Pregenerated sensors for TRBV26 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000076479

Ensembl transcript IDs: ENSMUST00000103280.3, ENSMUST00000193064.2

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TTGTCCTTGCCCTTTCACCAGATATCTTGGAGTCTGAATGACTTTTaGATTCAAAATTGCACCCAGGAGACAAAGTACTGTGTAACAGAG	+
Preference number: 5 (lower is better) Translates to: LSLPFHQISWSLNDF*IQNCTQETKYCVTE Trigger: CTCTGTTACACAGTACTTTGTCTCCTGGGTGCAATTTTGAATTCAAAAGTCATTCAGACTCCAAGATATCTGGTGAAAGGGCAAGGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103280.3
CDS TCA 72 bp	CAGAGGTACAGTGCTGAGTCTCCTGCCTCAGAGGACTaGATTTCTAGGCTGCAAGGTGAGTTTGAAGGACAC	+
Preference number: 6 (lower is better) Translates to: QRYSAESPASED*ISRLQGEFEGH Trigger: GTGTCCTTCAAACTCACCTTGCAGCCTAGAAATTCAGTCCTCTGAGGCAGGAGACTCAGCACTGTACCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103280.3 ENSMUST00000193064.2
CDS GCA 72 bp	CTGAGTCTCCTGCCTCAGAGGACTGAATTTCTAGGCTaGAAGGTGAGTTTGAAGGACACTCAGCAGAGAATC	+
Preference number: 6 (lower is better) Translates to: LSLLPQRTEFLG*KVSLKDTQQRI Trigger: GATTCTCTGCTGAGTGTCCTTCAAACTCACCTTGCAGCCTAGAAATTCAGTCCTCTGAGGCAGGAGACTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103280.3 ENSMUST00000193064.2
CDS CAA 72 bp	CCTCAGAGGACTGAATTTCTAGGCTGCAAGGTGAGTTaGAAGGACACTCAGCAGAGAATCGTTTTTCAGTCA	+
Preference number: 6 (lower is better) Translates to: PQRTEFLGCKVS*KDTQQRIVFQS Trigger: TGACTGAAAAACGATTCTCTGCTGAGTGTCCTTCAAACTCACCTTGCAGCCTAGAAATTCAGTCCTCTGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103280.3 ENSMUST00000193064.2
CDS CAA 72 bp	ATGTCCCTTTTCAGGGATACACCTCATCTTTGCTTTTaGTCCTTGCCCTTTCACCAGATATCTTGGAGTCTG	+
Preference number: 6 (lower is better) Translates to: MSLFRDTPHLCF*SLPFHQISWSL Trigger: CAGACTCCAAGATATCTGGTGAAAGGGCAAGGACAAAAAGCAAAGATGAGGTGTATCCCTGAAAAGGGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103280.3 ENSMUST00000193064.2
CDS TCA 72 bp	GTCCTTGCCCTTTCACCAGATATCTTGGAGTCTGAATaGCTTTTGAATTCAAAATTCTTGCACCCAGGAGAC	+
Preference number: 6 (lower is better) Translates to: VLALSPDILESE*LLNSKFLHPGD Trigger: GTCTCCTGGGTGCAAGAATTTTGAATTCAAAAGTCATTCAGACTCCAAGATATCTGGTGAAAGGGCAAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193064.2
CDS TCA 72 bp	CCCTTTCACCAGATATCTTGGAGTCTGAATGACTTTTaGATTCAAAATTGCACCCAGGAGACAAAGTACTGT	+
Preference number: 6 (lower is better) Translates to: PFHQISWSLNDF*IQNCTQETKYC Trigger: ACAGTACTTTGTCTCCTGGGTGCAATTTTGAATTCAAAAGTCATTCAGACTCCAAGATATCTGGTGAAAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103280.3

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