Pregenerated sensors for TRAV10N (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095646

Ensembl transcript IDs: ENSMUST00000103612.2

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TCTCGAACACTCAGTGTAGACTCGTGTTGCTCGACCTTCTCTCCATaGCTTTCCCAGTCCATCCACAGCCACAAGAATAGGAATACAGTG	+
Preference number: 5 (lower is better) Translates to: SRTLSVDSCCSTFSP*LSQSIHSHKNRNTV Trigger: CACTGTATTCCTATTCTTGTGGCTGTGGATGGACTGGGAAAGCCATGGAGAGAAGGTCGAGCAACACGAGTCTACACTGAGTGTTCGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103612.2
CDS GCA 72 bp	CTGTCTCCCTCTCGAACACTCAGTGTAGACTCGTGTTaGTCGACCTTCTCTCCATGGCTTTCCCAGTCCATC	+
Preference number: 6 (lower is better) Translates to: LSPSRTLSVDSC*STFSPWLSQSI Trigger: GATGGACTGGGAAAGCCATGGAGAGAAGGTCGAGCAACACGAGTCTACACTGAGTGTTCGAGAGGGAGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103612.2
CDS CCA 72 bp	CTCAGTGTAGACTCGTGTTGCTCGACCTTCTCTCCATaGCTTTCCCAGTCCATCCACAGCCACAAGAATAGG	+
Preference number: 6 (lower is better) Translates to: LSVDSCCSTFSP*LSQSIHSHKNR Trigger: CCTATTCTTGTGGCTGTGGATGGACTGGGAAAGCCATGGAGAGAAGGTCGAGCAACACGAGTCTACACTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103612.2
CDS CAA 72 bp	TCTATCACAAAGTGGAGACTCTTTCCAGCTTCTTGCTaGTACCAAGGGAAGTATGATGAGGCAGTATCTGTG	+
Preference number: 6 (lower is better) Translates to: SITKWRLFPASC*YQGKYDEAVSV Trigger: CACAGATACTGCCTCATCATACTTCCCTTGGTACAAGCAAGAAGCTGGAAAGAGTCTCCACTTTGTGATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103612.2

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