Pregenerated sensors for TRAV7-1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000104620

Ensembl transcript IDs: ENSMUST00000198019.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GAGTCTTTGATGTGCAGGGATACATGCAGGCTGGCCTTATTGAGGTaGGCTGTGAATCTGCCTTCCTTCTTGTCACCATTGGAGAAGATG	+
Preference number: 5 (lower is better) Translates to: ESLMCRDTCRLALLR*AVNLPSFLSPLEKM Trigger: CATCTTCTCCAATGGTGACAAGAAGGAAGGCAGATTCACAGCTCACCTCAATAAGGCCAGCCTGCATGTATCCCTGCACATCAAAGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198019.2
CDS GCA 72 bp	ATGCCTCCCTCTGGAACAATGAGGGATTCTGGGCTCTaGTGCACCTTCTGCTGGCTGTTCACCCAGTGTAGC	+
Preference number: 6 (lower is better) Translates to: MPPSGTMRDSGL*CTFCWLFTQCS Trigger: GCTACACTGGGTGAACAGCCAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCATTGTTCCAGAGGGAGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198019.2
CDS TCA 72 bp	TGCTGCACCTTCTGCTGGCTGTTCACCCAGTGTAGCTaGAGCCACAGGACCACTAGTGAAACACACAAGGAC	+
Preference number: 6 (lower is better) Translates to: CCTFCWLFTQCS*SHRTTSETHKD Trigger: GTCCTTGTGTGTTTCACTAGTGGTCCTGTGGCTTCAGCTACACTGGGTGAACAGCCAGCAGAAGGTGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198019.2

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