Pregenerated sensors for TRDC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000104876Ensembl transcript IDs: ENSMUST00000196323.2
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAGAAAGTCACATGCCAGGTTGTCAGGCATCTGGCACTCCCAAGTaGCTAGGAACGAAAGGCCTGGCCACAGCCAGGAAAGACTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: TESHMPGCQASGTPK*LGTKGLATARKDSG Trigger: GCCAGAGTCTTTCCTGGCTGTGGCCAGGCCTTTCGTTCCTAGTCACTTGGGAGTGCCAGATGCCTGACAACCTGGCATGTGACTTTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR GCA 90 bp | TGGATGCTGCAGGGTGGCAGAAGACATCCCAGGCAAAGGGTGGCTTaGTTGGTTGCTTTTCCCTGGGTGGACCCAGCTTATCCATTTAGG | + |
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Preference number: 1 (lower is better) Translates to: WMLQGGRRHPRQRVA*LVAFPWVDPAYPFR Trigger: CCTAAATGGATAAGCTGGGTCCACCCAGGGAAAAGCAACCAAGCAAGCCACCCTTTGCCTGGGATGTCTTCTGCCACCCTGCAGCATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR CCA 90 bp | GCATTTGGATGCTGCAGGGTGGCAGAAGACATCCCAGGCAAAGGGTaGCTTGCTTGGTTGCTTTTCCCTGGGTGGACCCAGCTTATCCAT | + |
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Preference number: 1 (lower is better) Translates to: AFGCCRVAEDIPGKG*LAWLLFPGWTQLIH Trigger: ATGGATAAGCTGGGTCCACCCAGGGAAAAGCAACCAAGCAAGCCACCCTTTGCCTGGGATGTCTTCTGCCACCCTGCAGCATCCAAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR CCA 90 bp | GACATCCCAGGCAAAGGGTGGCTTGCTTGGTTGCTTTTCCCTGGGTaGACCCAGCTTATCCATTTAGGTTTGCCTGAACCCAGTGACACA | + |
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Preference number: 1 (lower is better) Translates to: DIPGKGWLAWLLFPG*TQLIHLGLPEPSDT Trigger: TGTGTCACTGGGTTCAGGCAAACCTAAATGGATAAGCTGGGTCCACCCAGGGAAAAGCAACCAAGCAAGCCACCCTTTGCCTGGGATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR TCA 90 bp | GGGGCGGGTCACATCCCTACTCCTGCTTCCAAAACACTTGCACAGTaGGTTGTTTGCAGGCCGGGCACAGGTATTAATTCTGTACTCTCT | + |
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Preference number: 1 (lower is better) Translates to: GAGHIPTPASKTLAQ*VVCRPGTGINSVLS Trigger: AGAGAGTACAGAATTAATACCTGTGCCCGGCCTGCAAACAACTCACTGTGCAAGTGTTTTGGAAGCAGGAGTAGGGATGTGACCCGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR TCA 90 bp | GTGATACAGGGAGCCCCTGGGACAGTAACTTTGGGCTGTCAGTCTTaGGACCTTGGTTTCGTTTCCAGCCATATCTCTGCCTCACCGAAT | + |
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Preference number: 1 (lower is better) Translates to: VIQGAPGTVTLGCQS*DLGFVSSHISASPN Trigger: ATTCGGTGAGGCAGAGATATGGCTGGAAACGAAACCAAGGTCTCAAGACTGACAGCCCAAAGTTACTGTCCCAGGGGCTCCCTGTATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR TCA 90 bp | CAAGGCCAACAGAACCTTCCATCTGGTGATCTCTCCAGTGAGCCTTaGAGACAGCGCTACTTATTACTGTGCCTCGGGGTATCACTGTGG | + |
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Preference number: 1 (lower is better) Translates to: QGQQNLPSGDLSSEP*RQRYLLLCLGVSLW Trigger: CCACAGTGATACCCCGAGGCACAGTAATAAGTAGCGCTGTCTTCAAGGCTCACTGGAGAGATCACCAGATGGAAGGTTCTGTTGGCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR GCA 90 bp | GAGGATGCAATCTTTTCTAACACCTTCGGAATAGCATTTGGATGCTaGAGGGTGGCAGAAGACATCCCAGGCAAAGGGTGGCTTGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: EDAIFSNTFGIAFGC*RVAEDIPGKGWLAW Trigger: CCAAGCAAGCCACCCTTTGCCTGGGATGTCTTCTGCCACCCTGCAGCATCCAAATGCTATTCCGAAGGTGTTAGAAAAGATTGCATCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR CCA 90 bp | AGGAGCACAGCACCTCTCACTCTGGGTTCAATGGGCCTTTGTCAATaGAGTCACTTGTGGTTGGCTATGGAGAACTACAGCTTGAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: RSTAPLTLGSMGLCQ*SHLWLAMENYSLRN Trigger: GTTCCTCAAGCTGTAGTTCTCCATAGCCAACCACAAGTGACTCCATTGACAAAGGCCCATTGAACCCAGAGTGAGAGGTGCTGTGCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR GCA 90 bp | GTTTGCAGGCCGGGCACAGGTATTAATTCTGTACTCTCTGCATTGTaGCTGGGACTCAGCTGGTTTGTGCAGACAAAGTCAGTTCACAGA | + |
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Preference number: 1 (lower is better) Translates to: VCRPGTGINSVLSAL*LGLSWFVQTKSVHR Trigger: TCTGTGAACTGACTTTGTCTGCACAAACCAGCTGAGTCCCAGGCACAATGCAGAGAGTACAGAATTAATACCTGTGCCCGGCCTGCAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR GCA 90 bp | ACAGTCTCCTCATCTCACAGCTGGTTCACGACAGCTAGGAATGCATaGTGTATTTCTAGCACTTGTTGCAGCTACGTGCTAGGAGGCGTT | + |
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Preference number: 1 (lower is better) Translates to: TVSSSHSWFTTARNA*CISSTCCSYVLGGV Trigger: AACGCCTCCTAGCACGTAGCTGCAACAAGTGCTAGAAATACAGCATGCATTCCTAGCTGTCGTGAACCAGCTGTGAGATGAGGAGACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR CCA 90 bp | GAGAGAGAAACAATTTCAGGGATGCAGAGGACCACTGAGAGGGAGTaGGAATGTGAGAGTAATGGAGGTGGTGGTGGATCTGAACGAGAT | + |
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Preference number: 1 (lower is better) Translates to: ERETISGMQRTTERE*ECESNGGGGGSERD Trigger: ATCTCGTTCAGATCCACCACCACCTCCATTACTCTCACATTCCCACTCCCTCTCAGTGGTCCTCTGCATCCCTGAAATTGTTTCTCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR TCA 90 bp | ATTAAAGTTATTAGATACAGACTCGGGGATGGGAGAGCCCAGATGTaGGGAACAGTCTCCTCATCTCACAGCTGGTTCACGACAGCTAGG | + |
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Preference number: 1 (lower is better) Translates to: IKVIRYRLGDGRAQM*GTVSSSHSWFTTAR Trigger: CCTAGCTGTCGTGAACCAGCTGTGAGATGAGGAGACTGTTCCTCACATCTGGGCTCTCCCATCCCCGAGTCTGTATCTAATAACTTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR GCA 90 bp | AAAGAGGATGCAATCTTTTCTAACACCTTCGGAATAGCATTTGGATaGTGCAGGGTGGCAGAAGACATCCCAGGCAAAGGGTGGCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: KEDAIFSNTFGIAFG*CRVAEDIPGKGWLA Trigger: AGCAAGCCACCCTTTGCCTGGGATGTCTTCTGCCACCCTGCAGCATCCAAATGCTATTCCGAAGGTGTTAGAAAAGATTGCATCCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR GCA 90 bp | GAGACTCCAAGTGGACTCTTAAACCCACCCCTATCTTCTTCTTTCTaGATCTTGATGTGCTATGTCATGTGCCCTAGGCACTCTCCGATG | + |
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Preference number: 1 (lower is better) Translates to: ETPSGLLNPPLSSSF*ILMCYVMCPRHSPM Trigger: CATCGGAGAGTGCCTAGGGCACATGACATAGCACATCAAGATGCAGAAAGAAGAAGATAGGGGTGGGTTTAAGAGTCCACTTGGAGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR GCA 90 bp | ATATCTCAAGTCCATGCTGTTCCCCGTGAGGATATCAGAATGGTGTaGCAAGGACACCATTGTCAGCGTTTTTATCTCTGTGGTTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: ISQVHAVPREDIRMV*QGHHCQRFYLCGCP Trigger: TGGGCAACCACAGAGATAAAAACGCTGACAATGGTGTCCTTGGCACACCATTCTGATATCCTCACGGGGAACAGCATGGACTTGAGATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR CCA 90 bp | CCTCTCACTCTGGGTTCAATGGGCCTTTGTCAATGGAGTCACTTGTaGTTGGCTATGGAGAACTACAGCTTGAGGAACTACCATATCTCA | + |
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Preference number: 1 (lower is better) Translates to: PLTLGSMGLCQWSHL*LAMENYSLRNYHIS Trigger: TGAGATATGGTAGTTCCTCAAGCTGTAGTTCTCCATAGCCAACCACAAGTGACTCCATTGACAAAGGCCCATTGAACCCAGAGTGAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR TCA 90 bp | ACTAATAGCTCTGAGCATCATTCTCCCCTGGTAGTCACTTCACACTaGGTGAAGCCAGAGGTGAACGGCTTAATAAATGCAAGAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: TNSSEHHSPLVVTSH*VKPEVNGLINAREA Trigger: TGCCTCTCTTGCATTTATTAAGCCGTTCACCTCTGGCTTCACTCAGTGTGAAGTGACTACCAGGGGAGAATGATGCTCAGAGCTATTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR CCA 90 bp | GCGAAATTCATCGTCCTGCTATGCTATGCTAGGTTTTATTTTTCCTaGCATGGCGGGTCAGAGTTGTCTCATTTGTTGCTGACAAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: AKFIVLLCYARFYFS*HGGSELSHLLLTRG Trigger: GCCTCTTGTCAGCAACAAATGAGACAACTCTGACCCGCCATGCCAGGAAAAATAAAACCTAGCATAGCATAGCAGGACGATGAATTTCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR CCA 90 bp | CTACCATATCTCAAGTCCATGCTGTTCCCCGTGAGGATATCAGAATaGTGTGCCAAGGACACCATTGTCAGCGTTTTTATCTCTGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: LPYLKSMLFPVRISE*CAKDTIVSVFISVV Trigger: AACCACAGAGATAAAAACGCTGACAATGGTGTCCTTGGCACACCATTCTGATATCCTCACGGGGAACAGCATGGACTTGAGATATGGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR CCA 90 bp | CAGAATGGTGTGCCAAGGACACCATTGTCAGCGTTTTTATCTCTGTaGTTGCCCAGTCATTACTGTGTATTAGTAGGCTTTCTCGTTGAG | + |
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Preference number: 1 (lower is better) Translates to: QNGVPRTPLSAFLSL*LPSHYCVLVGFLVE Trigger: CTCAACGAGAAAGCCTACTAATACACAGTAATGACTGGGCAACCACAGAGATAAAAACGCTGACAATGGTGTCCTTGGCACACCATTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR GCA 90 bp | ATAGAGTGGAGAATAATTAGATGCGATCTTAGAAGCTTTATTGTCTaGTTGGAGAGCATTAAGGAAGCCAAGTGTGAGTTTGTTTGTAAA | + |
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Preference number: 1 (lower is better) Translates to: IEWRIIRCDLRSFIV*LESIKEAKCEFVCK Trigger: TTTACAAACAAACTCACACTTGGCTTCCTTAATGCTCTCCAAGCAGACAATAAAGCTTCTAAGATCGCATCTAATTATTCTCCACTCTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCGCTACTTATTACTGTGCCTCGGGGTATCACTGTGGTGCAGGTGCCCAGGGGGGAGTCACAGGATGTaGTTCCCCGCTCCTGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: QRYLLLCLGVSLWCRCPGGSHRM*FPAPAF Trigger: GAAGGCAGGAGCGGGGAACCACATCCTGTGACTCCC...CCCTGGGCACCTGCACCACAGTGATACCCCGAGGCACAGTAATAAGTAGCGCTG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR TCA 90 bp | TCGGGGTATCACTGTGGTGCAGGTGCCCAGGGAGCCTGTACCCAAACCCCTGGAGTCAGTCTGAAGCACTaGGAAGTTGGAAGCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: SGYHCGAGAQGACTQTPGVSLKH*EVGSLG Trigger: TCCCAGGCTTCCAACTTCTCAGTGCTTCAGACTGAC...TCCAGGGGTTTGGGTACAGGCTCCCTGGGCACCTGCACCACAGTGATACCCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR GCA 90 bp | CGCTACTTATTACTGTGCCTCGGGGTATCACTGTGGTGCAGGTGCCCAGGGAGCGTGGTTCCCCGCTCCTaGCTTCTGTCTTCACACACA | + |
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Preference number: 2 (lower is better) Translates to: RYLLLCLGVSLWCRCPGSVVPRS*LLSSHT Trigger: TGTGTGTGAAGACAGAAGGCAGGAGCGGGGAACCAC...GCTCCCTGGGCACCTGCACCACAGTGATACCCCGAGGCACAGTAATAAGTAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGCCTGGCCACAGCCAGGAAAGACTCTGGCTTCCAAGGAGCACAGCACCTCTGAACGGCTTAATAAATaGAAGAGAGGCAGGCCCGAG | + |
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Preference number: 2 (lower is better) Translates to: KAWPQPGKTLASKEHSTSERLNK*KRGRPE Trigger: CTCGGGCCTGCCTCTCTTGCATTTATTAAGCCGTTC...AGAGGTGCTGTGCTCCTTGGAAGCCAGAGTCTTTCCTGGCTGTGGCCAGGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCGCTACTTATTACTGTGCCTCGGGGTATCACTGTGGTGCAGGTGCCCAGGGATCCCAGGCAAAGGGTaGCTTGCTTGGTTGCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: QRYLLLCLGVSLWCRCPGIPGKG*LAWLLF Trigger: GAAAAGCAACCAAGCAAGCCACCCTTTGCCTGGGAT...CCCTGGGCACCTGCACCACAGTGATACCCCGAGGCACAGTAATAAGTAGCGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR TCA 90 bp | CGCTACTTATTACTGTGCCTCGGGGTATCACTGTGGTGCAGGTGCCCAGGGAGCGAGGCGTTGTCAAAATaGATTTGGGAGGGGGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: RYLLLCLGVSLWCRCPGSEALSK*IWEGVC Trigger: ACAAACCCCCTCCCAAATTCATTTTGACAACGCCTC...GCTCCCTGGGCACCTGCACCACAGTGATACCCCGAGGCACAGTAATAAGTAGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR GCA 90 bp | TCGGGGTATCACTGTGGTGCAGGTGCCCAGGGAGCCTGTACCCAAACCCCTGGATCACACCATGACCCCTaGTTTATACTTCTCATAGGA | + |
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Preference number: 2 (lower is better) Translates to: SGYHCGAGAQGACTQTPGSHHDP*FILLIG Trigger: TCCTATGAGAAGTATAAAGCAGGGGTCATGGTGTGA...TCCAGGGGTTTGGGTACAGGCTCCCTGGGCACCTGCACCACAGTGATACCCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCTTCCACAGAAAGTCACATGCCAGGTTGTCAGGCATCTGGCACTCCCAAAAAGGGTGGCTTGCTTaGTTGCTTTTCCCTGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: SPFHRKSHARLSGIWHSQKGWLA*LLFPGW Trigger: CCACCCAGGGAAAAGCAACCAAGCAAGCCACCCTTT...TTGGGAGTGCCAGATGCCTGACAACCTGGCATGTGACTTTCTGTGGAAGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCTGGCCACAGCCAGGAAAGACTCTGGCTTCCAAGGAGCACAGCACCTCTACCACTGAGAGGGAGTaGGAATGTGAGAGTAATGGA | + |
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Preference number: 2 (lower is better) Translates to: KAWPQPGKTLASKEHSTSTTERE*ECESNG Trigger: TCCATTACTCTCACATTCCCACTCCCTCTCAGTGGT...AGAGGTGCTGTGCTCCTTGGAAGCCAGAGTCTTTCCTGGCTGTGGCCAGGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR CAA 90 bp | ATGCTGCAGGGTGGCAGAAGACATCCCAGGCAAAGGGTGGCTTGCTaGGTTGCTTTTCCCTGGGTGGACCCAGCTTATCCATTTAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: MLQGGRRHPRQRVAC*VAFPWVDPAYPFRF Trigger: AAACCTAAATGGATAAGCTGGGTCCACCCAGGGAAAAGCAACCAAGCAAGCCACCCTTTGCCTGGGATGTCTTCTGCCACCCTGCAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR CAA 90 bp | GGTGATACAGGGAGCCCCTGGGACAGTAACTTTGGGCTGTCAGTCTaGAGACCTTGGTTTCGTTTCCAGCCATATCTCTGCCTCACCGAA | + |
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Preference number: 2 (lower is better) Translates to: GDTGSPWDSNFGLSV*RPWFRFQPYLCLTE Trigger: TTCGGTGAGGCAGAGATATGGCTGGAAACGAAACCAAGGTCTCAAGACTGACAGCCCAAAGTTACTGTCCCAGGGGCTCCCTGTATCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR TCA 90 bp | GAATGGAATGCCAGAAGCACAGGAAGCTGTGATGTGACTGACACGCTCAGCCTGAAAACACTTGCACAGTaGGTTGTTTGCAGGCCGGGC | + |
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Preference number: 2 (lower is better) Translates to: EWNARSTGSCDVTDTLSLKTLAQ*VVCRPG Trigger: GCCCGGCCTGCAAACAACTCACTGTGCAAGTGTTTT...CAGGCTGAGCGTGTCAGTCACATCACAGCTTCCTGTGCTTCTGGCATTCCATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR TCA 90 bp | CACCATGACCCCTGCTTTATACTTCTCATAGGAACTGAGGGAACCACGGTATTGCAGGAAGCTGTGATGTaGCTGACACGCTCAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: HHDPCFILLIGTEGTTVLQEAVM*LTRSAW Trigger: CCAGGCTGAGCGTGTCAGTCACATCACAGCTTCCTG...CAATACCGTGGTTCCCTCAGTTCCTATGAGAAGTATAAAGCAGGGGTCATGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCGTGAGGATATCAGAATGGTGTGCCAAGGACACCATTGTCAGCGTTTTTATAAGCTGTGGCCTTGCTaGGCTGGGGTTAGCAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: PREDIRMVCQGHHCQRFYKLWPC*AGVSRA Trigger: AGCTCTGCTAACCCCAGCTCAGCAAGGCCACAGCTT...ATAAAAACGCTGACAATGGTGTCCTTGGCACACCATTCTGATATCCTCACGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR CAA 90 bp | GCTTGGTTGCTTTTCCCTGGGTGGACCCAGCTTATCCATTTAGGTTaGCCTGAACCCAGTGACACACAGCATCATCCCATCCCTTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: AWLLFPGWTQLIHLG*PEPSDTQHHPIPWF Trigger: AAACCAAGGGATGGGATGATGCTGTGTGTCACTGGGTTCAGGCAAACCTAAATGGATAAGCTGGGTCCACCCAGGGAAAAGCAACCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCTGGCCACAGCCAGGAAAGACTCTGGCTTCCAAGGAGCACAGCACCTCTCAATTGGCAGTGATAATTaGTCTTTCAAACATCACACC | + |
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Preference number: 2 (lower is better) Translates to: GLATARKDSGFQGAQHLSIGSDN*SFKHHT Trigger: GGTGTGATGTTTGAAAGAGCAATTATCACTGCCAAT...TGAGAGGTGCTGTGCTCCTTGGAAGCCAGAGTCTTTCCTGGCTGTGGCCAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTGAACGGCTTAATAAATGCAAGAGAGGCAGGCCCGAGAAGAAAGGCAGATCTCTGCATTGTGCCTaGGACTCAGCTGGTTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: RGERLNKCKRGRPEKKGRSLHCA*DSAGLC Trigger: GCACAAACCAGCTGAGTCCCAGGCACAATGCAGAGA...TCTGCCTTTCTTCTCGGGCCTGCCTCTCTTGCATTTATTAAGCCGTTCACCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCTTCCACAGAAAGTCACATGCCAGGTTGTCAGGCATCTGGCACTCCCAAAGGTTTTATTTTTCCTaGCATGGCGGGTCAGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: SPFHRKSHARLSGIWHSQRFYFS*HGGSEL Trigger: CAACTCTGACCCGCCATGCCAGGAAAAATAAAACCT...TTGGGAGTGCCAGATGCCTGACAACCTGGCATGTGACTTTCTGTGGAAGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR TCA 90 bp | GAATGGAATGCCAGAAGCACAGGAAGCTGTGATGTGACTGACACGCTCAGCCTGAGTCAGTTCACAGAATaGGTGTCCTTCCTTTCGGTA | + |
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Preference number: 2 (lower is better) Translates to: EWNARSTGSCDVTDTLSLSQFTE*VSFLSV Trigger: TACCGAAAGGAAGGACACTCATTCTGTGAACTGACT...CAGGCTGAGCGTGTCAGTCACATCACAGCTTCCTGTGCTTCTGGCATTCCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGGCTTTCTCGTTGAGACTCCAAGTGGACTCTTAAACCCACCCCTATCTTCTGGGAGGGGGTTTGTGTaGACTTCAGACACAGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: VGFLVETPSGLLNPPLSSGRGFV*TSDTVS Trigger: GCTTACTGTGTCTGAAGTGCACACAAACCCCCTCCC...AGAAGATAGGGGTGGGTTTAAGAGTCCACTTGGAGTCTCAACGAGAAAGCCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAGGAGTGCCCTCCCCATCCCCCTTCCACAGAAAGTCACATGCCAGGTTGTCGCGTTTTTATCTCTGTaGTTGCCCAGTCATTACTGT | + |
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Preference number: 2 (lower is better) Translates to: FRSALPIPLPQKVTCQVVAFLSL*LPSHYC Trigger: ACAGTAATGACTGGGCAACCACAGAGATAAAAACGC...GACAACCTGGCATGTGACTTTCTGTGGAAGGGGGATGGGGAGGGCACTCCTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR CAA 90 bp | GCACCTCTCACTCTGGGTTCAATGGGCCTTTGTCAATGGAGTCACTaGTGGTTGGCTATGGAGAACTACAGCTTGAGGAACTACCATATC | + |
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Preference number: 2 (lower is better) Translates to: APLTLGSMGLCQWSH*WLAMENYSLRNYHI Trigger: GATATGGTAGTTCCTCAAGCTGTAGTTCTCCATAGCCAACCACAAGTGACTCCATTGACAAAGGCCCATTGAACCCAGAGTGAGAGGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCGGAATAGCATTTGGATGCTGCAGGGTGGCAGAAGACATCCCAGGCAAAGGTCAAACATCACACCATaGCCCCTGCTTTATACTTCT | + |
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Preference number: 2 (lower is better) Translates to: LRNSIWMLQGGRRHPRQRSNITP*PLLYTS Trigger: AGAAGTATAAAGCAGGGGTCATGGTGTGATGTTTGA...CCTTTGCCTGGGATGTCTTCTGCCACCCTGCAGCATCCAAATGCTATTCCGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCGGAATAGCATTTGGATGCTGCAGGGTGGCAGAAGACATCCCAGGCAAAGGTGCTTCCAAAACACTTaGACAGTGAGTTGTTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LRNSIWMLQGGRRHPRQRCFQNT*TVSCLQ Trigger: CTGCAAACAACTCACTGTGCAAGTGTTTTGGAAGCA...CCTTTGCCTGGGATGTCTTCTGCCACCCTGCAGCATCCAAATGCTATTCCGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
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| 3UTR CAA 90 bp | CCAAGTGGACTCTTAAACCCACCCCTATCTTCTTCTTTCTGCATCTaGATGTGCTATGTCATGTGCCCTAGGCACTCTCCGATGCTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: PSGLLNPPLSSSFCI*MCYVMCPRHSPMLL Trigger: TAGAAGCATCGGAGAGTGCCTAGGGCACATGACATAGCACATCAAGATGCAGAAAGAAGAAGATAGGGGTGGGTTTAAGAGTCCACTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTCGGAATAGCATTTGGATGCTGCAGGGTGGCAGAAGACATCCCAGGCAAAGGCTAGTTCTGGGTAAATaGAGAAGGATGAAACACCAT | + |
|
Preference number: 2 (lower is better) Translates to: LRNSIWMLQGGRRHPRQRLVLGK*RRMKHH Trigger: ATGGTGTTTCATCCTTCTTCATTTACCCAGAACTAG...CCTTTGCCTGGGATGTCTTCTGCCACCCTGCAGCATCCAAATGCTATTCCGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACAATTTCAGAGGCAAAGGGTGGCTTaGTTGGTTGCTTTTCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: REREREREREREREKQFQRQRVA*LVAFPW Trigger: CCAGGGAAAAGCAACCAAGCAAGCCACCCTTTGCCT...CTGAAATTGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCCGTGAGGATATCAGAATGGTGTGCCAAGGACACCATTGTCAGCGTTTTTATTGTCAAAAGCCAGGCTaGCAGGCAAAGACAATGCAA | + |
|
Preference number: 2 (lower is better) Translates to: PREDIRMVCQGHHCQRFYCQKPG*QAKTMQ Trigger: TTGCATTGTCTTTGCCTGCCAGCCTGGCTTTTGACA...ATAAAAACGCTGACAATGGTGTCCTTGGCACACCATTCTGATATCCTCACGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 90 bp | GCTAGGTTTTATTTTTCCTGGCATGGCGGGTCAGAGTTGTCTCATTaGTTGCTGACAAGAGGCAGTTCTGAAGCTCAGTGTCGTGACATT | + |
|
Preference number: 2 (lower is better) Translates to: ARFYFSWHGGSELSH*LLTRGSSEAQCRDI Trigger: AATGTCACGACACTGAGCTTCAGAACTGCCTCTTGTCAGCAACAAATGAGACAACTCTGACCCGCCATGCCAGGAAAAATAAAACCTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCCGTGAGGATATCAGAATGGTGTGCCAAGGACACCATTGTCAGCGTTTTTATAGGTGGTGGTGGATCTaGACGAGATATGATGACATA | + |
|
Preference number: 2 (lower is better) Translates to: PREDIRMVCQGHHCQRFYRWWWI*TRYDDI Trigger: TATGTCATCATATCTCGTTCAGATCCACCACCACCT...ATAAAAACGCTGACAATGGTGTCCTTGGCACACCATTCTGATATCCTCACGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR GCA 90 bp | CACCATGACCCCTGCTTTATACTTCTCATAGGAACTGAGGGAACCACGGTATTGGGCAGGCAAAGACAATaGAAGCACCATTTTTACTGG | + |
|
Preference number: 2 (lower is better) Translates to: HHDPCFILLIGTEGTTVLGRQRQ*KHHFYW Trigger: CCAGTAAAAATGGTGCTTGCATTGTCTTTGCCTGCC...CAATACCGTGGTTCCCTCAGTTCCTATGAGAAGTATAAAGCAGGGGTCATGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTAATGTCAAAAGCCAGGCTGGCAGGCAAAGACAATGCAAGCACCATTTTTACTGCCTGGGACTCAGCTaGTTTGTGCAGACAAAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SNVKSQAGRQRQCKHHFYCLGLS*FVQTKS Trigger: TGACTTTGTCTGCACAAACCAGCTGAGTCCCAGGCA...GTAAAAATGGTGCTTGCATTGTCTTTGCCTGCCAGCCTGGCTTTTGACATTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCCGTGAGGATATCAGAATGGTGTGCCAAGGACACCATTGTCAGCGTTTTTATTTGCTTTTCCCTGGGTaGACCCAGCTTATCCATTTA | + |
|
Preference number: 2 (lower is better) Translates to: PREDIRMVCQGHHCQRFYLLFPG*TQLIHL Trigger: TAAATGGATAAGCTGGGTCCACCCAGGGAAAAGCAA...ATAAAAACGCTGACAATGGTGTCCTTGGCACACCATTCTGATATCCTCACGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 90 bp | CTATGCTATGCTAGGTTTTATTTTTCCTGGCATGGCGGGTCAGAGTaGTCTCATTTGTTGCTGACAAGAGGCAGTTCTGAAGCTCAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: LCYARFYFSWHGGSE*SHLLLTRGSSEAQC Trigger: ACACTGAGCTTCAGAACTGCCTCTTGTCAGCAACAAATGAGACAACTCTGACCCGCCATGCCAGGAAAAATAAAACCTAGCATAGCATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACAATTTCAGCTAGACAGAATGGAATaGCAGAAGCACAGGAAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: REREREREREREREKQFQLDRME*QKHRKL Trigger: CAGCTTCCTGTGCTTCTGGCATTCCATTCTGTCTAG...CTGAAATTGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 90 bp | GCATTTCTCCCTGAAGATCATTTTGTGGAAGAACAGCCTGGCCAATaGTCTAAGAACCAAGAACGCCATTTTCTAAGGTGTCAAGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: AFLPEDHFVEEQPGQ*SKNQERHFLRCQVW Trigger: CCACACTTGACACCTTAGAAAATGGCGTTCTTGGTTCTTAGACAATTGGCCAGGCTGTTCTTCCACAAAATGATCTTCAGGGAGAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 90 bp | AATGGTGTGCCAAGGACACCATTGTCAGCGTTTTTATCTCTGTGGTaGCCCAGTCATTACTGTGTATTAGTAGGCTTTCTCGTTGAGACT | + |
|
Preference number: 2 (lower is better) Translates to: NGVPRTPLSAFLSLW*PSHYCVLVGFLVET Trigger: AGTCTCAACGAGAAAGCCTACTAATACACAGTAATGACTGGGCAACCACAGAGATAAAAACGCTGACAATGGTGTCCTTGGCACACCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGACACCATTGTCAGCGTTTTTATCTCTGTGGTTGCCCAGTCATTACTGTGTATTCATCGTCCTGCTATaGTATGCTAGGTTTTATTTT | + |
|
Preference number: 2 (lower is better) Translates to: RTPLSAFLSLWLPSHYCVFIVLL*YARFYF Trigger: AAAATAAAACCTAGCATAGCATAGCAGGACGATGAA...TACACAGTAATGACTGGGCAACCACAGAGATAAAAACGCTGACAATGGTGTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAATAATTAGATGCGATCTTAGAAGCTTTATTGTCTGCTTGGAGAGCATTAAGAAGATTATTTCCTCCTaGATAATGAAGCTGGTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: RIIRCDLRSFIVCLESIKKIISS*IMKLVP Trigger: GGGGACCAGCTTCATTATCCAGGAGGAAATAATCTT...CTTAATGCTCTCCAAGCAGACAATAAAGCTTCTAAGATCGCATCTAATTATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 90 bp | GTTCACAGAATGAGTGTCCTTCCTTTCGGTATTTTACTTTCATCTTaGGTAATAGAGTGGAGAATAATTAGATGCGATCTTAGAAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: VHRMSVLPFGILLSS*VIEWRIIRCDLRSF Trigger: AAAGCTTCTAAGATCGCATCTAATTATTCTCCACTCTATTACCAAAGATGAAAGTAAAATACCGAAAGGAAGGACACTCATTCTGTGAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR GCA 72 bp | CGCTACTTATTACTGTGCCTCGGGGTATCACTGTGGTaGAGGTGCCCAGGGAGCCTGTACCCAAACCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RYLLLCLGVSLW*RCPGSLYPNPW Trigger: CCAGGGGTTTGGGTACAGGCTCCCTGGGCACCTGCACCACAGTGATACCCCGAGGCACAGTAATAAGTAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CCA 72 bp | TGCTGCAGGGTGGCAGAAGACATCCCAGGCAAAGGGTaGCTTGCTTGGTTGCTTTTCCCTGGGTGGACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CCRVAEDIPGKG*LAWLLFPGWTQ Trigger: CTGGGTCCACCCAGGGAAAAGCAACCAAGCAAGCCACCCTTTGCCTGGGATGTCTTCTGCCACCCTGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CCA 72 bp | CAGCGCTACTTATTACTGTGCCTCGGGGTATCACTGTaGTGCAGGTGCCCAGGGAGCCTGTACCCAAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: QRYLLLCLGVSL*CRCPGSLYPNP Trigger: GGGGTTTGGGTACAGGCTCCCTGGGCACCTGCACCACAGTGATACCCCGAGGCACAGTAATAAGTAGCGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR CAA 90 bp | CGCTACTTATTACTGTGCCTCGGGGTATCACTGTGGTGCAGGTGCCCAGGGAGCCAAAGGGTGGCTTGCTaGGTTGCTTTTCCCTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RYLLLCLGVSLWCRCPGSQRVAC*VAFPWV Trigger: CACCCAGGGAAAAGCAACCAAGCAAGCCACCCTTTG...GCTCCCTGGGCACCTGCACCACAGTGATACCCCGAGGCACAGTAATAAGTAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR GCA 72 bp | TTATTACTGTGCCTCGGGGTATCACTGTGGTGCAGGTaGCCAGGGAGCCTGTACCCAAACCCCTGGAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: LLLCLGVSLWCR*PGSLYPNPWST Trigger: TGTGCTCCAGGGGTTTGGGTACAGGCTCCCTGGGCACCTGCACCACAGTGATACCCCGAGGCACAGTAATAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTGGCCACAGCCAGGAAAGACTCTGGCTTCCAAGGAGCACAGCACCTCTCACATGGCGGGTCAGAGTaGTCTCATTTGTTGCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: GLATARKDSGFQGAQHLSHGGSE*SHLLLT Trigger: TGTCAGCAACAAATGAGACAACTCTGACCCGCCATG...TGAGAGGTGCTGTGCTCCTTGGAAGCCAGAGTCTTTCCTGGCTGTGGCCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR GCA 72 bp | CAGGGTGGCAGAAGACATCCCAGGCAAAGGGTGGCTTaGTTGGTTGCTTTTCCCTGGGTGGACCCAGCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: QGGRRHPRQRVA*LVAFPWVDPAY Trigger: ATAAGCTGGGTCCACCCAGGGAAAAGCAACCAAGCAAGCCACCCTTTGCCTGGGATGTCTTCTGCCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR CAA 90 bp | TCGGGGTATCACTGTGGTGCAGGTGCCCAGGGAGCCTGTACCCAAACCCCTGGAGTTGTCAAAATGAATTaGGGAGGGGGTTTGTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SGYHCGAGAQGACTQTPGVVKMN*GGGLCA Trigger: TGCACACAAACCCCCTCCCAAATTCATTTTGACAAC...TCCAGGGGTTTGGGTACAGGCTCCCTGGGCACCTGCACCACAGTGATACCCCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CCA 72 bp | GTGGCAGAAGACATCCCAGGCAAAGGGTGGCTTGCTTaGTTGCTTTTCCCTGGGTGGACCCAGCTTATCCAT | + |
|
Preference number: 3 (lower is better) Translates to: VAEDIPGKGWLA*LLFPGWTQLIH Trigger: ATGGATAAGCTGGGTCCACCCAGGGAAAAGCAACCAAGCAAGCCACCCTTTGCCTGGGATGTCTTCTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR CAA 90 bp | TCGGGGTATCACTGTGGTGCAGGTGCCCAGGGAGCCTGTACCCAAACCCCTGGATCTTCTTTCTGCATCTaGATGTGCTATGTCATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SGYHCGAGAQGACTQTPGSSFCI*MCYVMC Trigger: GCACATGACATAGCACATCAAGATGCAGAAAGAAGA...TCCAGGGGTTTGGGTACAGGCTCCCTGGGCACCTGCACCACAGTGATACCCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR TCA 72 bp | GGAGCCCCTGGGACAGTAACTTTGGGCTGTCAGTCTTaGGACCTTGGTTTCGTTTCCAGCCATATCTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GAPGTVTLGCQS*DLGFVSSHISA Trigger: GGCAGAGATATGGCTGGAAACGAAACCAAGGTCTCAAGACTGACAGCCCAAAGTTACTGTCCCAGGGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR GCA 72 bp | GGGCATCAGCAGCAAAGACTGAGGGGAAAGGATCTGTaGCCAGTAATGTCAAAAGCCAGGCTGGCAGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GHQQQRLRGKDL*PVMSKARLAGK Trigger: TTTGCCTGCCAGCCTGGCTTTTGACATTACTGGGCACAGATCCTTTCCCCTCAGTCTTTGCTGCTGATGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CCA 72 bp | GGCAAAGGGTGGCTTGCTTGGTTGCTTTTCCCTGGGTaGACCCAGCTTATCCATTTAGGTTTGCCTGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: GKGWLAWLLFPG*TQLIHLGLPEP Trigger: GGGTTCAGGCAAACCTAAATGGATAAGCTGGGTCCACCCAGGGAAAAGCAACCAAGCAAGCCACCCTTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CCA 72 bp | TTCCACAGAAAGTCACATGCCAGGTTGTCAGGCATCTaGCACTCCCAAGTGACTAGGAACGAAAGGCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: FHRKSHARLSGI*HSQVTRNERPG Trigger: GCCAGGCCTTTCGTTCCTAGTCACTTGGGAGTGCCAGATGCCTGACAACCTGGCATGTGACTTTCTGTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCCTGGCCACAGCCAGGAAAGACTCTGGCTTCCAAGGAGCACAGCACCTCTAGCTTTATTGTCTGCTaGGAGAGCATTAAGGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: KAWPQPGKTLASKEHSTSSFIVC*ESIKEA Trigger: GGCTTCCTTAATGCTCTCCAAGCAGACAATAAAGCT...AGAGGTGCTGTGCTCCTTGGAAGCCAGAGTCTTTCCTGGCTGTGGCCAGGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGGAGTGCCCTCCCCATCCCCCTTCCACAGAAAGTCACATGCCAGGTTGTCGTTTGGAGGCTGTGGTaGATGGTAGCTAGGGAATTG | + |
|
Preference number: 3 (lower is better) Translates to: FRSALPIPLPQKVTCQVVVWRLW*MVAREL Trigger: CAATTCCCTAGCTACCATCAACCACAGCCTCCAAAC...GACAACCTGGCATGTGACTTTCTGTGGAAGGGGGATGGGGAGGGCACTCCTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTCAATGGGCCTTTGTCAATGGAGTCACTTGTGGTTGGCTATGGAGAACTAGGGTGGCTTGCTTGGTaGCTTTTCCCTGGGTGGACC | + |
|
Preference number: 3 (lower is better) Translates to: GFNGPLSMESLVVGYGELGWLAW*LFPGWT Trigger: GGTCCACCCAGGGAAAAGCAACCAAGCAAGCCACCC...TAGTTCTCCATAGCCAACCACAAGTGACTCCATTGACAAAGGCCCATTGAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR TCA 72 bp | CCTGGCATGGCGGGTCAGAGTTGTCTCATTTGTTGCTaGCAAGAGGCAGTTCTGAAGCTCAGTGTCGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: PGMAGQSCLICC*QEAVLKLSVVT Trigger: TGTCACGACACTGAGCTTCAGAACTGCCTCTTGTCAGCAACAAATGAGACAACTCTGACCCGCCATGCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR TCA 72 bp | ATTAGATACAGACTCGGGGATGGGAGAGCCCAGATGTaGGGAACAGTCTCCTCATCTCACAGCTGGTTCACG | + |
|
Preference number: 3 (lower is better) Translates to: IRYRLGDGRAQM*GTVSSSHSWFT Trigger: CGTGAACCAGCTGTGAGATGAGGAGACTGTTCCTCACATCTGGGCTCTCCCATCCCCGAGTCTGTATCTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CCA 72 bp | GACTCTGGCTTCCAAGGAGCACAGCACCTCTCACTCTaGGTTCAATGGGCCTTTGTCAATGGAGTCACTTGT | + |
|
Preference number: 3 (lower is better) Translates to: DSGFQGAQHLSL*VQWAFVNGVTC Trigger: ACAAGTGACTCCATTGACAAAGGCCCATTGAACCCAGAGTGAGAGGTGCTGTGCTCCTTGGAAGCCAGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTGGCCACAGCCAGGAAAGACTCTGGCTTCCAAGGAGCACAGCACCTCTCAATCTTAGAAGCTTTATaGTCTGCTTGGAGAGCATTA | + |
|
Preference number: 3 (lower is better) Translates to: GLATARKDSGFQGAQHLSILEAL*SAWRAL Trigger: TAATGCTCTCCAAGCAGACAATAAAGCTTCTAAGAT...TGAGAGGTGCTGTGCTCCTTGGAAGCCAGAGTCTTTCCTGGCTGTGGCCAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR TCA 72 bp | CAGAACCTTCCATCTGGTGATCTCTCCAGTGAGCCTTaGAGACAGCGCTACTTATTACTGTGCCTCGGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: QNLPSGDLSSEP*RQRYLLLCLGV Trigger: TACCCCGAGGCACAGTAATAAGTAGCGCTGTCTTCAAGGCTCACTGGAGAGATCACCAGATGGAAGGTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CCA 72 bp | ACAATTTCAGGGATGCAGAGGACCACTGAGAGGGAGTaGGAATGTGAGAGTAATGGAGGTGGTGGTGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: TISGMQRTTERE*ECESNGGGGGS Trigger: AGATCCACCACCACCTCCATTACTCTCACATTCCCACTCCCTCTCAGTGGTCCTCTGCATCCCTGAAATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CCA 72 bp | GCACCTCTCACTCTGGGTTCAATGGGCCTTTGTCAATaGAGTCACTTGTGGTTGGCTATGGAGAACTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: APLTLGSMGLCQ*SHLWLAMENYS Trigger: GCTGTAGTTCTCCATAGCCAACCACAAGTGACTCCATTGACAAAGGCCCATTGAACCCAGAGTGAGAGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR GCA 72 bp | CCGGGCACAGGTATTAATTCTGTACTCTCTGCATTGTaGCTGGGACTCAGCTGGTTTGTGCAGACAAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PGTGINSVLSAL*LGLSWFVQTKS Trigger: TGACTTTGTCTGCACAAACCAGCTGAGTCCCAGGCACAATGCAGAGAGTACAGAATTAATACCTGTGCCCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR GCA 72 bp | ATCTTTTCTAACACCTTCGGAATAGCATTTGGATGCTaGAGGGTGGCAGAAGACATCCCAGGCAAAGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: IFSNTFGIAFGC*RVAEDIPGKGW Trigger: CCACCCTTTGCCTGGGATGTCTTCTGCCACCCTGCAGCATCCAAATGCTATTCCGAAGGTGTTAGAAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR GCA 72 bp | GCAATCTTTTCTAACACCTTCGGAATAGCATTTGGATaGTGCAGGGTGGCAGAAGACATCCCAGGCAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: AIFSNTFGIAFG*CRVAEDIPGKG Trigger: CCCTTTGCCTGGGATGTCTTCTGCCACCCTGCAGCATCCAAATGCTATTCCGAAGGTGTTAGAAAAGATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CCA 72 bp | TGGGACAGTAACTTTGGGCTGTCAGTCTTGAGACCTTaGTTTCGTTTCCAGCCATATCTCTGCCTCACCGAA | + |
|
Preference number: 3 (lower is better) Translates to: WDSNFGLSVLRP*FRFQPYLCLTE Trigger: TTCGGTGAGGCAGAGATATGGCTGGAAACGAAACCAAGGTCTCAAGACTGACAGCCCAAAGTTACTGTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTGAGAGTAATGGAGGTGGTGGTGGATCTGAACGAGATATGATGACATACCAGATCCCATCCCTTGGTTaGGAGGCTGTGGTTGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: CESNGGGGGSERDMMTYQIPSLG*EAVVDG Trigger: ACCATCAACCACAGCCTCCAAACCAAGGGATGGGAT...CTGGTATGTCATCATATCTCGTTCAGATCCACCACCACCTCCATTACTCTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCGTGAGGATATCAGAATGGTGTGCCAAGGACACCATTGTCAGCGTTTTTATAATTTGGGAGGGGGTTaGTGTGCACTTCAGACACAG | + |
|
Preference number: 3 (lower is better) Translates to: PREDIRMVCQGHHCQRFYNLGGG*CALQTQ Trigger: CTGTGTCTGAAGTGCACACAAACCCCCTCCCAAATT...ATAAAAACGCTGACAATGGTGTCCTTGGCACACCATTCTGATATCCTCACGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR TCA 72 bp | CACATCCCTACTCCTGCTTCCAAAACACTTGCACAGTaGGTTGTTTGCAGGCCGGGCACAGGTATTAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: HIPTPASKTLAQ*VVCRPGTGINS Trigger: AGAATTAATACCTGTGCCCGGCCTGCAAACAACTCACTGTGCAAGTGTTTTGGAAGCAGGAGTAGGGATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR TCA 72 bp | GGAGTCACTTGTGGTTGGCTATGGAGAACTACAGCTTaGGGAACTACCATATCTCAAGTCCATGCTGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GVTCGWLWRTTA*GTTISQVHAVP Trigger: GGGAACAGCATGGACTTGAGATATGGTAGTTCCTCAAGCTGTAGTTCTCCATAGCCAACCACAAGTGACTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR GCA 72 bp | GTCCATGCTGTTCCCCGTGAGGATATCAGAATGGTGTaGCAAGGACACCATTGTCAGCGTTTTTATCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VHAVPREDIRMV*QGHHCQRFYLC Trigger: ACAGAGATAAAAACGCTGACAATGGTGTCCTTGGCACACCATTCTGATATCCTCACGGGGAACAGCATGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CCA 72 bp | CACACAGCATCATCCCATCCCTTGGTTTGGAGGCTGTaGTTGATGGTAGCTAGGGAATTGGCAGTGATAATT | + |
|
Preference number: 3 (lower is better) Translates to: HTASSHPLVWRL*LMVARELAVII Trigger: AATTATCACTGCCAATTCCCTAGCTACCATCAACCACAGCCTCCAAACCAAGGGATGGGATGATGCTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CCA 72 bp | ACACATCATTCTCATTTTGGTGATACAGGGAGCCCCTaGGACAGTAACTTTGGGCTGTCAGTCTTGAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: THHSHFGDTGSP*DSNFGLSVLRP Trigger: AGGTCTCAAGACTGACAGCCCAAAGTTACTGTCCCAGGGGCTCCCTGTATCACCAAAATGAGAATGATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CCA 72 bp | CTCAAGTCCATGCTGTTCCCCGTGAGGATATCAGAATaGTGTGCCAAGGACACCATTGTCAGCGTTTTTATC | + |
|
Preference number: 3 (lower is better) Translates to: LKSMLFPVRISE*CAKDTIVSVFI Trigger: GATAAAAACGCTGACAATGGTGTCCTTGGCACACCATTCTGATATCCTCACGGGGAACAGCATGGACTTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CCA 72 bp | CTGGGTTCAATGGGCCTTTGTCAATGGAGTCACTTGTaGTTGGCTATGGAGAACTACAGCTTGAGGAACTAC | + |
|
Preference number: 3 (lower is better) Translates to: LGSMGLCQWSHL*LAMENYSLRNY Trigger: GTAGTTCCTCAAGCTGTAGTTCTCCATAGCCAACCACAAGTGACTCCATTGACAAAGGCCCATTGAACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCATGACCCCTGCTTTATACTTCTCATAGGAACTGAGGGAACCACGGTATTGCTGGCTAGGGATGAGTaGAGTACAGCTTTCCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: HHDPCFILLIGTEGTTVLLARDE*STAFHV Trigger: AACATGGAAAGCTGTACTCAACTCATCCCTAGCCAG...CAATACCGTGGTTCCCTCAGTTCCTATGAGAAGTATAAAGCAGGGGTCATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTCAAGTGTGGAGTTCAATGGTGTCCTAAGAGAAAACCATTTTCTCTTGAATCTGTACTCTCTGCATaGTGCCTGGGACTCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GVKCGVQWCPKRKPFSLESVLSA*CLGLSW Trigger: CCAGCTGAGTCCCAGGCACAATGCAGAGAGTACAGA...TTCAAGAGAAAATGGTTTTCTCTTAGGACACCATTGAACTCCACACTTGACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTCAATGGGCCTTTGTCAATGGAGTCACTTGTGGTTGGCTATGGAGAACTACTGCTTCCAAAACACTaGCACAGTGAGTTGTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GFNGPLSMESLVVGYGELLLPKH*HSELFA Trigger: TGCAAACAACTCACTGTGCAAGTGTTTTGGAAGCAG...TAGTTCTCCATAGCCAACCACAAGTGACTCCATTGACAAAGGCCCATTGAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR TCA 72 bp | TCTGAGCATCATTCTCCCCTGGTAGTCACTTCACACTaGGTGAAGCCAGAGGTGAACGGCTTAATAAATGCA | + |
|
Preference number: 3 (lower is better) Translates to: SEHHSPLVVTSH*VKPEVNGLINA Trigger: TGCATTTATTAAGCCGTTCACCTCTGGCTTCACTCAGTGTGAAGTGACTACCAGGGGAGAATGATGCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR TCA 72 bp | GCCCAGTCATTACTGTGTATTAGTAGGCTTTCTCGTTaGGACTCCAAGTGGACTCTTAAACCCACCCCTATC | + |
|
Preference number: 3 (lower is better) Translates to: AQSLLCISRLSR*DSKWTLKPTPI Trigger: GATAGGGGTGGGTTTAAGAGTCCACTTGGAGTCTCAACGAGAAAGCCTACTAATACACAGTAATGACTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR TCA 72 bp | CCCATGATGCAGATTTTGTTCAAGGTCGATTTTCTGTaGAGCACAGCAAGGCCAACAGAACCTTCCATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PMMQILFKVDFL*STARPTEPSIW Trigger: CCAGATGGAAGGTTCTGTTGGCCTTGCTGTGCTTCACAGAAAATCGACCTTGAACAAAATCTGCATCATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR GCA 72 bp | TCATCTCACAGCTGGTTCACGACAGCTAGGAATGCATaGTGTATTTCTAGCACTTGTTGCAGCTACGTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SSHSWFTTARNA*CISSTCCSYVL Trigger: TAGCACGTAGCTGCAACAAGTGCTAGAAATACAGCATGCATTCCTAGCTGTCGTGAACCAGCTGTGAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR GCA 72 bp | AGTGGACTCTTAAACCCACCCCTATCTTCTTCTTTCTaGATCTTGATGTGCTATGTCATGTGCCCTAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SGLLNPPLSSSF*ILMCYVMCPRH Trigger: GTGCCTAGGGCACATGACATAGCACATCAAGATGCAGAAAGAAGAAGATAGGGGTGGGTTTAAGAGTCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CCA 72 bp | AATTCTGTACTCTCTGCATTGTGCCTGGGACTCAGCTaGTTTGTGCAGACAAAGTCAGTTCACAGAATGAGT | + |
|
Preference number: 3 (lower is better) Translates to: NSVLSALCLGLS*FVQTKSVHRMS Trigger: ACTCATTCTGTGAACTGACTTTGTCTGCACAAACCAGCTGAGTCCCAGGCACAATGCAGAGAGTACAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CCA 72 bp | ATCGTCCTGCTATGCTATGCTAGGTTTTATTTTTCCTaGCATGGCGGGTCAGAGTTGTCTCATTTGTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: IVLLCYARFYFS*HGGSELSHLLL Trigger: CAGCAACAAATGAGACAACTCTGACCCGCCATGCCAGGAAAAATAAAACCTAGCATAGCATAGCAGGACGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CCA 72 bp | GTGCCAAGGACACCATTGTCAGCGTTTTTATCTCTGTaGTTGCCCAGTCATTACTGTGTATTAGTAGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VPRTPLSAFLSL*LPSHYCVLVGF Trigger: AAAGCCTACTAATACACAGTAATGACTGGGCAACCACAGAGATAAAAACGCTGACAATGGTGTCCTTGGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR TCA 72 bp | TCAGCTGGTTTGTGCAGACAAAGTCAGTTCACAGAATaGGTGTCCTTCCTTTCGGTATTTTACTTTCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: SAGLCRQSQFTE*VSFLSVFYFHL Trigger: AAGATGAAAGTAAAATACCGAAAGGAAGGACACTCATTCTGTGAACTGACTTTGTCTGCACAAACCAGCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR GCA 72 bp | CTTTCATCTTTGGTAATAGAGTGGAGAATAATTAGATaGGATCTTAGAAGCTTTATTGTCTGCTTGGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LSSLVIEWRIIR*DLRSFIVCLES Trigger: GCTCTCCAAGCAGACAATAAAGCTTCTAAGATCGCATCTAATTATTCTCCACTCTATTACCAAAGATGAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 72 bp | GCAGGGTGGCAGAAGACATCCCAGGCAAAGGGTGGCTaGCTTGGTTGCTTTTCCCTGGGTGGACCCAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AGWQKTSQAKGG*LGCFSLGGPSL Trigger: TAAGCTGGGTCCACCCAGGGAAAAGCAACCAAGCAAGCCACCCTTTGCCTGGGATGTCTTCTGCCACCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 72 bp | GGGCGGGTCACATCCCTACTCCTGCTTCCAAAACACTaGCACAGTGAGTTGTTTGCAGGCCGGGCACAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRVTSLLLLPKH*HSELFAGRAQV Trigger: TACCTGTGCCCGGCCTGCAAACAACTCACTGTGCAAGTGTTTTGGAAGCAGGAGTAGGGATGTGACCCGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 72 bp | GGTGGCAGAAGACATCCCAGGCAAAGGGTGGCTTGCTaGGTTGCTTTTCCCTGGGTGGACCCAGCTTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGRRHPRQRVAC*VAFPWVDPAYP Trigger: TGGATAAGCTGGGTCCACCCAGGGAAAAGCAACCAAGCAAGCCACCCTTTGCCTGGGATGTCTTCTGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| CDS-3UTR TCA 90 bp | TTTAGGAGTGCCCTCCCCATCCCCCTTCCACAGAAAGTCACATGCCAGGTTGTCGTAGGCCCAGCACCGTaGGGGACATCATGTTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: FRSALPIPLPQKVTCQVVVGPAP*GTSCLP Trigger: AGGTAAACATGATGTCCCTCACGGTGCTGGGCCTAC...GACAACCTGGCATGTGACTTTCTGTGGAAGGGGGATGGGGAGGGCACTCCTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 72 bp | GGGAGCCCCTGGGACAGTAACTTTGGGCTGTCAGTCTaGAGACCTTGGTTTCGTTTCCAGCCATATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSPWDSNFGLSV*RPWFRFQPYLC Trigger: GCAGAGATATGGCTGGAAACGAAACCAAGGTCTCAAGACTGACAGCCCAAAGTTACTGTCCCAGGGGCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 72 bp | GCAGAAGACATCCCAGGCAAAGGGTGGCTTGCTTGGTaGCTTTTCCCTGGGTGGACCCAGCTTATCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: AEDIPGKGWLAW*LFPGWTQLIHL Trigger: TAAATGGATAAGCTGGGTCCACCCAGGGAAAAGCAACCAAGCAAGCCACCCTTTGCCTGGGATGTCTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| CDS-3UTR CCA 90 bp | GAATGGAATGCCAGAAGCACAGGAAGCTGTGATGTGACTGACACGCTCAGCCTGCATGATGAAAACAGATaGTTTGGCCGGAGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EWNARSTGSCDVTDTLSLHDENR*FGRRLA Trigger: AGCCAGCCTCCGGCCAAACCATCTGTTTTCATCATG...CAGGCTGAGCGTGTCAGTCACATCACAGCTTCCTGTGCTTCTGGCATTCCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 72 bp | AGGCCGGGCACAGGTATTAATTCTGTACTCTCTGCATaGTGCCTGGGACTCAGCTGGTTTGTGCAGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPGTGINSVLSA*CLGLSWFVQTK Trigger: CTTTGTCTGCACAAACCAGCTGAGTCCCAGGCACAATGCAGAGAGTACAGAATTAATACCTGTGCCCGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 72 bp | CTTTTCCCTGGGTGGACCCAGCTTATCCATTTAGGTTaGCCTGAACCCAGTGACACACAGCATCATCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LFPGWTQLIHLG*PEPSDTQHHPI Trigger: GATGGGATGATGCTGTGTGTCACTGGGTTCAGGCAAACCTAAATGGATAAGCTGGGTCCACCCAGGGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 72 bp | TTTTCCTGGCATGGCGGGTCAGAGTTGTCTCATTTGTaGCTGACAAGAGGCAGTTCTGAAGCTCAGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: FSWHGGSELSHL*LTRGSSEAQCR Trigger: ACGACACTGAGCTTCAGAACTGCCTCTTGTCAGCAACAAATGAGACAACTCTGACCCGCCATGCCAGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGCTTTCTCGTTGAGACTCCAAGTGGACTCTTAAACCCACCCCTATCTTCTTCTCAGTGTGAACTGTaGCTCTTGGGCCATAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGFLVETPSGLLNPPLSSSQCEL*LLGHSK Trigger: CTTGCTATGGCCCAAGAGTCACAGTTCACACTGAGA...AGAAGATAGGGGTGGGTTTAAGAGTCCACTTGGAGTCTCAACGAGAAAGCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGGATCTGTGCCCAGTAATGTCAAAAGCCAGGCTGGCAGGCAAAGACAATCAAAGTCAGTCGAGTaGACAGTTTCACTGTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKGSVPSNVKSQAGRQRQSKSVE*TVSLLC Trigger: GCACAACAGTGAAACTGTGCACTCGACTGACTTTGA...TTGTCTTTGCCTGCCAGCCTGGCTTTTGACATTACTGGGCACAGATCCTTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 72 bp | TCCCTACTCCTGCTTCCAAAACACTTGCACAGTGAGTaGTTTGCAGGCCGGGCACAGGTATTAATTCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLLLPKHLHSE*FAGRAQVLILY Trigger: GTACAGAATTAATACCTGTGCCCGGCCTGCAAACAACTCACTGTGCAAGTGTTTTGGAAGCAGGAGTAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 72 bp | ACTCTGGGTTCAATGGGCCTTTGTCAATGGAGTCACTaGTGGTTGGCTATGGAGAACTACAGCTTGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLGSMGLCQWSH*WLAMENYSLRN Trigger: GTTCCTCAAGCTGTAGTTCTCCATAGCCAACCACAAGTGACTCCATTGACAAAGGCCCATTGAACCCAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 72 bp | TATTTTTCCTGGCATGGCGGGTCAGAGTTGTCTCATTaGTTGCTGACAAGAGGCAGTTCTGAAGCTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YFSWHGGSELSH*LLTRGSSEAQC Trigger: ACACTGAGCTTCAGAACTGCCTCTTGTCAGCAACAAATGAGACAACTCTGACCCGCCATGCCAGGAAAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| CDS-3UTR TCA 90 bp | CAGCTTATCCATTTAGGTTTGCCTGAACCCAGTGACACACAGCATCATCCCATCGTTTCACTGTTGTGCTaGACTGAACATGTCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QLIHLGLPEPSDTQHHPIVSLLC*TEHVTE Trigger: TTCAGTGACATGTTCAGTTCAGCACAACAGTGAAAC...GATGGGATGATGCTGTGTGTCACTGGGTTCAGGCAAACCTAAATGGATAAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| CDS-3UTR TCA 90 bp | GGGTTCAATGGGCCTTTGTCAATGGAGTCACTTGTGGTTGGCTATGGAGAACTAGCCATAGCAAGGCTCTaGAATTTGTGTGTCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GFNGPLSMESLVVGYGELAIARL*NLCVIF Trigger: GAAAATGACACACAAATTTCAGAGCCTTGCTATGGC...TAGTTCTCCATAGCCAACCACAAGTGACTCCATTGACAAAGGCCCATTGAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 72 bp | GCTAGGTTTTATTTTTCCTGGCATGGCGGGTCAGAGTaGTCTCATTTGTTGCTGACAAGAGGCAGTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ARFYFSWHGGSE*SHLLLTRGSSE Trigger: TTCAGAACTGCCTCTTGTCAGCAACAAATGAGACAACTCTGACCCGCCATGCCAGGAAAAATAAAACCTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| CDS-3UTR CCA 90 bp | CTACCATATCTCAAGTCCATGCTGTTCCCCGTGAGGATATCAGAATGGTGTGCCGAAAGAATTTGCATATaGTTCAAAGTCAGTCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPYLKSMLFPVRISEWCAERICI*FKVSRV Trigger: CACTCGACTGACTTTGAACCATATGCAAATTCTTTC...GGCACACCATTCTGATATCCTCACGGGGAACAGCATGGACTTGAGATATGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 72 bp | TTGGTTTGGAGGCTGTGGTTGATGGTAGCTAGGGAATaGGCAGTGATAATTGCTCTTTCAAACATCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LVWRLWLMVARE*AVIIALSNITP Trigger: TGGTGTGATGTTTGAAAGAGCAATTATCACTGCCAATTCCCTAGCTACCATCAACCACAGCCTCCAAACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| CDS-3UTR TCA 90 bp | AGTAATGTCAAAAGCCAGGCTGGCAGGCAAAGACAATGCAAGCACCATTTTTACCAGTCAAGAGAAAATTaGTGGCAATGGTCTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SNVKSQAGRQRQCKHHFYQSREN*WQWSWQ Trigger: TTGCCAAGACCATTGCCATCAATTTTCTCTTGACTG...GTAAAAATGGTGCTTGCATTGTCTTTGCCTGCCAGCCTGGCTTTTGACATTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| CDS-3UTR TCA 90 bp | AGAATAATTAGATGCGATCTTAGAAGCTTTATTGTCTGCTTGGAGAGCATTAAGTTCGAATCTCCATACTaGCCAAGCTTGACAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RIIRCDLRSFIVCLESIKFESPY*PSLTAL Trigger: CAGTGCTGTCAAGCTTGGTCAGTATGGAGATTCGAA...CTTAATGCTCTCCAAGCAGACAATAAAGCTTCTAAGATCGCATCTAATTATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 72 bp | ATTTTATTTGGACAGCATTTCTCCCTGAAGATCATTTaGTGGAAGAACAGCCTGGCCAATTGTCTAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: ILFGQHFSLKII*WKNSLANCLRT Trigger: GGTTCTTAGACAATTGGCCAGGCTGTTCTTCCACAAAATGATCTTCAGGGAGAAATGCTGTCCAAATAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 72 bp | ATAATTAGATGCGATCTTAGAAGCTTTATTGTCTGCTaGGAGAGCATTAAGGAAGCCAAGTGTGAGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IIRCDLRSFIVC*ESIKEAKCEFV Trigger: AACAAACTCACACTTGGCTTCCTTAATGCTCTCCAAGCAGACAATAAAGCTTCTAAGATCGCATCTAATTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| 3UTR CAA 72 bp | ATGAGTGTCCTTCCTTTCGGTATTTTACTTTCATCTTaGGTAATAGAGTGGAGAATAATTAGATGCGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: MSVLPFGILLSS*VIEWRIIRCDL Trigger: AAGATCGCATCTAATTATTCTCCACTCTATTACCAAAGATGAAAGTAAAATACCGAAAGGAAGGACACTCAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| CDS TCA 90 bp | GGGGGAGATGACTATAGCAGGGTCGAATTCCACAATCTTCTTGGATaGTCTGAGACTTATAGTCACCTCTTTAGGGTAGAAATCTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GGDDYSRVEFHNLLG*SETYSHLFRVEIFH Trigger: GTGAAAGATTTCTACCCTAAAGAGGTGACTATAAGTCTCAGATCATCCAAGAAGATTGTGGAATTCGACCCTGCTATAGTCATCTCCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| CDS TCA 72 bp | TGGTCTTGGCAAACAGCAGTCGTAGGCCCAGCACCGTaGGGGACATCATGTTTACCTTCTCAGTGTGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: WSWQTAVVGPAP*GTSCLPSQCEL Trigger: CAGTTCACACTGAGAAGGTAAACATGATGTCCCTCACGGTGCTGGGCCTACGACTGCTGTTTGCCAAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||
| CDS TCA 72 bp | TCAAAGTCAGTCGAGTGCACAGTTTCACTGTTGTGCTaGACTGAACATGTCACTGAATTCGAATCTCCATAC | + |
|
Preference number: 6 (lower is better) Translates to: SKSVECTVSLLC*TEHVTEFESPY Trigger: GTATGGAGATTCGAATTCAGTGACATGTTCAGTTCAGCACAACAGTGAAACTGTGCACTCGACTGACTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196323.2 |
||