Pregenerated sensors for TRAV7N-4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095736

Ensembl transcript IDs: ENSMUST00000103609.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	AGAGAGGCCATGCCTCCCTCTGGGACACTGAGGGATTCTGGGCTCTaGTGCACCTTCTGCTGGCTCTTCACCCAGTTTAACTGGAGCCAC	+
Preference number: 5 (lower is better) Translates to: REAMPPSGTLRDSGL*CTFCWLFTQFNWSH Trigger: GTGGCTCCAGTTAAACTGGGTGAAGAGCCAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCAGTGTCCCAGAGGGAGGCATGGCCTCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103609.2
CDS GCA 72 bp	CCTCCCTCTGGGACACTGAGGGATTCTGGGCTCTGCTaGACCTTCTGCTGGCTCTTCACCCAGTTTAACTGG	+
Preference number: 6 (lower is better) Translates to: PPSGTLRDSGLC*TFCWLFTQFNW Trigger: CCAGTTAAACTGGGTGAAGAGCCAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCAGTGTCCCAGAGGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103609.2
CDS GCA 72 bp	ATGCCTCCCTCTGGGACACTGAGGGATTCTGGGCTCTaGTGCACCTTCTGCTGGCTCTTCACCCAGTTTAAC	+
Preference number: 6 (lower is better) Translates to: MPPSGTLRDSGL*CTFCWLFTQFN Trigger: GTTAAACTGGGTGAAGAGCCAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCAGTGTCCCAGAGGGAGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103609.2
CDS CCA 72 bp	ACACTGAGGGATTCTGGGCTCTGCTGCACCTTCTGCTaGCTCTTCACCCAGTTTAACTGGAGCCACAGGACC	+
Preference number: 6 (lower is better) Translates to: TLRDSGLCCTFC*LFTQFNWSHRT Trigger: GGTCCTGTGGCTCCAGTTAAACTGGGTGAAGAGCCAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103609.2
CDS CCA 72 bp	TGCTGCACCTTCTGCTGGCTCTTCACCCAGTTTAACTaGAGCCACAGGACCACTAGGGAAACACTCAAGGAT	+
Preference number: 6 (lower is better) Translates to: CCTFCWLFTQFN*SHRTTRETLKD Trigger: ATCCTTGAGTGTTTCCCTAGTGGTCCTGTGGCTCCAGTTAAACTGGGTGAAGAGCCAGCAGAAGGTGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103609.2

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