Pregenerated sensors for TRAV12D-3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094607Ensembl transcript IDs: ENSMUST00000177703.3
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 72 bp | GGCAACCCTTCTGTGAGAGTGACCAGGCCTTCTGTCTaGGTCACGGAGTCTCCATCGCCATTGCTCCTCCTG | + |
Preference number: 6 (lower is better) Translates to: GNPSVRVTRPSV*VTESPSPLLLL Trigger: CAGGAGGAGCAATGGCGATGGAGACTCCGTGACCCAGACAGAAGGCCTGGTCACTCTCACAGAAGGGTTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177703.3 |
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CDS CAA 90 bp | AGAGTGACCAGGCCTTCTGTCTGGGTCACGGAGTCTCCATCGCCATaGCTCCTCCTGAGCATTAGGAGGAGCACAAGAACTGAGCAGGTG | + |
Preference number: 6 (lower is better) Translates to: RVTRPSVWVTESPSP*LLLSIRRSTRTEQV Trigger: CACCTGCTCAGTTCTTGTGCTCCTCCTAATGCTCAGGAGGAGCAATGGCGATGGAGACTCCGTGACCCAGACAGAAGGCCTGGTCACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177703.3 |
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CDS CAA 90 bp | CTGCTCTTATGGAGAGTGGCGTGGAACCCTTGGTGCTCGGTCCTCTaGTTGTCTGTGAAGCTCTTCAGGAGTAGCCGAGGGGATTCATTG | + |
Preference number: 6 (lower is better) Translates to: LLLWRVAWNPWCSVL*LSVKLFRSSRGDSL Trigger: CAATGAATCCCCTCGGCTACTCCTGAAGAGCTTCACAGACAACAAGAGGACCGAGCACCAAGGGTTCCACGCCACTCTCCATAAGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177703.3 |
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CDS CAA 90 bp | CTCTTATGGAGAGTGGCGTGGAACCCTTGGTGCTCGGTCCTCTTGTaGTCTGTGAAGCTCTTCAGGAGTAGCCGAGGGGATTCATTGAGA | + |
Preference number: 6 (lower is better) Translates to: LLWRVAWNPWCSVLL*SVKLFRSSRGDSLR Trigger: TCTCAATGAATCCCCTCGGCTACTCCTGAAGAGCTTCACAGACAACAAGAGGACCGAGCACCAAGGGTTCCACGCCACTCTCCATAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177703.3 |