Pregenerated sensors for TRAV7-3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096908

Ensembl transcript IDs: ENSMUST00000177622.4

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GCTCCCTCTGGGACAATGAGGGATTCTGGGCTCTGCTGCACCTTCTaGTGGCTGTTCACCCAGTTTAACTGGAGCCACAGGACCACTAGG	+
Preference number: 5 (lower is better) Translates to: APSGTMRDSGLCCTF*WLFTQFNWSHRTTR Trigger: CCTAGTGGTCCTGTGGCTCCAGTTAAACTGGGTGAACAGCCAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCATTGTCCCAGAGGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177622.4
CDS GCA 90 bp	GAGGTCATGGCTCCCTCTGGGACAATGAGGGATTCTGGGCTCTGCTaGACCTTCTGCTGGCTGTTCACCCAGTTTAACTGGAGCCACAGG	+
Preference number: 5 (lower is better) Translates to: EVMAPSGTMRDSGLC*TFCWLFTQFNWSHR Trigger: CCTGTGGCTCCAGTTAAACTGGGTGAACAGCCAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCATTGTCCCAGAGGGAGCCATGACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177622.4
CDS GCA 90 bp	AGAGAGGTCATGGCTCCCTCTGGGACAATGAGGGATTCTGGGCTCTaGTGCACCTTCTGCTGGCTGTTCACCCAGTTTAACTGGAGCCAC	+
Preference number: 5 (lower is better) Translates to: REVMAPSGTMRDSGL*CTFCWLFTQFNWSH Trigger: GTGGCTCCAGTTAAACTGGGTGAACAGCCAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCATTGTCCCAGAGGGAGCCATGACCTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177622.4
CDS GCA 72 bp	GGGACAATGAGGGATTCTGGGCTCTGCTGCACCTTCTaGTGGCTGTTCACCCAGTTTAACTGGAGCCACAGG	+
Preference number: 6 (lower is better) Translates to: GTMRDSGLCCTF*WLFTQFNWSHR Trigger: CCTGTGGCTCCAGTTAAACTGGGTGAACAGCCAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCATTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177622.4
CDS GCA 72 bp	GCTCCCTCTGGGACAATGAGGGATTCTGGGCTCTGCTaGACCTTCTGCTGGCTGTTCACCCAGTTTAACTGG	+
Preference number: 6 (lower is better) Translates to: APSGTMRDSGLC*TFCWLFTQFNW Trigger: CCAGTTAAACTGGGTGAACAGCCAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCATTGTCCCAGAGGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177622.4
CDS GCA 72 bp	ATGGCTCCCTCTGGGACAATGAGGGATTCTGGGCTCTaGTGCACCTTCTGCTGGCTGTTCACCCAGTTTAAC	+
Preference number: 6 (lower is better) Translates to: MAPSGTMRDSGL*CTFCWLFTQFN Trigger: GTTAAACTGGGTGAACAGCCAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCATTGTCCCAGAGGGAGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177622.4
CDS CCA 72 bp	ACAATGAGGGATTCTGGGCTCTGCTGCACCTTCTGCTaGCTGTTCACCCAGTTTAACTGGAGCCACAGGACC	+
Preference number: 6 (lower is better) Translates to: TMRDSGLCCTFC*LFTQFNWSHRT Trigger: GGTCCTGTGGCTCCAGTTAAACTGGGTGAACAGCCAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177622.4

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