Pregenerated sensors for TRAV21-DV12 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000076863

Ensembl transcript IDs: ENSMUST00000180938.3

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CCTGAAGAGGAACCTGTCGGTACCAATAGATGTACTCGTTTCCACTaGTTGTGGCGTGGCTACAAGGCAAGTGCACCGTTTCTCCTTCAG	+
Preference number: 5 (lower is better) Translates to: PEEEPVGTNRCTRFH*LWRGYKASAPFLLQ Trigger: CTGAAGGAGAAACGGTGCACTTGCCTTGTAGCCACGCCACAATCAGTGGAAACGAGTACATCTATTGGTACCGACAGGTTCCTCTTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180938.3
CDS TCA 90 bp	GTGGCTACAAGGCAAGTGCACCGTTTCTCCTTCAGTACTTTCCATTaGATCTGGTTGTGTAGTCTTAGCATCACCCGCAATACCCAAAGC	+
Preference number: 5 (lower is better) Translates to: VATRQVHRFSFSTFH*IWLCSLSITRNTQS Trigger: GCTTTGGGTATTGCGGGTGATGCTAAGACTACACAACCAGATTCAATGGAAAGTACTGAAGGAGAAACGGTGCACTTGCCTTGTAGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180938.3
CDS TCA 72 bp	GAACCTGTCGGTACCAATAGATGTACTCGTTTCCACTaGTTGTGGCGTGGCTACAAGGCAAGTGCACCGTTT	+
Preference number: 6 (lower is better) Translates to: EPVGTNRCTRFH*LWRGYKASAPF Trigger: AAACGGTGCACTTGCCTTGTAGCCACGCCACAATCAGTGGAAACGAGTACATCTATTGGTACCGACAGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180938.3

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