Pregenerated sensors for TRAV15-2-DV6-2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000076848

Ensembl transcript IDs: ENSMUST00000103660.4

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 72 bp	GTCCAGGGTGACTTCTCCCCACTGACTGCTGCCTGTTaGCTGGACCTGAGTCACTCTCTGGGCCACATTGCA	+
Preference number: 6 (lower is better) Translates to: VQGDFSPLTAAC*LDLSHSLGHIA Trigger: TGCAATGTGGCCCAGAGAGTGACTCAGGTCCAGTCAACAGGCAGCAGTCAGTGGGGAGAAGTCACCCTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103660.4
CDS GCA 72 bp	CTGTTGACTGGACCTGAGTCACTCTCTGGGCCACATTaGATCCAGAGAAAGCCAAGGCCACCAGCACACAGA	+
Preference number: 6 (lower is better) Translates to: LLTGPESLSGPH*IQRKPRPPAHR Trigger: TCTGTGTGCTGGTGGCCTTGGCTTTCTCTGGATGCAATGTGGCCCAGAGAGTGACTCAGGTCCAGTCAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103660.4
CDS TCA 72 bp	AGGAGTATTCACTTGTCTCATATGAACAGTCCAGGGTaGCTTCTCCCCACTGACTGCTGCCTGTTGACTGGA	+
Preference number: 6 (lower is better) Translates to: RSIHLSHMNSPG*LLPTDCCLLTG Trigger: TCCAGTCAACAGGCAGCAGTCAGTGGGGAGAAGTCACCCTGGACTGTTCATATGAGACAAGTGAATACTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103660.4

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