Pregenerated sensors for TRCG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070298Ensembl transcript IDs: ENSMUST00000093837.5
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGGCATGGCCCCGCCCCTaGGGCCTCTCGAGGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVAWPRP*GLSRLW Trigger: CCAGAGCCTCGAGAGGCCCCAGGGGCGGGGCCATGC...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR GCA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGTGTAGAGAGGCCTCCTaGCCTCCTCCCCAGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: MRQGSGVKQGLEESTIGECREAS*PPPQGL Trigger: GAGGCCCTGGGGAGGAGGGCAGGAGGCCTCTCTACA...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGGAGGGGCGAGGGGAGTaGAGGGAGGATGCCTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVEGRGE*REDACE Trigger: TTCACAGGCATCCTCCCTCCACTCCCCTCGCCCCTC...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGTCGAGGCTCTGGAGCTaGGGGTGCCAAGGACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVSRLWS*GCQGLG Trigger: TCCCAGTCCTTGGCACCCCCAGCTCCAGAGCCTCGA...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR TCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGCCAGAGGACACTGGCTaGGAGGCCATGTCGGATGCA | + |
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Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVPEDTG*EAMSDA Trigger: TGCATCCGACATGGCCTCTCAGCCAGTGTCCTCTGG...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR TCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGGGTGAGGTCCAGCCCTaGTCTTCCAGGAGATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVGEVQP*SSRRCR Trigger: CCTGCATCTCCTGGAAGATCAGGGCTGGACCTCACC...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR TCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGGCACGGTGTCTTGAATaGTGGCCTGGGCTGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVARCLE*WPGLAQ Trigger: CTGTGCCAGCCCAGGCCATCATTCAAGACACCGTGC...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR GCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGAGACCCTCAGTTTCCTaGAGGGAGCCCAGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVRPSVS*REPRAW Trigger: CCAAGCCCTGGGCTCCCTGCAGGAAACTGAGGGTCT...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR TCA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGGACAAAGCTGCAGGTaGTGGGGATGCAGACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MRQGSGVKQGLEESTIGEGQSCR*WGCRQG Trigger: CCCCTGTCTGCATCCCCATCACCTGCAGCTTTGTCC...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGCCTCTGGCCTGGAGTaGCCATCCCTCCATGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FMRQGSGVKQGLEESTIGASGLE*PSLHAG Trigger: GCCTGCATGGAGGGATGGCCACTCCAGGCCAGAGGC...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGCTAGGCAGAAGCAGCTaGGGCAGGAAGGGCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: MRQGSGVKQGLEESTIGELGRSS*GRKGLM Trigger: CATGAGGCCCTTCCTGCCCCAGCTGCTTCTGCCTAG...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGAATGATGGCCTGGGCTaGCACAGCCCCAAAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVNDGLG*HSPKEG Trigger: GCCTTCTTTGGGGCTGTGCCAGCCCAGGCCATCATT...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR TCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGATTGAGGGAGACTCCTaGCCCCCAGCTCCTTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVIEGDS*PPAPSV Trigger: TACAGAAGGAGCTGGGGGTCAGGAGTCTCCCTCAAT...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR TCA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTATATCCTGGCCAGGGTaGGGGAGGGTAGAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FMRQGSGVKQGLEESTIGISWPG*GRVEAR Trigger: CCTGGCCTCTACCCTCCCTCACCCTGGCCAGGATAT...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR TCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGTCTCCAAGGTCTTGGTaGAGGGGTGACCCAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVSPRSW*RGDPGS Trigger: TGATCCTGGGTCACCCCTTCACCAAGACCTTGGAGA...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGCTCTGGAGCCCACTTaGGAGGTGAGGTCCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FMRQGSGVKQGLEESTIGALEPT*EVRSSP Trigger: AGGGCTGGACCTCACCTCCCAAGTGGGCTCCAGAGC...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGTCAGAGGAAAGGCCATaGTCGGCCAGGGACAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MRQGSGVKQGLEESTIGESEERP*SARDRY Trigger: GTACCTGTCCCTGGCCGACCATGGCCTTTCCTCTGA...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGATGGGCCAGGTGACTaGCCAGGCCTTGGAGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: FMRQGSGVKQGLEESTIGDGPGD*PGLGDG Trigger: TCCGTCTCCAAGGCCTGGCCAGTCACCTGGCCCATC...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR TCA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTAGCCCACTTGGGAGGTaGGGTCCAGCCCTGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FMRQGSGVKQGLEESTIGSPLGR*GPALIF Trigger: GAAGATCAGGGCTGGACCTCACCTCCCAAGTGGGCT...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR GCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGGGATGCCCAGTAGAATaGGGCTACTTTGCTGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVGCPVE*GYFAEL Trigger: CAGCTCAGCAAAGTAGCCGCATTCTACTGGGCATCC...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR GCA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGGCCATCCCTCCATaGAGGCACTGGTATGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: MRQGSGVKQGLEESTIGEVAIPP*RHWYVD Trigger: GTCTACATACCAGTGCCTGCATGGAGGGATGGCCAC...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR GCA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGAAGCCAGAGCTATGTaGGGTAGAGGGAGGGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: MRQGSGVKQGLEESTIGEEARAM*GRGRAR Trigger: TCTAGCCCTCCCTCTACCGCACATAGCTCTGGCTTC...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGTGTCGGATGCAGATGTaGTCAGGGCTGAGGGAATTG | + |
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Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVCRMQM*SGLREL Trigger: CAATTCCCTCAGCCCTGACCACATCTGCATCCGACA...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGAGCGTGGGCATGTaGATTGGGCTGGTGGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: FMRQGSGVKQGLEESTIGESVGM*IGLVGS Trigger: GCTTCCCACCAGCCCAATCCACATGCCCACGCTCTC...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGTTGGAGGGAGAGCGTaGGCATGTGGATTGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FMRQGSGVKQGLEESTIGVGGRA*ACGLGW Trigger: CCAGCCCAATCCACATGCCCACGCTCTCCCTCCAAC...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGTACCCTGGCAGTCAGTaGTTCCTGGTGGAATTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVYPGSQ*FLVEFL Trigger: GAGGAATTCCACCAGGAACCACTGACTGCCAGGGTA...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR TCA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTACTCCTTCACGTTGCTaGATAGGAGCAGGGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: FMRQGSGVKQGLEESTIGTPSRC*IGAGAG Trigger: GCCAGCCCCTGCTCCTATTCAGCAACGTGAAGGAGT...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR GCA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGTTTGCTGAGCTGATGTaGCAGGGGCTGAGGGAAACT | + |
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Preference number: 4 (lower is better) Translates to: MRQGSGVKQGLEESTIGEFAELM*QGLRET Trigger: AGTTTCCCTCAGCCCCTGGCACATCAGCTCAGCAAA...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGGCTCAGATTCATGTCTaGGAGAAGGCTGTGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVAQIHV*EKAVVM Trigger: CATCACCACAGCCTTCTCCCAGACATGAATCTGAGC...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGGACTACGTCCTCCAGTaGAGAAACTCAAGTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVDYVLQ*RNSSPA Trigger: TGCAGGACTTGAGTTTCTCCACTGGAGGACGTAGTC...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTCAGTGGTTCCTGGTaGAATTCCTCCACCACCACT | + |
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Preference number: 4 (lower is better) Translates to: MRQGSGVKQGLEESTIGEVSGSW*NSSTTT Trigger: AGTGGTGGTGGAGGAATTCCACCAGGAACCACTGAC...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR TCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGGAAAGAGTCTGTAGTTaGGGGTGCAATGACAGACAC | + |
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Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVERVCS*GCNDRH Trigger: GTGTCTGTCATTGCACCCTCAACTACAGACTCTTTC...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR TCA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGAGCAGGATACAAGACTaGGAACTAGGCAGAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: MRQGSGVKQGLEESTIGESRIQD*ELGRSS Trigger: GCTGCTTCTGCCTAGTTCTCAGTCTTGTATCCTGCT...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGGGCTAGAGAAATGTTaGAGGGAGAGCGTGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: FMRQGSGVKQGLEESTIGGLEKC*RESVGM Trigger: CATGCCCACGCTCTCCCTCCAACATTTCTCTAGCCC...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTTCGTGGGTGACCAGCTaGATGGTCTGCTTTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FMRQGSGVKQGLEESTIGSWVTS*MVCFSS Trigger: GCTGGAAAAGCAGACCATCCAGCTGGTCACCCACGA...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGCAGTCAGTGGTTCCTaGTGGAATTCCTCCACCACC | + |
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Preference number: 4 (lower is better) Translates to: FMRQGSGVKQGLEESTIGAVSGS*WNSSTT Trigger: GGTGGTGGAGGAATTCCACCAGGAACCACTGACTGC...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR GCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGGAGAAACTCAAGTCCTaGAAAGACATATCCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVEKLKS*KDISWP Trigger: TGGCCAGGATATGTCTTTGCAGGACTTGAGTTTCTC...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR GCA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGTGGAGGACTTCACTTTaGGGTACAAAGTCCAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: MRQGSGVKQGLEESTIGEWRTSL*GTKSRG Trigger: TCCTCTGGACTTTGTACCGCAAAGTGAAGTCCTCCA...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR GCA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGACCAGCTGGATGGTCTaGTTTTCCAGCAGGATACAA | + |
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Preference number: 4 (lower is better) Translates to: MRQGSGVKQGLEESTIGETSWMV*FSSRIQ Trigger: TTGTATCCTGCTGGAAAAGCAGACCATCCAGCTGGT...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGCTGCTTTCTCCCCATTaGCCATTATGCTGGATTTCT | + |
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Preference number: 4 (lower is better) Translates to: RQGSGVKQGLEESTIGEVLLSPH*PLCWIS Trigger: AGAAATCCAGCATAATGGCCAATGGGGAGAAAGCAG...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR TCA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTAGATGTGGTCAGGGCTaGGGGAATTGGTTCAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: FMRQGSGVKQGLEESTIGRCGQG*GNWFRY Trigger: ATACCTGAACCAATTCCCTCAGCCCTGACCACATCT...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGCATTGGCCATTATGCTaGATTTCTGAAGGGTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: MRQGSGVKQGLEESTIGEHWPLC*ISEGWD Trigger: ATCCCACCCTTCAGAAATCCAGCATAATGGCCAATG...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR TCA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGTGGGGATGGGGCTCTTaGATTTGTATTCCATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: MRQGSGVKQGLEESTIGEWGWGS*ICIPCK Trigger: TTTACATGGAATACAAATTCAAGAGCCCCATCCCCA...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR CCA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTCCTCCATGCAGGCACTaGTATGTAGACAGTGGAATT | + |
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Preference number: 4 (lower is better) Translates to: FMRQGSGVKQGLEESTIGPPCRH*YVDSGI Trigger: AATTCCACTGTCTACATACCAGTGCCTGCATGGAGG...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR TCA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGATTATGCTGGATTTCTaGAGGGTGGGATCTGTTATA | + |
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Preference number: 4 (lower is better) Translates to: MRQGSGVKQGLEESTIGEIMLDF*RVGSVI Trigger: TATAACAGATCCCACCCTTCAGAAATCCAGCATAAT...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS-3UTR GCA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGCCAAGCTGGTTTAGATaGAACATTTTTCTCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MRQGSGVKQGLEESTIGEPSWFR*NIFLQC Trigger: ACACTGGAGAAAAATGTTGCATCTAAACCAGCTTGG...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS-3UTR CCA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTAAGTTCTTCAAAGGCTaGAGGACTGAGGTTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FMRQGSGVKQGLEESTIGKFFKG*RTEVSC Trigger: ACAGCTAACCTCAGTCCTCCAGCCTTTGAAGAACTT...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS-3UTR GCA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGGAGCTTTAATTAAATaGCAAGCTGGTTTAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: MRQGSGVKQGLEESTIGEGALIK*QAGLDA Trigger: TGCATCTAAACCAGCTTGGCATTTAATTAAAGCTCC...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS TCA 90 bp | TCAGGTATGACCCTGCCTGAGGGGCCAGGCATTGAGGGAGACTCCTaGCCCCCAGCTCCTTCTGTAGAGAGGCCTCCTGCCCTCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGMTLPEGPGIEGDS*PPAPSVERPPALLP Trigger: GGGGAGGAGGGCAGGAGGCCTCTCTACAGAAGGAGCTGGGGGTCAGGAGTCTCCCTCAATGCCTGGCCCCTCAGGCAGGGTCATACCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS TCA 90 bp | TGTCGGATGCAGATGTGGTCAGGGCTGAGGGAATTGGTTCAGGTATaGCCCTGCCTGAGGGGCCAGGCATTGAGGGAGACTCCTGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: CRMQMWSGLRELVQV*PCLRGQALRETPDP Trigger: GGGGTCAGGAGTCTCCCTCAATGCCTGGCCCCTCAGGCAGGGTCATACCTGAACCAATTCCCTCAGCCCTGACCACATCTGCATCCGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS-3UTR CAA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGTGCTCTGGAGCCCACTaGGGAGGTGAGGTCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: MRQGSGVKQGLEESTIGECSGAH*GGEVQP Trigger: GGGCTGGACCTCACCTCCCAAGTGGGCTCCAGAGCA...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS TCA 90 bp | CCAAAGCCACGGTGTTTTCAGATGCTCTGGAGCCCACTTGGGAGGTaGGGTCCAGCCCTGATCTTCCAGGAGATGCAGGCAACAGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: PKPRCFQMLWSPLGR*GPALIFQEMQATGT Trigger: AGTCCCTGTTGCCTGCATCTCCTGGAAGATCAGGGCTGGACCTCACCTCCCAAGTGGGCTCCAGAGCATCTGAAAACACCGTGGCTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS CCA 90 bp | GTGAAGCCAGAGCTATGTGCGGTAGAGGGAGGGCTAGAGAAATGTTaGAGGGAGAGCGTGGGCATGTGGATTGGGCTGGTGGGAAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VKPELCAVEGGLEKC*RESVGMWIGLVGSH Trigger: ATGGCTTCCCACCAGCCCAATCCACATGCCCACGCTCTCCCTCCAACATTTCTCTAGCCCTCCCTCTACCGCACATAGCTCTGGCTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS CCA 90 bp | GGACGAGGGATCCGGAGGACCAAAAATGAGGGAGGCTTTCACCTCTaGACAGCCAGGCCGAAACAGCAGGGCGCTGACATTCCTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GRGIRRTKNEGGFHL*TARPKQQGADIPEV Trigger: AACTTCAGGAATGTCAGCGCCCTGCTGTTTCGGCCTGGCTGTCCAGAGGTGAAAGCCTCCCTCATTTTTGGTCCTCCGGATCCCTCGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS TCA 90 bp | AGGGTGAGGGAGGGTAGAGGCCAGGGTAGGATCAGCATGTACAGATaGCTCTGTGAAGCCAGAGCTATGTGCGGTAGAGGGAGGGCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RVREGRGQGRISMYR*LCEARAMCGRGRAR Trigger: TCTAGCCCTCCCTCTACCGCACATAGCTCTGGCTTCACAGAGTCATCTGTACATGCTGATCCTACCCTGGCCTCTACCCTCCCTCACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS TCA 90 bp | TGGGTGACCAGCTGGATGGTCTGCTTTTCCAGCAGGATACAAGACTaGGAACTAGGCAGAAGCAGCTGGGGCAGGAAGGGCCTCATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: WVTSWMVCFSSRIQD*ELGRSSWGRKGLMS Trigger: ACTCATGAGGCCCTTCCTGCCCCAGCTGCTTCTGCCTAGTTCTCAGTCTTGTATCCTGCTGGAAAAGCAGACCATCCAGCTGGTCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS-3UTR CAA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGCCTGTGAAGGGGATGTaGCTGAGGGCAACAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: MRQGSGVKQGLEESTIGEPVKGM*LRATAA Trigger: TGCTGCTGTTGCCCTCAGCAACATCCCCTTCACAGG...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS CCA 90 bp | AGGAAAGGCCATGGTCGGCCAGGGACAGGTACCCAAGCGACCATCTaGAGGACTTCACTTTGCGGTACAAAGTCCAGAGGATTTCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: RKGHGRPGTGTQATI*RTSLCGTKSRGFLW Trigger: CCATAGAAATCCTCTGGACTTTGTACCGCAAAGTGAAGTCCTCCAGATGGTCGCTTGGGTACCTGTCCCTGGCCGACCATGGCCTTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS CCA 90 bp | TGGAGGACTGAGGTTAGCTGTCTCGTCAGCAGTCCACGAAGCTCCTaGCACTCAGAACTAGTCTTGTTCTCCAAGGTCTTGGTGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WRTEVSCLVSSPRSS*HSELVLFSKVLVKG Trigger: CCCCTTCACCAAGACCTTGGAGAACAAGACTAGTTCTGAGTGCCAGGAGCTTCGTGGACTGCTGACGAGACAGCTAACCTCAGTCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS-3UTR CAA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGCGTGGGCATGTGGATaGGGCTGGTGGGAAGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: FMRQGSGVKQGLEESTIGAWACG*GWWEAI Trigger: TATGGCTTCCCACCAGCCCAATCCACATGCCCACGC...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS-3UTR CAA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTCAGGGAGCCCAGGGCTaGGAGCACGGTGTCTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FMRQGSGVKQGLEESTIGQGAQG*EHGVLN Trigger: ATTCAAGACACCGTGCTCCAAGCCCTGGGCTCCCTG...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS-3UTR CAA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGTCCCTCTCAACTGAGTaGATACCACCAGTGACGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RQGSGVKQGLEESTIGEVSLSTE*IPPVTS Trigger: AGACGTCACTGGTGGTATCAACTCAGTTGAGAGGGA...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS GCA 90 bp | GAGGCAGGAACTGTCCCGCACAACCTGAAGACCTTGTCGAACTTCTaGTCAGATTCATGTCTGGGAGAAGGCTGTGGTGATGACATCGTA | + |
|
Preference number: 5 (lower is better) Translates to: EAGTVPHNLKTLSNF*SDSCLGEGCGDDIV Trigger: TACGATGTCATCACCACAGCCTTCTCCCAGACATGAATCTGAGCAGAAGTTCGACAAGGTCTTCAGGTTGTGCGGGACAGTTCCTGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS CCA 90 bp | GATCTGCTTTCTCCCCATTGGCCATTATGCTGGATTTCTGAAGGGTaGGATCTGTTATATGATGGGCCAGGTGACTGGCCAGGCCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DLLSPHWPLCWISEG*DLLYDGPGDWPGLG Trigger: TCCAAGGCCTGGCCAGTCACCTGGCCCATCATATAACAGATCCCACCCTTCAGAAATCCAGCATAATGGCCAATGGGGAGAAAGCAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS-3UTR CAA 90 bp | CGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGGTGCACTCAGAACTAGTCTaGTTCTCCAAGGTCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RQGSGVKQGLEESTIGEVHSELV*FSKVLV Trigger: CACCAAGACCTTGGAGAACAAGACTAGTTCTGAGTG...CACCTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS-3UTR CAA 90 bp | ATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGAGCACAACCTGAAGACCTaGTCGAACTTCTGCTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: MRQGSGVKQGLEESTIGEHNLKT*SNFCSD Trigger: ATCTGAGCAGAAGTTCGACAAGGTCTTCAGGTTGTG...CTCACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS-3UTR CAA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTGTGAAGCGATTGCTGTaGATCCTAAAGGTCACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FMRQGSGVKQGLEESTIGVKRLL*ILKVTE Trigger: CTCTGTGACCTTTAGGATCAACAGCAATCGCTTCAC...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS CCA 90 bp | TCTCATAAAACACCAGATCTGCTTTCTCCCCATTGGCCATTATGCTaGATTTCTGAAGGGTGGGATCTGTTATATGATGGGCCAGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SHKTPDLLSPHWPLC*ISEGWDLLYDGPGD Trigger: GTCACCTGGCCCATCATATAACAGATCCCACCCTTCAGAAATCCAGCATAATGGCCAATGGGGAGAAAGCAGATCTGGTGTTTTATGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS-3UTR CAA 90 bp | TTTATGCGGCAAGGAAGTGGGGTGAAGCAGGGGCTTGAAGAAAGTACCATAGGTAGTGTGAAGCTAATGTaGATGATTTCCTGGGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FMRQGSGVKQGLEESTIGSVKLM*MISWVR Trigger: CCTTACCCAGGAAATCATCAACATTAGCTTCACACT...ACCTATGGTACTTTCTTCAAGCCCCTGCTTCACCCCACTTCCTTGCCGCATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS GCA 90 bp | ACATCTCATAAAACACCAGATCTGCTTTCTCCCCATTGGCCATTATaGTGGATTTCTGAAGGGTGGGATCTGTTATATGATGGGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TSHKTPDLLSPHWPL*WISEGWDLLYDGPG Trigger: ACCTGGCCCATCATATAACAGATCCCACCCTTCAGAAATCCAGCATAATGGCCAATGGGGAGAAAGCAGATCTGGTGTTTTATGAGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS CCA 90 bp | TCAAGAGCCACATCTCATAAAACACCAGATCTGCTTTCTCCCCATTaGCCATTATGCTGGATTTCTGAAGGGTGGGATCTGTTATATGAT | + |
|
Preference number: 5 (lower is better) Translates to: SRATSHKTPDLLSPH*PLCWISEGWDLLYD Trigger: ATCATATAACAGATCCCACCCTTCAGAAATCCAGCATAATGGCCAATGGGGAGAAAGCAGATCTGGTGTTTTATGAGATGTGGCTCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS TCA 72 bp | GCAGGGAGCCCAGGGCTTGGAGCACGGTGTCTTGAATaGTGGCCTGGGCTGGCACAGCCCCAAAGAAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AGSPGLGARCLE*WPGLAQPQRRP Trigger: CGGCCTTCTTTGGGGCTGTGCCAGCCCAGGCCATCATTCAAGACACCGTGCTCCAAGCCCTGGGCTCCCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS TCA 72 bp | TCCTGCAGGGAGCCCAGGGCTTGGAGCACGGTGTCTTaGATGATGGCCTGGGCTGGCACAGCCCCAAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SCREPRAWSTVS*MMAWAGTAPKK Trigger: CTTCTTTGGGGCTGTGCCAGCCCAGGCCATCATTCAAGACACCGTGCTCCAAGCCCTGGGCTCCCTGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS GCA 72 bp | CTGGGGGTGCCAAGGACTGGGAGGAGCATCTCTAACTaGAGACCCTCAGTTTCCTGCAGGGAGCCCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LGVPRTGRSISN*RPSVSCREPRA Trigger: AGCCCTGGGCTCCCTGCAGGAAACTGAGGGTCTGCAGTTAGAGATGCTCCTCCCAGTCCTTGGCACCCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS CAA 72 bp | TTCCTGCAGGGAGCCCAGGGCTTGGAGCACGGTGTCTaGAATGATGGCCTGGGCTGGCACAGCCCCAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FLQGAQGLEHGV*NDGLGWHSPKE Trigger: TTCTTTGGGGCTGTGCCAGCCCAGGCCATCATTCAAGACACCGTGCTCCAAGCCCTGGGCTCCCTGCAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS TCA 72 bp | TGCTCTGGAGCCCACTTGGGAGGTGAGGTCCAGCCCTaGTCTTCCAGGAGATGCAGGCAACAGGGACTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CSGAHLGGEVQP*SSRRCRQQGLC Trigger: ACAGAGTCCCTGTTGCCTGCATCTCCTGGAAGATCAGGGCTGGACCTCACCTCCCAAGTGGGCTCCAGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS CCA 72 bp | GGGCTGGCACAGCCCCAAAGAAGGCCGTTTGTACCCTaGCAGTCAGTGGTTCCTGGTGGAATTCCTCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: GLAQPQRRPFVP*QSVVPGGIPPP Trigger: TGGTGGAGGAATTCCACCAGGAACCACTGACTGCCAGGGTACAAACGGCCTTCTTTGGGGCTGTGCCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS TCA 72 bp | CAGATGTGGTCAGGGCTGAGGGAATTGGTTCAGGTATaGCCCTGCCTGAGGGGCCAGGCATTGAGGGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: QMWSGLRELVQV*PCLRGQALRET Trigger: AGTCTCCCTCAATGCCTGGCCCCTCAGGCAGGGTCATACCTGAACCAATTCCCTCAGCCCTGACCACATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS TCA 72 bp | CGGTGTTTTCAGATGCTCTGGAGCCCACTTGGGAGGTaGGGTCCAGCCCTGATCTTCCAGGAGATGCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RCFQMLWSPLGR*GPALIFQEMQA Trigger: TGCCTGCATCTCCTGGAAGATCAGGGCTGGACCTCACCTCCCAAGTGGGCTCCAGAGCATCTGAAAACACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS TCA 72 bp | CAGGGGCTGGCTCTGGAGCTCAGCCTTGTAGAATCTTaGCACTTCGTGGGTGACCAGCTGGATGGTCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QGLALELSLVES*HFVGDQLDGLL Trigger: AAGCAGACCATCCAGCTGGTCACCCACGAAGTGTCAAGATTCTACAAGGCTGAGCTCCAGAGCCAGCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS CCA 72 bp | ATCCGGAGGACCAAAAATGAGGGAGGCTTTCACCTCTaGACAGCCAGGCCGAAACAGCAGGGCGCTGACATT | + |
|
Preference number: 6 (lower is better) Translates to: IRRTKNEGGFHL*TARPKQQGADI Trigger: AATGTCAGCGCCCTGCTGTTTCGGCCTGGCTGTCCAGAGGTGAAAGCCTCCCTCATTTTTGGTCCTCCGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS CCA 72 bp | CATGGTCGGCCAGGGACAGGTACCCAAGCGACCATCTaGAGGACTTCACTTTGCGGTACAAAGTCCAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HGRPGTGTQATI*RTSLCGTKSRG Trigger: TCCTCTGGACTTTGTACCGCAAAGTGAAGTCCTCCAGATGGTCGCTTGGGTACCTGTCCCTGGCCGACCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS CCA 72 bp | AGCCCCAAAGAAGGCCGTTTGTACCCTGGCAGTCAGTaGTTCCTGGTGGAATTCCTCCACCACCACTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: SPKEGRLYPGSQ*FLVEFLHHHLT Trigger: GGTCAAGTGGTGGTGGAGGAATTCCACCAGGAACCACTGACTGCCAGGGTACAAACGGCCTTCTTTGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS TCA 72 bp | TCTGTCAGGATGCCCAGTAGAATGCGGCTACTTTGCTaGGCTGATGTGCCAGGGGCTGAGGGAAACTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SVRMPSRMRLLC*ADVPGAEGNCS Trigger: TGAGCAGTTTCCCTCAGCCCCTGGCACATCAGCTCAGCAAAGTAGCCGCATTCTACTGGGCATCCTGACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS TCA 72 bp | ATGTGGATTGGGCTGGTGGGAAGCCATAGCCCAGGGTaGCTAGGTTGTAGAGCTATCTGGGGTCCGAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: MWIGLVGSHSPG*LGCRAIWGPRF Trigger: AAACCTCGGACCCCAGATAGCTCTACAACCTAGTCACCCTGGGCTATGGCTTCCCACCAGCCCAATCCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS TCA 72 bp | GAGGGTAGAGGCCAGGGTAGGATCAGCATGTACAGATaGCTCTGTGAAGCCAGAGCTATGTGCGGTAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: EGRGQGRISMYR*LCEARAMCGRG Trigger: CCCTCTACCGCACATAGCTCTGGCTTCACAGAGTCATCTGTACATGCTGATCCTACCCTGGCCTCTACCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS TCA 72 bp | AGCTGGATGGTCTGCTTTTCCAGCAGGATACAAGACTaGGAACTAGGCAGAAGCAGCTGGGGCAGGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SWMVCFSSRIQD*ELGRSSWGRKG Trigger: GCCCTTCCTGCCCCAGCTGCTTCTGCCTAGTTCTCAGTCTTGTATCCTGCTGGAAAAGCAGACCATCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS CCA 72 bp | AAAGCCACGGTGTTTTCAGATGCTCTGGAGCCCACTTaGGAGGTGAGGTCCAGCCCTGATCTTCCAGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: KATVFSDALEPT*EVRSSPDLPGD Trigger: ATCTCCTGGAAGATCAGGGCTGGACCTCACCTCCCAAGTGGGCTCCAGAGCATCTGAAAACACCGTGGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS TCA 72 bp | AAACTCAAGTCCTGCAAAGACATATCCTGGCCAGGGTaGGGGAGGGTAGAGGCCAGGGTAGGATCAGCATGT | + |
|
Preference number: 6 (lower is better) Translates to: KLKSCKDISWPG*GRVEARVGSAC Trigger: ACATGCTGATCCTACCCTGGCCTCTACCCTCCCTCACCCTGGCCAGGATATGTCTTTGCAGGACTTGAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS TCA 72 bp | GGAGCTCAGCCTTGTAGAATCTTGACACTTCGTGGGTaGCCAGCTGGATGGTCTGCTTTTCCAGCAGGATAC | + |
|
Preference number: 6 (lower is better) Translates to: GAQPCRILTLRG*PAGWSAFPAGY Trigger: GTATCCTGCTGGAAAAGCAGACCATCCAGCTGGTCACCCACGAAGTGTCAAGATTCTACAAGGCTGAGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS CCA 72 bp | GAGGTTAGCTGTCTCGTCAGCAGTCCACGAAGCTCCTaGCACTCAGAACTAGTCTTGTTCTCCAAGGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: EVSCLVSSPRSS*HSELVLFSKVL Trigger: CAAGACCTTGGAGAACAAGACTAGTTCTGAGTGCCAGGAGCTTCGTGGACTGCTGACGAGACAGCTAACCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS CAA 72 bp | ATCTGTTATATGATGGGCCAGGTGACTGGCCAGGCCTaGGAGACGGATGGGGATGGGGCTCTTGAATTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: ICYMMGQVTGQA*ETDGDGALEFV Trigger: TACAAATTCAAGAGCCCCATCCCCATCCGTCTCCAAGGCCTGGCCAGTCACCTGGCCCATCATATAACAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS CAA 90 bp | AAGGGTGGGATCTGTTATATGATGGGCCAGGTGACTGGCCAGGCCTaGGAGACGGATGGGGATGGGGCTCTTGAATTTGTATTCCATGTA | + |
|
Preference number: 6 (lower is better) Translates to: KGGICYMMGQVTGQA*ETDGDGALEFVFHV Trigger: TACATGGAATACAAATTCAAGAGCCCCATCCCCATCCGTCTCCAAGGCCTGGCCAGTCACCTGGCCCATCATATAACAGATCCCACCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
||
| CDS CAA 90 bp | AGAAGCAGCTGGGGCAGGAAGGGCCTCATGAGTGTGAAGCTAATGTaGATGATTTCCTGGGTAAGGTCAGTCATGCTGTACCCATCAGAG | + |
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Preference number: 6 (lower is better) Translates to: RSSWGRKGLMSVKLM*MISWVRSVMLYPSE Trigger: CTCTGATGGGTACAGCATGACTGACCTTACCCAGGAAATCATCAACATTAGCTTCACACTCATGAGGCCCTTCCTGCCCCAGCTGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS GCA 72 bp | ACTGTCCCGCACAACCTGAAGACCTTGTCGAACTTCTaGTCAGATTCATGTCTGGGAGAAGGCTGTGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: TVPHNLKTLSNF*SDSCLGEGCGD Trigger: ATCACCACAGCCTTCTCCCAGACATGAATCTGAGCAGAAGTTCGACAAGGTCTTCAGGTTGTGCGGGACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS GCA 72 bp | ACAGGTACCCAAGCGACCATCTGGAGGACTTCACTTTaGGGTACAAAGTCCAGAGGATTTCTATGGACGAGG | + |
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Preference number: 6 (lower is better) Translates to: TGTQATIWRTSL*GTKSRGFLWTR Trigger: CCTCGTCCATAGAAATCCTCTGGACTTTGTACCGCAAAGTGAAGTCCTCCAGATGGTCGCTTGGGTACCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS CAA 72 bp | GACAGGTACCCAAGCGACCATCTGGAGGACTTCACTTaGCGGTACAAAGTCCAGAGGATTTCTATGGACGAG | + |
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Preference number: 6 (lower is better) Translates to: DRYPSDHLEDFT*RYKVQRISMDE Trigger: CTCGTCCATAGAAATCCTCTGGACTTTGTACCGCAAAGTGAAGTCCTCCAGATGGTCGCTTGGGTACCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS CAA 72 bp | TGGGGCAGGAAGGGCCTCATGAGTGTGAAGCTAATGTaGATGATTTCCTGGGTAAGGTCAGTCATGCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: WGRKGLMSVKLM*MISWVRSVMLY Trigger: GTACAGCATGACTGACCTTACCCAGGAAATCATCAACATTAGCTTCACACTCATGAGGCCCTTCCTGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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| CDS GCA 72 bp | AAAACACCAGATCTGCTTTCTCCCCATTGGCCATTATaGTGGATTTCTGAAGGGTGGGATCTGTTATATGAT | + |
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Preference number: 6 (lower is better) Translates to: KTPDLLSPHWPL*WISEGWDLLYD Trigger: ATCATATAACAGATCCCACCCTTCAGAAATCCAGCATAATGGCCAATGGGGAGAAAGCAGATCTGGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093837.5 |
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