Pregenerated sensors for TRAV10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096551Ensembl transcript IDs: ENSMUST00000103583.5
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCTCGAACACTCAGTGTAGACTCATGTTGCTCGACCTTCTCTCCATaGCTCTCCCAGTCCATCCATAGCCACAAGAATAGGAATACAGTG | + |
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Preference number: 5 (lower is better) Translates to: SRTLSVDSCCSTFSP*LSQSIHSHKNRNTV Trigger: CACTGTATTCCTATTCTTGTGGCTATGGATGGACTGGGAGAGCCATGGAGAGAAGGTCGAGCAACATGAGTCTACACTGAGTGTTCGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103583.5 |
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| CDS GCA 72 bp | CTGTCTCCCTCTCGAACACTCAGTGTAGACTCATGTTaGTCGACCTTCTCTCCATGGCTCTCCCAGTCCATC | + |
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Preference number: 6 (lower is better) Translates to: LSPSRTLSVDSC*STFSPWLSQSI Trigger: GATGGACTGGGAGAGCCATGGAGAGAAGGTCGAGCAACATGAGTCTACACTGAGTGTTCGAGAGGGAGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103583.5 |
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| CDS CCA 72 bp | CTCAGTGTAGACTCATGTTGCTCGACCTTCTCTCCATaGCTCTCCCAGTCCATCCATAGCCACAAGAATAGG | + |
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Preference number: 6 (lower is better) Translates to: LSVDSCCSTFSP*LSQSIHSHKNR Trigger: CCTATTCTTGTGGCTATGGATGGACTGGGAGAGCCATGGAGAGAAGGTCGAGCAACATGAGTCTACACTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103583.5 |
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| CDS CAA 72 bp | TCTATCACAAAGTGGAGACTCTTTCCAGCTTCTTGCTaGTACCAAGGGAAGTATGATGAAGCAGTATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SITKWRLFPASC*YQGKYDEAVSV Trigger: CACAGATACTGCTTCATCATACTTCCCTTGGTACAAGCAAGAAGCTGGAAAGAGTCTCCACTTTGTGATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103583.5 |
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| CDS TCA 72 bp | AACTATAAGTCTTTGGCTCTGTTTTCTGTCCACATTTaGACGAATGTCTATCACAAAGTGGAGACTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: NYKSLALFSVHI*TNVYHKVETLS Trigger: GGAAAGAGTCTCCACTTTGTGATAGACATTCGTTCAAATGTGGACAGAAAACAGAGCCAAAGACTTATAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103583.5 |
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