Pregenerated sensors for TRDMT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026723Ensembl transcript IDs: ENSMUST00000124488.7, ENSMUST00000144957.3
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATAGATGTCTCTTAGCGCTGAGTCCTTCACAGTCTCTTGCTCTCTaGGTTTCTGTGTTGCTGTCTACTGCAAGAGGCTTGCTTACCTGT | + |
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Preference number: 1 (lower is better) Translates to: DRCLLALSPSQSLAL*VSVLLSTARGLLTC Trigger: ACAGGTAAGCAAGCCTCTTGCAGTAGACAGCAACACAGAAACCCAGAGAGCAAGAGACTGTGAAGGACTCAGCGCTAAGAGACATCTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR CAA 90 bp | CATGTCCAACCAGCAGTGCCTCTCGCCTTCAGAATTTTCTCATGCTaGCAAACAGAAGCTCTGTACCTGCTAAACACTGACCTCCTAGTC | + |
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Preference number: 2 (lower is better) Translates to: HVQPAVPLAFRIFSC*QTEALYLLNTDLLV Trigger: GACTAGGAGGTCAGTGTTTAGCAGGTACAGAGCTTCTGTTTGCAAGCATGAGAAAATTCTGAAGGCGAGAGGCACTGCTGGTTGGACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR-3UTR TCA 90 bp | CTTTATCTCCAGATTAAGGTTAGAGAGGAAGCCAGGTTAAGTATCTCTAGCTTTTTCTGCAATGATCGCTaGGCCTCGGGAGGGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LYLQIKVREEARLSISSFFCNDR*ASGGRG Trigger: TCCCCTCCCTCCCGAGGCTCAGCGATCATTGCAGAA...AAAGCTAGAGATACTTAACCTGGCTTCCTCTCTAACCTTAATCTGGAGATAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR-3UTR GCA 90 bp | AATCACATCTTAGGTTCCTCTCCCAGCAGCTACCAAATGCCAATAGCCTCTGAGTGTGTTGCTGTCTACTaGAAGAGGCTTGCTTACCTG | + |
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Preference number: 2 (lower is better) Translates to: NHILGSSPSSYQMPIASECVAVY*KRLAYL Trigger: CAGGTAAGCAAGCCTCTTGCAGTAGACAGCAACACA...CTCAGAGGCTATTGGCATTTGGTAGCTGCTGGGAGAGGAACCTAAGATGTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR-3UTR TCA 90 bp | ATAAAGGACGGAGTAGCATCATATAGAAATAGCAGCAATAGCAGCACGTTTTCCAATGCCAATAGCCTCTaGGCTAGGGGTGTGCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: IKDGVASYRNSSNSSTFSNANSL*ARGVPW Trigger: CCAAGGCACACCCCTAGCTCAGAGGCTATTGGCATT...GGAAAACGTGCTGCTATTGCTGCTATTTCTATATGATGCTACTCCGTCCTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR CAA 90 bp | GTAAGTAATATAAAATTAGCCATCCAACAGACATTAAGTGTACAGTaGGGTGGCACTCAGCACACCACCATGTCCAACCAGCAGTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: VSNIKLAIQQTLSVQ*GGTQHTTMSNQQCL Trigger: GAGGCACTGCTGGTTGGACATGGTGGTGTGCTGAGTGCCACCCAACTGTACACTTAATGTCTGTTGGATGGCTAATTTTATATTACTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR-3UTR GCA 90 bp | ATTTTCTCATGCTTGCAAACAGAAGCTCTGTACCTGCTAAACACTGACCTCCTAAACCCCTGCAAACACTaGCCTCCTTACTGTCTCTAT | + |
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Preference number: 2 (lower is better) Translates to: IFSCLQTEALYLLNTDLLNPCKH*PPYCLY Trigger: ATAGAGACAGTAAGGAGGGCAGTGTTTGCAGGGGTT...TAGGAGGTCAGTGTTTAGCAGGTACAGAGCTTCTGTTTGCAAGCATGAGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR-3UTR GCA 90 bp | ATTTTCTCATGCTTGCAAACAGAAGCTCTGTACCTGCTAAACACTGACCTCCTACTGAAAGGAAGGATGTaGAAATGGAGGCAGGACAAT | + |
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Preference number: 2 (lower is better) Translates to: IFSCLQTEALYLLNTDLLLKGRM*KWRQDN Trigger: ATTGTCCTGCCTCCATTTGCACATCCTTCCTTTCAG...TAGGAGGTCAGTGTTTAGCAGGTACAGAGCTTCTGTTTGCAAGCATGAGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR-3UTR CCA 90 bp | ATAAAGGACGGAGTAGCATCATATAGAAATAGCAGCAATAGCAGCACGTTTTCCTGCTGGGATGCGCTCTaGGGTTCAGATCTTTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: IKDGVASYRNSSNSSTFSCWDAL*GSDLLN Trigger: ATTCAAAAGATCTGAACCCCAGAGCGCATCCCAGCA...GGAAAACGTGCTGCTATTGCTGCTATTTCTATATGATGCTACTCCGTCCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR CAA 90 bp | TTTGGATCATATTCATACTCCCTCCCCTATCCACCCAAATTCAATTaGTGTTCCTCAAATACTCTTGAGTATAAGCCTACCCTGGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: FGSYSYSLPYPPKFN*CSSNTLEYKPTLGC Trigger: ACACCCCAGGGTAGGCTTATACTCAAGAGTATTTGAGGAACACAAATTGAATTTGGGTGGATAGGGGAGGGAGTATGAATATGATCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR-3UTR GCA 90 bp | CTTTATCTCCAGATTAAGGTTAGAGAGGAAGCCAGGTTAAGTATCTCTAGCTTTTCCTTCACAGTCTCTTaGTCTCTGGGTTTCTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: LYLQIKVREEARLSISSFSFTVS*SLGFCV Trigger: AACACAGAAACCCAGAGAGCAAGAGACTGTGAAGGA...AAAGCTAGAGATACTTAACCTGGCTTCCTCTCTAACCTTAATCTGGAGATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR GCA 72 bp | TGCCTTGGTACCCACTCTACCTGCTCCATGCTGGGATaGGCTCTGGGGTTCAGATCTTTTGAATGCTGTCAC | + |
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Preference number: 3 (lower is better) Translates to: CLGTHSTCSMLG*ALGFRSFECCH Trigger: GTGACAGCATTCAAAAGATCTGAACCCCAGAGCGCATCCCAGCATGGAGCAGGTAGAGTGGGTACCAAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR GCA 72 bp | GGTGGCACTCAGCACACCACCATGTCCAACCAGCAGTaGCTCTCGCCTTCAGAATTTTCTCATGCTTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: GGTQHTTMSNQQ*LSPSEFSHACK Trigger: TTTGCAAGCATGAGAAAATTCTGAAGGCGAGAGGCACTGCTGGTTGGACATGGTGGTGTGCTGAGTGCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR CCA 72 bp | GTATCACAGAGCAGGTGGCTATTCCCACGATACTCATaGGCATATCTTCGTAGGAGAGTCACTACTGTGGCG | + |
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Preference number: 3 (lower is better) Translates to: VSQSRWLFPRYS*AYLRRRVTTVA Trigger: CGCCACAGTAGTGACTCTCCTACGAAGATATGCCCATGAGTATCGTGGGAATAGCCACCTGCTCTGTGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR CCA 72 bp | ATTAGCCATCCAACAGACATTAAGTGTACAGTTGGGTaGCACTCAGCACACCACCATGTCCAACCAGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: ISHPTDIKCTVG*HSAHHHVQPAV Trigger: CACTGCTGGTTGGACATGGTGGTGTGCTGAGTGCCACCCAACTGTACACTTAATGTCTGTTGGATGGCTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR GCA 72 bp | GTCCTTCACAGTCTCTTGCTCTCTGGGTTTCTGTGTTaGTGTCTACTGCAAGAGGCTTGCTTACCTGTTGAA | + |
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Preference number: 3 (lower is better) Translates to: VLHSLLLSGFLC*CLLQEACLPVE Trigger: TTCAACAGGTAAGCAAGCCTCTTGCAGTAGACAGCAACACAGAAACCCAGAGAGCAAGAGACTGTGAAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR TCA 72 bp | AGCAGCACGTTTTCCTCCCTTAACCTTACTGCCACATaGCCCATGCCATATGCCTTAGAATGGAACAACAGA | + |
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Preference number: 3 (lower is better) Translates to: SSTFSSLNLTAT*PMPYALEWNNR Trigger: TCTGTTGTTCCATTCTAAGGCATATGGCATGGGTCATGTGGCAGTAAGGTTAAGGGAGGAAAACGTGCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR TCA 72 bp | ACTGAAAGGAAGGATGTGCAAATGGAGGCAGGACAATaGGGCTTTATCTCCAGATTAAGGTTAGAGAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: TERKDVQMEAGQ*GFISRLRLERK Trigger: CTTCCTCTCTAACCTTAATCTGGAGATAAAGCCTCATTGTCCTGCCTCCATTTGCACATCCTTCCTTTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR TCA 72 bp | AGTGACATAAATGTGAGGGACAATTGGATGATACAGTaGCATAAATGTGAGGGACAATTGGATGATACAGTG | + |
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Preference number: 3 (lower is better) Translates to: SDINVRDNWMIQ*HKCEGQLDDTV Trigger: CACTGTATCATCCAATTGTCCCTCACATTTATGTCACTGTATCATCCAATTGTCCCTCACATTTATGTCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR-3UTR CAA 90 bp | CTTTATCTCCAGATTAAGGTTAGAGAGGAAGCCAGGTTAAGTATCTCTAGCTTTCCACCCAAATTCAATTaGTGTTCCTCAAATACTCTT | + |
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Preference number: 3 (lower is better) Translates to: LYLQIKVREEARLSISSFPPKFN*CSSNTL Trigger: AAGAGTATTTGAGGAACACAAATTGAATTTGGGTGG...AAAGCTAGAGATACTTAACCTGGCTTCCTCTCTAACCTTAATCTGGAGATAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR TCA 72 bp | AGTGACATAAATGTGAGGGACAATTGGATGATACAGTaGCATAAATGTGAGGGACAATTGGATGTACACATT | + |
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Preference number: 3 (lower is better) Translates to: SDINVRDNWMIQ*HKCEGQLDVHI Trigger: AATGTGTACATCCAATTGTCCCTCACATTTATGTCACTGTATCATCCAATTGTCCCTCACATTTATGTCACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR CCA 72 bp | GGCAAGTATCATAAACCCATTCCAGGTAACACTGACTaGTATTCTAGTAGATGTTTGCAACACATTTTATTT | + |
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Preference number: 3 (lower is better) Translates to: GKYHKPIPGNTD*YSSRCLQHILF Trigger: AAATAAAATGTGTTGCAAACATCTACTAGAATACCAGTCAGTGTTACCTGGAATGGGTTTATGATACTTGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR GCA 90 bp | AATCACATCTTAGGTTCCTCTCCCAGCAGCTACCAAATGCCAATAGCCTCTGAGTCTCGCAGCGCGTGGTaGATGCCACCAATGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: NHILGSSPSSYQMPIASESRSAW*MPPMPL Trigger: CAGTGGCATTGGTGGCATGCACCACGCGCTGCGAGA...CTCAGAGGCTATTGGCATTTGGTAGCTGCTGGGAGAGGAACCTAAGATGTGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR CCA 90 bp | CGATACTCATGGGCATATCTTCGTAGGAGAGTCACTACTGTGGCGTCCTGGTTCAGCACATGGACCTTCTaGACGTGGGCTTCACGATAT | + |
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Preference number: 4 (lower is better) Translates to: RYSWAYLRRRVTTVASWFSTWTF*TWASRY Trigger: ATATCGTGAAGCCCACGTCCAGAAGGTCCATGTGCT...GAACCAGGACGCCACAGTAGTGACTCTCCTACGAAGATATGCCCATGAGTATCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR TCA 90 bp | TTAGCCATCCAACAGACATTAAGTGTACAGTTGGGTGGCACTCAGCACACCACCGAAGGGGAAAGGCTCTaGCTGAAGCTTTGCAATGAG | + |
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Preference number: 4 (lower is better) Translates to: LAIQQTLSVQLGGTQHTTEGERL*LKLCNE Trigger: CTCATTGCAAAGCTTCAGTCAGAGCCTTTCCCCTTC...GGTGGTGTGCTGAGTGCCACCCAACTGTACACTTAATGTCTGTTGGATGGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR TCA 90 bp | CGATACTCATGGGCATATCTTCGTAGGAGAGTCACTACTGTGGCGTCCTGGTTCGGGAAAGGCTCTGACTaGAGCTTTGCAATGAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: RYSWAYLRRRVTTVASWFGKGSD*SFAMRK Trigger: TTTTCTCATTGCAAAGCTTCAGTCAGAGCCTTTCCC...GAACCAGGACGCCACAGTAGTGACTCTCCTACGAAGATATGCCCATGAGTATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR GCA 90 bp | CGATACTCATGGGCATATCTTCGTAGGAGAGTCACTACTGTGGCGTCCTGGTTCAAGTCTTTCAGCATCTaGACAGAGAGGTCACTGTCT | + |
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Preference number: 4 (lower is better) Translates to: RYSWAYLRRRVTTVASWFKSFSI*TERSLS Trigger: AGACAGTGACCTCTCTGTGCAGATGCTGAAAGACTT...GAACCAGGACGCCACAGTAGTGACTCTCCTACGAAGATATGCCCATGAGTATCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR CCA 90 bp | AATCACATCTTAGGTTCCTCTCCCAGCAGCTACCAAATGCCAATAGCCTCTGAGGCCAATTCTTGTGAATaGCTGGCATGGAGGGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: NHILGSSPSSYQMPIASEANSCE*LAWRAH Trigger: ATGAGCCCTCCATGCCAGCCATTCACAAGAATTGGC...CTCAGAGGCTATTGGCATTTGGTAGCTGCTGGGAGAGGAACCTAAGATGTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR CCA 90 bp | ATTTTCTCATGCTTGCAAACAGAAGCTCTGTACCTGCTAAACACTGACCTCCTAATCTGTCCAGGGGCCTaGAAGGGGAAAGGCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: IFSCLQTEALYLLNTDLLICPGA*KGKGSD Trigger: GTCAGAGCCTTTCCCCTTCCAGGCCCCTGGACAGAT...TAGGAGGTCAGTGTTTAGCAGGTACAGAGCTTCTGTTTGCAAGCATGAGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR CAA 72 bp | CCTGCAAACACTGCCCTCCTTACTGTCTCTATGAGCTaGACTCACAGGGGAATGAAACCACTCTTGCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: PANTALLTVSMS*THRGMKPLLPF Trigger: AAAAGGCAAGAGTGGTTTCATTCCCCTGTGAGTCAAGCTCATAGAGACAGTAAGGAGGGCAGTGTTTGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR CAA 72 bp | CCAGCAGTGCCTCTCGCCTTCAGAATTTTCTCATGCTaGCAAACAGAAGCTCTGTACCTGCTAAACACTGAC | + |
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Preference number: 4 (lower is better) Translates to: PAVPLAFRIFSC*QTEALYLLNTD Trigger: GTCAGTGTTTAGCAGGTACAGAGCTTCTGTTTGCAAGCATGAGAAAATTCTGAAGGCGAGAGGCACTGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR GCA 90 bp | CAAATACTCTTGAGTATAAGCCTACCCTGGGGTGTGTTCCACATACCAGGAATCAACTCTGTGTGCTGCTaGTCTCAGCACAGATACGTG | + |
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Preference number: 4 (lower is better) Translates to: QILLSISLPWGVFHIPGINSVCC*SQHRYV Trigger: CACGTATCTGTGCTGAGAGCAGCAGCACACAGAGTT...GATTCCTGGTATGTGGAACACACCCCAGGGTAGGCTTATACTCAAGAGTATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR GCA 90 bp | TCTATTGTTTGTATCAGCAGCCCTCTTGTAGAAGATACTTCAAAACCTTTGACATCTCGCAGCGCGTGGTaGATGCCACCAATGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: SIVCISSPLVEDTSKPLTSRSAW*MPPMPL Trigger: CAGTGGCATTGGTGGCATGCACCACGCGCTGCGAGA...TGTCAAAGGTTTTGAAGTATCTTCTACAAGAGGGCTGCTGATACAAACAATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144957.3 |
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| CDS-3UTR TCA 90 bp | CTTTATCTCCAGATTAAGGTTAGAGAGGAAGCCAGGTTAAGTATCTCTAGCTTTCTACCACATGCACGTTaGGGCTATTGCCAAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LYLQIKVREEARLSISSFLPHAR*GYCQAA Trigger: GGCTGCTTGGCAATAGCCTCAACGTGCATGTGGTAG...AAAGCTAGAGATACTTAACCTGGCTTCCTCTCTAACCTTAATCTGGAGATAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR CCA 90 bp | TTAGCCATCCAACAGACATTAAGTGTACAGTTGGGTGGCACTCAGCACACCACCATCGCAGCAATAACTTaGGTGGTAAAAGGTACTCAT | + |
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Preference number: 4 (lower is better) Translates to: LAIQQTLSVQLGGTQHTTIAAIT*VVKGTH Trigger: ATGAGTACCTTTTACCACCCAAGTTATTGCTGCGAT...GGTGGTGTGCTGAGTGCCACCCAACTGTACACTTAATGTCTGTTGGATGGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR CAA 72 bp | ATAAAATTAGCCATCCAACAGACATTAAGTGTACAGTaGGGTGGCACTCAGCACACCACCATGTCCAACCAG | + |
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Preference number: 4 (lower is better) Translates to: IKLAIQQTLSVQ*GGTQHTTMSNQ Trigger: CTGGTTGGACATGGTGGTGTGCTGAGTGCCACCCAACTGTACACTTAATGTCTGTTGGATGGCTAATTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR TCA 90 bp | ATTTTCTCATGCTTGCAAACAGAAGCTCTGTACCTGCTAAACACTGACCTCCTACTCTGCACTCTTGGCTaGCTTTCTTCAACTACTGCA | + |
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Preference number: 4 (lower is better) Translates to: IFSCLQTEALYLLNTDLLLCTLG*LSSTTA Trigger: TGCAGTAGTTGAAGAAAGTCAGCCAAGAGTGCAGAG...TAGGAGGTCAGTGTTTAGCAGGTACAGAGCTTCTGTTTGCAAGCATGAGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR GCA 90 bp | ATTTTCTCATGCTTGCAAACAGAAGCTCTGTACCTGCTAAACACTGACCTCCTAGCCTCGAGTTTGGAATaGCTAGAGAAGAAGGAGACA | + |
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Preference number: 4 (lower is better) Translates to: IFSCLQTEALYLLNTDLLASSLE*LEKKET Trigger: TGTCTCCTTCTTCTCTAGGCATTCCAAACTCGAGGC...TAGGAGGTCAGTGTTTAGCAGGTACAGAGCTTCTGTTTGCAAGCATGAGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR CCA 90 bp | CAAATACTCTTGAGTATAAGCCTACCCTGGGGTGTGTTCCACATACCAGGAATCATTCTTGTGAATGGCTaGCATGGAGGGCTCATTAAA | + |
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Preference number: 4 (lower is better) Translates to: QILLSISLPWGVFHIPGIILVNG*HGGLIK Trigger: TTTAATGAGCCCTCCATGCCAGCCATTCACAAGAAT...GATTCCTGGTATGTGGAACACACCCCAGGGTAGGCTTATACTCAAGAGTATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR CAA 72 bp | TCTATGAGCTTGACTCACAGGGGAATGAAACCACTCTaGCCTTTTCATGACGGGCTAATTTCATTGGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: SMSLTHRGMKPL*PFHDGLISLAV Trigger: AACTGCCAATGAAATTAGCCCGTCATGAAAAGGCAAGAGTGGTTTCATTCCCCTGTGAGTCAAGCTCATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR TCA 90 bp | TCCTCAAATACTCTTGAGTATAAGCCTACCCTGGGGTGTGTTCCACATACCAGGGTCAAAGTCTTCCAGTaGAATACCTTCAATTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SSNTLEYKPTLGCVPHTRVKVFQ*NTFNCL Trigger: AAGACAATTGAAGGTATTTCACTGGAAGACTTTGAC...CCTGGTATGTGGAACACACCCCAGGGTAGGCTTATACTCAAGAGTATTTGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR GCA 90 bp | CTTGCTTACCTGTTGAATGTTGAGGGACGCACTAATCTATGGTATAAGAATCAATTCCAGAACTCTGTGTaGTGCTGCTCTCAGCACAGA | + |
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Preference number: 4 (lower is better) Translates to: LAYLLNVEGRTNLWYKNQFQNSV*CCSQHR Trigger: TCTGTGCTGAGAGCAGCAGCACACAGAGTTCTGGAA...TTGATTCTTATACCATAGATTAGTGCGTCCCTCAACATTCAACAGGTAAGCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR TCA 90 bp | ATAAAGGACGGAGTAGCATCATATAGAAATAGCAGCAATAGCAGCACGTTTTCCACTGAAGCTTTGCAATaGGAAAATATCGGAGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: IKDGVASYRNSSNSSTFSTEALQ*ENIGAS Trigger: CGAGGCTCCGATATTTTCTCATTGCAAAGCTTCAGT...GGAAAACGTGCTGCTATTGCTGCTATTTCTATATGATGCTACTCCGTCCTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR TCA 90 bp | CTTTATCTCCAGATTAAGGTTAGAGAGGAAGCCAGGTTAAGTATCTCTAGCTTTATTAGCGGCATCTTGTaGCAGCTCTCAGAGGCATTT | + |
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Preference number: 4 (lower is better) Translates to: LYLQIKVREEARLSISSFISGIL*QLSEAF Trigger: AAATGCCTCTGAGAGCTGTCACAAGATGCCGCTAAT...AAAGCTAGAGATACTTAACCTGGCTTCCTCTCTAACCTTAATCTGGAGATAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR CCA 90 bp | AATCACATCTTAGGTTCCTCTCCCAGCAGCTACCAAATGCCAATAGCCTCTGAGTATCTTTTCTTCTGGTaGCAAATCAGGAAGAGATTT | + |
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Preference number: 4 (lower is better) Translates to: NHILGSSPSSYQMPIASEYLFFW*QIRKRF Trigger: AAATCTCTTCCTGATTTGCCACCAGAAGAAAAGATA...CTCAGAGGCTATTGGCATTTGGTAGCTGCTGGGAGAGGAACCTAAGATGTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR CAA 72 bp | ATCCACCCAAATTCAATTTGTGTTCCTCAAATACTCTaGAGTATAAGCCTACCCTGGGGTGTGTTCCACATA | + |
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Preference number: 4 (lower is better) Translates to: IHPNSICVPQIL*SISLPWGVFHI Trigger: TATGTGGAACACACCCCAGGGTAGGCTTATACTCAAGAGTATTTGAGGAACACAAATTGAATTTGGGTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR CCA 90 bp | ATTTTCTCATGCTTGCAAACAGAAGCTCTGTACCTGCTAAACACTGACCTCCTATCTGGAGGAAATCCCTaGAGATTTGCAATTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: IFSCLQTEALYLLNTDLLSGGNP*RFAISF Trigger: GAAAGAAATTGCAAATCTCCAGGGATTTCCTCCAGA...TAGGAGGTCAGTGTTTAGCAGGTACAGAGCTTCTGTTTGCAAGCATGAGAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR CCA 90 bp | ATAAAGGACGGAGTAGCATCATATAGAAATAGCAGCAATAGCAGCACGTTTTCCAGCTATCTTTTCTTCTaGTGGCAAATCAGGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: IKDGVASYRNSSNSSTFSSYLFF*WQIRKR Trigger: TCTCTTCCTGATTTGCCACCAGAAGAAAAGATAGCT...GGAAAACGTGCTGCTATTGCTGCTATTTCTATATGATGCTACTCCGTCCTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR CCA 90 bp | CTTTATCTCCAGATTAAGGTTAGAGAGGAAGCCAGGTTAAGTATCTCTAGCTTTAGGAAACCCAAATTCTaGAGGAAATCCCTGGAGATT | + |
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Preference number: 4 (lower is better) Translates to: LYLQIKVREEARLSISSFRKPKF*RKSLEI Trigger: AATCTCCAGGGATTTCCTCCAGAATTTGGGTTTCCT...AAAGCTAGAGATACTTAACCTGGCTTCCTCTCTAACCTTAATCTGGAGATAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| 3UTR CAA 72 bp | TATTCATACTCCCTCCCCTATCCACCCAAATTCAATTaGTGTTCCTCAAATACTCTTGAGTATAAGCCTACC | + |
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Preference number: 4 (lower is better) Translates to: YSYSLPYPPKFN*CSSNTLEYKPT Trigger: GGTAGGCTTATACTCAAGAGTATTTGAGGAACACAAATTGAATTTGGGTGGATAGGGGAGGGAGTATGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR GCA 90 bp | ATTTTCTCATGCTTGCAAACAGAAGCTCTGTACCTGCTAAACACTGACCTCCTAACTTTCTTCAACTACTaGATATTTTTGTGGCTCAAC | + |
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Preference number: 4 (lower is better) Translates to: IFSCLQTEALYLLNTDLLTFFNY*IFLWLN Trigger: GTTGAGCCACAAAAATATGCAGTAGTTGAAGAAAGT...TAGGAGGTCAGTGTTTAGCAGGTACAGAGCTTCTGTTTGCAAGCATGAGAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR GCA 90 bp | CTTTATCTCCAGATTAAGGTTAGAGAGGAAGCCAGGTTAAGTATCTCTAGCTTTAAATCCCTGGAGATTTaGAATTTCTTTCGGTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LYLQIKVREEARLSISSFKSLEI*NFFRCE Trigger: TTCACACCGAAAGAAATTGCAAATCTCCAGGGATTT...AAAGCTAGAGATACTTAACCTGGCTTCCTCTCTAACCTTAATCTGGAGATAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR TCA 90 bp | TATTGTTTGTATCAGCAGCCCTCTTGTAGAAGATACTTCAAAACCTTTGACATTGTCAAAGTCTTCCAGTaGAATACCTTCAATTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: YCLYQQPSCRRYFKTFDIVKVFQ*NTFNCL Trigger: AAGACAATTGAAGGTATTTCACTGGAAGACTTTGAC...AATGTCAAAGGTTTTGAAGTATCTTCTACAAGAGGGCTGCTGATACAAACAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144957.3 |
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| CDS GCA 90 bp | CCACCACATGTGCAGGGATATGACTTTCTCGCAGCGCGTGGTGCATaGCACCAATGCCACTGTACAGCTCCAGGACACGCAGAGGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: PPHVQGYDFLAARGA*HQCHCTAPGHAEVP Trigger: TGGAACCTCTGCGTGTCCTGGAGCTGTACAGTGGCATTGGTGGCATGCACCACGCGCTGCGAGAAAGTCATATCCCTGCACATGTGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124488.7 ENSMUST00000144957.3 |
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| CDS GCA 90 bp | CTCAGAGGCATTTCCAAATCCTTCACACAGGACTGTGAGGAGTTTTaGTACCACATGCACGTTGAGGCTATTGCCAAGCAGCCGGTAACG | + |
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Preference number: 5 (lower is better) Translates to: LRGISKSFTQDCEEF*YHMHVEAIAKQPVT Trigger: CGTTACCGGCTGCTTGGCAATAGCCTCAACGTGCATGTGGTAGCAAAACTCCTCACAGTCCTGTGTGAAGGATTTGGAAATGCCTCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR CAA 90 bp | CGATACTCATGGGCATATCTTCGTAGGAGAGTCACTACTGTGGCGTCCTGGTTCAGCCACAGGCTTCTATaGTTTGTATCAGCAGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: RYSWAYLRRRVTTVASWFSHRLL*FVSAAL Trigger: GAGGGCTGCTGATACAAACAATAGAAGCCTGTGGCT...GAACCAGGACGCCACAGTAGTGACTCTCCTACGAAGATATGCCCATGAGTATCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS CCA 90 bp | ATCTTTTCCAGAACTCTGTGTGCTGCTGCTCTCAGCACAGATACGTaGTCCAGTTCTCTGCACTCTTGGCTGACTTTCTTCAACTACTGC | + |
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Preference number: 5 (lower is better) Translates to: IFSRTLCAAALSTDT*SSSLHSWLTFFNYC Trigger: GCAGTAGTTGAAGAAAGTCAGCCAAGAGTGCAGAGAACTGGACCACGTATCTGTGCTGAGAGCAGCAGCACACAGAGTTCTGGAAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR CAA 90 bp | GGGGTGTGTTCCACATACCAGGAATCACATCTTAGGTTCCTCTCCCAGCAGCTACAGTTCTCTGCACTCTaGGCTGACTTTCTTCAACTA | + |
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Preference number: 5 (lower is better) Translates to: GVCSTYQESHLRFLSQQLQFSAL*ADFLQL Trigger: TAGTTGAAGAAAGTCAGCCAAGAGTGCAGAGAACTG...TAGCTGCTGGGAGAGGAACCTAAGATGTGATTCCTGGTATGTGGAACACACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS GCA 90 bp | TACTTCATTAGCAACAGTATTCACATCAATAGCAGCCACCACATGTaGAGGGATATGACTTTCTCGCAGCGCGTGGTGCATGCCACCAAT | + |
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Preference number: 5 (lower is better) Translates to: YFISNSIHINSSHHM*RDMTFSQRVVHATN Trigger: ATTGGTGGCATGCACCACGCGCTGCGAGAAAGTCATATCCCTGCACATGTGGTGGCTGCTATTGATGTGAATACTGTTGCTAATGAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124488.7 ENSMUST00000144957.3 |
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| CDS CCA 90 bp | GCTGCTGCTCTCAGCACAGATACGTGGTCCAGTTCTCTGCACTCTTaGCTGACTTTCTTCAACTACTGCATATTTTTGTGGCTCAACAGT | + |
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Preference number: 5 (lower is better) Translates to: AAALSTDTWSSSLHS*LTFFNYCIFLWLNS Trigger: ACTGTTGAGCCACAAAAATATGCAGTAGTTGAAGAAAGTCAGCCAAGAGTGCAGAGAACTGGACCACGTATCTGTGCTGAGAGCAGCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR CAA 90 bp | GGGGTGTGTTCCACATACCAGGAATCACATCTTAGGTTCCTCTCCCAGCAGCTATATCGCAGCAATAACTaGGGTGGTAAAAGGTACTCA | + |
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Preference number: 5 (lower is better) Translates to: GVCSTYQESHLRFLSQQLYRSNN*GGKRYS Trigger: TGAGTACCTTTTACCACCCAAGTTATTGCTGCGATA...TAGCTGCTGGGAGAGGAACCTAAGATGTGATTCCTGGTATGTGGAACACACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS TCA 90 bp | CTGCTCTCAGCACAGATACGTGGTCCAGTTCTCTGCACTCTTGGCTaGCTTTCTTCAACTACTGCATATTTTTGTGGCTCAACAGTTACA | + |
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Preference number: 5 (lower is better) Translates to: LLSAQIRGPVLCTLG*LSSTTAYFCGSTVT Trigger: TGTAACTGTTGAGCCACAAAAATATGCAGTAGTTGAAGAAAGTCAGCCAAGAGTGCAGAGAACTGGACCACGTATCTGTGCTGAGAGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS CCA 90 bp | TGGGCTTCACGATATCTAGTAAGAGAGCGTATCGCAGCAATAACTTaGGTGGTAAAAGGTACTCATCTGTGTCGCCATCTTCAAGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: WASRYLVRERIAAIT*VVKGTHLCRHLQGS Trigger: ACTTCCTTGAAGATGGCGACACAGATGAGTACCTTTTACCACCCAAGTTATTGCTGCGATACGCTCTCTTACTAGATATCGTGAAGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR CAA 90 bp | CAAATACTCTTGAGTATAAGCCTACCCTGGGGTGTGTTCCACATACCAGGAATCAACGCTGTTTCACTGTaGTCTTCTCAGGAAACCCAA | + |
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Preference number: 5 (lower is better) Translates to: QILLSISLPWGVFHIPGINAVSL*SSQETQ Trigger: TTGGGTTTCCTGAGAAGACAACAGTGAAACAGCGTT...GATTCCTGGTATGTGGAACACACCCCAGGGTAGGCTTATACTCAAGAGTATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS CCA 90 bp | CCGGTAACGCTGTTTCACTGTTGTCTTCTCAGGAAACCCAAATTCTaGAGGAAATCCCTGGAGATTTGCAATTTCTTTCGGTGTGAAATA | + |
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Preference number: 5 (lower is better) Translates to: PVTLFHCCLLRKPKF*RKSLEICNFFRCEI Trigger: TATTTCACACCGAAAGAAATTGCAAATCTCCAGGGATTTCCTCCAGAATTTGGGTTTCCTGAGAAGACAACAGTGAAACAGCGTTACCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS TCA 90 bp | CAAGATAGAATCTTGGAATTACTATCTAGAATTAGCGGCATCTTGTaGCAGCTCTCAGAGGCATTTCCAAATCCTTCACACAGGACTGTG | + |
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Preference number: 5 (lower is better) Translates to: QDRILELLSRISGIL*QLSEAFPNPSHRTV Trigger: CACAGTCCTGTGTGAAGGATTTGGAAATGCCTCTGAGAGCTGTCACAAGATGCCGCTAATTCTAGATAGTAATTCCAAGATTCTATCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR CAA 90 bp | CTTGCTTACCTGTTGAATGTTGAGGGACGCACTAATCTATGGTATAAGAATCAAGAGGTCACTGTCTTGTaGATGTTTCCTGTCCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: LAYLLNVEGRTNLWYKNQEVTVL*MFPVPF Trigger: GAAAGGGACAGGAAACATCAACAAGACAGTGACCTC...TTGATTCTTATACCATAGATTAGTGCGTCCCTCAACATTCAACAGGTAAGCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS-3UTR CAA 90 bp | ATATCTAGAATATACAAGAAGCTAGTTGTCCTTGGATCGGTCATATCCCCCTGTGTGAAATACCTTCAATaGTCTTTGACAGTAAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: ISRIYKKLVVLGSVISPCVKYLQ*SLTVSE Trigger: CTCACTTACTGTCAAAGACAATTGAAGGTATTTCAC...ACAGGGGGATATGACCGATCCAAGGACAACTAGCTTCTTGTATATTCTAGATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144957.3 |
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| CDS-3UTR CAA 90 bp | CTTTATCTCCAGATTAAGGTTAGAGAGGAAGCCAGGTTAAGTATCTCTAGCTTTGTGAAATACCTTCAATaGTCTTTGACAGTAAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: LYLQIKVREEARLSISSFVKYLQ*SLTVSE Trigger: CTCACTTACTGTCAAAGACAATTGAAGGTATTTCAC...AAAGCTAGAGATACTTAACCTGGCTTCCTCTCTAACCTTAATCTGGAGATAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS GCA 72 bp | GTGCAGGGATATGACTTTCTCGCAGCGCGTGGTGCATaGCACCAATGCCACTGTACAGCTCCAGGACACGCA | + |
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Preference number: 6 (lower is better) Translates to: VQGYDFLAARGA*HQCHCTAPGHA Trigger: TGCGTGTCCTGGAGCTGTACAGTGGCATTGGTGGCATGCACCACGCGCTGCGAGAAAGTCATATCCCTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124488.7 ENSMUST00000144957.3 |
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| CDS GCA 72 bp | TATGACTTTCTCGCAGCGCGTGGTGCATGCCACCAATaGCACTGTACAGCTCCAGGACACGCAGAGGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: YDFLAARGACHQ*HCTAPGHAEVP Trigger: TGGAACCTCTGCGTGTCCTGGAGCTGTACAGTGGCATTGGTGGCATGCACCACGCGCTGCGAGAAAGTCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124488.7 ENSMUST00000144957.3 |
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| CDS TCA 72 bp | TTCACATCAATAGCAGCCACCACATGTGCAGGGATATaGCTTTCTCGCAGCGCGTGGTGCATGCCACCAATG | + |
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Preference number: 6 (lower is better) Translates to: FTSIAATTCAGI*LSRSAWCMPPM Trigger: CATTGGTGGCATGCACCACGCGCTGCGAGAAAGTCATATCCCTGCACATGTGGTGGCTGCTATTGATGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124488.7 ENSMUST00000144957.3 |
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| CDS GCA 72 bp | AGCAACAGTATTCACATCAATAGCAGCCACCACATGTaGAGGGATATGACTTTCTCGCAGCGCGTGGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: SNSIHINSSHHM*RDMTFSQRVVH Trigger: ATGCACCACGCGCTGCGAGAAAGTCATATCCCTGCACATGTGGTGGCTGCTATTGATGTGAATACTGTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124488.7 ENSMUST00000144957.3 |
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| CDS TCA 72 bp | CCTGGAAGGGGAAAGGCTCTGACTGAAGCTTTGCAATaGGAAAATATCGGAGCCTCGAGTTTGGAATGCCTA | + |
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Preference number: 6 (lower is better) Translates to: PGRGKALTEALQ*ENIGASSLECL Trigger: TAGGCATTCCAAACTCGAGGCTCCGATATTTTCTCATTGCAAAGCTTCAGTCAGAGCCTTTCCCCTTCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS GCA 72 bp | AGAGAATGGTATCTTTTCCAGAACTCTGTGTGCTGCTaGTCTCAGCACAGATACGTGGTCCAGTTCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: REWYLFQNSVCC*SQHRYVVQFSA Trigger: TGCAGAGAACTGGACCACGTATCTGTGCTGAGAGCAGCAGCACACAGAGTTCTGGAAAAGATACCATTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS CAA 90 bp | TGCTGCTGCTCTCAGCACAGATACGTGGTCCAGTTCTCTGCACTCTaGGCTGACTTTCTTCAACTACTGCATATTTTTGTGGCTCAACAG | + |
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Preference number: 6 (lower is better) Translates to: CCCSQHRYVVQFSAL*ADFLQLLHIFVAQQ Trigger: CTGTTGAGCCACAAAAATATGCAGTAGTTGAAGAAAGTCAGCCAAGAGTGCAGAGAACTGGACCACGTATCTGTGCTGAGAGCAGCAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS CAA 90 bp | GTGGGCTTCACGATATCTAGTAAGAGAGCGTATCGCAGCAATAACTaGGGTGGTAAAAGGTACTCATCTGTGTCGCCATCTTCAAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: VGFTISSKRAYRSNN*GGKRYSSVSPSSRK Trigger: CTTCCTTGAAGATGGCGACACAGATGAGTACCTTTTACCACCCAAGTTATTGCTGCGATACGCTCTCTTACTAGATATCGTGAAGCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS TCA 72 bp | TTGGATCGGTCATATCCCCCTGTAGGCCAATTCTTGTaGATGGCTGGCATGGAGGGCTCATTAAAATCATAT | + |
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Preference number: 6 (lower is better) Translates to: LDRSYPPVGQFL*MAGMEGSLKSY Trigger: ATATGATTTTAATGAGCCCTCCATGCCAGCCATTCACAAGAATTGGCCTACAGGGGGATATGACCGATCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS TCA 72 bp | GCACAGATACGTGGTCCAGTTCTCTGCACTCTTGGCTaGCTTTCTTCAACTACTGCATATTTTTGTGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: AQIRGPVLCTLG*LSSTTAYFCGS Trigger: TGAGCCACAAAAATATGCAGTAGTTGAAGAAAGTCAGCCAAGAGTGCAGAGAACTGGACCACGTATCTGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS CCA 72 bp | CTCAGCACAGATACGTGGTCCAGTTCTCTGCACTCTTaGCTGACTTTCTTCAACTACTGCATATTTTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LSTDTWSSSLHS*LTFFNYCIFLW Trigger: CCACAAAAATATGCAGTAGTTGAAGAAAGTCAGCCAAGAGTGCAGAGAACTGGACCACGTATCTGTGCTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS CCA 72 bp | CGATATCTAGTAAGAGAGCGTATCGCAGCAATAACTTaGGTGGTAAAAGGTACTCATCTGTGTCGCCATCTT | + |
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Preference number: 6 (lower is better) Translates to: RYLVRERIAAIT*VVKGTHLCRHL Trigger: AAGATGGCGACACAGATGAGTACCTTTTACCACCCAAGTTATTGCTGCGATACGCTCTCTTACTAGATATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS CAA 72 bp | TCTCAGCACAGATACGTGGTCCAGTTCTCTGCACTCTaGGCTGACTTTCTTCAACTACTGCATATTTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: SQHRYVVQFSAL*ADFLQLLHIFV Trigger: CACAAAAATATGCAGTAGTTGAAGAAAGTCAGCCAAGAGTGCAGAGAACTGGACCACGTATCTGTGCTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS CAA 72 bp | ACGATATCTAGTAAGAGAGCGTATCGCAGCAATAACTaGGGTGGTAAAAGGTACTCATCTGTGTCGCCATCT | + |
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Preference number: 6 (lower is better) Translates to: TISSKRAYRSNN*GGKRYSSVSPS Trigger: AGATGGCGACACAGATGAGTACCTTTTACCACCCAAGTTATTGCTGCGATACGCTCTCTTACTAGATATCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS CCA 72 bp | CTGTTTCACTGTTGTCTTCTCAGGAAACCCAAATTCTaGAGGAAATCCCTGGAGATTTGCAATTTCTTTCGG | + |
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Preference number: 6 (lower is better) Translates to: LFHCCLLRKPKF*RKSLEICNFFR Trigger: CCGAAAGAAATTGCAAATCTCCAGGGATTTCCTCCAGAATTTGGGTTTCCTGAGAAGACAACAGTGAAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS CAA 90 bp | ATCTTCAAGGAAGTCTTTCAGCATCTGCACAGAGAGGTCACTGTCTaGTTGATGTTTCCTGTCCCTTTCTTCTACAGTCTCAAGCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: IFKEVFQHLHREVTV*LMFPVPFFYSLKLK Trigger: TTTAAGCTTGAGACTGTAGAAGAAAGGGACAGGAAACATCAACAAGACAGTGACCTCTCTGTGCAGATGCTGAAAGACTTCCTTGAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS TCA 72 bp | ATCTTGGAATTACTATCTAGAATTAGCGGCATCTTGTaGCAGCTCTCAGAGGCATTTCCAAATCCTTCACAC | + |
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Preference number: 6 (lower is better) Translates to: ILELLSRISGIL*QLSEAFPNPSH Trigger: GTGTGAAGGATTTGGAAATGCCTCTGAGAGCTGTCACAAGATGCCGCTAATTCTAGATAGTAATTCCAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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| CDS CAA 72 bp | GTGAATGGCTGGCATGGAGGGCTCATTAAAATCATATaGAAAGATAGCTTGTCAAAGTCTTCCAGTGAAATA | + |
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Preference number: 6 (lower is better) Translates to: VNGWHGGLIKII*KDSLSKSSSEI Trigger: TATTTCACTGGAAGACTTTGACAAGCTATCTTTCAATATGATTTTAATGAGCCCTCCATGCCAGCCATTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124488.7 ENSMUST00000144957.3 |
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| CDS CAA 72 bp | AAACTCTTGATACTGAAAGCCACAGGCTTCTATTGTTaGTATCAGCAGCCCTCTTGTAGAAGATACTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: KLLILKATGFYC*YQQPSCRRYFK Trigger: TTTGAAGTATCTTCTACAAGAGGGCTGCTGATACAAACAATAGAAGCCTGTGGCTTTCAGTATCAAGAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124488.7 |
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