Pregenerated sensors for TRAV4-4-DV10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096096

Ensembl transcript IDs: ENSMUST00000103663.6

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 72 bp	TGGAACCACTGCACAGCCCTCATGGTGGTCGTAAAATaGCATCTCAGAGCAGAACCGGTTCCCTCGTGGAGG	+
Preference number: 6 (lower is better) Translates to: WNHCTALMVVVK*HLRAEPVPSWR Trigger: CCTCCACGAGGGAACCGGTTCTGCTCTGAGATGCAATTTTACGACCACCATGAGGGCTGTGCAGTGGTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103663.6
CDS CAA 90 bp	GAATTCTGTTGGAACCACTGCACAGCCCTCATGGTGGTCGTAAAATaGCATCTCAGAGCAGAACCGGTTCCCTCGTGGAGGCTCAGGGCT	+
Preference number: 6 (lower is better) Translates to: EFCWNHCTALMVVVK*HLRAEPVPSWRLRA Trigger: AGCCCTGAGCCTCCACGAGGGAACCGGTTCTGCTCTGAGATGCAATTTTACGACCACCATGAGGGCTGTGCAGTGGTTCCAACAGAATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103663.6
CDS GCA 72 bp	TTGATGAGGCTGCCCCTGGAATTCTGTTGGAACCACTaGACAGCCCTCATGGTGGTCGTAAAATTGCATCTC	+
Preference number: 6 (lower is better) Translates to: LMRLPLEFCWNH*TALMVVVKLHL Trigger: GAGATGCAATTTTACGACCACCATGAGGGCTGTGCAGTGGTTCCAACAGAATTCCAGGGGCAGCCTCATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103663.6
CDS CAA 72 bp	GTAGAACAGATTGATGAGGCTGCCCCTGGAATTCTGTaGGAACCACTGCACAGCCCTCATGGTGGTCGTAAA	+
Preference number: 6 (lower is better) Translates to: VEQIDEAAPGIL*EPLHSPHGGRK Trigger: TTTACGACCACCATGAGGGCTGTGCAGTGGTTCCAACAGAATTCCAGGGGCAGCCTCATCAATCTGTTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103663.6

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