Pregenerated sensors for TRAV14D-3-DV8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094619

Ensembl transcript IDs: ENSMUST00000103608.4

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GTCTCTCCTTCCCAGACTGTCAGAGATTGGGGACTTTGTCTCACCTaGTGCTGGTCACGTTTCTCCTGCTGGCCACTCACCCCAGCTAGG	+
Preference number: 5 (lower is better) Translates to: VSPSQTVRDWGLCLT*CWSRFSCWPLTPAR Trigger: CCTAGCTGGGGTGAGTGGCCAGCAGGAGAAACGTGACCAGCAGCAGGTGAGACAAAGTCCCCAATCTCTGACAGTCTGGGAAGGAGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103608.4
CDS GCA 72 bp	CAGACTGTCAGAGATTGGGGACTTTGTCTCACCTGCTaGTGGTCACGTTTCTCCTGCTGGCCACTCACCCCA	+
Preference number: 6 (lower is better) Translates to: QTVRDWGLCLTC*WSRFSCWPLTP Trigger: TGGGGTGAGTGGCCAGCAGGAGAAACGTGACCAGCAGCAGGTGAGACAAAGTCCCCAATCTCTGACAGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103608.4
CDS GCA 72 bp	TCCCAGACTGTCAGAGATTGGGGACTTTGTCTCACCTaGTGCTGGTCACGTTTCTCCTGCTGGCCACTCACC	+
Preference number: 6 (lower is better) Translates to: SQTVRDWGLCLT*CWSRFSCWPLT Trigger: GGTGAGTGGCCAGCAGGAGAAACGTGACCAGCAGCAGGTGAGACAAAGTCCCCAATCTCTGACAGTCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103608.4
CDS CCA 72 bp	ACTGTCAGAGATTGGGGACTTTGTCTCACCTGCTGCTaGTCACGTTTCTCCTGCTGGCCACTCACCCCAGCT	+
Preference number: 6 (lower is better) Translates to: TVRDWGLCLTCC*SRFSCWPLTPA Trigger: AGCTGGGGTGAGTGGCCAGCAGGAGAAACGTGACCAGCAGCAGGTGAGACAAAGTCCCCAATCTCTGACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103608.4
CDS CAA 90 bp	ACTGCAGTTCAGAATTGCGGTCTCTCCTTCCCAGACTGTCAGAGATaGGGGACTTTGTCTCACCTGCTGCTGGTCACGTTTCTCCTGCTG	+
Preference number: 6 (lower is better) Translates to: TAVQNCGLSFPDCQR*GTLSHLLLVTFLLL Trigger: CAGCAGGAGAAACGTGACCAGCAGCAGGTGAGACAAAGTCCCCAATCTCTGACAGTCTGGGAAGGAGAGACCGCAATTCTGAACTGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103608.4
CDS CCA 72 bp	ATCGTCCATCTTCCTTTTTATCGGACACTGAAAGTATaGATATCAGGAGAGCGGGACCTTCCCCAGGGAACT	+
Preference number: 6 (lower is better) Translates to: IVHLPFYRTLKV*ISGERDLPQGT Trigger: AGTTCCCTGGGGAAGGTCCCGCTCTCCTGATATCCATACTTTCAGTGTCCGATAAAAAGGAAGATGGACGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103608.4

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