Pregenerated sensors for TRAV4N-4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000093969

Ensembl transcript IDs: ENSMUST00000103627.3

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 90 bp	GAATTCTTTCGGAACCACTGCACAGCCCTCATGGTGGTAGTAAAATaGCATCTCAGAGCAGAACCGGTTCCCTCGTGGAGGCTCAGGGCT	+
Preference number: 6 (lower is better) Translates to: EFFRNHCTALMVVVK*HLRAEPVPSWRLRA Trigger: AGCCCTGAGCCTCCACGAGGGAACCGGTTCTGCTCTGAGATGCAATTTTACTACCACCATGAGGGCTGTGCAGTGGTTCCGAAAGAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103627.3
CDS GCA 72 bp	TTGATGAGGCTGCCCCTGGAATTCTTTCGGAACCACTaGACAGCCCTCATGGTGGTAGTAAAATTGCATCTC	+
Preference number: 6 (lower is better) Translates to: LMRLPLEFFRNH*TALMVVVKLHL Trigger: GAGATGCAATTTTACTACCACCATGAGGGCTGTGCAGTGGTTCCGAAAGAATTCCAGGGGCAGCCTCATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103627.3

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