Pregenerated sensors for TRAV5-4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095607

Ensembl transcript IDs: ENSMUST00000103664.6

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	ATGCTGGCACTGGATCCCTCCTGGACTCTCAGGATGGAAGGAAGCTaGTCCACCTGCTCGCCTTGGCTCATCCCATCCAGCTGCAGCCAT	+
Preference number: 5 (lower is better) Translates to: MLALDPSWTLRMEGS*STCSPWLIPSSCSH Trigger: ATGGCTGCAGCTGGATGGGATGAGCCAAGGCGAGCAGGTGGAGCAGCTTCCTTCCATCCTGAGAGTCCAGGAGGGATCCAGTGCCAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103664.6
CDS GCA 72 bp	CTGGATCCCTCCTGGACTCTCAGGATGGAAGGAAGCTaGTCCACCTGCTCGCCTTGGCTCATCCCATCCAGC	+
Preference number: 6 (lower is better) Translates to: LDPSWTLRMEGS*STCSPWLIPSS Trigger: GCTGGATGGGATGAGCCAAGGCGAGCAGGTGGAGCAGCTTCCTTCCATCCTGAGAGTCCAGGAGGGATCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103664.6
CDS GCA 72 bp	TCCTGGACTCTCAGGATGGAAGGAAGCTGCTCCACCTaGTCGCCTTGGCTCATCCCATCCAGCTGCAGCCAT	+
Preference number: 6 (lower is better) Translates to: SWTLRMEGSCST*SPWLIPSSCSH Trigger: ATGGCTGCAGCTGGATGGGATGAGCCAAGGCGAGCAGGTGGAGCAGCTTCCTTCCATCCTGAGAGTCCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103664.6
CDS GCA 72 bp	TGCTCCACCTGCTCGCCTTGGCTCATCCCATCCAGCTaGAGCCATAGAAACATGAATAATGTAGGAGCATAT	+
Preference number: 6 (lower is better) Translates to: CSTCSPWLIPSS*SHRNMNNVGAY Trigger: ATATGCTCCTACATTATTCATGTTTCTATGGCTGCAGCTGGATGGGATGAGCCAAGGCGAGCAGGTGGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103664.6
CDS TCA 72 bp	AACGATGAGTTCTTGGATCTGCTTTCTTTCCATATTTaGACGAATGTCAATGATGAGCTTAGGATTCTCTCC	+
Preference number: 6 (lower is better) Translates to: NDEFLDLLSFHI*TNVNDELRILS Trigger: GGAGAGAATCCTAAGCTCATCATTGACATTCGTTCAAATATGGAAAGAAAGCAGATCCAAGAACTCATCGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103664.6

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