCAATCATATATCGACAGAATaGATACTGATCTTTCTGCTCATGCACAGCTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: PMDKHVNHISTE*ILIFLLMHSWH Trigger: ATGCCAGCTGTGCATGAGCAGAAAGATCAGTATGCATTCTGTCGATATATGATTGACATGTTTGTCCATGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000219211.2 |
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| CDS GCA 72 bp | ATTTATGTGGGAGAAAACACCACAAAACTAAGTACTTaGCTTCAAGGGCCGTTGTTGACAAAGCAGGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: IYVGENTTKLST*LQGPLLTKQVW Trigger: CCAAACCTGCTTTGTCAACAACGGCCCTTGAAGGCAAGTACTTAGTTTTGTGGTGTTTTCTCCCACATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219931.2 |
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| CDS CAA 72 bp | TCTGGTCTGGTGATGTTCTGTTTGCGTGTTTGGCCTTaGTCAGATGATGCTAGTTTTGCTTCCTTTTTCACT | + |
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Preference number: 6 (lower is better) Translates to: SGLVMFCLRVWP*SDDASFASFFT Trigger: AGTGAAAAAGGAAGCAAAACTAGCATCATCTGACAAAGGCCAAACACGCAAACAGAACATCACCAGACCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS TCA 72 bp | CATTGTACCCATTCAAGTACACACATTGGAAGAAGCTaGTGGGACGTGTTTGCTTCTTTGGTGAAGATACAT | + |
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Preference number: 6 (lower is better) Translates to: HCTHSSTHIGRS*WDVFASLVKIH Trigger: ATGTATCTTCACCAAAGAAGCAAACACGTCCCATCAGCTTCTTCCAATGTGTGTACTTGAATGGGTACAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS CCA 72 bp | GGCATAACTGGGCTTTGTCCTGGTTTTAAATCCCCATaGACAAACATGTCAATCATATATCGACAGAATGCA | + |
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Preference number: 6 (lower is better) Translates to: GITGLCPGFKSP*TNMSIIYRQNA Trigger: TGCATTCTGTCGATATATGATTGACATGTTTGTCCATGGGGATTTAAAACCAGGACAAAGCCCAGTTATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095762.5 ENSMUST00000219211.2 |
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| CDS CAA 72 bp | AGCACCTTTCCAGGGGATTTAGGAATACATCCATTTTaGTTGTCTATCACCGTTGTGGTTGTCGATGCATTT | + |
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Preference number: 6 (lower is better) Translates to: STFPGDLGIHPF*LSITVVVVDAF Trigger: AAATGCATCGACAACCACAACGGTGATAGACAACAAAAATGGATGTATTCCTAAATCCCCTGGAAAGGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000219665.2 ENSMUST00000219931.2 ENSMUST00000219982.2 |
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| CDS CAA 72 bp | GTCATTTGTTTGGTTTCAGGAGGTTTGCCTGGTTCTTaGCCTTTCCCATCAATGGTAGTTTCTTCACTTTTC | + |
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Preference number: 6 (lower is better) Translates to: VICLVSGGLPGS*PFPSMVVSSLF Trigger: GAAAAGTGAAGAAACTACCATTGATGGGAAAGGCAAAGAACCAGGCAAACCTCCTGAAACCAAACAAATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095762.5 ENSMUST00000219211.2 |
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| CDS CAA 72 bp | GTGTTCAGCTTTTTCTGGTTTAACATGAGGAATAACTaGCTCTGGTCTGGTGATGTTCTGTTTGCGTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: VFSFFWFNMRNN*LWSGDVLFACL Trigger: CAAACACGCAAACAGAACATCACCAGACCAGAGCAAGTTATTCCTCATGTTAAACCAGAAAAAGCTGAACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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| CDS CAA 72 bp | TATTTATGTGGGAGAAAACACCACAAAACTAAGTACTaGCCTTCAAGGGCCGTTGTTGACAAAGCAGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: YLCGRKHHKTKY*PSRAVVDKAGL Trigger: CAAACCTGCTTTGTCAACAACGGCCCTTGAAGGCAAGTACTTAGTTTTGTGGTGTTTTCTCCCACATAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219931.2 |
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| CDS TCA 72 bp | ACAAACATGTCAATCATATATCGACAGAATGCATACTaGTCTTTCTGCTCATGCACAGCTGGCATCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: TNMSIIYRQNAY*SFCSCTAGISL Trigger: CAAAGAGATGCCAGCTGTGCATGAGCAGAAAGATCAGTATGCATTCTGTCGATATATGATTGACATGTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095762.5 ENSMUST00000217779.2 ENSMUST00000219211.2 |
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| CDS GCA 72 bp | AAGTACACACATTGGAAGAAGCTGATGGGACGTGTTTaGTTCTTTGGTGAAGATACATCATCAGTTACTTCT | + |
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Preference number: 6 (lower is better) Translates to: KYTHWKKLMGRV*FFGEDTSSVTS Trigger: AGAAGTAACTGATGATGTATCTTCACCAAAGAAGCAAACACGTCCCATCAGCTTCTTCCAATGTGTGTACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095762.5 |
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