Pregenerated sensors for TRAV7D-4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094023

Ensembl transcript IDs: ENSMUST00000178768.4

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CCCTCTGGGACACTGAGGGATTCTGGGCTCTGCTGCACCTTCTGCTaGCTCCTCACGCAGTTTAACTGGAGCCACAGGACCACTAGTAAA	+
Preference number: 5 (lower is better) Translates to: PSGTLRDSGLCCTFC*LLTQFNWSHRTTSK Trigger: TTTACTAGTGGTCCTGTGGCTCCAGTTAAACTGCGTGAGGAGCCAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCAGTGTCCCAGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178768.4
CDS CCA 72 bp	ACACTGAGGGATTCTGGGCTCTGCTGCACCTTCTGCTaGCTCCTCACGCAGTTTAACTGGAGCCACAGGACC	+
Preference number: 6 (lower is better) Translates to: TLRDSGLCCTFC*LLTQFNWSHRT Trigger: GGTCCTGTGGCTCCAGTTAAACTGCGTGAGGAGCCAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCAGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178768.4
CDS CCA 72 bp	TGCTGCACCTTCTGCTGGCTCCTCACGCAGTTTAACTaGAGCCACAGGACCACTAGTAAAACACTCAAGGAT	+
Preference number: 6 (lower is better) Translates to: CCTFCWLLTQFN*SHRTTSKTLKD Trigger: ATCCTTGAGTGTTTTACTAGTGGTCCTGTGGCTCCAGTTAAACTGCGTGAGGAGCCAGCAGAAGGTGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178768.4
CDS TCA 72 bp	ATGTGCAGGGAAACATGCAGGCTGGCCTTATTGAGGTaGGCTGTGAATCTGCCTTCTTTCTTGTCACCATCA	+
Preference number: 6 (lower is better) Translates to: MCRETCRLALLR*AVNLPSFLSPS Trigger: TGATGGTGACAAGAAAGAAGGCAGATTCACAGCTCACCTCAATAAGGCCAGCCTGCATGTTTCCCTGCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178768.4

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