Pregenerated sensors for TRBV19 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000076475

Ensembl transcript IDs: ENSMUST00000103276.3

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CACAGAGAAAAACGGCCATCTCGTTCTTCTGGGCAGATGTCACAGTaGGAGAAAAAGATGACTTCTTCTCTCGAGACGCATCATAGCCTT	+
Preference number: 5 (lower is better) Translates to: HREKRPSRSSGQMSQ*EKKMTSSLETHHSL Trigger: AAGGCTATGATGCGTCTCGAGAGAAGAAGTCATCTTTTTCTCTCACTGTGACATCTGCCCAGAAGAACGAGATGGCCGTTTTTCTCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103276.3
CDS TCA 72 bp	GTTCTTCTGGGCAGATGTCACAGTGAGAGAAAAAGATaGCTTCTTCTCTCGAGACGCATCATAGCCTTCAGA	+
Preference number: 6 (lower is better) Translates to: VLLGRCHSERKR*LLLSRRIIAFR Trigger: TCTGAAGGCTATGATGCGTCTCGAGAGAAGAAGTCATCTTTTTCTCTCACTGTGACATCTGCCCAGAAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103276.3
CDS CAA 72 bp	ATGATTGAAATTCTGTTGACATTTCAAGGTCAGTTTTaGCCCTTCCTGACCAATCAGGAATTTGGGTGTCTG	+
Preference number: 6 (lower is better) Translates to: MIEILLTFQGQF*PFLTNQEFGCL Trigger: CAGACACCCAAATTCCTGATTGGTCAGGAAGGGCAAAAACTGACCTTGAAATGTCAACAGAATTTCAATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103276.3

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