Pregenerated sensors for TRAPPC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040236Ensembl transcript IDs: ENSMUST00000044857.4, ENSMUST00000207787.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGATGGTTCTGGGCTCTTCCCCCTTTGAGAGGCTGGTGTGCCACTaGTCTCGGTGTGATCCCTGGGGCACCCAGCAGCTCTCCAGAATG | + |
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Preference number: 1 (lower is better) Translates to: QMVLGSSPFERLVCH*SRCDPWGTQQLSRM Trigger: CATTCTGGAGAGCTGCTGGGTGCCCCAGGGATCACACCGAGACCAGTGGCACACCAGCCTCTCAAAGGGGGAAGAGCCCAGAACCATCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR GCA 90 bp | CCAGAAGCCAAGTCGGCCATTGCCCACTTCCTTACTCTCCATCTATaGCTGACAAGCTTGCCTTCAGACTCCCTTAGTCTGGGACTCAGG | + |
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Preference number: 1 (lower is better) Translates to: PEAKSAIAHFLTLHL*LTSLPSDSLSLGLR Trigger: CCTGAGTCCCAGACTAAGGGAGTCTGAAGGCAAGCTTGTCAGGCATAGATGGAGAGTAAGGAAGTGGGCAATGGCCGACTTGGCTTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR CCA 90 bp | TCCCCCTTTGAGAGGCTGGTGTGCCACTGGTCTCGGTGTGATCCCTaGGGCACCCAGCAGCTCTCCAGAATGTACCAAAAACAAATTCTT | + |
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Preference number: 1 (lower is better) Translates to: SPFERLVCHWSRCDP*GTQQLSRMYQKQIL Trigger: AAGAATTTGTTTTTGGTACATTCTGGAGAGCTGCTGGGTGCCCCAGGGATCACACCGAGACCAGTGGCACACCAGCCTCTCAAAGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR CAA 90 bp | TCGGCCATTGCCCACTTCCTTACTCTCCATCTATGCCTGACAAGCTaGCCTTCAGACTCCCTTAGTCTGGGACTCAGGACCAGGATCAGG | + |
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Preference number: 2 (lower is better) Translates to: SAIAHFLTLHLCLTS*PSDSLSLGLRTRIR Trigger: CCTGATCCTGGTCCTGAGTCCCAGACTAAGGGAGTCTGAAGGCAAGCTTGTCAGGCATAGATGGAGAGTAAGGAAGTGGGCAATGGCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGTTTCCAGATGGTTCTGGGCTCTTCCCCCTTTGAGAGGCTGGTGTGCCACTGTTCTGAAACCAGCTaGGTTTCTTGGTCCCTCGGG | + |
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Preference number: 2 (lower is better) Translates to: SSFQMVLGSSPFERLVCHCSETS*VSWSLG Trigger: CCCGAGGGACCAAGAAACTCAGCTGGTTTCAGAACA...GTGGCACACCAGCCTCTCAAAGGGGGAAGAGCCCAGAACCATCTGGAAACTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR CAA 90 bp | TGGACCAGTGATCCTGCATGTGGGACGAGGATGGTGACGTTGGTGTaGCTGCTGGTAGTGATAATGCTGATACTGATGCTGACAGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: WTSDPACGTRMVTLV*LLVVIMLILMLTVH Trigger: GTGGACTGTCAGCATCAGTATCAGCATTATCACTACCAGCAGCAACACCAACGTCACCATCCTCGTCCCACATGCAGGATCACTGGTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGTTTCCAGATGGTTCTGGGCTCTTCCCCCTTTGAGAGGCTGGTGTGCCACAGCAGAGGATGGCCTTaGACTTACCATCTTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: SSFQMVLGSSPFERLVCHSRGWP*TYHLSL Trigger: GAGAGAAAGATGGTAAGTTCAAGGCCATCCTCTGCT...GTGGCACACCAGCCTCTCAAAGGGGGAAGAGCCCAGAACCATCTGGAAACTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCAACCTCATGCAGAGTCAGAAGGGTTGGGATTCACAGTCACCCTTAAATATGGGCTCTTCCCCCTTTaGGAGGCTGGTGTGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: TQPHAESEGLGFTVTLKYGLFPL*EAGVPL Trigger: CAGTGGCACACCAGCCTCTCAAAGGGGGAAGAGCCC...ATATTTAAGGGTGACTGTGAATCCCAACCCTTCTGACTCTGCATGAGGTTGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAAGCCAAGTCGGCCATTGCCCACTTCCTTACTCTCCATCTATGCCTGACACTTGGGAACAGGATCTaGTCGTCCTTTATCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: PEAKSAIAHFLTLHLCLTLGNRI*SSFISC Trigger: ACAGGAGATAAAGGACGAGCAGATCCTGTTCCCAAG...TGTCAGGCATAGATGGAGAGTAAGGAAGTGGGCAATGGCCGACTTGGCTTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGAAAGGGGCTGGAATACACACTTCTGGTCCAGGAGGTATAGGGGTGGACCTTGGGAACAGGATCTaGTCGTCCTTTATCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: SEKGAGIHTSGPGGIGVDLGNRI*SSFISC Trigger: ACAGGAGATAAAGGACGAGCAGATCCTGTTCCCAAG...GTCCACCCCTATACCTCCTGGACCAGAAGTGTGTATTCCAGCCCCTTTCTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTGTCAGATGGCAACCCTCATACCAGATGGCTCACAGCTACCTACAAAAGCTAGCAGAGGATGGCCTTaGACTTACCATCTTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: GCQMATLIPDGSQLPTKASRGWP*TYHLSL Trigger: GAGAGAAAGATGGTAAGTTCAAGGCCATCCTCTGCT...AGCTTTTGTAGGTAGCTGTGAGCCATCTGGTATGAGGGTTGCCATCTGACACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044857.4 |
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| 3UTR-3UTR TCA 90 bp | CCGGAACCCTGTCTCAGAACAAACTTTGTAAATATTAACCTTAAAACCCTCAAGCCACTGGTCTCGGTGTaGTCCCTGGGGCACCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PEPCLRTNFVNINLKTLKPLVSV*SLGHPA Trigger: TGCTGGGTGCCCCAGGGATCACACCGAGACCAGTGG...CTTGAGGGTTTTAAGGTTAATATTTACAAAGTTTGTTCTGAGACAGGGTTCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCTTAACCTCATATCCCCGCCCTCACCTCTCCAGACTGCAGGTTCCAACAATCTTACTCTCCATCTATaGCTGACAAGCTTGCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: PLNLISPPSPLQTAGSNNLTLHL*LTSLPS Trigger: TGAAGGCAAGCTTGTCAGGCATAGATGGAGAGTAAG...ATTGTTGGAACCTGCAGTCTGGAGAGGTGAGGGCGGGGATATGAGGTTAAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR-3UTR TCA 90 bp | CAACCTCATGCAGAGTCAGAAGGGTTGGGATTCACAGTCACCCTTAAATATACATCCCAGGGAGACCTCTaGGAAAGGGGCTGGAATACA | + |
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Preference number: 2 (lower is better) Translates to: QPHAESEGLGFTVTLKYTSQGDL*ERGWNT Trigger: TGTATTCCAGCCCCTTTCTCAGAGGTCTCCCTGGGA...TGTATATTTAAGGGTGACTGTGAATCCCAACCCTTCTGACTCTGCATGAGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCCTGAAATAAGAGTCCCAGGGAGACCTCTGAGAAAGGGGCTGGAATACACACTTACTCTCCATCTATaGCTGACAAGCTTGCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: CPEIRVPGRPLRKGLEYTLTLHL*LTSLPS Trigger: TGAAGGCAAGCTTGTCAGGCATAGATGGAGAGTAAG...TGTGTATTCCAGCCCCTTTCTCAGAGGTCTCCCTGGGACTCTTATTTCAGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR-3UTR CCA 90 bp | AACACTCAACCTCATGCAGAGTCAGAAGGGTTGGGATTCACAGTCACCCTTAAACAGACTCCCTTAGTCTaGGACTCAGGACCAGGATCA | + |
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Preference number: 2 (lower is better) Translates to: NTQPHAESEGLGFTVTLKQTPLV*DSGPGS Trigger: TGATCCTGGTCCTGAGTCCCAGACTAAGGGAGTCTG...TTTAAGGGTGACTGTGAATCCCAACCCTTCTGACTCTGCATGAGGTTGAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR-3UTR CCA 90 bp | CAACCTCATGCAGAGTCAGAAGGGTTGGGATTCACAGTCACCCTTAAATATACACAGACTCCCTTAGTCTaGGACTCAGGACCAGGATCA | + |
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Preference number: 2 (lower is better) Translates to: QPHAESEGLGFTVTLKYTQTPLV*DSGPGS Trigger: TGATCCTGGTCCTGAGTCCCAGACTAAGGGAGTCTG...TGTATATTTAAGGGTGACTGTGAATCCCAACCCTTCTGACTCTGCATGAGGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGAAAGGGGCTGGAATACACACTTCTGGTCCAGGAGGTATAGGGGTGGACTGTACCCACTTTATGTaGCATAAGGAATCAAACCCA | + |
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Preference number: 2 (lower is better) Translates to: SEKGAGIHTSGPGGIGVDCTHFM*HKESNP Trigger: TGGGTTTGATTCCTTATGCCACATAAAGTGGGTACA...GTCCACCCCTATACCTCCTGGACCAGAAGTGTGTATTCCAGCCCCTTTCTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGACATCTCACATCAATCTCTGGCTCTACATGCACACACAAAATAAACATTGTTTCCAGATGGTTCTaGGCTCTTCCCCCTTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: GRHLTSISGSTCTHKINIVSRWF*ALPPLR Trigger: TCTCAAAGGGGGAAGAGCCCAGAACCATCTGGAAAC...AATGTTTATTTTGTGTGTGCATGTAGAGCCAGAGATTGATGTGAGATGTCTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044857.4 |
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| 3UTR-3UTR GCA 90 bp | GGAAGACATCTCACATCAATCTCTGGCTCTACATGCACACACAAAATAAACATTCAGTTAACAGCACACTaGTCTTTCTTAGGATGGGGG | + |
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Preference number: 2 (lower is better) Translates to: GRHLTSISGSTCTHKINIQLTAH*SFLGWG Trigger: CCCCCATCCTAAGAAAGAGCAGTGTGCTGTTAACTG...AATGTTTATTTTGTGTGTGCATGTAGAGCCAGAGATTGATGTGAGATGTCTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044857.4 |
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| 3UTR-3UTR TCA 90 bp | CCGGAACCCTGTCTCAGAACAAACTTTGTAAATATTAACCTTAAAACCCTCAAGAGTTCTGTTCTGTTCTaGAACCAGCTGAGTTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: PEPCLRTNFVNINLKTLKSSVLF*NQLSFL Trigger: CAAGAAACTCAGCTGGTTTCAGAACAGAACAGAACT...CTTGAGGGTTTTAAGGTTAATATTTACAAAGTTTGTTCTGAGACAGGGTTCCGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAGACATCTCACATCAATCTCTGGCTCTACATGCACACACAAAATAAACATTAAAAACAAATTCTTATaGACACCCCAAACCTACAGA | + |
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Preference number: 2 (lower is better) Translates to: GRHLTSISGSTCTHKINIKNKFL*TPQTYR Trigger: TCTGTAGGTTTGGGGTGTGCATAAGAATTTGTTTTT...AATGTTTATTTTGTGTGTGCATGTAGAGCCAGAGATTGATGTGAGATGTCTTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044857.4 |
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| 3UTR CCA 72 bp | TCCAGATGGTTCTGGGCTCTTCCCCCTTTGAGAGGCTaGTGTGCCACTGGTCTCGGTGTGATCCCTGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: SRWFWALPPLRG*CATGLGVIPGA Trigger: TGCCCCAGGGATCACACCGAGACCAGTGGCACACCAGCCTCTCAAAGGGGGAAGAGCCCAGAACCATCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR CCA 72 bp | GAGAGGCTGGTGTGCCACTGGTCTCGGTGTGATCCCTaGGGCACCCAGCAGCTCTCCAGAATGTACCAAAAA | + |
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Preference number: 3 (lower is better) Translates to: ERLVCHWSRCDP*GTQQLSRMYQK Trigger: TTTTTGGTACATTCTGGAGAGCTGCTGGGTGCCCCAGGGATCACACCGAGACCAGTGGCACACCAGCCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR TCA 72 bp | CTGAGTTTCTTGGTCCCTCGGGTGACTCTGATGCCCTaGAATAAGAGTCCCAGGGAGACCTCTGAGAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: LSFLVPRVTLMP*NKSPRETSEKG Trigger: CCCTTTCTCAGAGGTCTCCCTGGGACTCTTATTTCAGGGCATCAGAGTCACCCGAGGGACCAAGAAACTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR CCA 72 bp | GTCACCCTTAAATATACAGCAAGGCTGAAGCCAGCCTaGGCGGCCGGAACCCTGTCTCAGAACAAACTTTGT | + |
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Preference number: 3 (lower is better) Translates to: VTLKYTARLKPA*AAGTLSQNKLC Trigger: ACAAAGTTTGTTCTGAGACAGGGTTCCGGCCGCCCAGGCTGGCTTCAGCCTTGCTGTATATTTAAGGGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR GCA 72 bp | AAGTCGGCCATTGCCCACTTCCTTACTCTCCATCTATaGCTGACAAGCTTGCCTTCAGACTCCCTTAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: KSAIAHFLTLHL*LTSLPSDSLSL Trigger: CAGACTAAGGGAGTCTGAAGGCAAGCTTGTCAGGCATAGATGGAGAGTAAGGAAGTGGGCAATGGCCGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| 3UTR CCA 72 bp | AGATCTGACGCCCCTACACAAGACACAACACAAGCTTaGGAACAGGATCTGCTCGTCCTTTATCTCCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: RSDAPTQDTTQA*EQDLLVLYLLW Trigger: CCACAGGAGATAAAGGACGAGCAGATCCTGTTCCCAAGCTTGTGTTGTGTCTTGTGTAGGGGCGTCAGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS-3UTR CCA 90 bp | GGCTGGTGTGCCACTGGTCTCGGTGTGATCCCTGGGGCACCCAGCAGCTCTCCATGCGGGCGTCATCATTaGCCTGCTCCAGCTTGTCCG | + |
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Preference number: 4 (lower is better) Translates to: GWCATGLGVIPGAPSSSPCGRHH*PAPACP Trigger: CGGACAAGCTGGAGCAGGCCAATGATGACGCCCGCA...TGGAGAGCTGCTGGGTGCCCCAGGGATCACACCGAGACCAGTGGCACACCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS-3UTR GCA 90 bp | TCAAGTTTCCAGATGGTTCTGGGCTCTTCCCCCTTTGAGAGGCTGGTGTGCCACTCAGGCTCACCTCGGTaGGGGGCCGCACCAGTGCGC | + |
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Preference number: 4 (lower is better) Translates to: SSFQMVLGSSPFERLVCHSGSPR*GAAPVR Trigger: GCGCACTGGTGCGGCCCCGCACCGAGGTGAGCCTGA...GTGGCACACCAGCCTCTCAAAGGGGGAAGAGCCCAGAACCATCTGGAAACTTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS-3UTR TCA 90 bp | AGGTCCCGGTCCCTCTTAACCTCATATCCCCGCCCTCACCTCTCCAGACTGCAGCCACGATGCCCGCTGTaGAGCTGGCACAGTTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RSRSLLTSYPRPHLSRLQPRCPL*SWHSSV Trigger: CACTGAACTGTGCCAGCTTCACAGCGGGCATCGTGG...CTGCAGTCTGGAGAGGTGAGGGCGGGGATATGAGGTTAAGAGGGACCGGGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS-3UTR GCA 90 bp | TCTGAGAAAGGGGCTGGAATACACACTTCTGGTCCAGGAGGTATAGGGGTGGACTCAGGCTCACCTCGGTaGGGGGCCGCACCAGTGCGC | + |
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Preference number: 4 (lower is better) Translates to: SEKGAGIHTSGPGGIGVDSGSPR*GAAPVR Trigger: GCGCACTGGTGCGGCCCCGCACCGAGGTGAGCCTGA...GTCCACCCCTATACCTCCTGGACCAGAAGTGTGTATTCCAGCCCCTTTCTCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS-3UTR GCA 90 bp | AGGTCCCGGTCCCTCTTAACCTCATATCCCCGCCCTCACCTCTCCAGACTGCAGGCGTCATCATTGGCCTaGTCCAGCTTGTCCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RSRSLLTSYPRPHLSRLQASSLA*SSLSAS Trigger: GGAGGCGGACAAGCTGGAGCAGGCCAATGATGACGC...CTGCAGTCTGGAGAGGTGAGGGCGGGGATATGAGGTTAAGAGGGACCGGGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS-3UTR GCA 90 bp | TCTGAGAAAGGGGCTGGAATACACACTTCTGGTCCAGGAGGTATAGGGGTGGACGCAGGGAAGCCGCTGTaGGTGAGCACAGCCTCCACG | + |
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Preference number: 4 (lower is better) Translates to: SEKGAGIHTSGPGGIGVDAGKPL*VSTAST Trigger: CGTGGAGGCTGTGCTCACGCACAGCGGCTTCCCTGC...GTCCACCCCTATACCTCCTGGACCAGAAGTGTGTATTCCAGCCCCTTTCTCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS-3UTR TCA 90 bp | TCAAGTTTCCAGATGGTTCTGGGCTCTTCCCCCTTTGAGAGGCTGGTGTGCCACCCACGATGCCCGCTGTaGAGCTGGCACAGTTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: SSFQMVLGSSPFERLVCHPRCPL*SWHSSV Trigger: CACTGAACTGTGCCAGCTTCACAGCGGGCATCGTGG...GTGGCACACCAGCCTCTCAAAGGGGGAAGAGCCCAGAACCATCTGGAAACTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS-3UTR TCA 90 bp | TCTGAGAAAGGGGCTGGAATACACACTTCTGGTCCAGGAGGTATAGGGGTGGACGAGAAAACGCGGCTCTaGCAGTGCTGCACCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: SEKGAGIHTSGPGGIGVDEKTRL*QCCTSS Trigger: CGAGCTGGTGCAGCACTGTCAGAGCCGCGTTTTCTC...GTCCACCCCTATACCTCCTGGACCAGAAGTGTGTATTCCAGCCCCTTTCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS-3UTR TCA 90 bp | CCTCTTAACCTCATATCCCCGCCCTCACCTCTCCAGACTGCAGGTTCCAACAATGAGAAAACGCGGCTCTaGCAGTGCTGCACCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: PLNLISPPSPLQTAGSNNEKTRL*QCCTSS Trigger: CGAGCTGGTGCAGCACTGTCAGAGCCGCGTTTTCTC...ATTGTTGGAACCTGCAGTCTGGAGAGGTGAGGGCGGGGATATGAGGTTAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS-3UTR GCA 90 bp | CCTCTTAACCTCATATCCCCGCCCTCACCTCTCCAGACTGCAGGTTCCAACAATCAGGGCAGCCAAGCGTaGTTGAAGCTCGGCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: PLNLISPPSPLQTAGSNNQGSQA*LKLGHR Trigger: TCTGTGGCCGAGCTTCAAGCACGCTTGGCTGCCCTG...ATTGTTGGAACCTGCAGTCTGGAGAGGTGAGGGCGGGGATATGAGGTTAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS-3UTR GCA 90 bp | TCTGAGAAAGGGGCTGGAATACACACTTCTGGTCCAGGAGGTATAGGGGTGGACGCGTCATCATTGGCCTaGTCCAGCTTGTCCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SEKGAGIHTSGPGGIGVDASSLA*SSLSAS Trigger: GGAGGCGGACAAGCTGGAGCAGGCCAATGATGACGC...GTCCACCCCTATACCTCCTGGACCAGAAGTGTGTATTCCAGCCCCTTTCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS-3UTR GCA 90 bp | TGCCCTGAAATAAGAGTCCCAGGGAGACCTCTGAGAAAGGGGCTGGAATACACAGTCCCCTTGTGCCAGTaGGCCGTAACCTTGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: CPEIRVPGRPLRKGLEYTVPLCQ*AVTLAG Trigger: CCCTGCCAAGGTTACGGCGCACTGGCACAAGGGGAC...TGTGTATTCCAGCCCCTTTCTCAGAGGTCTCCCTGGGACTCTTATTTCAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS-3UTR GCA 90 bp | TCAAGTTTCCAGATGGTTCTGGGCTCTTCCCCCTTTGAGAGGCTGGTGTGCCACAGTGTGGTCCCCTTGTaGCAGTGCGCCGTAACCTTG | + |
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Preference number: 4 (lower is better) Translates to: SSFQMVLGSSPFERLVCHSVVPL*QCAVTL Trigger: CAAGGTTACGGCGCACTGGCACAAGGGGACCACACT...GTGGCACACCAGCCTCTCAAAGGGGGAAGAGCCCAGAACCATCTGGAAACTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS-3UTR GCA 90 bp | CCTCTTAACCTCATATCCCCGCCCTCACCTCTCCAGACTGCAGGTTCCAACAATCTCCTTGCCGAACAGTaGCTTCCACACCGCACCCTT | + |
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Preference number: 4 (lower is better) Translates to: PLNLISPPSPLQTAGSNNLLAEQ*LPHRTL Trigger: AAGGGTGCGGTGTGGAAGGCACTGTTCGGCAAGGAG...ATTGTTGGAACCTGCAGTCTGGAGAGGTGAGGGCGGGGATATGAGGTTAAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS-3UTR GCA 90 bp | TCAAAGGAAGAGTACACCTGCCTGACACTTAAGAGGCTGTGCTGCCAGAGCTGGGCTTGTCCGCCTCCTTaGCGAACAGTGCCTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: SKEEYTCLTLKRLCCQSWACPPP*RTVPST Trigger: TGTGGAAGGCACTGTTCGGCAAGGAGGCGGACAAGC...CCAGCTCTGGCAGCACAGCCTCTTAAGTGTCAGGCAGGTGTACTCTTCCTTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS-3UTR GCA 90 bp | CCAGAAGCCAAGTCGGCCATTGCCCACTTCCTTACTCTCCATCTATGCCTGACAAGTGTGGTCCCCTTGTaGCAGTGCGCCGTAACCTTG | + |
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Preference number: 4 (lower is better) Translates to: PEAKSAIAHFLTLHLCLTSVVPL*QCAVTL Trigger: CAAGGTTACGGCGCACTGGCACAAGGGGACCACACT...TGTCAGGCATAGATGGAGAGTAAGGAAGTGGGCAATGGCCGACTTGGCTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS-3UTR GCA 90 bp | TCAAAGGAAGAGTACACCTGCCTGACACTTAAGAGGCTGTGCTGCCAGAGCTGGCTTGACGAAGAGCAATaGGCCCAGCACCTTAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKEEYTCLTLKRLCCQSWLDEEQ*AQHLSL Trigger: GAGACTAAGGTGCTGGGCGCATTGCTCTTCGTCAAG...CCAGCTCTGGCAGCACAGCCTCTTAAGTGTCAGGCAGGTGTACTCTTCCTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR GCA 90 bp | CATCTATGCCTGACAAGCTTGCCTTCAGACTCCCTTAGTCTGGGACTCAGGACCCTTGACGAAGAGCAATaGGCCCAGCACCTTAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLCLTSLPSDSLSLGLRTLDEEQ*AQHLSL Trigger: GAGACTAAGGTGCTGGGCGCATTGCTCTTCGTCAAG...GGTCCTGAGTCCCAGACTAAGGGAGTCTGAAGGCAAGCTTGTCAGGCATAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCTGAAATAAGAGTCCCAGGGAGACCTCTGAGAAAGGGGCTGGAATACACATGGCACAGTTCAGTGTaGTGTTCTCCTTGGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: CPEIRVPGRPLRKGLEYTWHSSV*CSPWAR Trigger: CCGTGCCCAAGGAGAACAGCACACTGAACTGTGCCA...TGTGTATTCCAGCCCCTTTCTCAGAGGTCTCCCTGGGACTCTTATTTCAGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR GCA 90 bp | CAACCTCATGCAGAGTCAGAAGGGTTGGGATTCACAGTCACCCTTAAATATACAGCAGGGAAGCCGCTGTaGGTGAGCACAGCCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: QPHAESEGLGFTVTLKYTAGKPL*VSTAST Trigger: CGTGGAGGCTGTGCTCACGCACAGCGGCTTCCCTGC...TGTATATTTAAGGGTGACTGTGAATCCCAACCCTTCTGACTCTGCATGAGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR CCA 90 bp | CATCTATGCCTGACAAGCTTGCCTTCAGACTCCCTTAGTCTGGGACTCAGGACCGTGTGCTGTTCTCCTTaGGCACGGAGATGTAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLCLTSLPSDSLSLGLRTVCCSP*ARRCRC Trigger: ACACCTACATCTCCGTGCCCAAGGAGAACAGCACAC...GGTCCTGAGTCCCAGACTAAGGGAGTCTGAAGGCAAGCTTGTCAGGCATAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAGGAAGAGTACACCTGCCTGACACTTAAGAGGCTGTGCTGCCAGAGCTGGGTGTGCTGTTCTCCTTaGGCACGGAGATGTAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKEEYTCLTLKRLCCQSWVCCSP*ARRCRC Trigger: ACACCTACATCTCCGTGCCCAAGGAGAACAGCACAC...CCAGCTCTGGCAGCACAGCCTCTTAAGTGTCAGGCAGGTGTACTCTTCCTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCAGGTTCCAACAATAATTCTGTAAGTGCCCTATCTCCCCGATACATCCAAGTCCCCTTGTGCCAGTaGGCCGTAACCTTGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TAGSNNNSVSALSPRYIQVPLCQ*AVTLAG Trigger: CCCTGCCAAGGTTACGGCGCACTGGCACAAGGGGAC...TTGGATGTATCGGGGAGATAGGGCACTTACAGAATTATTGTTGGAACCTGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR CCA 90 bp | AACACTCAACCTCATGCAGAGTCAGAAGGGTTGGGATTCACAGTCACCCTTAAATGCGGGCGTCATCATTaGCCTGCTCCAGCTTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NTQPHAESEGLGFTVTLKCGRHH*PAPACP Trigger: CGGACAAGCTGGAGCAGGCCAATGATGACGCCCGCA...TTTAAGGGTGACTGTGAATCCCAACCCTTCTGACTCTGCATGAGGTTGAGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR GCA 90 bp | AACACTCAACCTCATGCAGAGTCAGAAGGGTTGGGATTCACAGTCACCCTTAAACTCCTTGCCGAACAGTaGCTTCCACACCGCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTQPHAESEGLGFTVTLKLLAEQ*LPHRTL Trigger: AAGGGTGCGGTGTGGAAGGCACTGTTCGGCAAGGAG...TTTAAGGGTGACTGTGAATCCCAACCCTTCTGACTCTGCATGAGGTTGAGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| 3UTR CAA 72 bp | GATCCTGCATGTGGGACGAGGATGGTGACGTTGGTGTaGCTGCTGGTAGTGATAATGCTGATACTGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DPACGTRMVTLV*LLVVIMLILML Trigger: CAGCATCAGTATCAGCATTATCACTACCAGCAGCAACACCAACGTCACCATCCTCGTCCCACATGCAGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| 3UTR CAA 72 bp | ACCAGTGATCCTGCATGTGGGACGAGGATGGTGACGTaGGTGTTGCTGCTGGTAGTGATAATGCTGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: TSDPACGTRMVT*VLLLVVIMLIL Trigger: CAGTATCAGCATTATCACTACCAGCAGCAACACCAACGTCACCATCCTCGTCCCACATGCAGGATCACTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGACATCTCACATCAATCTCTGGCTCTACATGCACACACAAAATAAACATTGGAAGCCGCTGTGCGTaGGCACAGCCTCCACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GRHLTSISGSTCTHKINIGSRCA*AQPPRC Trigger: GCATCGTGGAGGCTGTGCTCACGCACAGCGGCTTCC...AATGTTTATTTTGTGTGTGCATGTAGAGCCAGAGATTGATGTGAGATGTCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044857.4 |
||
| CDS-3UTR GCA 90 bp | ACTGCAGGTTCCAACAATAATTCTGTAAGTGCCCTATCTCCCCGATACATCCAATGGCACAGTTCAGTGTaGTGTTCTCCTTGGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: TAGSNNNSVSALSPRYIQWHSSV*CSPWAR Trigger: CCGTGCCCAAGGAGAACAGCACACTGAACTGTGCCA...TTGGATGTATCGGGGAGATAGGGCACTTACAGAATTATTGTTGGAACCTGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR GCA 90 bp | CCGGAACCCTGTCTCAGAACAAACTTTGTAAATATTAACCTTAAAACCCTCAAGGCTTGTCCGCCTCCTTaGCGAACAGTGCCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PEPCLRTNFVNINLKTLKACPPP*RTVPST Trigger: TGTGGAAGGCACTGTTCGGCAAGGAGGCGGACAAGC...CTTGAGGGTTTTAAGGTTAATATTTACAAAGTTTGTTCTGAGACAGGGTTCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| 3UTR CAA 72 bp | AAGTTAAACACTCAACCTCATGCAGAGTCAGAAGGGTaGGGATTCACAGTCACCCTTAAATATACAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLNTQPHAESEG*GFTVTLKYTAR Trigger: CCTTGCTGTATATTTAAGGGTGACTGTGAATCCCAACCCTTCTGACTCTGCATGAGGTTGAGTGTTTAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS GCA 90 bp | CCAGCTCGGAGAAGAGAAGGGCAAAGGCGCTCAGGCTCACCTCGGTaGGGGGCCGCACCAGTGCGCGCTCTAGCAGCGCCGACTTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PARRREGQRRSGSPR*GAAPVRALAAPTSR Trigger: GCGGGAAGTCGGCGCTGCTAGAGCGCGCACTGGTGCGGCCCCGCACCGAGGTGAGCCTGAGCGCCTTTGCCCTTCTCTTCTCCGAGCTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS GCA 90 bp | GTCCCCTTGTGCCAGTGCGCCGTAACCTTGGCAGGGAAGCCGCTGTaGGTGAGCACAGCCTCCACGATGCCCGCTGTGAAGCTGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: VPLCQCAVTLAGKPL*VSTASTMPAVKLAQ Trigger: CTGTGCCAGCTTCACAGCGGGCATCGTGGAGGCTGTGCTCACGCACAGCGGCTTCCCTGCCAAGGTTACGGCGCACTGGCACAAGGGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS GCA 90 bp | CTTGCCGAACAGTGCCTTCCACACCGCACCCTTGACGAAGAGCAATaGGCCCAGCACCTTAGTCTCACGCCGGGCACCCTTCTCACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LAEQCLPHRTLDEEQ*AQHLSLTPGTLLTG Trigger: GCCCGTGAGAAGGGTGCCCGGCGTGAGACTAAGGTGCTGGGCGCATTGCTCTTCGTCAAGGGTGCGGTGTGGAAGGCACTGTTCGGCAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS GCA 90 bp | GTCATCATTGGCCTGCTCCAGCTTGTCCGCCTCCTTGCCGAACAGTaGCTTCCACACCGCACCCTTGACGAAGAGCAATGCGCCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VIIGLLQLVRLLAEQ*LPHRTLDEEQCAQH Trigger: GTGCTGGGCGCATTGCTCTTCGTCAAGGGTGCGGTGTGGAAGGCACTGTTCGGCAAGGAGGCGGACAAGCTGGAGCAGGCCAATGATGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR CAA 90 bp | CATCTATGCCTGACAAGCTTGCCTTCAGACTCCCTTAGTCTGGGACTCAGGACCCAGTGCGCCGTAACCTaGGCAGGGAAGCCGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HLCLTSLPSDSLSLGLRTQCAVT*AGKPLC Trigger: GCACAGCGGCTTCCCTGCCAAGGTTACGGCGCACTG...GGTCCTGAGTCCCAGACTAAGGGAGTCTGAAGGCAAGCTTGTCAGGCATAGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS GCA 90 bp | ACAGCCTCTTCAAATTTGATCATGAGTGTGGTCCCCTTGTGCCAGTaGGCCGTAACCTTGGCAGGGAAGCCGCTGTGCGTGAGCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TASSNLIMSVVPLCQ*AVTLAGKPLCVSTA Trigger: GGCTGTGCTCACGCACAGCGGCTTCCCTGCCAAGGTTACGGCGCACTGGCACAAGGGGACCACACTCATGATCAAATTTGAAGAGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR CAA 90 bp | TCTGAGAAAGGGGCTGGAATACACACTTCTGGTCCAGGAGGTATAGGGGTGGACTTGGCCTGCTCCAGCTaGTCCGCCTCCTTGCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SEKGAGIHTSGPGGIGVDLACSS*SASLPN Trigger: GTTCGGCAAGGAGGCGGACAAGCTGGAGCAGGCCAA...GTCCACCCCTATACCTCCTGGACCAGAAGTGTGTATTCCAGCCCCTTTCTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTTAACCTCATATCCCCGCCCTCACCTCTCCAGACTGCAGGTTCCAACAATGTGCGGGCGTCATCATaGGCCTGCTCCAGCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLNLISPPSPLQTAGSNNVRASS*ACSSLS Trigger: GGACAAGCTGGAGCAGGCCAATGATGACGCCCGCAC...ATTGTTGGAACCTGCAGTCTGGAGAGGTGAGGGCGGGGATATGAGGTTAAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR CAA 90 bp | AAGTCGGCCATTGCCCACTTCCTTACTCTCCATCTATGCCTGACAAGCTTGCCTCAGTGCGCCGTAACCTaGGCAGGGAAGCCGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KSAIAHFLTLHLCLTSLPQCAVT*AGKPLC Trigger: GCACAGCGGCTTCCCTGCCAAGGTTACGGCGCACTG...AGGCAAGCTTGTCAGGCATAGATGGAGAGTAAGGAAGTGGGCAATGGCCGACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS GCA 90 bp | GCAATCACAGCCTCTTCAAATTTGATCATGAGTGTGGTCCCCTTGTaGCAGTGCGCCGTAACCTTGGCAGGGAAGCCGCTGTGCGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AITASSNLIMSVVPL*QCAVTLAGKPLCVS Trigger: GCTCACGCACAGCGGCTTCCCTGCCAAGGTTACGGCGCACTGGCACAAGGGGACCACACTCATGATCAAATTTGAAGAGGCTGTGATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR CAA 90 bp | CCAGAAGCCAAGTCGGCCATTGCCCACTTCCTTACTCTCCATCTATGCCTGACATTCCACACCGCACCCTaGACGAAGAGCAATGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PEAKSAIAHFLTLHLCLTFHTAP*TKSNAP Trigger: GGGCGCATTGCTCTTCGTCAAGGGTGCGGTGTGGAA...TGTCAGGCATAGATGGAGAGTAAGGAAGTGGGCAATGGCCGACTTGGCTTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR CAA 90 bp | CATCTATGCCTGACAAGCTTGCCTTCAGACTCCCTTAGTCTGGGACTCAGGACCATGAGTGTGGTCCCCTaGTGCCAGTGCGCCGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: HLCLTSLPSDSLSLGLRTMSVVP*CQCAVT Trigger: GGTTACGGCGCACTGGCACAAGGGGACCACACTCAT...GGTCCTGAGTCCCAGACTAAGGGAGTCTGAAGGCAAGCTTGTCAGGCATAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCAGGTTCCAACAATAATTCTGTAAGTGCCCTATCTCCCCGATACATCCAAGTGCGGGCGTCATCATaGGCCTGCTCCAGCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TAGSNNNSVSALSPRYIQVRASS*ACSSLS Trigger: GGACAAGCTGGAGCAGGCCAATGATGACGCCCGCAC...TTGGATGTATCGGGGAGATAGGGCACTTACAGAATTATTGTTGGAACCTGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAACCTCATGCAGAGTCAGAAGGGTTGGGATTCACAGTCACCCTTAAATATAGCTTGTCCGCCTCCTaGCCGAACAGTGCCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TQPHAESEGLGFTVTLKYSLSAS*PNSAFH Trigger: GTGGAAGGCACTGTTCGGCAAGGAGGCGGACAAGCT...ATATTTAAGGGTGACTGTGAATCCCAACCCTTCTGACTCTGCATGAGGTTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAACCTCATGCAGAGTCAGAAGGGTTGGGATTCACAGTCACCCTTAAATATATGAGTGTGGTCCCCTaGTGCCAGTGCGCCGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: TQPHAESEGLGFTVTLKYMSVVP*CQCAVT Trigger: GGTTACGGCGCACTGGCACAAGGGGACCACACTCAT...ATATTTAAGGGTGACTGTGAATCCCAACCCTTCTGACTCTGCATGAGGTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR CAA 90 bp | CCGGAACCCTGTCTCAGAACAAACTTTGTAAATATTAACCTTAAAACCCTCAAGTTCCACACCGCACCCTaGACGAAGAGCAATGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PEPCLRTNFVNINLKTLKFHTAP*TKSNAP Trigger: GGGCGCATTGCTCTTCGTCAAGGGTGCGGTGTGGAA...CTTGAGGGTTTTAAGGTTAATATTTACAAAGTTTGTTCTGAGACAGGGTTCCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS-3UTR CAA 90 bp | CCGGAACCCTGTCTCAGAACAAACTTTGTAAATATTAACCTTAAAACCCTCAAGAGCTTGTCCGCCTCCTaGCCGAACAGTGCCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PEPCLRTNFVNINLKTLKSLSAS*PNSAFH Trigger: GTGGAAGGCACTGTTCGGCAAGGAGGCGGACAAGCT...CTTGAGGGTTTTAAGGTTAATATTTACAAAGTTTGTTCTGAGACAGGGTTCCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS GCA 72 bp | AGAAGAGAAGGGCAAAGGCGCTCAGGCTCACCTCGGTaGGGGGCCGCACCAGTGCGCGCTCTAGCAGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RREGQRRSGSPR*GAAPVRALAAP Trigger: CGGCGCTGCTAGAGCGCGCACTGGTGCGGCCCCGCACCGAGGTGAGCCTGAGCGCCTTTGCCCTTCTCTTCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS GCA 72 bp | TCGGGCGCCCACCTGTCGGCCCAGGGCAGCCAAGCGTaGTTGAAGCTCGGCCACAGAGAAAACGCGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGAHLSAQGSQA*LKLGHRENAAL Trigger: CAGAGCCGCGTTTTCTCTGTGGCCGAGCTTCAAGCACGCTTGGCTGCCCTGGGCCGACAGGTGGGCGCCCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS CAA 72 bp | GGCGCCCACCTGTCGGCCCAGGGCAGCCAAGCGTGCTaGAAGCTCGGCCACAGAGAAAACGCGGCTCTGACA | + |
|
Preference number: 6 (lower is better) Translates to: GAHLSAQGSQAC*KLGHRENAALT Trigger: TGTCAGAGCCGCGTTTTCTCTGTGGCCGAGCTTCAAGCACGCTTGGCTGCCCTGGGCCGACAGGTGGGCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS GCA 72 bp | TGCCAGTGCGCCGTAACCTTGGCAGGGAAGCCGCTGTaGGTGAGCACAGCCTCCACGATGCCCGCTGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CQCAVTLAGKPL*VSTASTMPAVK Trigger: CTTCACAGCGGGCATCGTGGAGGCTGTGCTCACGCACAGCGGCTTCCCTGCCAAGGTTACGGCGCACTGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS CAA 72 bp | ATGAGTGTGGTCCCCTTGTGCCAGTGCGCCGTAACCTaGGCAGGGAAGCCGCTGTGCGTGAGCACAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: MSVVPLCQCAVT*AGKPLCVSTAS Trigger: GGAGGCTGTGCTCACGCACAGCGGCTTCCCTGCCAAGGTTACGGCGCACTGGCACAAGGGGACCACACTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS CAA 90 bp | AGCTTGTCCGCCTCCTTGCCGAACAGTGCCTTCCACACCGCACCCTaGACGAAGAGCAATGCGCCCAGCACCTTAGTCTCACGCCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLSASLPNSAFHTAP*TKSNAPSTLVSRRA Trigger: TGCCCGGCGTGAGACTAAGGTGCTGGGCGCATTGCTCTTCGTCAAGGGTGCGGTGTGGAAGGCACTGTTCGGCAAGGAGGCGGACAAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS GCA 72 bp | GGCCTGCTCCAGCTTGTCCGCCTCCTTGCCGAACAGTaGCTTCCACACCGCACCCTTGACGAAGAGCAATGC | + |
|
Preference number: 6 (lower is better) Translates to: GLLQLVRLLAEQ*LPHRTLDEEQC Trigger: GCATTGCTCTTCGTCAAGGGTGCGGTGTGGAAGGCACTGTTCGGCAAGGAGGCGGACAAGCTGGAGCAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS CAA 72 bp | GCGTCATCATTGGCCTGCTCCAGCTTGTCCGCCTCCTaGCCGAACAGTGCCTTCCACACCGCACCCTTGACG | + |
|
Preference number: 6 (lower is better) Translates to: ASSLACSSLSAS*PNSAFHTAPLT Trigger: CGTCAAGGGTGCGGTGTGGAAGGCACTGTTCGGCAAGGAGGCGGACAAGCTGGAGCAGGCCAATGATGACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS CAA 90 bp | AATTTGATCATGAGTGTGGTCCCCTTGTGCCAGTGCGCCGTAACCTaGGCAGGGAAGCCGCTGTGCGTGAGCACAGCCTCCACGATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: NLIMSVVPLCQCAVT*AGKPLCVSTASTMP Trigger: GGGCATCGTGGAGGCTGTGCTCACGCACAGCGGCTTCCCTGCCAAGGTTACGGCGCACTGGCACAAGGGGACCACACTCATGATCAAATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS CAA 72 bp | GCCTCCTTGCCGAACAGTGCCTTCCACACCGCACCCTaGACGAAGAGCAATGCGCCCAGCACCTTAGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ASLPNSAFHTAP*TKSNAPSTLVS Trigger: TGAGACTAAGGTGCTGGGCGCATTGCTCTTCGTCAAGGGTGCGGTGTGGAAGGCACTGTTCGGCAAGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS CAA 90 bp | AAAGTGCGGGCGTCATCATTGGCCTGCTCCAGCTTGTCCGCCTCCTaGCCGAACAGTGCCTTCCACACCGCACCCTTGACGAAGAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: KVRASSLACSSLSAS*PNSAFHTAPLTKSN Trigger: ATTGCTCTTCGTCAAGGGTGCGGTGTGGAAGGCACTGTTCGGCAAGGAGGCGGACAAGCTGGAGCAGGCCAATGATGACGCCCGCACTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS CAA 90 bp | CGGGCAATCACAGCCTCTTCAAATTTGATCATGAGTGTGGTCCCCTaGTGCCAGTGCGCCGTAACCTTGGCAGGGAAGCCGCTGTGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RAITASSNLIMSVVP*CQCAVTLAGKPLCV Trigger: CACGCACAGCGGCTTCCCTGCCAAGGTTACGGCGCACTGGCACAAGGGGACCACACTCATGATCAAATTTGAAGAGGCTGTGATTGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
||
| CDS CAA 90 bp | CGTCCCTCCAGGGCCCGATCTCGGGCAATCACAGCCTCTTCAAATTaGATCATGAGTGTGGTCCCCTTGTGCCAGTGCGCCGTAACCTTG | + |
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Preference number: 6 (lower is better) Translates to: RPSRARSRAITASSN*IMSVVPLCQCAVTL Trigger: CAAGGTTACGGCGCACTGGCACAAGGGGACCACACTCATGATCAAATTTGAAGAGGCTGTGATTGCCCGAGATCGGGCCCTGGAGGGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS GCA 72 bp | TCAAATTTGATCATGAGTGTGGTCCCCTTGTGCCAGTaGGCCGTAACCTTGGCAGGGAAGCCGCTGTGCGTG | + |
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Preference number: 6 (lower is better) Translates to: SNLIMSVVPLCQ*AVTLAGKPLCV Trigger: CACGCACAGCGGCTTCCCTGCCAAGGTTACGGCGCACTGGCACAAGGGGACCACACTCATGATCAAATTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS GCA 72 bp | GCCTCTTCAAATTTGATCATGAGTGTGGTCCCCTTGTaGCAGTGCGCCGTAACCTTGGCAGGGAAGCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: ASSNLIMSVVPL*QCAVTLAGKPL Trigger: CAGCGGCTTCCCTGCCAAGGTTACGGCGCACTGGCACAAGGGGACCACACTCATGATCAAATTTGAAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS CAA 72 bp | AGGGCCCGATCTCGGGCAATCACAGCCTCTTCAAATTaGATCATGAGTGTGGTCCCCTTGTGCCAGTGCGCC | + |
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Preference number: 6 (lower is better) Translates to: RARSRAITASSN*IMSVVPLCQCA Trigger: GGCGCACTGGCACAAGGGGACCACACTCATGATCAAATTTGAAGAGGCTGTGATTGCCCGAGATCGGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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| CDS CAA 72 bp | ACAGCCTCTTCAAATTTGATCATGAGTGTGGTCCCCTaGTGCCAGTGCGCCGTAACCTTGGCAGGGAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: TASSNLIMSVVP*CQCAVTLAGKP Trigger: CGGCTTCCCTGCCAAGGTTACGGCGCACTGGCACAAGGGGACCACACTCATGATCAAATTTGAAGAGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044857.4 ENSMUST00000207787.2 |
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