Pregenerated sensors for TRAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030775Ensembl transcript IDs: ENSMUST00000170861.4, ENSMUST00000231701.3, ENSMUST00000239408.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGTTTCCTGGGCCTTCTGCGTTTCCCCTTCACGCTGTGATCCAGTaGGGCATAGCACATCTGAGCTTCAGCCGGTACCTGTGCAGGTGC | + |
|
Preference number: 1 (lower is better) Translates to: LFPGPSAFPLHAVIQ*GIAHLSFSRYLCRC Trigger: GCACCTGCACAGGTACCGGCTGAAGCTCAGATGTGCTATGCCTCACTGGATCACAGCGTGAAGGGGAAACGCAGAAGGCCCAGGAAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR GCA 90 bp | TTCAGCCGGTACCTGTGCAGGTGCAGCCACTTCCTGCGGATCGCTTaGAGATCTCTGAGGTCGACCTTTCATTTGTTCATAGCAGTTCTC | + |
|
Preference number: 1 (lower is better) Translates to: FSRYLCRCSHFLRIA*RSLRSTFHLFIAVL Trigger: GAGAACTGCTATGAACAAATGAAAGGTCGACCTCAGAGATCTGCAAGCGATCCGCAGGAAGTGGCTGCACCTGCACAGGTACCGGCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR TCA 90 bp | GATGCAATCCATGAAGAGAAAGGAAGGTACCATCCCATTGACAAATaGGCAGACCGTCACCTTGCCAGTCCCTGTGTGTCACATGAGGGA | + |
|
Preference number: 1 (lower is better) Translates to: DAIHEEKGRYHPIDK*ADRHLASPCVSHEG Trigger: TCCCTCATGTGACACACAGGGACTGGCAAGGTGACGGTCTGCTCATTTGTCAATGGGATGGTACCTTCCTTTCTCTTCATGGATTGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR TCA 90 bp | TCTCTCTTGGCACGGATCAACCCAAACAGTCTAGCGGGATCATCATaGATGCTTTCCTCTACTACCTGGTTATCTGGTGGGAAACTTTCT | + |
|
Preference number: 1 (lower is better) Translates to: SLLARINPNSLAGSS*MLSSTTWLSGGKLS Trigger: AGAAAGTTTCCCACCAGATAACCAGGTAGTAGAGGAAAGCATTCATGATGATCCCGCTAGACTGTTTGGGTTGATCCGTGCCAAGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR TCA 90 bp | AACGTTGGCATCCATTGTATAGACTTGTGTATCCTTTCCTCTGTCTaGCACATTAGTATTCTGTTTCCTGGGCCTTCTGCGTTTCCCCTT | + |
|
Preference number: 1 (lower is better) Translates to: NVGIHCIDLCILSSV*HISILFPGPSAFPL Trigger: AAGGGGAAACGCAGAAGGCCCAGGAAACAGAATACTAATGTGTCAGACAGAGGAAAGGATACACAAGTCTATACAATGGATGCCAACGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR TCA 90 bp | AATGAGATACAATGCAGACATCAGAATTTTGAGACAGACTTGGGATaGAGCTCAGGATGGAGCACTCGTCTTTCATCTGAAAGACCCTGT | + |
|
Preference number: 1 (lower is better) Translates to: NEIQCRHQNFETDLG*SSGWSTRLSSERPC Trigger: ACAGGGTCTTTCAGATGAAAGACGAGTGCTCCATCCTGAGCTTCATCCCAAGTCTGTCTCAAAATTCTGATGTCTGCATTGTATCTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR CCA 90 bp | AGCGGGATCATCATGAATGCTTTCCTCTACTACCTGGTTATCTGGTaGGAAACTTTCTACCATATTGATCTGAGAAACGTTGGCATCCAT | + |
|
Preference number: 1 (lower is better) Translates to: SGIIMNAFLYYLVIW*ETFYHIDLRNVGIH Trigger: ATGGATGCCAACGTTTCTCAGATCAATATGGTAGAAAGTTTCCCACCAGATAACCAGGTAGTAGAGGAAAGCATTCATGATGATCCCGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR CCA 90 bp | TCTAGCGGGATCATCATGAATGCTTTCCTCTACTACCTGGTTATCTaGTGGGAAACTTTCTACCATATTGATCTGAGAAACGTTGGCATC | + |
|
Preference number: 1 (lower is better) Translates to: SSGIIMNAFLYYLVI*WETFYHIDLRNVGI Trigger: GATGCCAACGTTTCTCAGATCAATATGGTAGAAAGTTTCCCACCAGATAACCAGGTAGTAGAGGAAAGCATTCATGATGATCCCGCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR CCA 90 bp | CATGCTGTGCTGAGGTTTATTGAGTTAACTGTTTGGGAGACAATGTaGGATAAGCCTTTAGAATCTAAGGGGTATGCCTACTTTTGGTCC | + |
|
Preference number: 1 (lower is better) Translates to: HAVLRFIELTVWETM*DKPLESKGYAYFWS Trigger: GGACCAAAAGTAGGCATACCCCTTAGATTCTAAAGGCTTATCCCACATTGTCTCCCAAACAGTTAACTCAATAAACCTCAGCACAGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR TCA 90 bp | GACATGTGGGGTACCAGACAGAACCCTGCGTGGGTACAAAGAACATaGGAATGTCTAGACAGTCTTATTACATGGAAAATTATGAAAGTA | + |
|
Preference number: 1 (lower is better) Translates to: DMWGTRQNPAWVQRT*ECLDSLITWKIMKV Trigger: TACTTTCATAATTTTCCATGTAATAAGACTGTCTAGACATTCTCATGTTCTTTGTACCCACGCAGGGTTCTGTCTGGTACCCCACATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR TCA 90 bp | TTTCCTCTACTACCTGGTTATCTGGTGGGAAACTTTCTACCATATTaGTCTGAGAAACGTTGGCATCCATTGTATAGACTTGTGTATCCT | + |
|
Preference number: 1 (lower is better) Translates to: FPLLPGYLVGNFLPY*SEKRWHPLYRLVYP Trigger: AGGATACACAAGTCTATACAATGGATGCCAACGTTTCTCAGATCAATATGGTAGAAAGTTTCCCACCAGATAACCAGGTAGTAGAGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR CAA 90 bp | CTTCAGCCGGTACCTGTGCAGGTGCAGCCACTTCCTGCGGATCGCTaGCAGATCTCTGAGGTCGACCTTTCATTTGTTCATAGCAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LQPVPVQVQPLPADR*QISEVDLSFVHSSS Trigger: AGAACTGCTATGAACAAATGAAAGGTCGACCTCAGAGATCTGCAAGCGATCCGCAGGAAGTGGCTGCACCTGCACAGGTACCGGCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGTATTTGCCAGGCTCGGACAGAGCCTCCCAGGAGAACAAACAGAATTTTAGGAAGCGGGAGTGGGTaGGTTGGGAAGCAAGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LCICQARTEPPRRTNRILGSGSG*VGKQGE Trigger: CTCTCCTTGCTTCCCAACCCACCCACTCCCGCTTCC...TAAAATTCTGTTTGTTCTCCTGGGAGGCTCTGTCCGAGCCTGGCAAATACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGTACCCCCTTAGCTCCCTGGGACTAAACCACCAACCACAGAAAACACTTGGTAGAGAGAGGGGTCACTaGCAGAAAGCAAGAGGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: QYPLSSLGLNHQPQKTLGRERGH*QKARGV Trigger: AACCCCTCTTGCTTTCTGTCAGTGACCCCTCTCTCT...ACCAAGTGTTTTCTGTGGTTGGTGGTTTAGTCCCAGGGAGCTAAGGGGGTACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR CAA 90 bp | TGTGCAGGGATGCAATCCATGAAGAGAAAGGAAGGTACCATCCCATaGACAAATGAGCAGACCGTCACCTTGCCAGTCCCTGTGTGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: CAGMQSMKRKEGTIP*TNEQTVTLPVPVCH Trigger: GTGACACACAGGGACTGGCAAGGTGACGGTCTGCTCATTTGTCAATGGGATGGTACCTTCCTTTCTCTTCATGGATTGCATCCCTGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR CAA 90 bp | ACTGTGCTCAGTCCAATGGTTGGCTGTGAGCATCTGCCTCTGTATTaGCCAGGCTCGGACAGAGCCTCCCAGGAGAACAAACAGAATTTT | + |
|
Preference number: 2 (lower is better) Translates to: TVLSPMVGCEHLPLY*PGSDRASQENKQNF Trigger: AAAATTCTGTTTGTTCTCCTGGGAGGCTCTGTCCGAGCCTGGCAAATACAGAGGCAGATGCTCACAGCCAACCATTGGACTGAGCACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGTCTAGCGGGATCATCATGAATGCTTTCCTCTACTACCTGGTTATCTGGTGGGTTTCCTGGGCCTTCTaGGTTTCCCCTTCACGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: QSSGIIMNAFLYYLVIWWVSWAF*VSPSRC Trigger: ACAGCGTGAAGGGGAAACGCAGAAGGCCCAGGAAAC...CCACCAGATAACCAGGTAGTAGAGGAAAGCATTCATGATGATCCCGCTAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR-3UTR GCA 90 bp | CTCTGTATTTGCCAGGCTCGGACAGAGCCTCCCAGGAGAACAAACAGAATTTTACCTCAGCCTCCTGCATaGTGGGTCACAGCAATACCT | + |
|
Preference number: 2 (lower is better) Translates to: LCICQARTEPPRRTNRILPQPPA*WVTAIP Trigger: AGGTATTGCTGTGACCCAGCATGCAGGAGGCTGAGG...TAAAATTCTGTTTGTTCTCCTGGGAGGCTCTGTCCGAGCCTGGCAAATACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR TCA 90 bp | GGGTACCAGACAGAACCCTGCGTGGGTACAAAGAACATGAGAATGTCTAGACAGGCAAGAGGGGTTGTATaGAGAGGTTTGGGGATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GYQTEPCVGTKNMRMSRQARGVV*RGLGIR Trigger: CCTTATCCCCAAACCTCTTCATACAACCCCTCTTGC...CTGTCTAGACATTCTCATGTTCTTTGTACCCACGCAGGGTTCTGTCTGGTACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGTATTTGCCAGGCTCGGACAGAGCCTCCCAGGAGAACAAACAGAATTTTAAAGTACCCAAGGAGCTaGAGGGGTTTGCAGTCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: LCICQARTEPPRRTNRILKYPRS*RGLQSH Trigger: ATGGGACTGCAAACCCCTTCAGCTCCTTGGGTACTT...TAAAATTCTGTTTGTTCTCCTGGGAGGCTCTGTCCGAGCCTGGCAAATACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGTATTTGCCAGGCTCGGACAGAGCCTCCCAGGAGAACAAACAGAATTTTAAGAAGTCCTTTAAGCTaGCATGTGGGGTACCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: LCICQARTEPPRRTNRILRSPLS*HVGYQT Trigger: TGTCTGGTACCCCACATGTCAGCTTAAAGGACTTCT...TAAAATTCTGTTTGTTCTCCTGGGAGGCTCTGTCCGAGCCTGGCAAATACAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR CAA 90 bp | GATATTGTTGTTCTTCCTATGGGGTTGCAAACCCCTTCAACTCCTTaGGTCCTTTCTCTAACTCCTCCATTGGTGACTGTGCTCAGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: DIVVLPMGLQTPSTP*VLSLTPPLVTVLSP Trigger: TGGACTGAGCACAGTCACCAATGGAGGAGTTAGAGAAAGGACCAAAGGAGTTGAAGGGGTTTGCAACCCCATAGGAAGAACAACAATATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR TCA 90 bp | ATTAATCTGAGATGGCCTGGAGCTAACACAGTTCTCTCTACCTCAGCCTCCTGCTGTGCTGAGGTTTATTaGGTTAACTGTTTGGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: INLRWPGANTVLSTSASCCAEVY*VNCLGD Trigger: GTCTCCCAAACAGTTAACTCAATAAACCTCAGCACA...GCAGGAGGCTGAGGTAGAGAGAACTGTGTTAGCTCCAGGCCATCTCAGATTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTCAGAGACAAAGTTTGGAGCAGAGACTGAAGGAATGGCCATCCAGAGACTGCCAGCAGGTTTTTAGATaGCATCTCTGTGTCCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: FQRQSLEQRLKEWPSRDCQQVFR*HLCVPE Trigger: TTCTGGGACACAGAGATGCCATCTAAAAACCTGCTG...GCAGTCTCTGGATGGCCATTCCTTCAGTCTCTGCTCCAAACTTTGTCTCTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGTATTTGCCAGGCTCGGACAGAGCCTCCCAGGAGAACAAACAGAATTTTATGTCAGACATTACTCTaGGGAAGCATACAGGTATCA | + |
|
Preference number: 2 (lower is better) Translates to: LCICQARTEPPRRTNRILCQTLL*GSIQVS Trigger: TGATACCTGTATGCTTCCTCAGAGTAATGTCTGACA...TAAAATTCTGTTTGTTCTCCTGGGAGGCTCTGTCCGAGCCTGGCAAATACAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR CCA 90 bp | ACTCTGAGGAAGCATACAGGTATCACAAAGGTGCCCAGAGAACTCCTCTGTAGACTCATTAATCTGAGATaGCCTGGAGCTAACACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: TLRKHTGITKVPRELLCRLINLR*PGANTV Trigger: AACTGTGTTAGCTCCAGGCCATCTCAGATTAATGAG...TCTACAGAGGAGTTCTCTGGGCACCTTTGTGATACCTGTATGCTTCCTCAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR TCA 90 bp | GGGTACCAGACAGAACCCTGCGTGGGTACAAAGAACATGAGAATGTCTAGACAGGACCTTTCAGAGATCTaGCCTATGGAAATTAACAAT | + |
|
Preference number: 2 (lower is better) Translates to: GYQTEPCVGTKNMRMSRQDLSEI*PMEINN Trigger: ATTGTTAATTTCCATAGGTCAGATCTCTGAAAGGTC...CTGTCTAGACATTCTCATGTTCTTTGTACCCACGCAGGGTTCTGTCTGGTACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR CCA 90 bp | TTAGATTACAGGCTCTCTCTTGGCACGGATCAACCCAAACAGTCTAGCGGGATCTACCTGGTTATCTGGTaGGAAACTTTCTACCATATT | + |
|
Preference number: 2 (lower is better) Translates to: LDYRLSLGTDQPKQSSGIYLVIW*ETFYHI Trigger: AATATGGTAGAAAGTTTCCCACCAGATAACCAGGTA...GATCCCGCTAGACTGTTTGGGTTGATCCGTGCCAAGAGAGAGCCTGTAATCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGTATTTGCCAGGCTCGGACAGAGCCTCCCAGGAGAACAAACAGAATTTTAAGGACAAAATACCCATaGAAGGAGTTTCAGAGACAA | + |
|
Preference number: 2 (lower is better) Translates to: LCICQARTEPPRRTNRILRTKYP*KEFQRQ Trigger: TTGTCTCTGAAACTCCTTCCATGGGTATTTTGTCCT...TAAAATTCTGTTTGTTCTCCTGGGAGGCTCTGTCCGAGCCTGGCAAATACAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR TCA 90 bp | ATTTTAACCATCTTTCATAGGGTGTTATCATTGAGATGGATGATGGTCCAGTTACACGCTGTGATCCAGTaGGGCATAGCACATCTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: ILTIFHRVLSLRWMMVQLHAVIQ*GIAHLS Trigger: GCTCAGATGTGCTATGCCTCACTGGATCACAGCGTG...TAACTGGACCATCATCCATCTCAATGATAACACCCTATGAAAGATGGTTAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR-3UTR TCA 90 bp | GAAATAGTCTTCTCCATGGAGTGCTCTCCAATTACACACATTCGTATTTGTCACCAGGGATGCAATCCATaGAGAGAAAGGAAGGTACCA | + |
|
Preference number: 2 (lower is better) Translates to: EIVFSMECSPITHIRICHQGCNP*RERKVP Trigger: TGGTACCTTCCTTTCTCTTCATGGATTGCATCCCTG...GTGACAAATACGAATGTGTGTAATTGGAGAGCACTCCATGGAGAAGACTATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR TCA 90 bp | GTAAAATCATTCCAGGACAAAATACCCATGGAAGGAGTTTCAGAGACAAAGTTTGAGACAGACTTGGGATaGAGCTCAGGATGGAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: VKSFQDKIPMEGVSETKFETDLG*SSGWST Trigger: AGTGCTCCATCCTGAGCTTCATCCCAAGTCTGTCTC...AAACTTTGTCTCTGAAACTCCTTCCATGGGTATTTTGTCCTGGAATGATTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR GCA 90 bp | CTCTGTATTTGCCAGGCTCGGACAGAGCCTCCCAGGAGAACAAACAGAATTTTAAAGTGTTGCTTGTTCTaGTTCTCAAATCTAGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LCICQARTEPPRRTNRILKCCLF*FSNLEG Trigger: TCCTTCTAGATTTGAGAAGCAGAACAAGCAACACTT...TAAAATTCTGTTTGTTCTCCTGGGAGGCTCTGTCCGAGCCTGGCAAATACAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR GCA 90 bp | GTAAAATCATTCCAGGACAAAATACCCATGGAAGGAGTTTCAGAGACAAAGTTTGGAGCTGAAGGGGTTTaGAGTCCCATAGGAGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: VKSFQDKIPMEGVSETKFGAEGV*SPIGGT Trigger: TGTTCCTCCTATGGGACTGCAAACCCCTTCAGCTCC...AAACTTTGTCTCTGAAACTCCTTCCATGGGTATTTTGTCCTGGAATGATTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR GCA 90 bp | GTAAAATCATTCCAGGACAAAATACCCATGGAAGGAGTTTCAGAGACAAAGTTTCAGAGGCTCTGCCAGTaGCTAGCAAATACAGAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: VKSFQDKIPMEGVSETKFQRLCQ*LANTEV Trigger: CACCTCTGTATTTGCTAGGCACTGGCAGAGCCTCTG...AAACTTTGTCTCTGAAACTCCTTCCATGGGTATTTTGTCCTGGAATGATTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR CCA 90 bp | ACTCTGAGGAAGCATACAGGTATCACAAAGGTGCCCAGAGAACTCCTCTGTAGAATTGAGTTAACTGTTTaGGAGACAATGTGGGATAAG | + |
|
Preference number: 2 (lower is better) Translates to: TLRKHTGITKVPRELLCRIELTV*ETMWDK Trigger: CTTATCCCACATTGTCTCCCAAACAGTTAACTCAAT...TCTACAGAGGAGTTCTCTGGGCACCTTTGTGATACCTGTATGCTTCCTCAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR CAA 90 bp | AGTGTAGAGCTGAGTTCCTTGAAAAGAATATGTAGAGGCTCTAGGTaGATGAATGGTGAAGCAGAAAAGAGCCCACTACTGTCCAAACTA | + |
|
Preference number: 2 (lower is better) Translates to: SVELSSLKRICRGSR*MNGEAEKSPLLSKL Trigger: TAGTTTGGACAGTAGTGGGCTCTTTTCTGCTTCACCATTCATCAACCTAGAGCCTCTACATATTCTTTTCAAGGAACTCAGCTCTACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR GCA 90 bp | GTAAAATCATTCCAGGACAAAATACCCATGGAAGGAGTTTCAGAGACAAAGTTTTCTCCTCAGAGGCTCTaGCAGTGCCTAGCAAATACA | + |
|
Preference number: 2 (lower is better) Translates to: VKSFQDKIPMEGVSETKFSPQRL*QCLANT Trigger: TGTATTTGCTAGGCACTGGCAGAGCCTCTGAGGAGA...AAACTTTGTCTCTGAAACTCCTTCCATGGGTATTTTGTCCTGGAATGATTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR CCA 90 bp | GTAAAATCATTCCAGGACAAAATACCCATGGAAGGAGTTTCAGAGACAAAGTTTCTAACAGCCATACATTaGACAAAGCTCAGGGTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: VKSFQDKIPMEGVSETKFLTAIH*TKLRVP Trigger: GGGGACCCTGAGCTTTGTCCAATGTATGGCTGTTAG...AAACTTTGTCTCTGAAACTCCTTCCATGGGTATTTTGTCCTGGAATGATTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR TCA 90 bp | AGCCAGAAAAGTAGAGATAAAAGAATGCTCTGTCCAAGTGTCTCTATCAGAATAACTCTTAGCCCAAGCTaGCCAGGAATTCACTCATTA | + |
|
Preference number: 2 (lower is better) Translates to: SQKSRDKRMLCPSVSIRITLSPS*PGIHSL Trigger: TAATGAGTGAATTCCTGGTCAGCTTGGGCTAAGAGT...TATTCTGATAGAGACACTTGGACAGAGCATTCTTTTATCTCTACTTTTCTGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR CCA 90 bp | GAAATAGTCTTCTCCATGGAGTGCTCTCCAATTACACACATTCGTATTTGTCACGTTTGGGAGACAATGTaGGATAAGCCTTTAGAATCT | + |
|
Preference number: 2 (lower is better) Translates to: EIVFSMECSPITHIRICHVWETM*DKPLES Trigger: AGATTCTAAAGGCTTATCCCACATTGTCTCCCAAAC...GTGACAAATACGAATGTGTGTAATTGGAGAGCACTCCATGGAGAAGACTATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR TCA 90 bp | AGCCAGAAAAGTAGAGATAAAAGAATGCTCTGTCCAAGTGTCTCTATCAGAATAATTCACTCATTAATCTaGGATGGCCTGGAGCTAACA | + |
|
Preference number: 2 (lower is better) Translates to: SQKSRDKRMLCPSVSIRIIHSLI*DGLELT Trigger: TGTTAGCTCCAGGCCATCTCAGATTAATGAGTGAAT...TATTCTGATAGAGACACTTGGACAGAGCATTCTTTTATCTCTACTTTTCTGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR GCA 90 bp | TGTTCAAATAGGGACAAGTGTTGCTTGTTCTGCTTCTCAAATCTAGAAGGATTAAGACCCTGTGTTTGCTaGCCAGAATCATCAAATACA | + |
|
Preference number: 2 (lower is better) Translates to: CSNRDKCCLFCFSNLEGLRPCVC*PESSNT Trigger: TGTATTTGATGATTCTGGGCAGCAAACACAGGGTCT...TAATCCTTCTAGATTTGAGAAGCAGAACAAGCAACACTTGTCCCTATTTGAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR GCA 90 bp | AGCCAGAAAAGTAGAGATAAAAGAATGCTCTGTCCAAGTGTCTCTATCAGAATAGAAAGACCCTGTGTTTaGTGCCCAGAATCATCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SQKSRDKRMLCPSVSIRIERPCV*CPESSN Trigger: ATTTGATGATTCTGGGCAGCAAACACAGGGTCTTTC...TATTCTGATAGAGACACTTGGACAGAGCATTCTTTTATCTCTACTTTTCTGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR CCA 90 bp | GTAAAATCATTCCAGGACAAAATACCCATGGAAGGAGTTTCAGAGACAAAGTTTAACACTACAGGCAACTaGGTAACACTGAAAGATAGA | + |
|
Preference number: 2 (lower is better) Translates to: VKSFQDKIPMEGVSETKFNTTGN*VTLKDR Trigger: TCTATCTTTCAGTGTTACCCAGTTGCCTGTAGTGTT...AAACTTTGTCTCTGAAACTCCTTCCATGGGTATTTTGTCCTGGAATGATTTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR CCA 72 bp | CCACACCCACCTCCCCACCCTGGCATTCCCCTACACTaGGGTATCAAGGCTTTCCAGGACCAAAGGCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PHPPPHPGIPLH*GIKAFQDQRPL Trigger: GAGAGGCCTTTGGTCCTGGAAAGCCTTGATACCCCAGTGTAGGGGAATGCCAGGGTGGGGAGGTGGGTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR CCA 72 bp | CTGGAGCTATGGGTCCCTCCATGTGTACTCTTTGGTTaGTGGTTTAGTCCCTGGGAGCTCTGGCGGGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LELWVPPCVLFG*WFSPWELWRGG Trigger: CCCACCCCGCCAGAGCTCCCAGGGACTAAACCACCAACCAAAGAGTACACATGGAGGGACCCATAGCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR TCA 72 bp | GGGCCTTCTGCGTTTCCCCTTCACGCTGTGATCCAGTaGGGCATAGCACATCTGAGCTTCAGCCGGTACCTG | + |
|
Preference number: 3 (lower is better) Translates to: GPSAFPLHAVIQ*GIAHLSFSRYL Trigger: CAGGTACCGGCTGAAGCTCAGATGTGCTATGCCTCACTGGATCACAGCGTGAAGGGGAAACGCAGAAGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR GCA 72 bp | ATAGCACATCTGAGCTTCAGCCGGTACCTGTGCAGGTaGAGCCACTTCCTGCGGATCGCTTGCAGATCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: IAHLSFSRYLCR*SHFLRIACRSL Trigger: CAGAGATCTGCAAGCGATCCGCAGGAAGTGGCTGCACCTGCACAGGTACCGGCTGAAGCTCAGATGTGCTAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR GCA 72 bp | GTCCAATGGTTGGCTGTGAGCATCTGCCTCTGTATTTaGCAGGCTCGGACAGAGCCTCCCAGGAGAACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VQWLAVSICLCI*QARTEPPRRTN Trigger: GTTTGTTCTCCTGGGAGGCTCTGTCCGAGCCTGGCAAATACAGAGGCAGATGCTCACAGCCAACCATTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR GCA 72 bp | GAGCTAACACAGTTCTCTCTACCTCAGCCTCCTGCATaGTGGGTCACAGCAATACCTCTCCATGCTGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ELTQFSLPQPPA*WVTAIPLHAVL Trigger: CAGCACAGCATGGAGAGGTATTGCTGTGACCCAGCATGCAGGAGGCTGAGGTAGAGAGAACTGTGTTAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR GCA 72 bp | CCTGGAGCTAACACAGTTCTCTCTACCTCAGCCTCCTaGATGCTGGGTCACAGCAATACCTCTCCATGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PGANTVLSTSAS*MLGHSNTSPCC Trigger: ACAGCATGGAGAGGTATTGCTGTGACCCAGCATGCAGGAGGCTGAGGTAGAGAGAACTGTGTTAGCTCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR GCA 72 bp | TACCTGTGCAGGTGCAGCCACTTCCTGCGGATCGCTTaGAGATCTCTGAGGTCGACCTTTCATTTGTTCATA | + |
|
Preference number: 3 (lower is better) Translates to: YLCRCSHFLRIA*RSLRSTFHLFI Trigger: TATGAACAAATGAAAGGTCGACCTCAGAGATCTGCAAGCGATCCGCAGGAAGTGGCTGCACCTGCACAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR GCA 72 bp | CCTCTCCTCCCATTGATGTCTGATAAAGCCACGCTCTaGTACATATGTGACTGGAGCTATGGGTCCCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PLLPLMSDKATL*YICDWSYGSLH Trigger: ATGGAGGGACCCATAGCTCCAGTCACATATGTAGCAGAGCGTGGCTTTATCAGACATCAATGGGAGGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR TCA 72 bp | GCACGGATCAACCCAAACAGTCTAGCGGGATCATCATaGATGCTTTCCTCTACTACCTGGTTATCTGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ARINPNSLAGSS*MLSSTTWLSGG Trigger: CCCACCAGATAACCAGGTAGTAGAGGAAAGCATTCATGATGATCCCGCTAGACTGTTTGGGTTGATCCGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR TCA 72 bp | CATGAAGAGAAAGGAAGGTACCATCCCATTGACAAATaGGCAGACCGTCACCTTGCCAGTCCCTGTGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: HEEKGRYHPIDK*ADRHLASPCVS Trigger: TGACACACAGGGACTGGCAAGGTGACGGTCTGCTCATTTGTCAATGGGATGGTACCTTCCTTTCTCTTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR TCA 72 bp | GGAAGGAGTTTCAGAGACAAAGTTTGGAGCAGAGACTaGAGGAATGGCCATCCAGAGACTGCACTACCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GRSFRDKVWSRD*RNGHPETALPR Trigger: CCTAGGTAGTGCAGTCTCTGGATGGCCATTCCTTCAGTCTCTGCTCCAAACTTTGTCTCTGAAACTCCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR CCA 72 bp | CCCAAGCTGACCAGGAATTCACTCATTAATCTGAGATaGCCTGGAGCTAACACAGTTCTCTCTACCTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PKLTRNSLINLR*PGANTVLSTSA Trigger: GGCTGAGGTAGAGAGAACTGTGTTAGCTCCAGGCCATCTCAGATTAATGAGTGAATTCCTGGTCAGCTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR TCA 72 bp | GGGATGAAGCTCAGGATGGAGCACTCGTCTTTCATCTaGAAGACCCTGTGTTTGCTGCCCAGAATCATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GMKLRMEHSSFI*KTLCLLPRIIK Trigger: TTTGATGATTCTGGGCAGCAAACACAGGGTCTTTCAGATGAAAGACGAGTGCTCCATCCTGAGCTTCATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTGAGGAAGCATACAGGTATCACAAAGGTGCCCAGAGAACTCCTCTGTAGACATAGGGTGTTATCATaGAGATGGATGATGGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TLRKHTGITKVPRELLCRHRVLS*RWMMVQ Trigger: CTGGACCATCATCCATCTCAATGATAACACCCTATG...TCTACAGAGGAGTTCTCTGGGCACCTTTGTGATACCTGTATGCTTCCTCAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTGAGGAAGCATACAGGTATCACAAAGGTGCCCAGAGAACTCCTCTGTAGATGTAGAGGCTCTAGGTaGATGAATGGTGAAGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TLRKHTGITKVPRELLCRCRGSR*MNGEAE Trigger: TTCTGCTTCACCATTCATCAACCTAGAGCCTCTACA...TCTACAGAGGAGTTCTCTGGGCACCTTTGTGATACCTGTATGCTTCCTCAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCTAGCGGGATCATCATGAATGCTTTCCTCTACTACCTGGTTATCTGGTGGAGGTCGACCTTTCATTaGTTCATAGCAGTTCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: QSSGIIMNAFLYYLVIWWRSTFH*FIAVLI Trigger: GATGAGAACTGCTATGAACAAATGAAAGGTCGACCT...CCACCAGATAACCAGGTAGTAGAGGAAAGCATTCATGATGATCCCGCTAGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTGAGGAAGCATACAGGTATCACAAAGGTGCCCAGAGAACTCCTCTGTAGAGCAGACATCAGAATTTaGAGACAGACTTGGGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: TLRKHTGITKVPRELLCRADIRI*RQTWDE Trigger: TTCATCCCAAGTCTGTCTCAAAATTCTGATGTCTGC...TCTACAGAGGAGTTCTCTGGGCACCTTTGTGATACCTGTATGCTTCCTCAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR CAA 90 bp | TTAGATGGCATCTCTGTGTCCCAGAAAGGAACTGTACAGATCGTTCAAAGAAGCAGAAAGCAAGAGGGGTaGTATGAAGAGGTTTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LDGISVSQKGTVQIVQRSRKQEG*YEEVWG Trigger: TCCCCAAACCTCTTCATACAACCCCTCTTGCTTTCT...GCTTCTTTGAACGATCTGTACAGTTCCTTTCTGGGACACAGAGATGCCATCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR TCA 72 bp | CAATGCAGACATCAGAATTTTGAGACAGACTTGGGATaGAGCTCAGGATGGAGCACTCGTCTTTCATCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QCRHQNFETDLG*SSGWSTRLSSE Trigger: TTCAGATGAAAGACGAGTGCTCCATCCTGAGCTTCATCCCAAGTCTGTCTCAAAATTCTGATGTCTGCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR CCA 72 bp | AGATACAATGCAGACATCAGAATTTTGAGACAGACTTaGGATGAAGCTCAGGATGGAGCACTCGTCTTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: RYNADIRILRQT*DEAQDGALVFH Trigger: ATGAAAGACGAGTGCTCCATCCTGAGCTTCATCCCAAGTCTGTCTCAAAATTCTGATGTCTGCATTGTATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR-3UTR CAA 90 bp | TTAGATGGCATCTCTGTGTCCCAGAAAGGAACTGTACAGATCGTTCAAAGAAGCCTACTTTTGGTCCAATaGTTGACCTTTCAGAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: LDGISVSQKGTVQIVQRSLLLVQ*LTFQRS Trigger: AGATCTCTGAAAGGTCAACAATTGGACCAAAAGTAG...GCTTCTTTGAACGATCTGTACAGTTCCTTTCTGGGACACAGAGATGCCATCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR TCA 72 bp | GGTACCAGACAGAACCCTGCGTGGGTACAAAGAACATaGGAATGTCTAGACAGTCTTATTACATGGAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: GTRQNPAWVQRT*ECLDSLITWKI Trigger: AATTTTCCATGTAATAAGACTGTCTAGACATTCTCATGTTCTTTGTACCCACGCAGGGTTCTGTCTGGTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR CCA 72 bp | CTGAGGTTTATTGAGTTAACTGTTTGGGAGACAATGTaGGATAAGCCTTTAGAATCTAAGGGGTATGCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: LRFIELTVWETM*DKPLESKGYAY Trigger: GTAGGCATACCCCTTAGATTCTAAAGGCTTATCCCACATTGTCTCCCAAACAGTTAACTCAATAAACCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR CCA 72 bp | CTCCATGCTGTGCTGAGGTTTATTGAGTTAACTGTTTaGGAGACAATGTGGGATAAGCCTTTAGAATCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LHAVLRFIELTV*ETMWDKPLESK Trigger: CTTAGATTCTAAAGGCTTATCCCACATTGTCTCCCAAACAGTTAACTCAATAAACCTCAGCACAGCATGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR TCA 72 bp | GAAAAGATATTCAACCTGTTTCAATTCCAGAAGCTTTaGTTCAGTAAGGGTGTCAGCAGGTTTTTAGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: EKIFNLFQFQKL*FSKGVSRFLDG Trigger: GCCATCTAAAAACCTGCTGACACCCTTACTGAATCAAAGCTTCTGGAATTGAAACAGGTTGAATATCTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR CCA 72 bp | ATCATGAATGCTTTCCTCTACTACCTGGTTATCTGGTaGGAAACTTTCTACCATATTGATCTGAGAAACGTT | + |
|
Preference number: 3 (lower is better) Translates to: IMNAFLYYLVIW*ETFYHIDLRNV Trigger: AACGTTTCTCAGATCAATATGGTAGAAAGTTTCCCACCAGATAACCAGGTAGTAGAGGAAAGCATTCATGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR CCA 72 bp | ATTTTAACCATCTTTCATAGGGTGTTATCATTGAGATaGATGATGGTCCAGTTAGATTACAGGCTCTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ILTIFHRVLSLR*MMVQLDYRLSL Trigger: AAGAGAGAGCCTGTAATCTAACTGGACCATCATCCATCTCAATGATAACACCCTATGAAAGATGGTTAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR CAA 72 bp | TGTGACTGGAGCTATGGGTCCCTCCATGTGTACTCTTaGGTTGGTGGTTTAGTCCCTGGGAGCTCTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CDWSYGSLHVYS*VGGLVPGSSGG Trigger: CCCGCCAGAGCTCCCAGGGACTAAACCACCAACCAAAGAGTACACATGGAGGGACCCATAGCTCCAGTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR CAA 72 bp | GTACCTGTGCAGGTGCAGCCACTTCCTGCGGATCGCTaGCAGATCTCTGAGGTCGACCTTTCATTTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VPVQVQPLPADR*QISEVDLSFVH Trigger: ATGAACAAATGAAAGGTCGACCTCAGAGATCTGCAAGCGATCCGCAGGAAGTGGCTGCACCTGCACAGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| CDS-3UTR GCA 90 bp | TTTCAGAGACAAAGTTTGGAGCAGAGACTGAAGGAATGGCCATCCAGAGACTGCGTTTCCTGGGCCTTCTaGGTTTCCCCTTCACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FQRQSLEQRLKEWPSRDCVSWAF*VSPSRC Trigger: ACAGCGTGAAGGGGAAACGCAGAAGGCCCAGGAAAC...GCAGTCTCTGGATGGCCATTCCTTCAGTCTCTGCTCCAAACTTTGTCTCTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR CAA 72 bp | CCTTCAACTCCTTTGGTCCTTTCTCTAACTCCTCCATaGGTGACTGTGCTCAGTCCAATGGTTGGCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSTPLVLSLTPP*VTVLSPMVGCE Trigger: CTCACAGCCAACCATTGGACTGAGCACAGTCACCAATGGAGGAGTTAGAGAAAGGACCAAAGGAGTTGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| CDS-3UTR GCA 90 bp | GGGATTTTAACCATCTTTCATAGGGTGTTATCATTGAGATGGATGATGGTCCAGCGGTACCTGTGCAGGTaGAGCCACTTCCTGCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: GILTIFHRVLSLRWMMVQRYLCR*SHFLRI Trigger: GATCCGCAGGAAGTGGCTGCACCTGCACAGGTACCG...CTGGACCATCATCCATCTCAATGATAACACCCTATGAAAGATGGTTAAAATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231701.3 ENSMUST00000239408.2 |
||
| CDS-3UTR GCA 90 bp | CAGTACCCCCTTAGCTCCCTGGGACTAAACCACCAACCACAGAAAACACTTGGTCGGGATCATCATGAATaGTTTCCTCTACTACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QYPLSSLGLNHQPQKTLGRDHHE*FPLLPG Trigger: ACCAGGTAGTAGAGGAAAGCATTCATGATGATCCCG...ACCAAGTGTTTTCTGTGGTTGGTGGTTTAGTCCCAGGGAGCTAAGGGGGTACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| 3UTR CAA 72 bp | CGGATCGCTTGCAGATCTCTGAGGTCGACCTTTCATTaGTTCATAGCAGTTCTCATCCAGTGGTTCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RIACRSLRSTFH*FIAVLIQWFWD Trigger: ATCCCAGAACCACTGGATGAGAACTGCTATGAACAAATGAAAGGTCGACCTCAGAGATCTGCAAGCGATCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170861.4 |
||
| 3UTR CAA 72 bp | GTTCTTCCTATGGGGTTGCAAACCCCTTCAACTCCTTaGGTCCTTTCTCTAACTCCTCCATTGGTGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLPMGLQTPSTP*VLSLTPPLVTV Trigger: CACAGTCACCAATGGAGGAGTTAGAGAAAGGACCAAAGGAGTTGAAGGGGTTTGCAACCCCATAGGAAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| CDS-3UTR CCA 90 bp | ACCGTCACCTTGCCAGTCCCTGTGTGTCACATGAGGGATTTTAACCATCTTTCATTACAGGCTCTCTCTTaGCACGGATCAACCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TVTLPVPVCHMRDFNHLSLQALS*HGSTQT Trigger: TGTTTGGGTTGATCCGTGCCAAGAGAGAGCCTGTAA...TGAAAGATGGTTAAAATCCCTCATGTGACACACAGGGACTGGCAAGGTGACGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| CDS-3UTR TCA 90 bp | GAAATAGTCTTCTCCATGGAGTGCTCTCCAATTACACACATTCGTATTTGTCACCACGCTGTGATCCAGTaGGGCATAGCACATCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EIVFSMECSPITHIRICHHAVIQ*GIAHLS Trigger: GCTCAGATGTGCTATGCCTCACTGGATCACAGCGTG...GTGACAAATACGAATGTGTGTAATTGGAGAGCACTCCATGGAGAAGACTATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| CDS-3UTR TCA 90 bp | GGGATTTTAACCATCTTTCATAGGGTGTTATCATTGAGATGGATGATGGTCCAGCACGCTGTGATCCAGTaGGGCATAGCACATCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GILTIFHRVLSLRWMMVQHAVIQ*GIAHLS Trigger: GCTCAGATGTGCTATGCCTCACTGGATCACAGCGTG...CTGGACCATCATCCATCTCAATGATAACACCCTATGAAAGATGGTTAAAATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231701.3 ENSMUST00000239408.2 |
||
| CDS-3UTR GCA 90 bp | GGGATTTTAACCATCTTTCATAGGGTGTTATCATTGAGATGGATGATGGTCCAGGTTTCCTGGGCCTTCTaGGTTTCCCCTTCACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GILTIFHRVLSLRWMMVQVSWAF*VSPSRC Trigger: ACAGCGTGAAGGGGAAACGCAGAAGGCCCAGGAAAC...CTGGACCATCATCCATCTCAATGATAACACCCTATGAAAGATGGTTAAAATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000231701.3 ENSMUST00000239408.2 |
||
| CDS-3UTR CCA 90 bp | GGGTACCAGACAGAACCCTGCGTGGGTACAAAGAACATGAGAATGTCTAGACAGGCAGTTCTCATCCAGTaGTTCTGGGATTATATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GYQTEPCVGTKNMRMSRQAVLIQ*FWDYIF Trigger: GAAAATATAATCCCAGAACCACTGGATGAGAACTGC...CTGTCTAGACATTCTCATGTTCTTTGTACCCACGCAGGGTTCTGTCTGGTACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| CDS-3UTR CCA 90 bp | TTTCAGAGACAAAGTTTGGAGCAGAGACTGAAGGAATGGCCATCCAGAGACTGCTACTACCTGGTTATCTaGTGGGAAACTTTCTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: FQRQSLEQRLKEWPSRDCYYLVI*WETFYH Trigger: ATGGTAGAAAGTTTCCCACCAGATAACCAGGTAGTA...GCAGTCTCTGGATGGCCATTCCTTCAGTCTCTGCTCCAAACTTTGTCTCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| CDS-3UTR TCA 90 bp | TCCTTTGGTCCTTTCTCTAACTCCTCCATTGGTGACTGTGCTCAGTCCAATGGTATCCTTTCCTCTGTCTaGCACATTAGTATTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFGPFSNSSIGDCAQSNGILSSV*HISILF Trigger: AAACAGAATACTAATGTGTCAGACAGAGGAAAGGAT...ACCATTGGACTGAGCACAGTCACCAATGGAGGAGTTAGAGAAAGGACCAAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| CDS-3UTR CCA 90 bp | GGGATTTTAACCATCTTTCATAGGGTGTTATCATTGAGATGGATGATGGTCCAGTTACAGGCTCTCTCTTaGCACGGATCAACCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: GILTIFHRVLSLRWMMVQLQALS*HGSTQT Trigger: TGTTTGGGTTGATCCGTGCCAAGAGAGAGCCTGTAA...CTGGACCATCATCCATCTCAATGATAACACCCTATGAAAGATGGTTAAAATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231701.3 ENSMUST00000239408.2 |
||
| 3UTR CAA 72 bp | CTGAGTTCCTTGAAAAGAATATGTAGAGGCTCTAGGTaGATGAATGGTGAAGCAGAAAAGAGCCCACTACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSLKRICRGSR*MNGEAEKSPLL Trigger: CAGTAGTGGGCTCTTTTCTGCTTCACCATTCATCAACCTAGAGCCTCTACATATTCTTTTCAAGGAACTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| CDS-3UTR GCA 90 bp | GGGATTTTAACCATCTTTCATAGGGTGTTATCATTGAGATGGATGATGGTCCAGCGGGATCATCATGAATaGTTTCCTCTACTACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GILTIFHRVLSLRWMMVQRDHHE*FPLLPG Trigger: ACCAGGTAGTAGAGGAAAGCATTCATGATGATCCCG...CTGGACCATCATCCATCTCAATGATAACACCCTATGAAAGATGGTTAAAATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231701.3 ENSMUST00000239408.2 |
||
| CDS-3UTR TCA 90 bp | GGGATTTTAACCATCTTTCATAGGGTGTTATCATTGAGATGGATGATGGTCCAGTCTACCATATTGATCTaGGAAACGTTGGCATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: GILTIFHRVLSLRWMMVQSTILI*ETLASI Trigger: AATGGATGCCAACGTTTCTCAGATCAATATGGTAGA...CTGGACCATCATCCATCTCAATGATAACACCCTATGAAAGATGGTTAAAATCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231701.3 ENSMUST00000239408.2 |
||
| CDS-3UTR CCA 90 bp | GGGATTTTAACCATCTTTCATAGGGTGTTATCATTGAGATGGATGATGGTCCAGGCAGTTCTCATCCAGTaGTTCTGGGATTATATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GILTIFHRVLSLRWMMVQAVLIQ*FWDYIF Trigger: GAAAATATAATCCCAGAACCACTGGATGAGAACTGC...CTGGACCATCATCCATCTCAATGATAACACCCTATGAAAGATGGTTAAAATCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000231701.3 ENSMUST00000239408.2 |
||
| CDS-3UTR TCA 90 bp | GGGATTTTAACCATCTTTCATAGGGTGTTATCATTGAGATGGATGATGGTCCAGATCCTTTCCTCTGTCTaGCACATTAGTATTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GILTIFHRVLSLRWMMVQILSSV*HISILF Trigger: AAACAGAATACTAATGTGTCAGACAGAGGAAAGGAT...CTGGACCATCATCCATCTCAATGATAACACCCTATGAAAGATGGTTAAAATCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231701.3 ENSMUST00000239408.2 |
||
| CDS-3UTR TCA 90 bp | GGGATTTTAACCATCTTTCATAGGGTGTTATCATTGAGATGGATGATGGTCCAGAACTTTCTACCATATTaGTCTGAGAAACGTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GILTIFHRVLSLRWMMVQNFLPY*SEKRWH Trigger: ATGCCAACGTTTCTCAGATCAATATGGTAGAAAGTT...CTGGACCATCATCCATCTCAATGATAACACCCTATGAAAGATGGTTAAAATCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231701.3 ENSMUST00000239408.2 |
||
| CDS-3UTR CCA 90 bp | GGGATTTTAACCATCTTTCATAGGGTGTTATCATTGAGATGGATGATGGTCCAGTACCTGGTTATCTGGTaGGAAACTTTCTACCATATT | + |
|
Preference number: 4 (lower is better) Translates to: GILTIFHRVLSLRWMMVQYLVIW*ETFYHI Trigger: AATATGGTAGAAAGTTTCCCACCAGATAACCAGGTA...CTGGACCATCATCCATCTCAATGATAACACCCTATGAAAGATGGTTAAAATCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231701.3 ENSMUST00000239408.2 |
||
| 3UTR CAA 72 bp | AGAGATGCTAAACACATTAGTGTAGAGCTGAGTTCCTaGAAAAGAATATGTAGAGGCTCTAGGTTGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RDAKHISVELSS*KRICRGSRLMN Trigger: ATTCATCAACCTAGAGCCTCTACATATTCTTTTCAAGGAACTCAGCTCTACACTAATGTGTTTAGCATCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| CDS-3UTR TCA 90 bp | TGTTCAAATAGGGACAAGTGTTGCTTGTTCTGCTTCTCAAATCTAGAAGGATTAAACTTTCTACCATATTaGTCTGAGAAACGTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CSNRDKCCLFCFSNLEGLNFLPY*SEKRWH Trigger: ATGCCAACGTTTCTCAGATCAATATGGTAGAAAGTT...TAATCCTTCTAGATTTGAGAAGCAGAACAAGCAACACTTGTCCCTATTTGAACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| CDS-3UTR CCA 90 bp | GTAAAATCATTCCAGGACAAAATACCCATGGAAGGAGTTTCAGAGACAAAGTTTTACCTGGTTATCTGGTaGGAAACTTTCTACCATATT | + |
|
Preference number: 4 (lower is better) Translates to: VKSFQDKIPMEGVSETKFYLVIW*ETFYHI Trigger: AATATGGTAGAAAGTTTCCCACCAGATAACCAGGTA...AAACTTTGTCTCTGAAACTCCTTCCATGGGTATTTTGTCCTGGAATGATTTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| CDS-3UTR CAA 90 bp | TTAGATGGCATCTCTGTGTCCCAGAAAGGAACTGTACAGATCGTTCAAAGAAGCATCCATTGTATAGACTaGTGTATCCTTTCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LDGISVSQKGTVQIVQRSIHCID*CILSSV Trigger: GACAGAGGAAAGGATACACAAGTCTATACAATGGAT...GCTTCTTTGAACGATCTGTACAGTTCCTTTCTGGGACACAGAGATGCCATCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| CDS-3UTR CAA 90 bp | AGCCAGAAAAGTAGAGATAAAAGAATGCTCTGTCCAAGTGTCTCTATCAGAATAATTACAGGCTCTCTCTaGGCACGGATCAACCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SQKSRDKRMLCPSVSIRIITGSL*ARINPN Trigger: GTTTGGGTTGATCCGTGCCAAGAGAGAGCCTGTAAT...TATTCTGATAGAGACACTTGGACAGAGCATTCTTTTATCTCTACTTTTCTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||
| CDS-3UTR CAA 90 bp | GGGATTTTAACCATCTTTCATAGGGTGTTATCATTGAGATGGATGATGGTCCAGAGGTCGACCTTTCATTaGTTCATAGCAGTTCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: GILTIFHRVLSLRWMMVQRSTFH*FIAVLI Trigger: GATGAGAACTGCTATGAACAAATGAAAGGTCGACCT...CTGGACCATCATCCATCTCAATGATAACACCCTATGAAAGATGGTTAAAATCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231701.3 ENSMUST00000239408.2 |
||
| CDS-3UTR CAA 90 bp | GGGATTTTAACCATCTTTCATAGGGTGTTATCATTGAGATGGATGATGGTCCAGATCCATTGTATAGACTaGTGTATCCTTTCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GILTIFHRVLSLRWMMVQIHCID*CILSSV Trigger: GACAGAGGAAAGGATACACAAGTCTATACAATGGAT...CTGGACCATCATCCATCTCAATGATAACACCCTATGAAAGATGGTTAAAATCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231701.3 ENSMUST00000239408.2 |
||
| CDS-3UTR CAA 90 bp | TGTTCAAATAGGGACAAGTGTTGCTTGTTCTGCTTCTCAAATCTAGAAGGATTAAGGTCGACCTTTCATTaGTTCATAGCAGTTCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: CSNRDKCCLFCFSNLEGLRSTFH*FIAVLI Trigger: GATGAGAACTGCTATGAACAAATGAAAGGTCGACCT...TAATCCTTCTAGATTTGAGAAGCAGAACAAGCAACACTTGTCCCTATTTGAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231701.3 |
||