Pregenerated sensors for TRAPPC13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021711Ensembl transcript IDs: ENSMUST00000022224.16, ENSMUST00000141557.8, ENSMUST00000144060.8, ENSMUST00000179891.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCATCAGAACCCATTACAGATGGTTGTGAGCCACCATGTGCTTGCTaGGAATTGAACTCAGGACCTCTAGAAGAGCAGTTAGGGCTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: ASEPITDGCEPPCAC*ELNSGPLEEQLGLL Trigger: TAAGAGCCCTAACTGCTCTTCTAGAGGTCCTGAGTTCAATTCTCAGCAAGCACATGGTGGCTCACAACCATCTGTAATGGGTTCTGATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR TCA 90 bp | CTGAAACAGTGGTTCAGTCATAAGAAGATGCTGATAAATACGACTTaGCCAGTCTGTCAGCCCAAAGGAACGGACCTCAGTTCTCACTGC | + |
|
Preference number: 1 (lower is better) Translates to: LKQWFSHKKMLINTT*PVCQPKGTDLSSHC Trigger: GCAGTGAGAACTGAGGTCCGTTCCTTTGGGCTGACAGACTGGTCAAGTCGTATTTATCAGCATCTTCTTATGACTGAACCACTGTTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR GCA 90 bp | GAGTGTCTGTTAACGTGTGTTGGTATGTGTACACTAAGACAGACATaGAACCATACAACAATTTTGAAAACAACTGAAATGTTTCTCTGG | + |
|
Preference number: 1 (lower is better) Translates to: ECLLTCVGMCTLRQT*NHTTILKTTEMFLW Trigger: CCAGAGAAACATTTCAGTTGTTTTCAAAATTGTTGTATGGTTGCATGTCTGTCTTAGTGTACACATACCAACACACGTTAACAGACACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR TCA 90 bp | AGACATTCATCAATCATGACTAATGTATGTGAGGGGCAAGTCTTCTaGATATACCTTTCATTTTGGACCAAACAATTTGTCATGGCAATA | + |
|
Preference number: 1 (lower is better) Translates to: RHSSIMTNVCEGQVF*IYLSFWTKQFVMAI Trigger: TATTGCCATGACAAATTGTTTGGTCCAAAATGAAAGGTATATTCAGAAGACTTGCCCCTCACATACATTAGTCATGATTGATGAATGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGCGCTCTTAATTGCTGCCTGCCTACTCAGATaGCAGAATTCATCTGTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: GWELNSGPLEEQSALLIAACLLR*QNSSVH Trigger: GTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGC...AGCAATTAAGAGCGCTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCATAAGACATACTTGTTTTCACTACTaGTCACTGCACAAAGCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: TCLPTQMAEFICSPSIRHTCFHY*SLHKAD Trigger: GTCAGCTTTGTGCAGTGATCAGTAGTGAAAACAAGT...ATGTCTTATGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAAAGACATTGAATCCCATTACAGATGGCTGTGAGCCATCATGTGGTTGGCTGACTTGTTTTCACTACTaGTCACTGCACAAAGCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: KKTLNPITDGCEPSCGWLTCFHY*SLHKAD Trigger: GTCAGCTTTGTGCAGTGATCAGTAGTGAAAACAAGT...CAGCCAACCACATGATGGCTCACAGCCATCTGTAATGGGATTCAATGTCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGACTAAGCACCTAGGAAAGAGAATGCAGTTGACCATGATTAGTTCAACTAACGCCTGCCTACTCAGATaGCAGAATTCATCTGTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LTKHLGKRMQLTMISSTNACLLR*QNSSVH Trigger: GTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGC...GTTAGTTGAACTAATCATGGTCAACTGCATTCTCTTTCCTAGGTGCTTAGTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGAAAACAACTGAAATGTTTCTCTGGCTGAATTGTTTTACACAGGCCTCTCTTGCCTGCCTACTCAGATaGCAGAATTCATCTGTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LKTTEMFLWLNCFTQASLACLLR*QNSSVH Trigger: GTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGC...AAGAGAGGCCTGTGTAAAACAATTCAGCCAGAGAAACATTTCAGTTGTTTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCATAAGACATCTGATACCCAGCCCTTTACAAAAAGGTTCGCTGACTGCTTTTCAGAGAGCATTTCTGTaGTTAAACAAGAAGTCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: SIRHLIPSPLQKGSLTAFQRAFL*LNKKSN Trigger: GTTAGACTTCTTGTTTAATCACAGAAATGCTCTCTG...AAAAGCAGTCAGCGAACCTTTTTGTAAAGGGCTGGGTATCAGATGTCTTATGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTGTTGACTAAGCACCTAGGAAAGAGAATGCAGTTGACCATGATTAGTTCAACTTGTTTTCACTACTaGTCACTGCACAAAGCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: SLLTKHLGKRMQLTMISSTCFHY*SLHKAD Trigger: GTCAGCTTTGTGCAGTGATCAGTAGTGAAAACAAGT...TGAACTAATCATGGTCAACTGCATTCTCTTTCCTAGGTGCTTAGTCAACAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACTGTTGCTGTCTGTAGACACACCAGAAAAAGACATTGAATCCCATTACAGAAAATGTTTCTCTGGCTaGATTGTTTTACACAGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: TLLLSVDTPEKDIESHYRKCFSG*IVLHRP Trigger: AGGCCTGTGTAAAACAATTCAGCCAGAGAAACATTT...TCTGTAATGGGATTCAATGTCTTTTTCTGGTGTGTCTACAGACAGCAACAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACTGTTGCTGTCTGTAGACACACCAGAAAAAGACATTGAATCCCATTACAGACAGAGAGCATTTCTGTaGTTAAACAAGAAGTCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: TLLLSVDTPEKDIESHYRQRAFL*LNKKSN Trigger: GTTAGACTTCTTGTTTAATCACAGAAATGCTCTCTG...TCTGTAATGGGATTCAATGTCTTTTTCTGGTGTGTCTACAGACAGCAACAGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR CAA 90 bp | GTTGGTATGTGTACACTAAGACAGACATGCAACCATACAACAATTTaGAAAACAACTGAAATGTTTCTCTGGCTGAATTGTTTTACACAG | + |
|
Preference number: 2 (lower is better) Translates to: VGMCTLRQTCNHTTI*KTTEMFLWLNCFTQ Trigger: CTGTGTAAAACAATTCAGCCAGAGAAACATTTCAGTTGTTTTCAAAATTGTTGTATGGTTGCATGTCTGTCTTAGTGTACACATACCAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCCAGCCCCCGAATGTTTGTGATTAAACGGACAAATAAATCTTTTATATTAACACTAAGACAGACATaGAACCATACAACAATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LSSPRMFVIKRTNKSFILTLRQT*NHTTIL Trigger: CAAAATTGTTGTATGGTTGCATGTCTGTCTTAGTGT...TAATATAAAAGATTTATTTGTCCGTTTAATCACAAACATTCGGGGGCTGGAGAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCCAGCCCCCGAATGTTTGTGATTAAACGGACAAATAAATCTTTTATATTAACTGAAATGTTTCTCTaGCTGAATTGTTTTACACAG | + |
|
Preference number: 2 (lower is better) Translates to: LSSPRMFVIKRTNKSFILTEMFL*LNCFTQ Trigger: CTGTGTAAAACAATTCAGCCAGAGAAACATTTCAGT...TAATATAAAAGATTTATTTGTCCGTTTAATCACAAACATTCGGGGGCTGGAGAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGACTAAGCACCTAGGAAAGAGAATGCAGTTGACCATGATTAGTTCAACTAACTGTAGCCTAGGGGCCTaGGCAAGCAGGTCCATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LTKHLGKRMQLTMISSTNCSLGA*ASRSIN Trigger: GTTGATGGACCTGCTTGCCAAGGCCCCTAGGCTACA...GTTAGTTGAACTAATCATGGTCAACTGCATTCTCTTTCCTAGGTGCTTAGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR TCA 72 bp | CCCATTACAGATGGTTGTGAGCCACCATGTGCTTGCTaGGAATTGAACTCAGGACCTCTAGAAGAGCAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: PITDGCEPPCAC*ELNSGPLEEQL Trigger: TAACTGCTCTTCTAGAGGTCCTGAGTTCAATTCTCAGCAAGCACATGGTGGCTCACAACCATCTGTAATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACTGTTGCTGTCTGTAGACACACCAGAAAAAGACATTGAATCCCATTACAGAGTTTCTCTGGCTGAATaGTTTTACACAGGCCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TLLLSVDTPEKDIESHYRVSLAE*FYTGLS Trigger: AGAGAGGCCTGTGTAAAACAATTCAGCCAGAGAAAC...TCTGTAATGGGATTCAATGTCTTTTTCTGGTGTGTCTACAGACAGCAACAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR TCA 72 bp | TCAATCATGACTAATGTATGTGAGGGGCAAGTCTTCTaGATATACCTTTCATTTTGGACCAAACAATTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SIMTNVCEGQVF*IYLSFWTKQFV Trigger: GACAAATTGTTTGGTCCAAAATGAAAGGTATATTCAGAAGACTTGCCCCTCACATACATTAGTCATGATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR TCA 72 bp | ATATATAGTAGGGATTTTGAACTCGCCAAACTAGGATaGAGTTTATTTAACAGCATGGGTTTTGTTTCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: IYSRDFELAKLG*SLFNSMGFVSL Trigger: TAGGGAAACAAAACCCATGCTGTTAAATAAACTTCATCCTAGTTTGGCGAGTTCAAAATCCCTACTATATAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR GCA 90 bp | ACGGATACACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCAAGCGAGGAGCTGGGGTaGAGTTTCCCCAGCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TDTPACLLRWQNSSVHRASEELG*SFPSCR Trigger: ACGACAGCTGGGGAAACTGCACCCCAGCTCCTCGCT...TGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGTGTATCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | ATTACAGATGGCTGTGAGCCATCATGTGGTTGGCTGGGAATTGAACTCAGGACCGGCAGAGCGAGGAGCTaGGGTGCAGTTTCCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITDGCEPSCGWLGIELRTGRARS*GAVSPA Trigger: AGCTGGGGAAACTGCACCCCAGCTCCTCGCTCTGCC...GGTCCTGAGTTCAATTCCCAGCCAACCACATGATGGCTCACAGCCATCTGTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| 3UTR CAA 72 bp | CAGATGGCTGTGAGCCATCATGTGGTTGGCTGGGAATaGAACTCAGGACCTCTGGAAGAGCAGTCAGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QMAVSHHVVGWE*NSGPLEEQSAL Trigger: GAGCGCTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCCAACCACATGATGGCTCACAGCCATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR TCA 90 bp | ATTACAGATGGCTGTGAGCCATCATGTGGTTGGCTGGGAATTGAACTCAGGACCCCCCAGCTGTCGTCCTaGGATCCCACACCAGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ITDGCEPSCGWLGIELRTPQLSS*DPTPVD Trigger: ATCCACTGGTGTGGGATCTCAGGACGACAGCTGGGG...GGTCCTGAGTTCAATTCCCAGCCAACCACATGATGGCTCACAGCCATCTGTAAT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTCCAGGAGGATGGAATTGGTGTTaGACATCTCCAGCACGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRRISEFEASLVYKVSPGGWNWC*TSPARG Trigger: ACCTCGTGCTGGAGATGTGCAACACCAATTCCATCC...TCCTGGACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCTTGGCAAGCAGGTCCATCAACCACGGATACACCTGCCTGCCTACTCAGAAACATCCCCATAACCTaGAGCCATCCTTTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPWQAGPSTTDTPACLLRNIPIT*SHPLKL Trigger: CAGCTTCAAAGGATGGCTCCAGGTTATGGGGATGTT...TCTGAGTAGGCAGGCAGGTGTATCCGTGGTTGATGGACCTGCTTGCCAAGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCATAAGACATGGCAGAGCGAGGAGCTaGGGTGCAGTTTCCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TCLPTQMAEFICSPSIRHGRARS*GAVSPA Trigger: AGCTGGGGAAACTGCACCCCAGCTCCTCGCTCTGCC...ATGTCTTATGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGCGCTCTTAATTGCTAAGCCAGAGACACTTTaGAGCCCCTGTACTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GWELNSGPLEEQSALLIAKPETL*SPCTED Trigger: GTCCTCAGTACAGGGGCTCCAAAGTGTCTCTGGCTT...AGCAATTAAGAGCGCTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTCCAGGATTAGAAATGTGTCAGTaGGTCTTAAGCCAGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: GRRISEFEASLVYKVSPGLEMCQ*VLSQRH Trigger: GTGTCTCTGGCTTAAGACTCACTGACACATTTCTAA...TCCTGGACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR TCA 90 bp | GGGCCTTGGCAAGCAGGTCCATCAACCACGGATACACCTGCCTGCCTACTCAGATGTCATTGTGAACACTaGTATAACTGGAAAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GPWQAGPSTTDTPACLLRCHCEH*YNWKRS Trigger: AGACCTTTTCCAGTTATATCAGTGTTCACAATGACA...TCTGAGTAGGCAGGCAGGTGTATCCGTGGTTGATGGACCTGCTTGCCAAGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR GCA 90 bp | ACGGATACACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCACGTGTATCCATTGGCTaGAAATATCCTCTGGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TDTPACLLRWQNSSVHRARVSIG*KYPLDP Trigger: TGGGTCCAGAGGATATTTGCAGCCAATGGATACACG...TGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGTGTATCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR GCA 90 bp | GGATACACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCATAGGATGGAATTGGTGTTaGACATCTCCAGCACGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GYTCLPTQMAEFICSPSIGWNWC*TSPARG Trigger: ACCTCGTGCTGGAGATGTGCAACACCAATTCCATCC...TATGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGTGTATCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAAGCAGGTCCATCAACCACGGATACACCTGCCTGCCTACTCAGATGGCAGCTGCAAATTCCTTCTTaGGCTTTAGGCAGTATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WQAGPSTTDTPACLLRWQLQIPS*ALGSIS Trigger: ACTTATACTGCCTAAAGCCCAAGAAGGAATTTGCAG...CTGCCATCTGAGTAGGCAGGCAGGTGTATCCGTGGTTGATGGACCTGCTTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | ACGGATACACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCAACCAGTGGATGGAATTaGTGTTGCACATCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TDTPACLLRWQNSSVHRATSGWN*CCTSPA Trigger: TGCTGGAGATGTGCAACACCAATTCCATCCACTGGT...TGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGTGTATCCGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTGTGGCAGAGCGAGGAGCTaGGGTGCAGTTTCCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFTTDHCTKLTKYREHFCGRARS*GAVSPA Trigger: AGCTGGGGAAACTGCACCCCAGCTCCTCGCTCTGCC...ACAGAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTCCAGGATGTCATTGTGAACACTaGTATAACTGGAAAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRRISEFEASLVYKVSPGCHCEH*YNWKRS Trigger: AGACCTTTTCCAGTTATATCAGTGTTCACAATGACA...TCCTGGACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCCCCCAGCTGTCGTCCTaGGATCCCACACCAGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LVFTTDHCTKLTKYREHFPQLSS*DPTPVD Trigger: ATCCACTGGTGTGGGATCTCAGGACGACAGCTGGGG...GAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR TCA 90 bp | ACACTGTTGCTGTCTGTAGACACACCAGAAAAAGACATTGAATCCCATTACAGACCCCAGCTGTCGTCCTaGGATCCCACACCAGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLLLSVDTPEKDIESHYRPQLSS*DPTPVD Trigger: ATCCACTGGTGTGGGATCTCAGGACGACAGCTGGGG...TCTGTAATGGGATTCAATGTCTTTTTCTGGTGTGTCTACAGACAGCAACAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR GCA 90 bp | ATTACAGATGGCTGTGAGCCATCATGTGGTTGGCTGGGAATTGAACTCAGGACCCGTGTATCCATTGGCTaGAAATATCCTCTGGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: ITDGCEPSCGWLGIELRTRVSIG*KYPLDP Trigger: TGGGTCCAGAGGATATTTGCAGCCAATGGATACACG...GGTCCTGAGTTCAATTCCCAGCCAACCACATGATGGCTCACAGCCATCTGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCAGCGAGGAGCTGGGGTaGAGTTTCCCCAGCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LVFTTDHCTKLTKYREHFSEELG*SFPSCR Trigger: ACGACAGCTGGGGAAACTGCACCCCAGCTCCTCGCT...GAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR CCA 90 bp | ACGGATACACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCAAGGCAGTATAAGTATTaGCGTGTATCCATTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TDTPACLLRWQNSSVHRARQYKY*RVSIGC Trigger: GCAGCCAATGGATACACGCCAATACTTATACTGCCT...TGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGTGTATCCGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR GCA 90 bp | ACGGATACACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCATATGCCGGCTTTTTCTaGAAATTCCTTCTTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TDTPACLLRWQNSSVHRAYAGFF*KFLLGL Trigger: AAGCCCAAGAAGGAATTTGCAGAAAAAGCCGGCATA...TGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGTGTATCCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTGTTGACTAAGCACCTAGGAAAGAGAATGCAGTTGACCATGATTAGTTCAAGCGAGGAGCTGGGGTaGAGTTTCCCCAGCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLTKHLGKRMQLTMISSSEELG*SFPSCR Trigger: ACGACAGCTGGGGAAACTGCACCCCAGCTCCTCGCT...TGAACTAATCATGGTCAACTGCATTCTCTTTCCTAGGTGCTTAGTCAACAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAAGCAGGTCCATCAACCACGGATACACCTGCCTGCCTACTCAGATGGCAGTCATCTTTCATTAACTaGTTAAAGAGATCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WQAGPSTTDTPACLLRWQSSFIN*LKRSPG Trigger: ACCTGGTGATCTCTTTAACCAGTTAATGAAAGATGA...CTGCCATCTGAGTAGGCAGGCAGGTGTATCCGTGGTTGATGGACCTGCTTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTCCAGGATCATCTTTCATTAACTaGTTAAAGAGATCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRRISEFEASLVYKVSPGSSFIN*LKRSPG Trigger: ACCTGGTGATCTCTTTAACCAGTTAATGAAAGATGA...TCCTGGACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | ATTACAGATGGCTGTGAGCCATCATGTGGTTGGCTGGGAATTGAACTCAGGACCAGGCAGTATAAGTATTaGCGTGTATCCATTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ITDGCEPSCGWLGIELRTRQYKY*RVSIGC Trigger: GCAGCCAATGGATACACGCCAATACTTATACTGCCT...GGTCCTGAGTTCAATTCCCAGCCAACCACATGATGGCTCACAGCCATCTGTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCATAAGACATAACATCCCCATAACCTaGAGCCATCCTTTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TCLPTQMAEFICSPSIRHNIPIT*SHPLKL Trigger: CAGCTTCAAAGGATGGCTCCAGGTTATGGGGATGTT...ATGTCTTATGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGACATTGAATCCCATTACAGATGGCTGTGAGCCATCATGTGGTTGGCTGAAGCCAGAGACACTTTaGAGCCCCTGTACTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KKTLNPITDGCEPSCGWLKPETL*SPCTED Trigger: GTCCTCAGTACAGGGGCTCCAAAGTGTCTCTGGCTT...CAGCCAACCACATGATGGCTCACAGCCATCTGTAATGGGATTCAATGTCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCATAAGACATTATGCCGGCTTTTTCTaGAAATTCCTTCTTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TCLPTQMAEFICSPSIRHYAGFF*KFLLGL Trigger: AAGCCCAAGAAGGAATTTGCAGAAAAAGCCGGCATA...ATGTCTTATGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCCAGCCCCCGAATGTTTGTGATTAAACGGACAAATAAATCTTTTATATTAAGCGAGGAGCTGGGGTaGAGTTTCCCCAGCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSPRMFVIKRTNKSFILSEELG*SFPSCR Trigger: ACGACAGCTGGGGAAACTGCACCCCAGCTCCTCGCT...TAATATAAAAGATTTATTTGTCCGTTTAATCACAAACATTCGGGGGCTGGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR GCA 90 bp | CATCTGTTCACCGAGCATAAGACATCTGATACCCAGCCCTTTACAAAAAGGTTCGAGACTACGCAGACTTaGGCGATGTCATCATATTCG | + |
|
Preference number: 4 (lower is better) Translates to: HLFTEHKTSDTQPFTKRFETTQT*AMSSYS Trigger: CGAATATGATGACATCGCGCAAGTCTGCGTAGTCTC...GAACCTTTTTGTAAAGGGCTGGGTATCAGATGTCTTATGCTCGGTGAACAGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | CATCTGTTCACCGAGCATAAGACATCTGATACCCAGCCCTTTACAAAAAGGTTCCAGCCACAGCAGCATTaGAGGCTGAAAGGTTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HLFTEHKTSDTQPFTKRFQPQQH*RLKGLN Trigger: GTTTAAACCTTTCAGCCTCCAATGCTGCTGTGGCTG...GAACCTTTTTGTAAAGGGCTGGGTATCAGATGTCTTATGCTCGGTGAACAGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | GGATACACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCATACTGCAAATTCCTTCTTaGGCTTTAGGCAGTATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GYTCLPTQMAEFICSPSILQIPS*ALGSIS Trigger: ACTTATACTGCCTAAAGCCCAAGAAGGAATTTGCAG...TATGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGTGTATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | CATCTGTTCACCGAGCATAAGACATCTGATACCCAGCCCTTTACAAAAAGGTTCTCCCACACCAGTGGATaGAATTGGTGTTGCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: HLFTEHKTSDTQPFTKRFSHTSG*NWCCTS Trigger: AGATGTGCAACACCAATTCCATCCACTGGTGTGGGA...GAACCTTTTTGTAAAGGGCTGGGTATCAGATGTCTTATGCTCGGTGAACAGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGACATTGAATCCCATTACAGATGGCTGTGAGCCATCATGTGGTTGGCTGTCCCACACCAGTGGATaGAATTGGTGTTGCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: KKTLNPITDGCEPSCGWLSHTSG*NWCCTS Trigger: AGATGTGCAACACCAATTCCATCCACTGGTGTGGGA...CAGCCAACCACATGATGGCTCACAGCCATCTGTAATGGGATTCAATGTCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCAAGCCAGAGACACTTTaGAGCCCCTGTACTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVFTTDHCTKLTKYREHFKPETL*SPCTED Trigger: GTCCTCAGTACAGGGGCTCCAAAGTGTCTCTGGCTT...GAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTGTAAGCCAGAGACACTTTaGAGCCCCTGTACTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VFTTDHCTKLTKYREHFCKPETL*SPCTED Trigger: GTCCTCAGTACAGGGGCTCCAAAGTGTCTCTGGCTT...ACAGAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR TCA 90 bp | GGATACACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCATATGTCATTGTGAACACTaGTATAACTGGAAAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GYTCLPTQMAEFICSPSICHCEH*YNWKRS Trigger: AGACCTTTTCCAGTTATATCAGTGTTCACAATGACA...TATGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGTGTATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCATAAGACATTTACTTCATGGTGTATaGCGTCATCAATACAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TCLPTQMAEFICSPSIRHLLHGV*RHQYSS Trigger: ACTGCTGTATTGATGACGTCATACACCATGAAGTAA...ATGTCTTATGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTGTGGATGGAATTGGTGTTaGACATCTCCAGCACGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VFTTDHCTKLTKYREHFCGWNWC*TSPARG Trigger: ACCTCGTGCTGGAGATGTGCAACACCAATTCCATCC...ACAGAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR GCA 90 bp | AGCATAAGACATCTGATACCCAGCCCTTTACAAAAAGGTTCGCTGACTGCTTTTGAGACTACGCAGACTTaGGCGATGTCATCATATTCG | + |
|
Preference number: 4 (lower is better) Translates to: SIRHLIPSPLQKGSLTAFETTQT*AMSSYS Trigger: CGAATATGATGACATCGCGCAAGTCTGCGTAGTCTC...AAAAGCAGTCAGCGAACCTTTTTGTAAAGGGCTGGGTATCAGATGTCTTATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | GAATTCATCTGTTCACCGAGCATAAGACATCTGATACCCAGCCCTTTACAAAAAGAGATCCCACACCAGTaGATGGAATTGGTGTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EFICSPSIRHLIPSPLQKEIPHQ*MELVLH Trigger: GTGCAACACCAATTCCATCCACTGGTGTGGGATCTC...TTTTTGTAAAGGGCTGGGTATCAGATGTCTTATGCTCGGTGAACAGATGAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCGAGATCCCACACCAGTaGATGGAATTGGTGTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVFTTDHCTKLTKYREHFEIPHQ*MELVLH Trigger: GTGCAACACCAATTCCATCCACTGGTGTGGGATCTC...GAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR GCA 90 bp | GAATTCATCTGTTCACCGAGCATAAGACATCTGATACCCAGCCCTTTACAAAAACGTGTATCCATTGGCTaGAAATATCCTCTGGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: EFICSPSIRHLIPSPLQKRVSIG*KYPLDP Trigger: TGGGTCCAGAGGATATTTGCAGCCAATGGATACACG...TTTTTGTAAAGGGCTGGGTATCAGATGTCTTATGCTCGGTGAACAGATGAATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTGTGAGACTACGCAGACTTaGGCGATGTCATCATATTCG | + |
|
Preference number: 4 (lower is better) Translates to: VFTTDHCTKLTKYREHFCETTQT*AMSSYS Trigger: CGAATATGATGACATCGCGCAAGTCTGCGTAGTCTC...ACAGAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCAACATCCCCATAACCTaGAGCCATCCTTTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVFTTDHCTKLTKYREHFNIPIT*SHPLKL Trigger: CAGCTTCAAAGGATGGCTCCAGGTTATGGGGATGTT...GAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCACCAGTGGATGGAATTaGTGTTGCACATCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVFTTDHCTKLTKYREHFTSGWN*CCTSPA Trigger: TGCTGGAGATGTGCAACACCAATTCCATCCACTGGT...GAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR CCA 90 bp | GAATTCATCTGTTCACCGAGCATAAGACATCTGATACCCAGCCCTTTACAAAAATCCCACACCAGTGGATaGAATTGGTGTTGCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: EFICSPSIRHLIPSPLQKSHTSG*NWCCTS Trigger: AGATGTGCAACACCAATTCCATCCACTGGTGTGGGA...TTTTTGTAAAGGGCTGGGTATCAGATGTCTTATGCTCGGTGAACAGATGAATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTGTTCCCACACCAGTGGATaGAATTGGTGTTGCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: VFTTDHCTKLTKYREHFCSHTSG*NWCCTS Trigger: AGATGTGCAACACCAATTCCATCCACTGGTGTGGGA...ACAGAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| 3UTR CAA 72 bp | GTTTCTCTGGCTGAATTGTTTTACACAGGCCTCTCTTaGTTGACTAAGCACCTAGGAAAGAGAATGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSLAELFYTGLS*LTKHLGKRMQL Trigger: CAACTGCATTCTCTTTCCTAGGTGCTTAGTCAACAAAGAGAGGCCTGTGTAAAACAATTCAGCCAGAGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR GCA 90 bp | TTGACTAAGCACCTAGGAAAGAGAATGCAGTTGACCATGATTAGTTCAACTAACGAGACTACGCAGACTTaGGCGATGTCATCATATTCG | + |
|
Preference number: 4 (lower is better) Translates to: LTKHLGKRMQLTMISSTNETTQT*AMSSYS Trigger: CGAATATGATGACATCGCGCAAGTCTGCGTAGTCTC...GTTAGTTGAACTAATCATGGTCAACTGCATTCTCTTTCCTAGGTGCTTAGTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | ACACTGTTGCTGTCTGTAGACACACCAGAAAAAGACATTGAATCCCATTACAGATTGGCGTGTATCCATTaGCTGCAAATATCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLLLSVDTPEKDIESHYRLACIH*LQISSG Trigger: TCCAGAGGATATTTGCAGCCAATGGATACACGCCAA...TCTGTAATGGGATTCAATGTCTTTTTCTGGTGTGTCTACAGACAGCAACAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | GAATTCATCTGTTCACCGAGCATAAGACATCTGATACCCAGCCCTTTACAAAAATTGGCGTGTATCCATTaGCTGCAAATATCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EFICSPSIRHLIPSPLQKLACIH*LQISSG Trigger: TCCAGAGGATATTTGCAGCCAATGGATACACGCCAA...TTTTTGTAAAGGGCTGGGTATCAGATGTCTTATGCTCGGTGAACAGATGAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTGTTTGGCGTGTATCCATTaGCTGCAAATATCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VFTTDHCTKLTKYREHFCLACIH*LQISSG Trigger: TCCAGAGGATATTTGCAGCCAATGGATACACGCCAA...ACAGAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR CCA 90 bp | GAATTCATCTGTTCACCGAGCATAAGACATCTGATACCCAGCCCTTTACAAAAAAGGCAGTATAAGTATTaGCGTGTATCCATTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EFICSPSIRHLIPSPLQKRQYKY*RVSIGC Trigger: GCAGCCAATGGATACACGCCAATACTTATACTGCCT...TTTTTGTAAAGGGCTGGGTATCAGATGTCTTATGCTCGGTGAACAGATGAATTC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCAGGCAGTATAAGTATTaGCGTGTATCCATTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVFTTDHCTKLTKYREHFRQYKY*RVSIGC Trigger: GCAGCCAATGGATACACGCCAATACTTATACTGCCT...GAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR CCA 90 bp | TTGACTAAGCACCTAGGAAAGAGAATGCAGTTGACCATGATTAGTTCAACTAACAACATCCCCATAACCTaGAGCCATCCTTTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTKHLGKRMQLTMISSTNNIPIT*SHPLKL Trigger: CAGCTTCAAAGGATGGCTCCAGGTTATGGGGATGTT...GTTAGTTGAACTAATCATGGTCAACTGCATTCTCTTTCCTAGGTGCTTAGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | TTGACTAAGCACCTAGGAAAGAGAATGCAGTTGACCATGATTAGTTCAACTAACACCAGTGGATGGAATTaGTGTTGCACATCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTKHLGKRMQLTMISSTNTSGWN*CCTSPA Trigger: TGCTGGAGATGTGCAACACCAATTCCATCCACTGGT...GTTAGTTGAACTAATCATGGTCAACTGCATTCTCTTTCCTAGGTGCTTAGTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR TCA 90 bp | GAATTCATCTGTTCACCGAGCATAAGACATCTGATACCCAGCCCTTTACAAAAATTAGAAATGTGTCAGTaGGTCTTAAGCCAGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: EFICSPSIRHLIPSPLQKLEMCQ*VLSQRH Trigger: GTGTCTCTGGCTTAAGACTCACTGACACATTTCTAA...TTTTTGTAAAGGGCTGGGTATCAGATGTCTTATGCTCGGTGAACAGATGAATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTGTTTAGAAATGTGTCAGTaGGTCTTAAGCCAGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: VFTTDHCTKLTKYREHFCLEMCQ*VLSQRH Trigger: GTGTCTCTGGCTTAAGACTCACTGACACATTTCTAA...ACAGAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR GCA 90 bp | CTTGTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTATGCCGGCTTTTTCTaGAAATTCCTTCTTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVFTTDHCTKLTKYREHFYAGFF*KFLLGL Trigger: AAGCCCAAGAAGGAATTTGCAGAAAAAGCCGGCATA...GAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAACAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR CCA 90 bp | TTGACTAAGCACCTAGGAAAGAGAATGCAGTTGACCATGATTAGTTCAACTAACTTGGCGTGTATCCATTaGCTGCAAATATCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTKHLGKRMQLTMISSTNLACIH*LQISSG Trigger: TCCAGAGGATATTTGCAGCCAATGGATACACGCCAA...GTTAGTTGAACTAATCATGGTCAACTGCATTCTCTTTCCTAGGTGCTTAGTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAGCCCCCGAATGTTTGTGATTAAACGGACAAATAAATCTTTTATATTAGAGATCCCACACCAGTaGATGGAATTGGTGTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSSPRMFVIKRTNKSFILEIPHQ*MELVLH Trigger: GTGCAACACCAATTCCATCCACTGGTGTGGGATCTC...TAATATAAAAGATTTATTTGTCCGTTTAATCACAAACATTCGGGGGCTGGAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTGTCTGCAAATTCCTTCTTaGGCTTTAGGCAGTATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFTTDHCTKLTKYREHFCLQIPS*ALGSIS Trigger: ACTTATACTGCCTAAAGCCCAAGAAGGAATTTGCAG...ACAGAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| 3UTR CAA 72 bp | CATGGGTTTTGTTTCCCTAATAAACAGGGAAGCGTTTaGATGCATACCTATTGCAAAGCTGTTGTAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HGFCFPNKQGSV*MHTYCKAVVSL Trigger: AAGGCTTACAACAGCTTTGCAATAGGTATGCATCAAAACGCTTCCCTGTTTATTAGGGAAACAAAACCCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTGTTGTCATTGTGAACACTaGTATAACTGGAAAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFTTDHCTKLTKYREHFCCHCEH*YNWKRS Trigger: AGACCTTTTCCAGTTATATCAGTGTTCACAATGACA...ACAGAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR TCA 90 bp | TTGAAAACAACTGAAATGTTTCTCTGGCTGAATTGTTTTACACAGGCCTCTCTTTTAGAAATGTGTCAGTaGGTCTTAAGCCAGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: LKTTEMFLWLNCFTQASLLEMCQ*VLSQRH Trigger: GTGTCTCTGGCTTAAGACTCACTGACACATTTCTAA...AAGAGAGGCCTGTGTAAAACAATTCAGCCAGAGAAACATTTCAGTTGTTTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | AGCATAAGACATCTGATACCCAGCCCTTTACAAAAAGGTTCGCTGACTGCTTTTTCATCTTTCATTAACTaGTTAAAGAGATCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SIRHLIPSPLQKGSLTAFSSFIN*LKRSPG Trigger: ACCTGGTGATCTCTTTAACCAGTTAATGAAAGATGA...AAAAGCAGTCAGCGAACCTTTTTGTAAAGGGCTGGGTATCAGATGTCTTATGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTGTACTGAGGTCACTCTCTaGATTGTAAAATTTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFTTDHCTKLTKYREHFCTEVTL*IVKFGF Trigger: AAAACCAAATTTTACAATGCAGAGAGTGACCTCAGT...ACAGAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCCAGCCCCCGAATGTTTGTGATTAAACGGACAAATAAATCTTTTATATTATATGCCGGCTTTTTCTaGAAATTCCTTCTTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSSPRMFVIKRTNKSFILYAGFF*KFLLGL Trigger: AAGCCCAAGAAGGAATTTGCAGAAAAAGCCGGCATA...TAATATAAAAGATTTATTTGTCCGTTTAATCACAAACATTCGGGGGCTGGAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTGTTCATCTTTCATTAACTaGTTAAAGAGATCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VFTTDHCTKLTKYREHFCSSFIN*LKRSPG Trigger: ACCTGGTGATCTCTTTAACCAGTTAATGAAAGATGA...ACAGAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCCAGCCCCCGAATGTTTGTGATTAAACGGACAAATAAATCTTTTATATTAACTGAGGTCACTCTCTaGATTGTAAAATTTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSSPRMFVIKRTNKSFILTEVTL*IVKFGF Trigger: AAAACCAAATTTTACAATGCAGAGAGTGACCTCAGT...TAATATAAAAGATTTATTTGTCCGTTTAATCACAAACATTCGGGGGCTGGAGAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141557.8 |
||
| CDS CCA 90 bp | CCTGTACTGAGGACAGGAGCGTCAGGGCCAGGCAGAGCGAGGAGCTaGGGTGCAGTTTCCCCAGCTGTCGTCCTGAGATCCCACACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PVLRTGASGPGRARS*GAVSPAVVLRSHTS Trigger: ACTGGTGTGGGATCTCAGGACGACAGCTGGGGAAACTGCACCCCAGCTCCTCGCTCTGCCTGGCCCTGACGCTCCTGTCCTCAGTACAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS CCA 90 bp | CTGGGGTGCAGTTTCCCCAGCTGTCGTCCTGAGATCCCACACCAGTaGATGGAATTGGTGTTGCACATCTCCAGCACGAGGTCCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: LGCSFPSCRPEIPHQ*MELVLHISSTRSII Trigger: GATGATGGACCTCGTGCTGGAGATGTGCAACACCAATTCCATCCACTGGTGTGGGATCTCAGGACGACAGCTGGGGAAACTGCACCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS GCA 90 bp | CCAGCTGTCGTCCTGAGATCCCACACCAGTGGATGGAATTGGTGTTaGACATCTCCAGCACGAGGTCCATCATCCTCTCACTGCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PAVVLRSHTSGWNWC*TSPARGPSSSHCCS Trigger: ACTGCAGCAGTGAGAGGATGATGGACCTCGTGCTGGAGATGTGCAACACCAATTCCATCCACTGGTGTGGGATCTCAGGACGACAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS CCA 90 bp | GTTTCCCCAGCTGTCGTCCTGAGATCCCACACCAGTGGATGGAATTaGTGTTGCACATCTCCAGCACGAGGTCCATCATCCTCTCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSPAVVLRSHTSGWN*CCTSPARGPSSSHC Trigger: GCAGTGAGAGGATGATGGACCTCGTGCTGGAGATGTGCAACACCAATTCCATCCACTGGTGTGGGATCTCAGGACGACAGCTGGGGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS CCA 90 bp | GGTGCAGTTTCCCCAGCTGTCGTCCTGAGATCCCACACCAGTGGATaGAATTGGTGTTGCACATCTCCAGCACGAGGTCCATCATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GAVSPAVVLRSHTSG*NWCCTSPARGPSSS Trigger: AGAGGATGATGGACCTCGTGCTGGAGATGTGCAACACCAATTCCATCCACTGGTGTGGGATCTCAGGACGACAGCTGGGGAAACTGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS GCA 90 bp | CCAGCTGTCGTCCTGAGATCCCACACCAGTGGATGGAATTGGTGTTaGACATCTCCAGCACGAGGTCCATCATCCTCTCACTGCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PAVVLRSHTSGWNWC*TSPARGPSSSHCSL Trigger: CAAACTGCAGTGAGAGGATGATGGACCTCGTGCTGGAGATGTGCAACACCAATTCCATCCACTGGTGTGGGATCTCAGGACGACAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141557.8 |
||
| CDS-3UTR CAA 90 bp | GGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGCGCTCTTAATTGCTCACCAGTGGATGGAATaGGTGTTGCACATCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GWELNSGPLEEQSALLIAHQWME*VLHISS Trigger: GCTGGAGATGTGCAACACCAATTCCATCCACTGGTG...AGCAATTAAGAGCGCTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CAA 90 bp | ACGGATACACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCATTTCTCCACCCTGCGTaGTGTAACTCACAGCACACA | + |
|
Preference number: 5 (lower is better) Translates to: TDTPACLLRWQNSSVHRAFLHPA*CNSQHT Trigger: TGTGTGCTGTGAGTTACACAACGCAGGGTGGAGAAA...TGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGTGTATCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CAA 90 bp | GGATACACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCATACACCAGTGGATGGAATaGGTGTTGCACATCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GYTCLPTQMAEFICSPSIHQWME*VLHISS Trigger: GCTGGAGATGTGCAACACCAATTCCATCCACTGGTG...TATGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGTGTATCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CAA 90 bp | ACGGATACACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCATCAGCCACAGCAGCATaGGAGGCTGAAAGGTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: TDTPACLLRWQNSSVHRASATAA*EAERFK Trigger: TTTAAACCTTTCAGCCTCCAATGCTGCTGTGGCTGA...TGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGTGTATCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CAA 90 bp | ACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCATAAGACATTGGATGGAATTGGTGTaGCACATCTCCAGCACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TCLPTQMAEFICSPSIRHWMELV*HISSTR Trigger: CCTCGTGCTGGAGATGTGCAACACCAATTCCATCCA...ATGTCTTATGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CAA 90 bp | GGATACACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCATAATTGGCGTGTATCCATaGGCTGCAAATATCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GYTCLPTQMAEFICSPSIIGVYP*AANILW Trigger: CCAGAGGATATTTGCAGCCAATGGATACACGCCAAT...TATGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGTGTATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CAA 90 bp | CATCTGTTCACCGAGCATAAGACATCTGATACCCAGCCCTTTACAAAAAGGTTCTCAGCCACAGCAGCATaGGAGGCTGAAAGGTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: HLFTEHKTSDTQPFTKRFSATAA*EAERFK Trigger: TTTAAACCTTTCAGCCTCCAATGCTGCTGTGGCTGA...GAACCTTTTTGTAAAGGGCTGGGTATCAGATGTCTTATGCTCGGTGAACAGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTGTTGGATGGAATTGGTGTaGCACATCTCCAGCACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VFTTDHCTKLTKYREHFCWMELV*HISSTR Trigger: CCTCGTGCTGGAGATGTGCAACACCAATTCCATCCA...ACAGAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR CAA 90 bp | ACACTGTTGCTGTCTGTAGACACACCAGAAAAAGACATTGAATCCCATTACAGATGGATGGAATTGGTGTaGCACATCTCCAGCACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TLLLSVDTPEKDIESHYRWMELV*HISSTR Trigger: CCTCGTGCTGGAGATGTGCAACACCAATTCCATCCA...TCTGTAATGGGATTCAATGTCTTTTTCTGGTGTGTCTACAGACAGCAACAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCCACCAGTGGATGGAATaGGTGTTGCACATCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LVFTTDHCTKLTKYREHFHQWME*VLHISS Trigger: GCTGGAGATGTGCAACACCAATTCCATCCACTGGTG...GAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR CAA 90 bp | GTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTGTCACCAGTGGATGGAATaGGTGTTGCACATCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VFTTDHCTKLTKYREHFCHQWME*VLHISS Trigger: GCTGGAGATGTGCAACACCAATTCCATCCACTGGTG...ACAGAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS GCA 90 bp | TTCTTGGGCTTTAGGCAGTATAAGTATTGGCGTGTATCCATTGGCTaGAAATATCCTCTGGACCCAAATGTAGATATGCATTCTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FLGFRQYKYWRVSIG*KYPLDPNVDMHSPA Trigger: GGCTGGAGAATGCATATCTACATTTGGGTCCAGAGGATATTTGCAGCCAATGGATACACGCCAATACTTATACTGCCTAAAGCCCAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR CAA 90 bp | ATTACAGATGGCTGTGAGCCATCATGTGGTTGGCTGGGAATTGAACTCAGGACCCTGCACCATTTACAGTaGAAGGATCATCTTTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: ITDGCEPSCGWLGIELRTLHHLQ*KDHLSL Trigger: TAATGAAAGATGATCCTTCAACTGTAAATGGTGCAG...GGTCCTGAGTTCAATTCCCAGCCAACCACATGATGGCTCACAGCCATCTGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CAA 90 bp | GAATTCATCTGTTCACCGAGCATAAGACATCTGATACCCAGCCCTTTACAAAAATTTCTCCACCCTGCGTaGTGTAACTCACAGCACACA | + |
|
Preference number: 5 (lower is better) Translates to: EFICSPSIRHLIPSPLQKFLHPA*CNSQHT Trigger: TGTGTGCTGTGAGTTACACAACGCAGGGTGGAGAAA...TTTTTGTAAAGGGCTGGGTATCAGATGTCTTATGCTCGGTGAACAGATGAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTTTCTCCACCCTGCGTaGTGTAACTCACAGCACACA | + |
|
Preference number: 5 (lower is better) Translates to: LVFTTDHCTKLTKYREHFFLHPA*CNSQHT Trigger: TGTGTGCTGTGAGTTACACAACGCAGGGTGGAGAAA...GAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR CAA 90 bp | AGCATAAGACATCTGATACCCAGCCCTTTACAAAAAGGTTCGCTGACTGCTTTTATTGGCGTGTATCCATaGGCTGCAAATATCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SIRHLIPSPLQKGSLTAFIGVYP*AANILW Trigger: CCAGAGGATATTTGCAGCCAATGGATACACGCCAAT...AAAAGCAGTCAGCGAACCTTTTTGTAAAGGGCTGGGTATCAGATGTCTTATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CAA 90 bp | ACCTGCCTGCCTACTCAGATGGCAGAATTCATCTGTTCACCGAGCATAAGACATCTGCACCATTTACAGTaGAAGGATCATCTTTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: TCLPTQMAEFICSPSIRHLHHLQ*KDHLSL Trigger: TAATGAAAGATGATCCTTCAACTGTAAATGGTGCAG...ATGTCTTATGCTCGGTGAACAGATGAATTCTGCCATCTGAGTAGGCAGGCAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTCAGCCACAGCAGCATaGGAGGCTGAAAGGTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LVFTTDHCTKLTKYREHFSATAA*EAERFK Trigger: TTTAAACCTTTCAGCCTCCAATGCTGCTGTGGCTGA...GAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR CAA 90 bp | TTGACTAAGCACCTAGGAAAGAGAATGCAGTTGACCATGATTAGTTCAACTAACTTTCTCCACCCTGCGTaGTGTAACTCACAGCACACA | + |
|
Preference number: 5 (lower is better) Translates to: LTKHLGKRMQLTMISSTNFLHPA*CNSQHT Trigger: TGTGTGCTGTGAGTTACACAACGCAGGGTGGAGAAA...GTTAGTTGAACTAATCATGGTCAACTGCATTCTCTTTCCTAGGTGCTTAGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTGTATTGGCGTGTATCCATaGGCTGCAAATATCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VFTTDHCTKLTKYREHFCIGVYP*AANILW Trigger: CCAGAGGATATTTGCAGCCAATGGATACACGCCAAT...ACAGAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR CAA 90 bp | AGCATAAGACATCTGATACCCAGCCCTTTACAAAAAGGTTCGCTGACTGCTTTTTCTGCAAATTCCTTCTaGGGCTTTAGGCAGTATAAG | + |
|
Preference number: 5 (lower is better) Translates to: SIRHLIPSPLQKGSLTAFSANSF*GFRQYK Trigger: CTTATACTGCCTAAAGCCCAAGAAGGAATTTGCAGA...AAAAGCAGTCAGCGAACCTTTTTGTAAAGGGCTGGGTATCAGATGTCTTATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS CCA 90 bp | TGCAAATATCCTCTGGACCCAAATGTAGATATGCATTCTCCAGCCTaGGTCACCGAGTTTAATTCTGTTACATTGTACATTATTGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: CKYPLDPNVDMHSPA*VTEFNSVTLYIIDG Trigger: GCCATCAATAATGTACAATGTAACAGAATTAAACTCGGTGACCCAGGCTGGAGAATGCATATCTACATTTGGGTCCAGAGGATATTTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR CAA 90 bp | TTGAAAACAACTGAAATGTTTCTCTGGCTGAATTGTTTTACACAGGCCTCTCTTTCAGCCACAGCAGCATaGGAGGCTGAAAGGTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LKTTEMFLWLNCFTQASLSATAA*EAERFK Trigger: TTTAAACCTTTCAGCCTCCAATGCTGCTGTGGCTGA...AAGAGAGGCCTGTGTAAAACAATTCAGCCAGAGAAACATTTCAGTTGTTTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTCTGCAAATTCCTTCTaGGGCTTTAGGCAGTATAAG | + |
|
Preference number: 5 (lower is better) Translates to: LVFTTDHCTKLTKYREHFSANSF*GFRQYK Trigger: CTTATACTGCCTAAAGCCCAAGAAGGAATTTGCAGA...GAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR CAA 90 bp | AGCATAAGACATCTGATACCCAGCCCTTTACAAAAAGGTTCGCTGACTGCTTTTCACGTTACAGGAATATaGGTGAACAAAGTAGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SIRHLIPSPLQKGSLTAFHVTGI*VNKVGL Trigger: TAAACCTACTTTGTTCACCAATATTCCTGTAACGTG...AAAAGCAGTCAGCGAACCTTTTTGTAAAGGGCTGGGTATCAGATGTCTTATGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCCAGCCCCCGAATGTTTGTGATTAAACGGACAAATAAATCTTTTATATTAATTGGCGTGTATCCATaGGCTGCAAATATCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSSPRMFVIKRTNKSFILIGVYP*AANILW Trigger: CCAGAGGATATTTGCAGCCAATGGATACACGCCAAT...TAATATAAAAGATTTATTTGTCCGTTTAATCACAAACATTCGGGGGCTGGAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTGTTGACTAAGCACCTAGGAAAGAGAATGCAGTTGACCATGATTAGTTCATCTGCAAATTCCTTCTaGGGCTTTAGGCAGTATAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLTKHLGKRMQLTMISSSANSF*GFRQYK Trigger: CTTATACTGCCTAAAGCCCAAGAAGGAATTTGCAGA...TGAACTAATCATGGTCAACTGCATTCTCTTTCCTAGGTGCTTAGTCAACAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS GCA 90 bp | TGCTTCAAGAAATACTTCATCAGTCACAGAACTGAGGTCACTCTCTaGATTGTAAAATTTGGTTTTCACATCCAATGGTTTGAGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: CFKKYFISHRTEVTL*IVKFGFHIQWFENL Trigger: CAGGTTCTCAAACCATTGGATGTGAAAACCAAATTTTACAATGCAGAGAGTGACCTCAGTTCTGTGACTGATGAAGTATTTCTTGAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTCACTACTGATCACTGCACAAAGCTGACGAAATACAGAGAGCATTTCTGTCACGTTACAGGAATATaGGTGAACAAAGTAGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VFTTDHCTKLTKYREHFCHVTGI*VNKVGL Trigger: TAAACCTACTTTGTTCACCAATATTCCTGTAACGTG...ACAGAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS-3UTR CAA 90 bp | TTGAAAACAACTGAAATGTTTCTCTGGCTGAATTGTTTTACACAGGCCTCTCTTTCTGCAAATTCCTTCTaGGGCTTTAGGCAGTATAAG | + |
|
Preference number: 5 (lower is better) Translates to: LKTTEMFLWLNCFTQASLSANSF*GFRQYK Trigger: CTTATACTGCCTAAAGCCCAAGAAGGAATTTGCAGA...AAGAGAGGCCTGTGTAAAACAATTCAGCCAGAGAAACATTTCAGTTGTTTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS-3UTR CAA 90 bp | TTGACTAAGCACCTAGGAAAGAGAATGCAGTTGACCATGATTAGTTCAACTAACCACGTTACAGGAATATaGGTGAACAAAGTAGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LTKHLGKRMQLTMISSTNHVTGI*VNKVGL Trigger: TAAACCTACTTTGTTCACCAATATTCCTGTAACGTG...GTTAGTTGAACTAATCATGGTCAACTGCATTCTCTTTCCTAGGTGCTTAGTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 |
||
| CDS TCA 90 bp | TCTAGTGAAACTTTCTCCATAAACATTGGTGAGGTTGTAATATTCTaGATTTGTGCTTCAAGAAATACTTCATCAGTCACAGAACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSETFSINIGEVVIF*ICASRNTSSVTELR Trigger: CCTCAGTTCTGTGACTGATGAAGTATTTCTTGAAGCACAAATTCAGAATATTACAACCTCACCAATGTTTATGGAGAAAGTTTCACTAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 |
||
| CDS TCA 72 bp | CGAGGAGCTGGGGTGCAGTTTCCCCAGCTGTCGTCCTaGGATCCCACACCAGTGGATGGAATTGGTGTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RGAGVQFPQLSS*DPTPVDGIGVA Trigger: TGCAACACCAATTCCATCCACTGGTGTGGGATCTCAGGACGACAGCTGGGGAAACTGCACCCCAGCTCCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS CAA 90 bp | CCCAGCTGTCGTCCTGAGATCCCACACCAGTGGATGGAATTGGTGTaGCACATCTCCAGCACGAGGTCCATCATCCTCTCACTGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSCRPEIPHQWMELV*HISSTRSIILSLLQ Trigger: CTGCAGCAGTGAGAGGATGATGGACCTCGTGCTGGAGATGTGCAACACCAATTCCATCCACTGGTGTGGGATCTCAGGACGACAGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022224.16 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS CCA 72 bp | GCTGTCGTCCTGAGATCCCACACCAGTGGATGGAATTaGTGTTGCACATCTCCAGCACGAGGTCCATCATCC | + |
|
Preference number: 6 (lower is better) Translates to: AVVLRSHTSGWN*CCTSPARGPSS Trigger: GGATGATGGACCTCGTGCTGGAGATGTGCAACACCAATTCCATCCACTGGTGTGGGATCTCAGGACGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS CAA 90 bp | AGTTTCCCCAGCTGTCGTCCTGAGATCCCACACCAGTGGATGGAATaGGTGTTGCACATCTCCAGCACGAGGTCCATCATCCTCTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SFPSCRPEIPHQWME*VLHISSTRSIILSL Trigger: CAGTGAGAGGATGATGGACCTCGTGCTGGAGATGTGCAACACCAATTCCATCCACTGGTGTGGGATCTCAGGACGACAGCTGGGGAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS CAA 90 bp | CCCAGCTGTCGTCCTGAGATCCCACACCAGTGGATGGAATTGGTGTaGCACATCTCCAGCACGAGGTCCATCATCCTCTCACTGCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PSCRPEIPHQWMELV*HISSTRSIILSLQF Trigger: AAACTGCAGTGAGAGGATGATGGACCTCGTGCTGGAGATGTGCAACACCAATTCCATCCACTGGTGTGGGATCTCAGGACGACAGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141557.8 |
||
| CDS GCA 72 bp | GTCCTGAGATCCCACACCAGTGGATGGAATTGGTGTTaGACATCTCCAGCACGAGGTCCATCATCCTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: VLRSHTSGWNWC*TSPARGPSSSH Trigger: GTGAGAGGATGATGGACCTCGTGCTGGAGATGTGCAACACCAATTCCATCCACTGGTGTGGGATCTCAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS CAA 72 bp | CGTCCTGAGATCCCACACCAGTGGATGGAATTGGTGTaGCACATCTCCAGCACGAGGTCCATCATCCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RPEIPHQWMELV*HISSTRSIILS Trigger: TGAGAGGATGATGGACCTCGTGCTGGAGATGTGCAACACCAATTCCATCCACTGGTGTGGGATCTCAGGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS CAA 72 bp | AGCTGTCGTCCTGAGATCCCACACCAGTGGATGGAATaGGTGTTGCACATCTCCAGCACGAGGTCCATCATC | + |
|
Preference number: 6 (lower is better) Translates to: SCRPEIPHQWME*VLHISSTRSII Trigger: GATGATGGACCTCGTGCTGGAGATGTGCAACACCAATTCCATCCACTGGTGTGGGATCTCAGGACGACAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS CAA 90 bp | ACTGTCACTCCCTTAATTATGCCGGCTTTTTCTGCAAATTCCTTCTaGGGCTTTAGGCAGTATAAGTATTGGCGTGTATCCATTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TVTPLIMPAFSANSF*GFRQYKYWRVSIGC Trigger: GCAGCCAATGGATACACGCCAATACTTATACTGCCTAAAGCCCAAGAAGGAATTTGCAGAAAAAGCCGGCATAATTAAGGGAGTGACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS CCA 72 bp | GCAAATTCCTTCTTGGGCTTTAGGCAGTATAAGTATTaGCGTGTATCCATTGGCTGCAAATATCCTCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ANSFLGFRQYKY*RVSIGCKYPLD Trigger: GTCCAGAGGATATTTGCAGCCAATGGATACACGCCAATACTTATACTGCCTAAAGCCCAAGAAGGAATTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS CCA 72 bp | CCTCTGGACCCAAATGTAGATATGCATTCTCCAGCCTaGGTCACCGAGTTTAATTCTGTTACATTGTACATT | + |
|
Preference number: 6 (lower is better) Translates to: PLDPNVDMHSPA*VTEFNSVTLYI Trigger: AATGTACAATGTAACAGAATTAAACTCGGTGACCCAGGCTGGAGAATGCATATCTACATTTGGGTCCAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS CAA 72 bp | CCCTTAATTATGCCGGCTTTTTCTGCAAATTCCTTCTaGGGCTTTAGGCAGTATAAGTATTGGCGTGTATCC | + |
|
Preference number: 6 (lower is better) Translates to: PLIMPAFSANSF*GFRQYKYWRVS Trigger: GGATACACGCCAATACTTATACTGCCTAAAGCCCAAGAAGGAATTTGCAGAAAAAGCCGGCATAATTAAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS CAA 72 bp | TCTCCAGCCTGGGTCACCGAGTTTAATTCTGTTACATaGTACATTATTGATGGCTCTAGTGAAACTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SPAWVTEFNSVT*YIIDGSSETFS Trigger: GGAGAAAGTTTCACTAGAGCCATCAATAATGTACAATGTAACAGAATTAAACTCGGTGACCCAGGCTGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS CAA 90 bp | AGAACTCGTCTGCAGATCCGCCTTCACCAATATATCTTTTACAACTaGATTGCTGTCATTGTGAACACTGATATAACTGGAAAAGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RTRLQIRLHQYIFYN*IAVIVNTDITGKGL Trigger: GAGACCTTTTCCAGTTATATCAGTGTTCACAATGACAGCAATCAAGTTGTAAAAGATATATTGGTGAAGGCGGATCTGCAGACGAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS CAA 72 bp | CTGCAGATCCGCCTTCACCAATATATCTTTTACAACTaGATTGCTGTCATTGTGAACACTGATATAACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LQIRLHQYIFYN*IAVIVNTDITG Trigger: TCCAGTTATATCAGTGTTCACAATGACAGCAATCAAGTTGTAAAAGATATATTGGTGAAGGCGGATCTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||
| CDS CAA 90 bp | GATATGCATTCTCCAGCCTGGGTCACCGAGTTTAATTCTGTTACATaGTACATTATTGATGGCTCTAGTGAAACTTTCTCCATAAACATT | + |
|
Preference number: 6 (lower is better) Translates to: DMHSPAWVTEFNSVT*YIIDGSSETFSINI Trigger: AATGTTTATGGAGAAAGTTTCACTAGAGCCATCAATAATGTACAATGTAACAGAATTAAACTCGGTGACCCAGGCTGGAGAATGCATATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022224.16 ENSMUST00000141557.8 ENSMUST00000144060.8 ENSMUST00000179891.2 |
||