Pregenerated sensors for TRBV12-1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095574

Ensembl transcript IDs: ENSMUST00000103267.3

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TGTTCATTTCAGAGTGATAGTCATCAAACTGTTGGACTGAGAATCTaGTGGGTAGGAATCCTTTGTCTCTCTCCACCTTTTCATAATGCT	+
Preference number: 5 (lower is better) Translates to: CSFQSDSHQTVGLRI*WVGILCLSPPFHNA Trigger: AGCATTATGAAAAGGTGGAGAGAGACAAAGGATTCCTACCCAGCAGATTCTCAGTCCAACAGTTTGATGACTATCACTCTGAAATGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103267.3
CDS CCA 90 bp	TCATTTCAGAGTGATAGTCATCAAACTGTTGGACTGAGAATCTGCTaGGTAGGAATCCTTTGTCTCTCTCCACCTTTTCATAATGCTGAA	+
Preference number: 5 (lower is better) Translates to: SFQSDSHQTVGLRIC*VGILCLSPPFHNAE Trigger: TTCAGCATTATGAAAAGGTGGAGAGAGACAAAGGATTCCTACCCAGCAGATTCTCAGTCCAACAGTTTGATGACTATCACTCTGAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103267.3
CDS GCA 72 bp	ATTCCTTCCCCAGAGTCTGCTGGTACCAGACCACATTaGTATGTCCAGAGATGGGAATACACGTCAGAACGG	+
Preference number: 6 (lower is better) Translates to: IPSPESAGTRPH*YVQRWEYTSER Trigger: CCGTTCTGACGTGTATTCCCATCTCTGGACATAGCAATGTGGTCTGGTACCAGCAGACTCTGGGGAAGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103267.3
CDS CAA 72 bp	AATTCCTTCCCCAGAGTCTGCTGGTACCAGACCACATaGCTATGTCCAGAGATGGGAATACACGTCAGAACG	+
Preference number: 6 (lower is better) Translates to: NSFPRVCWYQTT*LCPEMGIHVRT Trigger: CGTTCTGACGTGTATTCCCATCTCTGGACATAGCAATGTGGTCTGGTACCAGCAGACTCTGGGGAAGGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103267.3
CDS TCA 72 bp	TATGTGTCTTGGAGACTGGACAACCCCAGAATCTGCTaGACTTGTTCCCAAGAGAAAGACAGTAACCCAAGA	+
Preference number: 6 (lower is better) Translates to: YVSWRLDNPRIC*TCSQEKDSNPR Trigger: TCTTGGGTTACTGTCTTTCTCTTGGGAACAAGTTCAGCAGATTCTGGGGTTGTCCAGTCTCCAAGACACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103267.3
CDS TCA 72 bp	GAATACACGTCAGAACGGACCTTCCTCCCTTTTCTTTaGTTATGTGTCTTGGAGACTGGACAACCCCAGAAT	+
Preference number: 6 (lower is better) Translates to: EYTSERTFLPFL*LCVLETGQPQN Trigger: ATTCTGGGGTTGTCCAGTCTCCAAGACACATAATCAAAGAAAAGGGAGGAAGGTCCGTTCTGACGTGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103267.3
CDS CCA 72 bp	CTTCCTCCCTTTTCTTTGATTATGTGTCTTGGAGACTaGACAACCCCAGAATCTGCTGAACTTGTTCCCAAG	+
Preference number: 6 (lower is better) Translates to: LPPFSLIMCLGD*TTPESAELVPK Trigger: CTTGGGAACAAGTTCAGCAGATTCTGGGGTTGTCCAGTCTCCAAGACACATAATCAAAGAAAAGGGAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103267.3

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