Pregenerated sensors for TRAV13-1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000076839

Ensembl transcript IDs: ENSMUST00000103651.4

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TCAGTCTCCCACTATGCTTTGTCCCAGAAGGATTGTAGAACAGGCTaGCGAGACTTCCCCCAGGACGTTGGTAAAACCACTGCATACTGT	+
Preference number: 5 (lower is better) Translates to: SVSHYALSQKDCRTG*RDFPQDVGKTTAYC Trigger: ACAGTATGCAGTGGTTTTACCAACGTCCTGGGGGAAGTCTCGTCAGCCTGTTCTACAATCCTTCTGGGACAAAGCATAGTGGGAGACTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103651.4
CDS CAA 72 bp	ATTGTAGAACAGGCTGACGAGACTTCCCCCAGGACGTaGGTAAAACCACTGCATACTGTTCAAAGATGTGGA	+
Preference number: 6 (lower is better) Translates to: IVEQADETSPRT*VKPLHTVQRCG Trigger: TCCACATCTTTGAACAGTATGCAGTGGTTTTACCAACGTCCTGGGGGAAGTCTCGTCAGCCTGTTCTACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103651.4

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