Pregenerated sensors for TRAV6-6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095862

Ensembl transcript IDs: ENSMUST00000103584.4

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ATTATCAGGGACTCGCTTTCTGAGACGGTCACTGGGCCTTCTGTTTaGGTCACGGAATCTCCGTGGGTCCTTCCAAGTATGAGAAGTATC	+
Preference number: 5 (lower is better) Translates to: IIRDSLSETVTGPSV*VTESPWVLPSMRSI Trigger: GATACTTCTCATACTTGGAAGGACCCACGGAGATTCCGTGACTCAAACAGAAGGCCCAGTGACCGTCTCAGAAAGCGAGTCCCTGATAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103584.4
CDS TCA 72 bp	GACTCGCTTTCTGAGACGGTCACTGGGCCTTCTGTTTaGGTCACGGAATCTCCGTGGGTCCTTCCAAGTATG	+
Preference number: 6 (lower is better) Translates to: DSLSETVTGPSV*VTESPWVLPSM Trigger: CATACTTGGAAGGACCCACGGAGATTCCGTGACTCAAACAGAAGGCCCAGTGACCGTCTCAGAAAGCGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103584.4
CDS TCA 72 bp	TTTGAGTCACGGAATCTCCGTGGGTCCTTCCAAGTATaGGAAGTATCACAGCCACGAAGCCTGGAGAAGAGT	+
Preference number: 6 (lower is better) Translates to: FESRNLRGSFQV*EVSQPRSLEKS Trigger: ACTCTTCTCCAGGCTTCGTGGCTGTGATACTTCTCATACTTGGAAGGACCCACGGAGATTCCGTGACTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103584.4

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