Pregenerated sensors for TRAV15D-1-DV6D-1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096653

Ensembl transcript IDs: ENSMUST00000103616.5, ENSMUST00000186370.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 72 bp	CAGGGTGAGTTCTTCGCCCTCCTGCCTGCTTGCTGTTaGCCAGACCTGAATCACTTTCTCGGCCACATTAGC	+
Preference number: 6 (lower is better) Translates to: QGEFFALLPACC*PDLNHFLGHIS Trigger: GCTAATGTGGCCGAGAAAGTGATTCAGGTCTGGTCAACAGCAAGCAGGCAGGAGGGCGAAGAACTCACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186370.2
CDS TCA 72 bp	CAGGGTGAGTTCTTCGCCCTCCTGCCTGCTTGCTGTTaGCCAGACCTGAATCACTTTCTCGGCCACATTAGA	+
Preference number: 6 (lower is better) Translates to: QGEFFALLPACC*PDLNHFLGHIR Trigger: TCTAATGTGGCCGAGAAAGTGATTCAGGTCTGGTCAACAGCAAGCAGGCAGGAGGGCGAAGAACTCACCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103616.5
CDS TCA 72 bp	TCTTCGCCCTCCTGCCTGCTTGCTGTTGACCAGACCTaGATCACTTTCTCGGCCACATTAGCAGAGAAAGCC	+
Preference number: 6 (lower is better) Translates to: SSPSCLLAVDQT*ITFSATLAEKA Trigger: GGCTTTCTCTGCTAATGTGGCCGAGAAAGTGATTCAGGTCTGGTCAACAGCAAGCAGGCAGGAGGGCGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186370.2
CDS TCA 72 bp	TCTTCGCCCTCCTGCCTGCTTGCTGTTGACCAGACCTaGATCACTTTCTCGGCCACATTAGATCCAGAGAAA	+
Preference number: 6 (lower is better) Translates to: SSPSCLLAVDQT*ITFSATLDPEK Trigger: TTTCTCTGGATCTAATGTGGCCGAGAAAGTGATTCAGGTCTGGTCAACAGCAAGCAGGCAGGAGGGCGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103616.5
CDS TCA 72 bp	AGAAGGTGCTTGTACCAGAAAAGATGGTATAAGACCTaGCTTGTCTCATATGAACAGTCCAGGGTGAGTTCT	+
Preference number: 6 (lower is better) Translates to: RRCLYQKRWYKT*LVSYEQSRVSS Trigger: AGAACTCACCCTGGACTGTTCATATGAGACAAGTCAGGTCTTATACCATCTTTTCTGGTACAAGCACCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103616.5 ENSMUST00000186370.2

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