Pregenerated sensors for TRAPPC12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020628Ensembl transcript IDs: ENSMUST00000020954.15, ENSMUST00000168129.10, ENSMUST00000170994.3
Found 315 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | AGTGGGCAGGCCGTGGGAAGAAACACTGAAGGTGAAGCGTGGGGCTaGAAGAGAGGGCTCCTGACGCGACACTTACCTATGCCAAGGAGG | + |
Preference number: 1 (lower is better) Translates to: SGQAVGRNTEGEAWG*KRGLLTRHLPMPRR Trigger: CCTCCTTGGCATAGGTAAGTGTCGCGTCAGGAGCCCTCTCTTCCAGCCCCACGCTTCACCTTCAGTGTTTCTTCCCACGGCCTGCCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR GCA 90 bp | GAATTATTAAATATCCCCACTGCTCCAGCATTGAGTGGTCACTGGTaGAGGCCACTAGTAGCGTTGCTCAGCACAGCAGGCCAGGCCTGG | + |
Preference number: 1 (lower is better) Translates to: ELLNIPTAPALSGHW*RPLVALLSTAGQAW Trigger: CCAGGCCTGGCCTGCTGTGCTGAGCAACGCTACTAGTGGCCTGCACCAGTGACCACTCAATGCTGGAGCAGTGGGGATATTTAATAATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR TCA 90 bp | CATCCCACAGCCGTGCATCCTGCCTTTAAAATGAGTGTTTTCACATaGATTAGGAAAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTA | + |
Preference number: 1 (lower is better) Translates to: HPTAVHPAFKMSVFT*IRKAGNGRPFPGPL Trigger: TAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTTTCCTAATTCATGTGAAAACACTCATTTTAAAGGCAGGATGCACGGCTGTGGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR TCA 90 bp | ATAGTGAGAACAGGCAATATTATTTACCAAACGAGTATTCAGAAGTaGCCAAAGAACAAGTTAGCTTCCATGAACAAACCAAGGGAACCC | + |
Preference number: 1 (lower is better) Translates to: IVRTGNIIYQTSIQK*PKNKLASMNKPREP Trigger: GGGTTCCCTTGGTTTGTTCATGGAAGCTAACTTGTTCTTTGGTCACTTCTGAATACTCGTTTGGTAAATAATATTGCCTGTTCTCACTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR TCA 90 bp | GCAATACTTTTGTTTGGGATATGGAGGGAGGAAGACAATGAACTGTaGTTGTTTAGGCCTATAGTGAGAACAGGCAATATTATTTACCAA | + |
Preference number: 1 (lower is better) Translates to: AILLFGIWREEDNEL*LFRPIVRTGNIIYQ Trigger: TTGGTAAATAATATTGCCTGTTCTCACTATAGGCCTAAACAATCACAGTTCATTGTCTTCCTCCCTCCATATCCCAAACAAAAGTATTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR-3UTR CCA 90 bp | GGAGAGAGGTACTTGGAACTGAGTGGGCAGGCCGTGGGAAGAAACACTGAAGGTCACACCTCTCTGGGCTaGGGCCCTGGCCTGCAGGAG | + |
Preference number: 2 (lower is better) Translates to: GERYLELSGQAVGRNTEGHTSLG*GPGLQE Trigger: CTCCTGCAGGCCAGGGCCCCAGCCCAGAGAGGTGTG...ACCTTCAGTGTTTCTTCCCACGGCCTGCCCACTCAGTTCCAAGTACCTCTCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR CAA 90 bp | ACTGCTCCAGCATTGAGTGGTCACTGGTGCAGGCCACTAGTAGCGTaGCTCAGCACAGCAGGCCAGGCCTGGTCAGGATGTACACTTCGG | + |
Preference number: 2 (lower is better) Translates to: TAPALSGHWCRPLVA*LSTAGQAWSGCTLR Trigger: CCGAAGTGTACATCCTGACCAGGCCTGGCCTGCTGTGCTGAGCAACGCTACTAGTGGCCTGCACCAGTGACCACTCAATGCTGGAGCAGT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR CAA 90 bp | GAGTTTTACAGTTATCTGAGTAGGTGGCTGGGCAGGTGTCCTAACTaGCTGCACACCTCTCTGGGCTGGGGCCCTGGCCTGCAGGAGCTG | + |
Preference number: 2 (lower is better) Translates to: EFYSYLSRWLGRCPN*LHTSLGWGPGLQEL Trigger: CAGCTCCTGCAGGCCAGGGCCCCAGCCCAGAGAGGTGTGCAGCAAGTTAGGACACCTGCCCAGCCACCTACTCAGATAACTGTAAAACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR-3UTR TCA 90 bp | ATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCAGCCGAAGGCATGCTCATCAAATGCTTTTACTaGCCCATCTGCTCAAGTGTC | + |
Preference number: 2 (lower is better) Translates to: MVGRSAGLRVAQPAEGMLIKCFY*PICSSV Trigger: GACACTTGAGCAGATGGGTCAGTAAAAGCATTTGAT...GAGCATGCCTTCGGCTGGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR-3UTR GCA 90 bp | GAAGAGCCAGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCGTTAAGCAATTCTCTTaGCTTCAGGCACAGGAGCGC | + |
Preference number: 2 (lower is better) Translates to: EEPAVLLMELGWNPCPQIVKQFS*LQAQER Trigger: GCGCTCCTGTGCCTGAAGGCAAGAGAATTGCTTAAC...GATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR-3UTR TCA 90 bp | CCCTGCTTGACTCTGTATACAGCCCCTACCACTTGCTTGCCACAATATTTACACCTGCAGGAGCTGTCATaGGTGAGGGCTTGCTGTAGA | + |
Preference number: 2 (lower is better) Translates to: PCLTLYTAPTTCLPQYLHLQELS*VRACCR Trigger: TCTACAGCAAGCCCTCACTCATGACAGCTCCTGCAG...GTGTAAATATTGTGGCAAGCAAGTGGTAGGGGCTGTATACAGAGTCAAGCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR CAA 90 bp | AGTGACTTTGGCACCCTGCTTGACTCTGTATACAGCCCCTACCACTaGCTTGCCACAATATTTACACAGGCCATGACCCCTGCTTTGAGT | + |
Preference number: 2 (lower is better) Translates to: SDFGTLLDSVYSPYH*LATIFTQAMTPALS Trigger: ACTCAAAGCAGGGGTCATGGCCTGTGTAAATATTGTGGCAAGCAAGTGGTAGGGGCTGTATACAGAGTCAAGCAGGGTGCCAAAGTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR-3UTR TCA 90 bp | AAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAATGCTGTGCCAGCCCATaGTGCTCCTTGCCCAGCTGT | + |
Preference number: 2 (lower is better) Translates to: KLGTEDHFQVLYILQSGKCCASP*CSLPSC Trigger: ACAGCTGGGCAAGGAGCATCATGGGCTGGCACAGCA...TTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR-3UTR TCA 90 bp | CTACCTGGGGGCCTTCTGGAAGGTAGGCTTCCCACAGGGAAGAGGCTTCTCAGAGTGCTCTTGGACACTTaGAGAATTATTAAATATCCC | + |
Preference number: 2 (lower is better) Translates to: LPGGLLEGRLPTGKRLLRVLLDT*RIIKYP Trigger: GGGATATTTAATAATTCTTCAAGTGTCCAAGAGCAC...TCTGAGAAGCCTCTTCCCTGTGGGAAGCCTACCTTCCAGAAGGCCCCCAGGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR-3UTR TCA 90 bp | AACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATATGCTGTGCCAGCCCATaGTGCTCCTTGCCCAGCTGT | + |
Preference number: 2 (lower is better) Translates to: NGRPFPGPLHFAKWKKRICCASP*CSLPSC Trigger: ACAGCTGGGCAAGGAGCATCATGGGCTGGCACAGCA...TATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR CAA 90 bp | CACAAACACTTTTCACTTTATTACAGACATGAAGAGCCAGCAGTTTaGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCGTGAGG | + |
Preference number: 2 (lower is better) Translates to: HKHFSLYYRHEEPAV*LMELGWNPCPQIVR Trigger: CCTCACGATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTCATGTCTGTAATAAAGTGAAAAGTGTTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR-3UTR GCA 90 bp | GGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATCTGCTCAAGTGTCTaGAGGTACAGAGACCTGGAG | + |
Preference number: 2 (lower is better) Translates to: GNGRPFPGPLHFAKWKKRICSSV*RYRDLE Trigger: CTCCAGGTCTCTGTACCTGCAGACACTTGAGCAGAT...GCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR-3UTR GCA 90 bp | TTTATTACAGACATGAAGAGCCAGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCAACAGGCAGTATTGTaGAACTGCATGGTAGGCAGG | + |
Preference number: 2 (lower is better) Translates to: FITDMKSQQFCLWSWGGTQQAVL*NCMVGR Trigger: CCTGCCTACCATGCAGTTGCACAATACTGCCTGTTG...GGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTCATGTCTGTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR-3UTR GCA 90 bp | AAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAACAACAGGCAGTATTGTaGAACTGCATGGTAGGCAGG | + |
Preference number: 2 (lower is better) Translates to: KLGTEDHFQVLYILQSGKQQAVL*NCMVGR Trigger: CCTGCCTACCATGCAGTTGCACAATACTGCCTGTTG...TTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR-3UTR TCA 90 bp | GAATTAGGAAAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAATATGTTCCCTGTTTCTaGATGCCATGCATATGGCTC | + |
Preference number: 2 (lower is better) Translates to: ELGKLGTEDHFQVLYILQYVPCF*MPCIWL Trigger: GAGCCATATGCATGGCATTCAGAAACAGGGAACATA...TTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTTTCCTAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR-3UTR CCA 90 bp | GGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCAGCAATACTTTTGTTTaGGATATGGAGGGAGGAAGA | + |
Preference number: 2 (lower is better) Translates to: GNGRPFPGPLHFAKWKKRSNTFV*DMEGGR Trigger: TCTTCCTCCCTCCATATCCCAAACAAAAGTATTGCT...GCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR-3UTR CCA 90 bp | AAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCAATACTTTTGTTTaGGATATGGAGGGAGGAAGA | + |
Preference number: 2 (lower is better) Translates to: KLGTEDHFQVLYILQSGKSNTFV*DMEGGR Trigger: TCTTCCTCCCTCCATATCCCAAACAAAAGTATTGCT...TTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR-3UTR TCA 90 bp | AACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATAACGAGTATTCAGAAGTaGCCAAAGAACAAGTTAGCT | + |
Preference number: 2 (lower is better) Translates to: NGRPFPGPLHFAKWKKRITSIQK*PKNKLA Trigger: AGCTAACTTGTTCTTTGGTCACTTCTGAATACTCGT...TATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR CCA 72 bp | GGCTGGGCAGGTGTCCTAACTTGCTGCACACCTCTCTaGGCTGGGGCCCTGGCCTGCAGGAGCTGTCATGAG | + |
Preference number: 3 (lower is better) Translates to: GWAGVLTCCTPL*AGALACRSCHE Trigger: CTCATGACAGCTCCTGCAGGCCAGGGCCCCAGCCCAGAGAGGTGTGCAGCAAGTTAGGACACCTGCCCAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR TCA 72 bp | GGGTGGAACCCATGCCCTCAGATCGTGAGGCACAAATaGTGCTCCGCTGCATCCCACAGCCGTGCATCCTGC | + |
Preference number: 3 (lower is better) Translates to: GWNPCPQIVRHK*CSAASHSRASC Trigger: GCAGGATGCACGGCTGTGGGATGCAGCGGAGCATCATTTGTGCCTCACGATCTGAGGGCATGGGTTCCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR TCA 72 bp | CTGAAGGTGAAGCGTGGGGCTGGAAGAGAGGGCTCCTaGCGCGACACTTACCTATGCCAAGGAGGCTCCCTA | + |
Preference number: 3 (lower is better) Translates to: LKVKRGAGREGS*RDTYLCQGGSL Trigger: TAGGGAGCCTCCTTGGCATAGGTAAGTGTCGCGTCAGGAGCCCTCTCTTCCAGCCCCACGCTTCACCTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR GCA 72 bp | ATGGCTCACCTTCACCAACAGGCAGTATTGTGCAACTaGATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCC | + |
Preference number: 3 (lower is better) Translates to: MAHLHQQAVLCN*MVGRSAGLRVA Trigger: GGCTACCCTCAGACCCGCTGACCTGCCTACCATGCAGTTGCACAATACTGCCTGTTGGTGAAGGTGAGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR CCA 72 bp | TCCCTAAAGCAGAGGGCTCTTCTGGACCCCAAGCCCTaGGCACAGACTAGATTGGATTGGAATACCAGCCTG | + |
Preference number: 3 (lower is better) Translates to: SLKQRALLDPKP*AQTRLDWNTSL Trigger: CAGGCTGGTATTCCAATCCAATCTAGTCTGTGCCCAGGGCTTGGGGTCCAGAAGAGCCCTCTGCTTTAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR CCA 72 bp | GTCTTACGAGCTCACCGCCGTGATCAAGTTCAGTCATaGAGAGAGGTACTTGGAACTGAGTGGGCAGGCCGT | + |
Preference number: 3 (lower is better) Translates to: VLRAHRRDQVQS*REVLGTEWAGR Trigger: ACGGCCTGCCCACTCAGTTCCAAGTACCTCTCTCCATGACTGAACTTGATCACGGCGGTGAGCTCGTAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR GCA 72 bp | ATGCATATGGCTCACCTTCACCAACAGGCAGTATTGTaGAACTGCATGGTAGGCAGGTCAGCGGGTCTGAGG | + |
Preference number: 3 (lower is better) Translates to: MHMAHLHQQAVL*NCMVGRSAGLR Trigger: CCTCAGACCCGCTGACCTGCCTACCATGCAGTTGCACAATACTGCCTGTTGGTGAAGGTGAGCCATATGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR CCA 72 bp | GCACGGGAAGGCTATGTGTCCAAGGGGAACGATGTCTaGAGTGACTTTGGCACCCTGCTTGACTCTGTATAC | + |
Preference number: 3 (lower is better) Translates to: AREGYVSKGNDV*SDFGTLLDSVY Trigger: GTATACAGAGTCAAGCAGGGTGCCAAAGTCACTCCAGACATCGTTCCCCTTGGACACATAGCCTTCCCGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR CCA 72 bp | TTAAATATCCCCACTGCTCCAGCATTGAGTGGTCACTaGTGCAGGCCACTAGTAGCGTTGCTCAGCACAGCA | + |
Preference number: 3 (lower is better) Translates to: LNIPTAPALSGH*CRPLVALLSTA Trigger: TGCTGTGCTGAGCAACGCTACTAGTGGCCTGCACCAGTGACCACTCAATGCTGGAGCAGTGGGGATATTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR CCA 72 bp | CAGGATGTACACTTCGGTGTTTCCACCCAGTTTGTGTaGCTCCAGATGTCCTCCTGTCTGTGTGTGCTTTTC | + |
Preference number: 3 (lower is better) Translates to: QDVHFGVSTQFV*LQMSSCLCVLF Trigger: GAAAAGCACACACAGACAGGAGGACATCTGGAGCCACACAAACTGGGTGGAAACACCGAAGTGTACATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR CCA 72 bp | GATTGGATTGGAATACCAGCCTGCACTCCTAAAATGTaGGTAATTCTCACTACACACCCACAGCACGGGAAG | + |
Preference number: 3 (lower is better) Translates to: DWIGIPACTPKM*VILTTHPQHGK Trigger: CTTCCCGTGCTGTGGGTGTGTAGTGAGAATTACCCACATTTTAGGAGTGCAGGCTGGTATTCCAATCCAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR-3UTR CAA 90 bp | TTCCCACAGGGAAGAGGCTTCTCAGAGTGCTCTTGGACACTTGAAGAATTATTAGTGTTTCCACCCAGTTaGTGTGGCTCCAGATGTCCT | + |
Preference number: 3 (lower is better) Translates to: FPQGRGFSECSWTLEELLVFPPS*CGSRCP Trigger: AGGACATCTGGAGCCACACAAACTGGGTGGAAACAC...TAATAATTCTTCAAGTGTCCAAGAGCACTCTGAGAAGCCTCTTCCCTGTGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR-3UTR CAA 90 bp | GAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATCACCAACAGGCAGTATaGTGCAACTGCATGGTAGGC | + |
Preference number: 3 (lower is better) Translates to: ERKTISRSFTFCKVEKAHHQQAV*CNCMVG Trigger: GCCTACCATGCAGTTGCACAATACTGCCTGTTGGTG...ATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR GCA 72 bp | TTTCACTTTATTACAGACATGAAGAGCCAGCAGTTTTaGTTATGGAGCTGGGGTGGAACCCATGCCCTCAGA | + |
Preference number: 3 (lower is better) Translates to: FHFITDMKSQQF*LWSWGGTHALR Trigger: TCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTCATGTCTGTAATAAAGTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR-3UTR CAA 90 bp | AACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATACACCAACAGGCAGTATaGTGCAACTGCATGGTAGGC | + |
Preference number: 3 (lower is better) Translates to: NGRPFPGPLHFAKWKKRIHQQAV*CNCMVG Trigger: GCCTACCATGCAGTTGCACAATACTGCCTGTTGGTG...TATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR GCA 72 bp | AAGGTAGGCTTCCCACAGGGAAGAGGCTTCTCAGAGTaGTCTTGGACACTTGAAGAATTATTAAATATCCCC | + |
Preference number: 3 (lower is better) Translates to: KVGFPQGRGFSE*SWTLEELLNIP Trigger: GGGGATATTTAATAATTCTTCAAGTGTCCAAGAGCACTCTGAGAAGCCTCTTCCCTGTGGGAAGCCTACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR GCA 72 bp | CTTGCTTGCCACAATATTTACACAGGCCATGACCCCTaGTTTGAGTTTTACAGTTATCTGAGTAGGTGGCTG | + |
Preference number: 3 (lower is better) Translates to: LACHNIYTGHDP*FEFYSYLSRWL Trigger: CAGCCACCTACTCAGATAACTGTAAAACTCAAAGCAGGGGTCATGGCCTGTGTAAATATTGTGGCAAGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR-3UTR CAA 90 bp | TTTATTACAGACATGAAGAGCCAGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCAGGTCCTTTACATTTaGCAAAGTGGAAAAAGCGCA | + |
Preference number: 3 (lower is better) Translates to: FITDMKSQQFCLWSWGGTQVLYI*QSGKSA Trigger: TGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTG...GGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTCATGTCTGTAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR TCA 72 bp | GCCGTGCATCCTGCCTTTAAAATGAGTGTTTTCACATaGATTAGGAAAGCTGGGAACGGAAGACCATTTCCA | + |
Preference number: 3 (lower is better) Translates to: AVHPAFKMSVFT*IRKAGNGRPFP Trigger: TGGAAATGGTCTTCCGTTCCCAGCTTTCCTAATTCATGTGAAAACACTCATTTTAAAGGCAGGATGCACGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR TCA 72 bp | ACAGGGAAGAGGCTTCTCAGAGTGCTCTTGGACACTTaGAGAATTATTAAATATCCCCACTGCTCCAGCATT | + |
Preference number: 3 (lower is better) Translates to: TGKRLLRVLLDT*RIIKYPHCSSI Trigger: AATGCTGGAGCAGTGGGGATATTTAATAATTCTTCAAGTGTCCAAGAGCACTCTGAGAAGCCTCTTCCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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3UTR-3UTR CAA 90 bp | AAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAAGCAATACTTTTGTTaGGGATATGGAGGGAGGAAG | + |
Preference number: 3 (lower is better) Translates to: KLGTEDHFQVLYILQSGKKQYFC*GYGGRK Trigger: CTTCCTCCCTCCATATCCCAAACAAAAGTATTGCTT...TTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR-3UTR CAA 90 bp | GGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATACAAAAGCAATACTTTTGTTaGGGATATGGAGGGAGGAAG | + |
Preference number: 3 (lower is better) Translates to: GRPFPGPLHFAKWKKRIQKQYFC*GYGGRK Trigger: CTTCCTCCCTCCATATCCCAAACAAAAGTATTGCTT...TTGTATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR-3UTR CAA 90 bp | AACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATAATCAAAGCAATACTTTaGTTTGGGATATGGAGGGAG | + |
Preference number: 3 (lower is better) Translates to: NGRPFPGPLHFAKWKKRIIKAIL*FGIWRE Trigger: CTCCCTCCATATCCCAAACAAAAGTATTGCTTTGAT...TATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR TCA 72 bp | TTGTTTGGGATATGGAGGGAGGAAGACAATGAACTGTaGTTGTTTAGGCCTATAGTGAGAACAGGCAATATT | + |
Preference number: 3 (lower is better) Translates to: LFGIWREEDNEL*LFRPIVRTGNI Trigger: AATATTGCCTGTTCTCACTATAGGCCTAAACAATCACAGTTCATTGTCTTCCTCCCTCCATATCCCAAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR TCA 72 bp | ACAGGCAATATTATTTACCAAACGAGTATTCAGAAGTaGCCAAAGAACAAGTTAGCTTCCATGAACAAACCA | + |
Preference number: 3 (lower is better) Translates to: TGNIIYQTSIQK*PKNKLASMNKP Trigger: TGGTTTGTTCATGGAAGCTAACTTGTTCTTTGGTCACTTCTGAATACTCGTTTGGTAAATAATATTGCCTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | GGTCACTGGTGCAGGCCACTAGTAGCGTTGCTCAGCACAGCAGGCCAGGCCTGGAGAAACAGGTGTGGCTaGGAGGGAGTGGCGGTAGCC | + |
Preference number: 4 (lower is better) Translates to: GHWCRPLVALLSTAGQAWRNRCG*EGVAVA Trigger: GGCTACCGCCACTCCCTCCCAGCCACACCTGTTTCT...CCAGGCCTGGCCTGCTGTGCTGAGCAACGCTACTAGTGGCCTGCACCAGTGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR GCA 90 bp | AGTATTGTGCAACTGCATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCTGCCTGGGGTCCTGCTaGACCATGGCCTCCAGCTGC | + |
Preference number: 4 (lower is better) Translates to: SIVQLHGRQVSGSEGSPACLGSC*TMASSC Trigger: GCAGCTGGAGGCCATGGTGCAGCAGGACCCCAGGCA...GGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCATGCAGTTGCACAATACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | CCCATGCCCTCAGATCGTGAGGCACAAATGATGCTCCGCTGCATCCCACAGCCGAGGACCTGCCTGGGCTaGAGGAGATGCCTCACTTGG | + |
Preference number: 4 (lower is better) Translates to: PMPSDREAQMMLRCIPQPRTCLG*RRCLTW Trigger: CCAAGTGAGGCATCTCCTTCAGCCCAGGCAGGTCCT...CGGCTGTGGGATGCAGCGGAGCATCATTTGTGCCTCACGATCTGAGGGCATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | GAACCCATGCCCTCAGATCGTGAGGCACAAATGATGCTCCGCTGCATCCCACAGTGCCTGGGGTCCTGCTaGACCATGGCCTCCAGCTGC | + |
Preference number: 4 (lower is better) Translates to: EPMPSDREAQMMLRCIPQCLGSC*TMASSC Trigger: GCAGCTGGAGGCCATGGTGCAGCAGGACCCCAGGCA...CTGTGGGATGCAGCGGAGCATCATTTGTGCCTCACGATCTGAGGGCATGGGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | ATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCAGCCGAAGGCATGCTCGCAAGGGCTCGTCTTTaGAGGAGGACTGATTGGAGG | + |
Preference number: 4 (lower is better) Translates to: MVGRSAGLRVAQPAEGMLARARL*RRTDWR Trigger: CCTCCAATCAGTCCTCCTCCAAAGACGAGCCCTTGC...GAGCATGCCTTCGGCTGGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR CAA 72 bp | AGTTATCTGAGTAGGTGGCTGGGCAGGTGTCCTAACTaGCTGCACACCTCTCTGGGCTGGGGCCCTGGCCTG | + |
Preference number: 4 (lower is better) Translates to: SYLSRWLGRCPN*LHTSLGWGPGL Trigger: CAGGCCAGGGCCCCAGCCCAGAGAGGTGTGCAGCAAGTTAGGACACCTGCCCAGCCACCTACTCAGATAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR TCA 90 bp | CTACCTGGGGGCCTTCTGGAAGGTAGGCTTCCCACAGGGAAGAGGCTTCTCAGAAGGACCTGCCTGGGCTaGAGGAGATGCCTCACTTGG | + |
Preference number: 4 (lower is better) Translates to: LPGGLLEGRLPTGKRLLRRTCLG*RRCLTW Trigger: CCAAGTGAGGCATCTCCTTCAGCCCAGGCAGGTCCT...TCTGAGAAGCCTCTTCCCTGTGGGAAGCCTACCTTCCAGAAGGCCCCCAGGTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | AGTATTGTGCAACTGCATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCGATCAGTGGCACCTCTaGGGGGCTCCCCAACATCCT | + |
Preference number: 4 (lower is better) Translates to: SIVQLHGRQVSGSEGSPADQWHL*GAPQHP Trigger: AGGATGTTGGGGAGCCCCCCAGAGGTGCCACTGATC...GGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCATGCAGTTGCACAATACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR CAA 72 bp | GCATTGAGTGGTCACTGGTGCAGGCCACTAGTAGCGTaGCTCAGCACAGCAGGCCAGGCCTGGTCAGGATGT | + |
Preference number: 4 (lower is better) Translates to: ALSGHWCRPLVA*LSTAGQAWSGC Trigger: ACATCCTGACCAGGCCTGGCCTGCTGTGCTGAGCAACGCTACTAGTGGCCTGCACCAGTGACCACTCAATGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR GCA 90 bp | GAAGAGCCAGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCGGACCATGGAGCCCCTaGGTCCTGGGTACACGTGTG | + |
Preference number: 4 (lower is better) Translates to: EEPAVLLMELGWNPCPQIGPWSP*VLGTRV Trigger: CACACGTGTACCCAGGACGCAGGGGCTCCATGGTCC...GATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | CCCCACTGCTCCAGCATTGAGTGGTCACTGGTGCAGGCCACTAGTAGCGTTGCTCGGAGGGGATGCATGTaGTTGCTGCAGACGGTCTTG | + |
Preference number: 4 (lower is better) Translates to: PHCSSIEWSLVQATSSVARRGCM*LLQTVL Trigger: CAAGACCGTCTGCAGCAAGCACATGCATCCCCTCCG...AGCAACGCTACTAGTGGCCTGCACCAGTGACCACTCAATGCTGGAGCAGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | ATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCAGCCGAAGGCATGCTCTGGAGGAGGACTGATTaGAGGACACTTCTGAGGTCT | + |
Preference number: 4 (lower is better) Translates to: MVGRSAGLRVAQPAEGMLWRRTD*RTLLRS Trigger: AGACCTCAGAAGTGTCCTCCAATCAGTCCTCCTCCA...GAGCATGCCTTCGGCTGGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | CCCATGCCCTCAGATCGTGAGGCACAAATGATGCTCCGCTGCATCCCACAGCCGGCAGACAGTTTGCCATaGAGTACAGCACACGGCCCA | + |
Preference number: 4 (lower is better) Translates to: PMPSDREAQMMLRCIPQPADSLP*STAHGP Trigger: TGGGCCGTGTGCTGTACTCCATGGCAAACTGTCTGC...CGGCTGTGGGATGCAGCGGAGCATCATTTGTGCCTCACGATCTGAGGGCATGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | AGTATTGTGCAACTGCATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCATTGGAGGACACTTCTaGGGTCTGCTCTTCTCGGGG | + |
Preference number: 4 (lower is better) Translates to: SIVQLHGRQVSGSEGSPAIGGHF*GLLFSG Trigger: CCCCGAGAAGAGCAGACCTCAGAAGTGTCCTCCAAT...GGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCATGCAGTTGCACAATACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | CCCCACTGCTCCAGCATTGAGTGGTCACTGGTGCAGGCCACTAGTAGCGTTGCTATTGGAGGACACTTCTaGGGTCTGCTCTTCTCGGGG | + |
Preference number: 4 (lower is better) Translates to: PHCSSIEWSLVQATSSVAIGGHF*GLLFSG Trigger: CCCCGAGAAGAGCAGACCTCAGAAGTGTCCTCCAAT...AGCAACGCTACTAGTGGCCTGCACCAGTGACCACTCAATGCTGGAGCAGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR TCA 90 bp | GAACCCATGCCCTCAGATCGTGAGGCACAAATGATGCTCCGCTGCATCCCACAGGCCGCAGGGAGTCCTTaGGCTTTCCCAGGTAAAGCA | + |
Preference number: 4 (lower is better) Translates to: EPMPSDREAQMMLRCIPQAAGSP*AFPGKA Trigger: TGCTTTACCTGGGAAAGCTCAAGGACTCCCTGCGGC...CTGTGGGATGCAGCGGAGCATCATTTGTGCCTCACGATCTGAGGGCATGGGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | AGTATTGTGCAACTGCATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCCTGACTGGGAAGCCATaGGTCATTCCTCCGGTCCAT | + |
Preference number: 4 (lower is better) Translates to: SIVQLHGRQVSGSEGSPALTGKP*VIPPVH Trigger: ATGGACCGGAGGAATGACGCATGGCTTCCCAGTCAG...GGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCATGCAGTTGCACAATACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | GAACCCATGCCCTCAGATCGTGAGGCACAAATGATGCTCCGCTGCATCCCACAGTCCACACAGGTCGACTaGTGCCCTCCAGTTCCTGCA | + |
Preference number: 4 (lower is better) Translates to: EPMPSDREAQMMLRCIPQSTQVD*CPPVPA Trigger: TGCAGGAACTGGAGGGCAGCAGTCGACCTGTGTGGA...CTGTGGGATGCAGCGGAGCATCATTTGTGCCTCACGATCTGAGGGCATGGGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | TCTTGCCTTCAGGCACAGGAGCGCATAGATGCTGTGCCAGCCCATGATGCTCCTATTGGAGGACACTTCTaGGGTCTGCTCTTCTCGGGG | + |
Preference number: 4 (lower is better) Translates to: SCLQAQERIDAVPAHDAPIGGHF*GLLFSG Trigger: CCCCGAGAAGAGCAGACCTCAGAAGTGTCCTCCAAT...AGGAGCATCATGGGCTGGCACAGCATCTATGCGCTCCTGTGCCTGAAGGCAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | GAAGAGCCAGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCGCCGCAGGGAGTCCTTaGGCTTTCCCAGGTAAAGCA | + |
Preference number: 4 (lower is better) Translates to: EEPAVLLMELGWNPCPQIAAGSP*AFPGKA Trigger: TGCTTTACCTGGGAAAGCTCAAGGACTCCCTGCGGC...GATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | GAACCCATGCCCTCAGATCGTGAGGCACAAATGATGCTCCGCTGCATCCCACAGACATGGTGGTCAGGTTaGAGAGCACGCTCTCGTGCA | + |
Preference number: 4 (lower is better) Translates to: EPMPSDREAQMMLRCIPQTWWSG*RARSRA Trigger: TGCACGAGAGCGTGCTCTTCAACCTGACCACCATGT...CTGTGGGATGCAGCGGAGCATCATTTGTGCCTCACGATCTGAGGGCATGGGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | AGTATTGTGCAACTGCATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCTCAGGCACTGTGTGTTaGAGCTGTCCCCTTCTTTGC | + |
Preference number: 4 (lower is better) Translates to: SIVQLHGRQVSGSEGSPASGTVC*SCPLLC Trigger: GCAAAGAAGGGGACAGCTTCAACACACAGTGCCTGA...GGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCATGCAGTTGCACAATACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | CACTGCTCCAGCATTGAGTGGTCACTGGTGCAGGCCACTAGTAGCGTTGCTCAGGCAAGGGCTCGTCTTTaGAGGAGGACTGATTGGAGG | + |
Preference number: 4 (lower is better) Translates to: HCSSIEWSLVQATSSVAQARARL*RRTDWR Trigger: CCTCCAATCAGTCCTCCTCCAAAGACGAGCCCTTGC...CTGAGCAACGCTACTAGTGGCCTGCACCAGTGACCACTCAATGCTGGAGCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | TGCAACTGCATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCAGCCGAATCCATCTCAGCATTCTaGAAAAGGCCCAACTTCACC | + |
Preference number: 4 (lower is better) Translates to: CNCMVGRSAGLRVAQPAESISAF*KRPNFT Trigger: GGTGAAGTTGGGCCTTTTCCAGAATGCTGAGATGGA...TTCGGCTGGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCATGCAGTTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | AGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCGTGAGGCATCCACTCAGCAGCTGTaGCTCCTGCTCCGGGTAGTA | + |
Preference number: 4 (lower is better) Translates to: SSFAYGAGVEPMPSDREASTQQL*LLLRVV Trigger: TACTACCCGGAGCAGGAGCCACAGCTGCTGAGTGGA...TGCCTCACGATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | ATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCAGCCGAAGGCATGCTCTTAACTGCATCTCCCTaGATGTTGTCAAACTTGAGG | + |
Preference number: 4 (lower is better) Translates to: MVGRSAGLRVAQPAEGMLLTASP*MLSNLR Trigger: CCTCAAGTTTGACAACATTCAGGGAGATGCAGTTAA...GAGCATGCCTTCGGCTGGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | TATCCCCACTGCTCCAGCATTGAGTGGTCACTGGTGCAGGCCACTAGTAGCGTTCTGACTGGGAAGCCATaGGTCATTCCTCCGGTCCAT | + |
Preference number: 4 (lower is better) Translates to: YPHCSSIEWSLVQATSSVLTGKP*VIPPVH Trigger: ATGGACCGGAGGAATGACGCATGGCTTCCCAGTCAG...AACGCTACTAGTGGCCTGCACCAGTGACCACTCAATGCTGGAGCAGTGGGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR GCA 90 bp | GTGACTTTGGCACCCTGCTTGACTCTGTATACAGCCCCTACCACTTGCTTGCCATCCACACAGGTCGACTaGTGCCCTCCAGTTCCTGCA | + |
Preference number: 4 (lower is better) Translates to: VTLAPCLTLYTAPTTCLPSTQVD*CPPVPA Trigger: TGCAGGAACTGGAGGGCAGCAGTCGACCTGTGTGGA...TGGCAAGCAAGTGGTAGGGGCTGTATACAGAGTCAAGCAGGGTGCCAAAGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | CCCATGCCCTCAGATCGTGAGGCACAAATGATGCTCCGCTGCATCCCACAGCCGTCAATGGTCTCTTCATaGTACAATGGCTGGCTCTCC | + |
Preference number: 4 (lower is better) Translates to: PMPSDREAQMMLRCIPQPSMVSS*YNGWLS Trigger: GGAGAGCCAGCCATTGTACCATGAAGAGACCATTGA...CGGCTGTGGGATGCAGCGGAGCATCATTTGTGCCTCACGATCTGAGGGCATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | CCCATGCCCTCAGATCGTGAGGCACAAATGATGCTCCGCTGCATCCCACAGCCGCAGCTTTTCTGGAACTaGGGAACCTGCATTGGGATT | + |
Preference number: 4 (lower is better) Translates to: PMPSDREAQMMLRCIPQPQLFWN*GTCIGI Trigger: AATCCCAATGCAGGTTCCCCAGTTCCAGAAAAGCTG...CGGCTGTGGGATGCAGCGGAGCATCATTTGTGCCTCACGATCTGAGGGCATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | TATCCCCACTGCTCCAGCATTGAGTGGTCACTGGTGCAGGCCACTAGTAGCGTTTCATGCTCAGGGCTGTaGCGAAGGGGTCATCACTTC | + |
Preference number: 4 (lower is better) Translates to: YPHCSSIEWSLVQATSSVSCSGL*RRGHHF Trigger: GAAGTGATGACCCCTTCGCCACAGCCCTGAGCATGA...AACGCTACTAGTGGCCTGCACCAGTGACCACTCAATGCTGGAGCAGTGGGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | GAAGAGCCAGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCGCAGACAGTTTGCCATaGAGTACAGCACACGGCCCA | + |
Preference number: 4 (lower is better) Translates to: EEPAVLLMELGWNPCPQIADSLP*STAHGP Trigger: TGGGCCGTGTGCTGTACTCCATGGCAAACTGTCTGC...GATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR CAA 72 bp | GCCATGCATATGGCTCACCTTCACCAACAGGCAGTATaGTGCAACTGCATGGTAGGCAGGTCAGCGGGTCTG | + |
Preference number: 4 (lower is better) Translates to: AMHMAHLHQQAV*CNCMVGRSAGL Trigger: CAGACCCGCTGACCTGCCTACCATGCAGTTGCACAATACTGCCTGTTGGTGAAGGTGAGCCATATGCATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | TCTTGCCTTCAGGCACAGGAGCGCATAGATGCTGTGCCAGCCCATGATGCTCCTGCTACTGAAACTGGGTaGTTTCACCATCTGGGACTC | + |
Preference number: 4 (lower is better) Translates to: SCLQAQERIDAVPAHDAPATETG*FHHLGL Trigger: GAGTCCCAGATGGTGAAATCACCCAGTTTCAGTAGC...AGGAGCATCATGGGCTGGCACAGCATCTATGCGCTCCTGTGCCTGAAGGCAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | CTACCTGGGGGCCTTCTGGAAGGTAGGCTTCCCACAGGGAAGAGGCTTCTCAGACACAGCCTGGATCTGTaGAAATGGCTTTGGAGATTC | + |
Preference number: 4 (lower is better) Translates to: LPGGLLEGRLPTGKRLLRHSLDL*KWLWRF Trigger: GAATCTCCAAAGCCATTTTCACAGATCCAGGCTGTG...TCTGAGAAGCCTCTTCCCTGTGGGAAGCCTACCTTCCAGAAGGCCCCCAGGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR TCA 90 bp | TGTACACTTCGGTGTTTCCACCCAGTTTGTGTGGCTCCAGATGTCCTCCTGTCTACTTCTCTGGTCGCCTaGCTGGGAAGCCATGCGTCA | + |
Preference number: 4 (lower is better) Translates to: CTLRCFHPVCVAPDVLLSTSLVA*LGSHAS Trigger: TGACGCATGGCTTCCCAGTCAGGCGACCAGAGAAGT...AGACAGGAGGACATCTGGAGCCACACAAACTGGGTGGAAACACCGAAGTGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR TCA 90 bp | AGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCGTGAGGCATCAGGCACTGTGTGTTaGAGCTGTCCCCTTCTTTGC | + |
Preference number: 4 (lower is better) Translates to: SSFAYGAGVEPMPSDREASGTVC*SCPLLC Trigger: GCAAAGAAGGGGACAGCTTCAACACACAGTGCCTGA...TGCCTCACGATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | ATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCAGCCGAAGGCATGCTCACACTTTCCATCATGTaGTCATTAAGCTTATCTCCG | + |
Preference number: 4 (lower is better) Translates to: MVGRSAGLRVAQPAEGMLTLSIM*SLSLSP Trigger: CGGAGATAAGCTTAATGAGCACATGATGGAAAGTGT...GAGCATGCCTTCGGCTGGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | GAAGAGCCAGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCGACCTGTCTCTTTGCTaGAGCCTTCTCACCCAGGAA | + |
Preference number: 4 (lower is better) Translates to: EEPAVLLMELGWNPCPQIDLSLC*SLLTQE Trigger: TTCCTGGGTGAGAAGGCTGCAGCAAAGAGACAGGTC...GATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | CAGCCCCTACCACTTGCTTGCCACAATATTTACACAGGCCATGACCCCTGCTTTACACAGGTCGACTGCTaGCCTCCAGTTCCTGCAGCT | + |
Preference number: 4 (lower is better) Translates to: QPLPLACHNIYTGHDPCFTQVDC*PPVPAA Trigger: AGCTGCAGGAACTGGAGGGCAGCAGTCGACCTGTGT...AAAGCAGGGGTCATGGCCTGTGTAAATATTGTGGCAAGCAAGTGGTAGGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR GCA 90 bp | CCCTGCTTGACTCTGTATACAGCCCCTACCACTTGCTTGCCACAATATTTACACGGACCATGGAGCCCCTaGGTCCTGGGTACACGTGTG | + |
Preference number: 4 (lower is better) Translates to: PCLTLYTAPTTCLPQYLHGPWSP*VLGTRV Trigger: CACACGTGTACCCAGGACGCAGGGGCTCCATGGTCC...GTGTAAATATTGTGGCAAGCAAGTGGTAGGGGCTGTATACAGAGTCAAGCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | AGGCCTGGTCAGGATGTACACTTCGGTGTTTCCACCCAGTTTGTGTGGCTCCAGGAGACCCTTCCGATGTaGGCTCGTTCTCTTCAGATG | + |
Preference number: 4 (lower is better) Translates to: RPGQDVHFGVSTQFVWLQETLPM*ARSLQM Trigger: CATCTGAAGAGAACGAGCCCACATCGGAAGGGTCTC...CTGGAGCCACACAAACTGGGTGGAAACACCGAAGTGTACATCCTGACCAGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | TTTGGCACCCTGCTTGACTCTGTATACAGCCCCTACCACTTGCTTGCCACAATAGCCCGACTTCCTCCGTaGCAGCATTCTCCAGTGCAG | + |
Preference number: 4 (lower is better) Translates to: FGTLLDSVYSPYHLLATIARLPP*QHSPVQ Trigger: CTGCACTGGAGAATGCTGCCACGGAGGAAGTCGGGC...TATTGTGGCAAGCAAGTGGTAGGGGCTGTATACAGAGTCAAGCAGGGTGCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | AGGCCTGGTCAGGATGTACACTTCGGTGTTTCCACCCAGTTTGTGTGGCTCCAGTGGAGTAAGATGGGCTaGTGGAATCCGGGGACTTCT | + |
Preference number: 4 (lower is better) Translates to: RPGQDVHFGVSTQFVWLQWSKMG*WNPGTS Trigger: AGAAGTCCCCGGATTCCACCAGCCCATCTTACTCCA...CTGGAGCCACACAAACTGGGTGGAAACACCGAAGTGTACATCCTGACCAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | AGTATTGTGCAACTGCATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCATCTATCCATCCTTGTaGAGTAAGATGGGCTGGTGG | + |
Preference number: 4 (lower is better) Translates to: SIVQLHGRQVSGSEGSPAIYPSL*SKMGWW Trigger: CCACCAGCCCATCTTACTCCACAAGGATGGATAGAT...GGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCATGCAGTTGCACAATACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | CCCATGCCCTCAGATCGTGAGGCACAAATGATGCTCCGCTGCATCCCACAGCCGCCAGCAAACACAGCCTaGATCTGTGAAAATGGCTTT | + |
Preference number: 4 (lower is better) Translates to: PMPSDREAQMMLRCIPQPPANTA*ICENGF Trigger: AAAGCCATTTTCACAGATCCAGGCTGTGTTTGCTGG...CGGCTGTGGGATGCAGCGGAGCATCATTTGTGCCTCACGATCTGAGGGCATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR CAA 72 bp | ACCGCCGTGATCAAGTTCAGTCATGGAGAGAGGTACTaGGAACTGAGTGGGCAGGCCGTGGGAAGAAACACT | + |
Preference number: 4 (lower is better) Translates to: TAVIKFSHGERY*ELSGQAVGRNT Trigger: AGTGTTTCTTCCCACGGCCTGCCCACTCAGTTCCAAGTACCTCTCTCCATGACTGAACTTGATCACGGCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR TCA 90 bp | GGAGAGAGGTACTTGGAACTGAGTGGGCAGGCCGTGGGAAGAAACACTGAAGGTTCTTTGGAGGAGGACTaGTTGGAGGACACTTCTGAG | + |
Preference number: 4 (lower is better) Translates to: GERYLELSGQAVGRNTEGSLEED*LEDTSE Trigger: CTCAGAAGTGTCCTCCAATCAGTCCTCCTCCAAAGA...ACCTTCAGTGTTTCTTCCCACGGCCTGCCCACTCAGTTCCAAGTACCTCTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR TCA 90 bp | CACTGCTCCAGCATTGAGTGGTCACTGGTGCAGGCCACTAGTAGCGTTGCTCAGTCTCACTGGTGCTACTaGAACTGGGTGATTTCACCA | + |
Preference number: 4 (lower is better) Translates to: HCSSIEWSLVQATSSVAQSHWCY*NWVISP Trigger: TGGTGAAATCACCCAGTTTCAGTAGCACCAGTGAGA...CTGAGCAACGCTACTAGTGGCCTGCACCAGTGACCACTCAATGCTGGAGCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR TCA 90 bp | TATCCCCACTGCTCCAGCATTGAGTGGTCACTGGTGCAGGCCACTAGTAGCGTTTACAGGGGCAGTGAGTaGAGACAGCTTTTCTGGAAC | + |
Preference number: 4 (lower is better) Translates to: YPHCSSIEWSLVQATSSVYRGSE*RQLFWN Trigger: GTTCCAGAAAAGCTGTCTTCACTCACTGCCCCTGTA...AACGCTACTAGTGGCCTGCACCAGTGACCACTCAATGCTGGAGCAGTGGGGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR TCA 90 bp | GAAGAGCCAGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCCTTTTGCATGCTCCTTaGGGACTCCAGCTCGTACAT | + |
Preference number: 4 (lower is better) Translates to: EEPAVLLMELGWNPCPQILLHAP*GLQLVH Trigger: ATGTACGAGCTGGAGTCCTCAAGGAGCATGCAAAAG...GATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | GAGAGGTACTTGGAACTGAGTGGGCAGGCCGTGGGAAGAAACACTGAAGGTGAAGACCTGTCTCTTTGCTaGAGCCTTCTCACCCAGGAA | + |
Preference number: 4 (lower is better) Translates to: ERYLELSGQAVGRNTEGEDLSLC*SLLTQE Trigger: TTCCTGGGTGAGAAGGCTGCAGCAAAGAGACAGGTC...TTCACCTTCAGTGTTTCTTCCCACGGCCTGCCCACTCAGTTCCAAGTACCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR GCA 90 bp | GAACCCATGCCCTCAGATCGTGAGGCACAAATGATGCTCCGCTGCATCCCACAGTCTGCTTCTTTTGCATaGTCCTTGAGGACTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: EPMPSDREAQMMLRCIPQSASFA*SLRTPA Trigger: AGCTGGAGTCCTCAAGGAGCATGCAAAAGAAGCAGA...CTGTGGGATGCAGCGGAGCATCATTTGTGCCTCACGATCTGAGGGCATGGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | TCTTGCCTTCAGGCACAGGAGCGCATAGATGCTGTGCCAGCCCATGATGCTCCTGCCTCAAGTAGGCTCTaGTTCTTTTGCATGCTCCTT | + |
Preference number: 4 (lower is better) Translates to: SCLQAQERIDAVPAHDAPASSRL*FFCMLL Trigger: AAGGAGCATGCAAAAGAAGCAGAGCCTACTTGAGGC...AGGAGCATCATGGGCTGGCACAGCATCTATGCGCTCCTGTGCCTGAAGGCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | GAAGAGCCAGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCAGGAGATGCCTCACTTaGGCTCTGCTCACCATCTTT | + |
Preference number: 4 (lower is better) Translates to: EEPAVLLMELGWNPCPQIRRCLT*ALLTIF Trigger: AAAGATGGTGAGCAGAGCCCAAGTGAGGCATCTCCT...GATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | GGAGAGAGGTACTTGGAACTGAGTGGGCAGGCCGTGGGAAGAAACACTGAAGGTAGGAGATGCCTCACTTaGGCTCTGCTCACCATCTTT | + |
Preference number: 4 (lower is better) Translates to: GERYLELSGQAVGRNTEGRRCLT*ALLTIF Trigger: AAAGATGGTGAGCAGAGCCCAAGTGAGGCATCTCCT...ACCTTCAGTGTTTCTTCCCACGGCCTGCCCACTCAGTTCCAAGTACCTCTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | TCTTTACCATGGCTACCTGGGGGCCTTCTGGAAGGTAGGCTTCCCACAGGGAAGTCAATGGTCTCTTCATaGTACAATGGCTGGCTCTCC | + |
Preference number: 4 (lower is better) Translates to: SLPWLPGGLLEGRLPTGKSMVSS*YNGWLS Trigger: GGAGAGCCAGCCATTGTACCATGAAGAGACCATTGA...CTTCCCTGTGGGAAGCCTACCTTCCAGAAGGCCCCCAGGTAGCCATGGTAAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | AGGCCTGGTCAGGATGTACACTTCGGTGTTTCCACCCAGTTTGTGTGGCTCCAGTGGAGGAGGACTGATTaGAGGACACTTCTGAGGTCT | + |
Preference number: 4 (lower is better) Translates to: RPGQDVHFGVSTQFVWLQWRRTD*RTLLRS Trigger: AGACCTCAGAAGTGTCCTCCAATCAGTCCTCCTCCA...CTGGAGCCACACAAACTGGGTGGAAACACCGAAGTGTACATCCTGACCAGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | ATGCCATGCATATGGCTCACCTTCACCAACAGGCAGTATTGTGCAACTGCATGGTCCACTCAGCAGCTGTaGCTCCTGCTCCGGGTAGTA | + |
Preference number: 4 (lower is better) Translates to: MPCIWLTFTNRQYCATAWSTQQL*LLLRVV Trigger: TACTACCCGGAGCAGGAGCCACAGCTGCTGAGTGGA...CCATGCAGTTGCACAATACTGCCTGTTGGTGAAGGTGAGCCATATGCATGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | TTTATTACAGACATGAAGAGCCAGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCGTGCAGGTAGTGCCTaGGGTCCTGCTGCACCATGG | + |
Preference number: 4 (lower is better) Translates to: FITDMKSQQFCLWSWGGTRAGSA*GPAAPW Trigger: CCATGGTGCAGCAGGACCCCAGGCACTACCTGCACG...GGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTCATGTCTGTAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR CAA 72 bp | GGCACCCTGCTTGACTCTGTATACAGCCCCTACCACTaGCTTGCCACAATATTTACACAGGCCATGACCCCT | + |
Preference number: 4 (lower is better) Translates to: GTLLDSVYSPYH*LATIFTQAMTP Trigger: AGGGGTCATGGCCTGTGTAAATATTGTGGCAAGCAAGTGGTAGGGGCTGTATACAGAGTCAAGCAGGGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR TCA 90 bp | CACACCCATCAAATGCTTTTACTGACCCATCTGCTCAAGTGTCTGCAGGTACAGACTTCTCTGGTCGCCTaGCTGGGAAGCCATGCGTCA | + |
Preference number: 4 (lower is better) Translates to: HTHQMLLLTHLLKCLQVQTSLVA*LGSHAS Trigger: TGACGCATGGCTTCCCAGTCAGGCGACCAGAGAAGT...CTGTACCTGCAGACACTTGAGCAGATGGGTCAGTAAAAGCATTTGATGGGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | CACACCCATCAAATGCTTTTACTGACCCATCTGCTCAAGTGTCTGCAGGTACAGACACAGGTCGACTGCTaGCCTCCAGTTCCTGCAGCT | + |
Preference number: 4 (lower is better) Translates to: HTHQMLLLTHLLKCLQVQTQVDC*PPVPAA Trigger: AGCTGCAGGAACTGGAGGGCAGCAGTCGACCTGTGT...CTGTACCTGCAGACACTTGAGCAGATGGGTCAGTAAAAGCATTTGATGGGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | CCCTGCTTGACTCTGTATACAGCCCCTACCACTTGCTTGCCACAATATTTACACAAGGAGTCTGTGGTGTaGCTGGTGGGCAGCCCATTC | + |
Preference number: 4 (lower is better) Translates to: PCLTLYTAPTTCLPQYLHKESVV*LVGSPF Trigger: GAATGGGCTGCCCACCAGCCACACCACAGACTCCTT...GTGTAAATATTGTGGCAAGCAAGTGGTAGGGGCTGTATACAGAGTCAAGCAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR TCA 90 bp | TCTTGCCTTCAGGCACAGGAGCGCATAGATGCTGTGCCAGCCCATGATGCTCCTAGTCCATCCAACTTCTaGGTTACTTTCTCAACGTCT | + |
Preference number: 4 (lower is better) Translates to: SCLQAQERIDAVPAHDAPSPSNF*VTFSTS Trigger: AGACGTTGAGAAAGTAACTCAGAAGTTGGATGGACT...AGGAGCATCATGGGCTGGCACAGCATCTATGCGCTCCTGTGCCTGAAGGCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | CACACCCATCAAATGCTTTTACTGACCCATCTGCTCAAGTGTCTGCAGGTACAGCTCTTCATGGTACAATaGCTGGCTCTCCTCCTCCCG | + |
Preference number: 4 (lower is better) Translates to: HTHQMLLLTHLLKCLQVQLFMVQ*LALLLP Trigger: CGGGAGGAGGAGAGCCAGCCATTGTACCATGAAGAG...CTGTACCTGCAGACACTTGAGCAGATGGGTCAGTAAAAGCATTTGATGGGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | ATGCCATGCATATGGCTCACCTTCACCAACAGGCAGTATTGTGCAACTGCATGGGAGACCCTTCCGATGTaGGCTCGTTCTCTTCAGATG | + |
Preference number: 4 (lower is better) Translates to: MPCIWLTFTNRQYCATAWETLPM*ARSLQM Trigger: CATCTGAAGAGAACGAGCCCACATCGGAAGGGTCTC...CCATGCAGTTGCACAATACTGCCTGTTGGTGAAGGTGAGCCATATGCATGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | TTCCCACAGGGAAGAGGCTTCTCAGAGTGCTCTTGGACACTTGAAGAATTATTAGATCAGTGGCACCTCTaGGGGGCTCCCCAACATCCT | + |
Preference number: 4 (lower is better) Translates to: FPQGRGFSECSWTLEELLDQWHL*GAPQHP Trigger: AGGATGTTGGGGAGCCCCCCAGAGGTGCCACTGATC...TAATAATTCTTCAAGTGTCCAAGAGCACTCTGAGAAGCCTCTTCCCTGTGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | GAGAGGTACTTGGAACTGAGTGGGCAGGCCGTGGGAAGAAACACTGAAGGTGAAATCTATCCATCCTTGTaGAGTAAGATGGGCTGGTGG | + |
Preference number: 4 (lower is better) Translates to: ERYLELSGQAVGRNTEGEIYPSL*SKMGWW Trigger: CCACCAGCCCATCTTACTCCACAAGGATGGATAGAT...TTCACCTTCAGTGTTTCTTCCCACGGCCTGCCCACTCAGTTCCAAGTACCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | GTGACTTTGGCACCCTGCTTGACTCTGTATACAGCCCCTACCACTTGCTTGCCATCCATCTCAGCATTCTaGAAAAGGCCCAACTTCACC | + |
Preference number: 4 (lower is better) Translates to: VTLAPCLTLYTAPTTCLPSISAF*KRPNFT Trigger: GGTGAAGTTGGGCCTTTTCCAGAATGCTGAGATGGA...TGGCAAGCAAGTGGTAGGGGCTGTATACAGAGTCAAGCAGGGTGCCAAAGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR TCA 90 bp | GGCACCCTGCTTGACTCTGTATACAGCCCCTACCACTTGCTTGCCACAATATTTGCTACTGAAACTGGGTaGTTTCACCATCTGGGACTC | + |
Preference number: 4 (lower is better) Translates to: GTLLDSVYSPYHLLATIFATETG*FHHLGL Trigger: GAGTCCCAGATGGTGAAATCACCCAGTTTCAGTAGC...AAATATTGTGGCAAGCAAGTGGTAGGGGCTGTATACAGAGTCAAGCAGGGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR TCA 90 bp | TATCCCCACTGCTCCAGCATTGAGTGGTCACTGGTGCAGGCCACTAGTAGCGTTTTAACTGCATCTCCCTaGATGTTGTCAAACTTGAGG | + |
Preference number: 4 (lower is better) Translates to: YPHCSSIEWSLVQATSSVLTASP*MLSNLR Trigger: CCTCAAGTTTGACAACATTCAGGGAGATGCAGTTAA...AACGCTACTAGTGGCCTGCACCAGTGACCACTCAATGCTGGAGCAGTGGGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR TCA 90 bp | GAAGAGCCAGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCAGTCCATCCAACTTCTaGGTTACTTTCTCAACGTCT | + |
Preference number: 4 (lower is better) Translates to: EEPAVLLMELGWNPCPQISPSNF*VTFSTS Trigger: AGACGTTGAGAAAGTAACTCAGAAGTTGGATGGACT...GATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | GGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCACATGGTGGTCAGGTTaGAGAGCACGCTCTCGTGCA | + |
Preference number: 4 (lower is better) Translates to: GNGRPFPGPLHFAKWKKRTWWSG*RARSRA Trigger: TGCACGAGAGCGTGCTCTTCAACCTGACCACCATGT...GCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | ATGCCATGCATATGGCTCACCTTCACCAACAGGCAGTATTGTGCAACTGCATGGCTTTTGCATGCTCCTTaGGGACTCCAGCTCGTACAT | + |
Preference number: 4 (lower is better) Translates to: MPCIWLTFTNRQYCATAWLLHAP*GLQLVH Trigger: ATGTACGAGCTGGAGTCCTCAAGGAGCATGCAAAAG...CCATGCAGTTGCACAATACTGCCTGTTGGTGAAGGTGAGCCATATGCATGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | CCCTGCTTGACTCTGTATACAGCCCCTACCACTTGCTTGCCACAATATTTACACCTCACAAACCAGAGCTaGAAGGAGTCTGTGGTGTGG | + |
Preference number: 4 (lower is better) Translates to: PCLTLYTAPTTCLPQYLHLTNQS*KESVVW Trigger: CCACACCACAGACTCCTTGCAGCTCTGGTTTGTGAG...GTGTAAATATTGTGGCAAGCAAGTGGTAGGGGCTGTATACAGAGTCAAGCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR GCA 90 bp | AGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCGTGAGGCAATTGTTGTTGGCCACTaGATTTGTTGGGTCCATTCT | + |
Preference number: 4 (lower is better) Translates to: SSFAYGAGVEPMPSDREAIVVGH*ICWVHS Trigger: AGAATGGACCCAACAAATGCAGTGGCCAACAACAAT...TGCCTCACGATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | ACCCTGCTTGACTCTGTATACAGCCCCTACCACTTGCTTGCCACAATATTTACACTCTTCATGGTACAATaGCTGGCTCTCCTCCTCCCG | + |
Preference number: 4 (lower is better) Translates to: TLLDSVYSPYHLLATIFTLFMVQ*LALLLP Trigger: CGGGAGGAGGAGAGCCAGCCATTGTACCATGAAGAG...TGTAAATATTGTGGCAAGCAAGTGGTAGGGGCTGTATACAGAGTCAAGCAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | GAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATGATCAGTGGCACCTCTaGGGGGCTCCCCAACATCCT | + |
Preference number: 4 (lower is better) Translates to: ERKTISRSFTFCKVEKAHDQWHL*GAPQHP Trigger: AGGATGTTGGGGAGCCCCCCAGAGGTGCCACTGATC...ATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | GCCTATAGTGAGAACAGGCAATATTATTTACCAAACGAGTATTCAGAAGTGACCGGACCATGGAGCCCCTaGGTCCTGGGTACACGTGTG | + |
Preference number: 4 (lower is better) Translates to: AYSENRQYYLPNEYSEVTGPWSP*VLGTRV Trigger: CACACGTGTACCCAGGACGCAGGGGCTCCATGGTCC...GGTCACTTCTGAATACTCGTTTGGTAAATAATATTGCCTGTTCTCACTATAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | GGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCCAGGAGCAGACAGTTTaGCATGGAGTACAGCACACG | + |
Preference number: 4 (lower is better) Translates to: GNGRPFPGPLHFAKWKKRQEQTV*HGVQHT Trigger: CGTGTGCTGTACTCCATGGCAAACTGTCTGCTCCTG...GCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | AACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATAGCCCGACTTCCTCCGTaGCAGCATTCTCCAGTGCAG | + |
Preference number: 4 (lower is better) Translates to: NGRPFPGPLHFAKWKKRIARLPP*QHSPVQ Trigger: CTGCACTGGAGAATGCTGCCACGGAGGAAGTCGGGC...TATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | GGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCTGGAGTAAGATGGGCTaGTGGAATCCGGGGACTTCT | + |
Preference number: 4 (lower is better) Translates to: GNGRPFPGPLHFAKWKKRWSKMG*WNPGTS Trigger: AGAAGTCCCCGGATTCCACCAGCCCATCTTACTCCA...GCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | CAGCCCCTACCACTTGCTTGCCACAATATTTACACAGGCCATGACCCCTGCTTTCCAGCAAACACAGCCTaGATCTGTGAAAATGGCTTT | + |
Preference number: 4 (lower is better) Translates to: QPLPLACHNIYTGHDPCFPANTA*ICENGF Trigger: AAAGCCATTTTCACAGATCCAGGCTGTGTTTGCTGG...AAAGCAGGGGTCATGGCCTGTGTAAATATTGTGGCAAGCAAGTGGTAGGGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | AAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAAGGAGTCTGTGGTGTaGCTGGTGGGCAGCCCATTC | + |
Preference number: 4 (lower is better) Translates to: KLGTEDHFQVLYILQSGKKESVV*LVGSPF Trigger: GAATGGGCTGCCCACCAGCCACACCACAGACTCCTT...TTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | CACACCCATCAAATGCTTTTACTGACCCATCTGCTCAAGTGTCTGCAGGTACAGAGCCTTGCTCCAAGTTaGCCAAGATCTTGCTGCAGA | + |
Preference number: 4 (lower is better) Translates to: HTHQMLLLTHLLKCLQVQSLAPS*PRSCCR Trigger: TCTGCAGCAAGATCTTGGCCAACTTGGAGCAAGGCT...CTGTACCTGCAGACACTTGAGCAGATGGGTCAGTAAAAGCATTTGATGGGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | GAGCTGAATAATCAAAGCAATACTTTTGTTTGGGATATGGAGGGAGGAAGACAACGTGCAGGTAGTGCCTaGGGTCCTGCTGCACCATGG | + |
Preference number: 4 (lower is better) Translates to: ELNNQSNTFVWDMEGGRQRAGSA*GPAAPW Trigger: CCATGGTGCAGCAGGACCCCAGGCACTACCTGCACG...TTGTCTTCCTCCCTCCATATCCCAAACAAAAGTATTGCTTTGATTATTCAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | GAGCTGAATAATCAAAGCAATACTTTTGTTTGGGATATGGAGGGAGGAAGACAAAGGACCTGCCTGGGCTaGAGGAGATGCCTCACTTGG | + |
Preference number: 4 (lower is better) Translates to: ELNNQSNTFVWDMEGGRQRTCLG*RRCLTW Trigger: CCAAGTGAGGCATCTCCTTCAGCCCAGGCAGGTCCT...TTGTCTTCCTCCCTCCATATCCCAAACAAAAGTATTGCTTTGATTATTCAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | CACACCCATCAAATGCTTTTACTGACCCATCTGCTCAAGTGTCTGCAGGTACAGTCTCACTGGTGCTACTaGAACTGGGTGATTTCACCA | + |
Preference number: 4 (lower is better) Translates to: HTHQMLLLTHLLKCLQVQSHWCY*NWVISP Trigger: TGGTGAAATCACCCAGTTTCAGTAGCACCAGTGAGA...CTGTACCTGCAGACACTTGAGCAGATGGGTCAGTAAAAGCATTTGATGGGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | GGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATACAAACTTCTCTGGTCGCCTaGCTGGGAAGCCATGCGTCA | + |
Preference number: 4 (lower is better) Translates to: GRPFPGPLHFAKWKKRIQTSLVA*LGSHAS Trigger: TGACGCATGGCTTCCCAGTCAGGCGACCAGAGAAGT...TTGTATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
||
CDS-3UTR TCA 90 bp | GGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATACAACGAGACCTCCACAGCTaGACAGAGGCTTGCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: GRPFPGPLHFAKWKKRIQRDLHS*TEACLL Trigger: AAGCAGGCAAGCCTCTGTTCAGCTGTGGAGGTCTCG...TTGTATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
||
CDS-3UTR TCA 90 bp | AACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATACGAGACCTCCACAGCTaGACAGAGGCTTGCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: NGRPFPGPLHFAKWKKRIRDLHS*TEACLL Trigger: AAGCAGGCAAGCCTCTGTTCAGCTGTGGAGGTCTCG...TATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
||
CDS-3UTR GCA 90 bp | GAATTAGGAAAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAACTGACTGGGAAGCCATaGGTCATTCCTCCGGTCCAT | + |
Preference number: 4 (lower is better) Translates to: ELGKLGTEDHFQVLYILQLTGKP*VIPPVH Trigger: ATGGACCGGAGGAATGACGCATGGCTTCCCAGTCAG...TTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTTTCCTAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | GAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATACAAGTCCACACAGGTCGACTaGTGCCCTCCAGTTCCTGCA | + |
Preference number: 4 (lower is better) Translates to: EDHFQVLYILQSGKSAYKSTQVD*CPPVPA Trigger: TGCAGGAACTGGAGGGCAGCAGTCGACCTGTGTGGA...CTTGTATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | AAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAATCATGGTACAATGGCTaGCTCTCCTCCTCCCGAGAC | + |
Preference number: 4 (lower is better) Translates to: KLGTEDHFQVLYILQSGKSWYNG*LSSSRD Trigger: GTCTCGGGAGGAGGAGAGCCAGCCATTGTACCATGA...TTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | AAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAACTCTTCATGGTACAATaGCTGGCTCTCCTCCTCCCG | + |
Preference number: 4 (lower is better) Translates to: KLGTEDHFQVLYILQSGKLFMVQ*LALLLP Trigger: CGGGAGGAGGAGAGCCAGCCATTGTACCATGAAGAG...TTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | GAGCTGAATAATCAAAGCAATACTTTTGTTTGGGATATGGAGGGAGGAAGACAAGCCCGACTTCCTCCGTaGCAGCATTCTCCAGTGCAG | + |
Preference number: 4 (lower is better) Translates to: ELNNQSNTFVWDMEGGRQARLPP*QHSPVQ Trigger: CTGCACTGGAGAATGCTGCCACGGAGGAAGTCGGGC...TTGTCTTCCTCCCTCCATATCCCAAACAAAAGTATTGCTTTGATTATTCAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | TTTATTACAGACATGAAGAGCCAGCAGTTTTGCTTATGGAGCTGGGGTGGAACCTGGAGGAGGACTGATTaGAGGACACTTCTGAGGTCT | + |
Preference number: 4 (lower is better) Translates to: FITDMKSQQFCLWSWGGTWRRTD*RTLLRS Trigger: AGACCTCAGAAGTGTCCTCCAATCAGTCCTCCTCCA...GGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTCATGTCTGTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | GCCTATAGTGAGAACAGGCAATATTATTTACCAAACGAGTATTCAGAAGTGACCAGAAACAGGTGTGGCTaGGAGGGAGTGGCGGTAGCC | + |
Preference number: 4 (lower is better) Translates to: AYSENRQYYLPNEYSEVTRNRCG*EGVAVA Trigger: GGCTACCGCCACTCCCTCCCAGCCACACCTGTTTCT...GGTCACTTCTGAATACTCGTTTGGTAAATAATATTGCCTGTTCTCACTATAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | CCCTGCTTGACTCTGTATACAGCCCCTACCACTTGCTTGCCACAATATTTACACCAGCTTTTCTGGAACTaGGGAACCTGCATTGGGATT | + |
Preference number: 4 (lower is better) Translates to: PCLTLYTAPTTCLPQYLHQLFWN*GTCIGI Trigger: AATCCCAATGCAGGTTCCCCAGTTCCAGAAAAGCTG...GTGTAAATATTGTGGCAAGCAAGTGGTAGGGGCTGTATACAGAGTCAAGCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | GAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATTCATGCTCAGGGCTGTaGCGAAGGGGTCATCACTTC | + |
Preference number: 4 (lower is better) Translates to: ERKTISRSFTFCKVEKAHSCSGL*RRGHHF Trigger: GAAGTGATGACCCCTTCGCCACAGCCCTGAGCATGA...ATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | CCCTGCTTGACTCTGTATACAGCCCCTACCACTTGCTTGCCACAATATTTACACACTGCTCCACTGAGCTaGCATTTAAGACCTGTCTCT | + |
Preference number: 4 (lower is better) Translates to: PCLTLYTAPTTCLPQYLHTAPLS*HLRPVS Trigger: AGAGACAGGTCTTAAATGCCAGCTCAGTGGAGCAGT...GTGTAAATATTGTGGCAAGCAAGTGGTAGGGGCTGTATACAGAGTCAAGCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | GGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATACAAAAGGAGTCTGTGGTGTaGCTGGTGGGCAGCCCATTC | + |
Preference number: 4 (lower is better) Translates to: GRPFPGPLHFAKWKKRIQKESVV*LVGSPF Trigger: GAATGGGCTGCCCACCAGCCACACCACAGACTCCTT...TTGTATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | TTTATTACAGACATGAAGAGCCAGCAGTTTTGCTTATGGAGCTGGGGTGGAACCTCTCACTGGTGCTACTaGAACTGGGTGATTTCACCA | + |
Preference number: 4 (lower is better) Translates to: FITDMKSQQFCLWSWGGTSHWCY*NWVISP Trigger: TGGTGAAATCACCCAGTTTCAGTAGCACCAGTGAGA...GGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTCATGTCTGTAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | TTTATTACAGACATGAAGAGCCAGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCACAGCCTGGATCTGTaGAAATGGCTTTGGAGATTC | + |
Preference number: 4 (lower is better) Translates to: FITDMKSQQFCLWSWGGTHSLDL*KWLWRF Trigger: GAATCTCCAAAGCCATTTTCACAGATCCAGGCTGTG...GGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTCATGTCTGTAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | ATGCCATGCATATGGCTCACCTTCACCAACAGGCAGTATTGTGCAACTGCATGGTCTGTGAAGAACTTGTaGGCTTCTGCGAAGTTATTC | + |
Preference number: 4 (lower is better) Translates to: MPCIWLTFTNRQYCATAWSVKNL*ASAKLF Trigger: GAATAACTTCGCAGAAGCTCACAAGTTCTTCACAGA...CCATGCAGTTGCACAATACTGCCTGTTGGTGAAGGTGAGCCATATGCATGGCAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | GAATTAGGAAAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAACTCACAAACCAGAGCTaGAAGGAGTCTGTGGTGTGG | + |
Preference number: 4 (lower is better) Translates to: ELGKLGTEDHFQVLYILQLTNQS*KESVVW Trigger: CCACACCACAGACTCCTTGCAGCTCTGGTTTGTGAG...TTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTTTCCTAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | CACACCCATCAAATGCTTTTACTGACCCATCTGCTCAAGTGTCTGCAGGTACAGATACTGCTGCAGTTCTaGATGCAGAATACGCATCGA | + |
Preference number: 4 (lower is better) Translates to: HTHQMLLLTHLLKCLQVQILLQF*MQNTHR Trigger: TCGATGCGTATTCTGCATGCAGAACTGCAGCAGTAT...CTGTACCTGCAGACACTTGAGCAGATGGGTCAGTAAAAGCATTTGATGGGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | AAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAGAGACCCTTCCGATGTaGGCTCGTTCTCTTCAGATG | + |
Preference number: 4 (lower is better) Translates to: KLGTEDHFQVLYILQSGKETLPM*ARSLQM Trigger: CATCTGAAGAGAACGAGCCCACATCGGAAGGGTCTC...TTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | TTTACATTTTGCAAAGTGGAAAAAGCGCATACAAGCGTTAAGCAATTCTCTTGCAGAAACAGGTGTGGCTaGGAGGGAGTGGCGGTAGCC | + |
Preference number: 4 (lower is better) Translates to: FTFCKVEKAHTSVKQFSCRNRCG*EGVAVA Trigger: GGCTACCGCCACTCCCTCCCAGCCACACCTGTTTCT...GCAAGAGAATTGCTTAACGCTTGTATGCGCTTTTTCCACTTTGCAAAATGTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | GAATTAGGAAAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAATGGAGTAAGATGGGCTaGTGGAATCCGGGGACTTCT | + |
Preference number: 4 (lower is better) Translates to: ELGKLGTEDHFQVLYILQWSKMG*WNPGTS Trigger: AGAAGTCCCCGGATTCCACCAGCCCATCTTACTCCA...TTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTTTCCTAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | GAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATACAAGTCATGCTCAGGGCTGTaGCGAAGGGGTCATCACTTC | + |
Preference number: 4 (lower is better) Translates to: EDHFQVLYILQSGKSAYKSCSGL*RRGHHF Trigger: GAAGTGATGACCCCTTCGCCACAGCCCTGAGCATGA...CTTGTATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | GGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCACTGCTCCACTGAGCTaGCATTTAAGACCTGTCTCT | + |
Preference number: 4 (lower is better) Translates to: GNGRPFPGPLHFAKWKKRTAPLS*HLRPVS Trigger: AGAGACAGGTCTTAAATGCCAGCTCAGTGGAGCAGT...GCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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3UTR CAA 72 bp | TTTTCACTTTATTACAGACATGAAGAGCCAGCAGTTTaGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAG | + |
Preference number: 4 (lower is better) Translates to: FSLYYRHEEPAV*LMELGWNPCPQ Trigger: CTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTCATGTCTGTAATAAAGTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | AAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAATCTTTGGAGGAGGACTaGTTGGAGGACACTTCTGAG | + |
Preference number: 4 (lower is better) Translates to: KLGTEDHFQVLYILQSGKSLEED*LEDTSE Trigger: CTCAGAAGTGTCCTCCAATCAGTCCTCCTCCAAAGA...TTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | GAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATACAAGGACCTGTCTCTTTGCTaGAGCCTTCTCACCCAGGAA | + |
Preference number: 4 (lower is better) Translates to: EDHFQVLYILQSGKSAYKDLSLC*SLLTQE Trigger: TTCCTGGGTGAGAAGGCTGCAGCAAAGAGACAGGTC...CTTGTATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | TTTACATTTTGCAAAGTGGAAAAAGCGCATACAAGCGTTAAGCAATTCTCTTGCACACAGGTCGACTGCTaGCCTCCAGTTCCTGCAGCT | + |
Preference number: 4 (lower is better) Translates to: FTFCKVEKAHTSVKQFSCTQVDC*PPVPAA Trigger: AGCTGCAGGAACTGGAGGGCAGCAGTCGACCTGTGT...GCAAGAGAATTGCTTAACGCTTGTATGCGCTTTTTCCACTTTGCAAAATGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | GCCTATAGTGAGAACAGGCAATATTATTTACCAAACGAGTATTCAGAAGTGACCTCATGGTACAATGGCTaGCTCTCCTCCTCCCGAGAC | + |
Preference number: 4 (lower is better) Translates to: AYSENRQYYLPNEYSEVTSWYNG*LSSSRD Trigger: GTCTCGGGAGGAGGAGAGCCAGCCATTGTACCATGA...GGTCACTTCTGAATACTCGTTTGGTAAATAATATTGCCTGTTCTCACTATAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | CACACCCATCAAATGCTTTTACTGACCCATCTGCTCAAGTGTCTGCAGGTACAGCTCCACCAAGATCAATaGTCTCTTCATGGTACAATG | + |
Preference number: 4 (lower is better) Translates to: HTHQMLLLTHLLKCLQVQLHQDQ*SLHGTM Trigger: CATTGTACCATGAAGAGACCATTGATCTTGGTGGAG...CTGTACCTGCAGACACTTGAGCAGATGGGTCAGTAAAAGCATTTGATGGGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | GCCTATAGTGAGAACAGGCAATATTATTTACCAAACGAGTATTCAGAAGTGACCGCAAGGGCTCGTCTTTaGAGGAGGACTGATTGGAGG | + |
Preference number: 4 (lower is better) Translates to: AYSENRQYYLPNEYSEVTARARL*RRTDWR Trigger: CCTCCAATCAGTCCTCCTCCAAAGACGAGCCCTTGC...GGTCACTTCTGAATACTCGTTTGGTAAATAATATTGCCTGTTCTCACTATAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | GAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATAGCCTTGCTCCAAGTTaGCCAAGATCTTGCTGCAGA | + |
Preference number: 4 (lower is better) Translates to: ERKTISRSFTFCKVEKAHSLAPS*PRSCCR Trigger: TCTGCAGCAAGATCTTGGCCAACTTGGAGCAAGGCT...ATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | GAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATACAAGATCAGGTGTCATGTCTaGGATGTCTCTGGGAGTGTC | + |
Preference number: 4 (lower is better) Translates to: EDHFQVLYILQSGKSAYKIRCHV*DVSGSV Trigger: GACACTCCCAGAGACATCTCAGACATGACACCTGAT...CTTGTATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | AACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATATACAGGGGCAGTGAGTaGAGACAGCTTTTCTGGAAC | + |
Preference number: 4 (lower is better) Translates to: NGRPFPGPLHFAKWKKRIYRGSE*RQLFWN Trigger: GTTCCAGAAAAGCTGTCTTCACTCACTGCCCCTGTA...TATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | AAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAACACAGCCTGGATCTGTaGAAATGGCTTTGGAGATTC | + |
Preference number: 4 (lower is better) Translates to: KLGTEDHFQVLYILQSGKHSLDL*KWLWRF Trigger: GAATCTCCAAAGCCATTTTCACAGATCCAGGCTGTG...TTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | TTTATTACAGACATGAAGAGCCAGCAGTTTTGCTTATGGAGCTGGGGTGGAACCTCTGTGAAGAACTTGTaGGCTTCTGCGAAGTTATTC | + |
Preference number: 4 (lower is better) Translates to: FITDMKSQQFCLWSWGGTSVKNL*ASAKLF Trigger: GAATAACTTCGCAGAAGCTCACAAGTTCTTCACAGA...GGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTCATGTCTGTAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | CACACCCATCAAATGCTTTTACTGACCCATCTGCTCAAGTGTCTGCAGGTACAGACACTTTCCATCATGTaGTCATTAAGCTTATCTCCG | + |
Preference number: 4 (lower is better) Translates to: HTHQMLLLTHLLKCLQVQTLSIM*SLSLSP Trigger: CGGAGATAAGCTTAATGAGCACATGATGGAAAGTGT...CTGTACCTGCAGACACTTGAGCAGATGGGTCAGTAAAAGCATTTGATGGGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | GAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATACAAGCCACTTCTTTGTCTGTaGTACTGGGCAGTCGGTGAT | + |
Preference number: 4 (lower is better) Translates to: EDHFQVLYILQSGKSAYKPLLCL*YWAVGD Trigger: ATCACCGACTGCCCAGTAGCACAGACAAAGAAGTGG...CTTGTATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | GGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATACAACCACTTCTTTGTCTGTaGTACTGGGCAGTCGGTGAT | + |
Preference number: 4 (lower is better) Translates to: GRPFPGPLHFAKWKKRIQPLLCL*YWAVGD Trigger: ATCACCGACTGCCCAGTAGCACAGACAAAGAAGTGG...TTGTATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | TTCCCACAGGGAAGAGGCTTCTCAGAGTGCTCTTGGACACTTGAAGAATTATTAATACTGCTGCAGTTCTaGATGCAGAATACGCATCGA | + |
Preference number: 4 (lower is better) Translates to: FPQGRGFSECSWTLEELLILLQF*MQNTHR Trigger: TCGATGCGTATTCTGCATGCAGAACTGCAGCAGTAT...TAATAATTCTTCAAGTGTCCAAGAGCACTCTGAGAAGCCTCTTCCCTGTGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR GCA 90 bp | GAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATTCTTCAGCTAAGCCTTaGTCCAAGTTGGCCAAGATC | + |
Preference number: 4 (lower is better) Translates to: ERKTISRSFTFCKVEKAHSSAKP*SKLAKI Trigger: GATCTTGGCCAACTTGGAGCAAGGCTTAGCTGAAGA...ATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | GAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATACAAGAGGAGATGCCTCACTTaGGCTCTGCTCACCATCTTT | + |
Preference number: 4 (lower is better) Translates to: EDHFQVLYILQSGKSAYKRRCLT*ALLTIF Trigger: AAAGATGGTGAGCAGAGCCCAAGTGAGGCATCTCCT...CTTGTATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | AAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAATCAATGGTCTCTTCATaGTACAATGGCTGGCTCTCC | + |
Preference number: 4 (lower is better) Translates to: KLGTEDHFQVLYILQSGKSMVSS*YNGWLS Trigger: GGAGAGCCAGCCATTGTACCATGAAGAGACCATTGA...TTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | ACCCTGCTTGACTCTGTATACAGCCCCTACCACTTGCTTGCCACAATATTTACACTCCACCAAGATCAATaGTCTCTTCATGGTACAATG | + |
Preference number: 4 (lower is better) Translates to: TLLDSVYSPYHLLATIFTLHQDQ*SLHGTM Trigger: CATTGTACCATGAAGAGACCATTGATCTTGGTGGAG...TGTAAATATTGTGGCAAGCAAGTGGTAGGGGCTGTATACAGAGTCAAGCAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CCA 90 bp | GAATTAGGAAAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAACTGCTCCACTGAGCTaGCATTTAAGACCTGTCTCT | + |
Preference number: 4 (lower is better) Translates to: ELGKLGTEDHFQVLYILQTAPLS*HLRPVS Trigger: AGAGACAGGTCTTAAATGCCAGCTCAGTGGAGCAGT...TTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTTTCCTAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | GCCTATAGTGAGAACAGGCAATATTATTTACCAAACGAGTATTCAGAAGTGACCATCAGGTGTCATGTCTaGGATGTCTCTGGGAGTGTC | + |
Preference number: 4 (lower is better) Translates to: AYSENRQYYLPNEYSEVTIRCHV*DVSGSV Trigger: GACACTCCCAGAGACATCTCAGACATGACACCTGAT...GGTCACTTCTGAATACTCGTTTGGTAAATAATATTGCCTGTTCTCACTATAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | GAATTAGGAAAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAATACTGCTGCAGTTCTaGATGCAGAATACGCATCGA | + |
Preference number: 4 (lower is better) Translates to: ELGKLGTEDHFQVLYILQILLQF*MQNTHR Trigger: TCGATGCGTATTCTGCATGCAGAACTGCAGCAGTAT...TTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTTTCCTAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | TTTACATTTTGCAAAGTGGAAAAAGCGCATACAAGCGTTAAGCAATTCTCTTGCCAGGAGCAGACAGTTTaGCATGGAGTACAGCACACG | + |
Preference number: 4 (lower is better) Translates to: FTFCKVEKAHTSVKQFSCQEQTV*HGVQHT Trigger: CGTGTGCTGTACTCCATGGCAAACTGTCTGCTCCTG...GCAAGAGAATTGCTTAACGCTTGTATGCGCTTTTTCCACTTTGCAAAATGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | AACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATAGCCTCAAGTAGGCTCTaGTTCTTTTGCATGCTCCTT | + |
Preference number: 4 (lower is better) Translates to: NGRPFPGPLHFAKWKKRIASSRL*FFCMLL Trigger: AAGGAGCATGCAAAAGAAGCAGAGCCTACTTGAGGC...TATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | AACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATACAGCTTTTCTGGAACTaGGGAACCTGCATTGGGATT | + |
Preference number: 4 (lower is better) Translates to: NGRPFPGPLHFAKWKKRIQLFWN*GTCIGI Trigger: AATCCCAATGCAGGTTCCCCAGTTCCAGAAAAGCTG...TATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | GGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATACAAATCTATCCATCCTTGTaGAGTAAGATGGGCTGGTGG | + |
Preference number: 4 (lower is better) Translates to: GRPFPGPLHFAKWKKRIQIYPSL*SKMGWW Trigger: CCACCAGCCCATCTTACTCCACAAGGATGGATAGAT...TTGTATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | TTTACATTTTGCAAAGTGGAAAAAGCGCATACAAGCGTTAAGCAATTCTCTTGCTCTTTGGAGGAGGACTaGTTGGAGGACACTTCTGAG | + |
Preference number: 4 (lower is better) Translates to: FTFCKVEKAHTSVKQFSCSLEED*LEDTSE Trigger: CTCAGAAGTGTCCTCCAATCAGTCCTCCTCCAAAGA...GCAAGAGAATTGCTTAACGCTTGTATGCGCTTTTTCCACTTTGCAAAATGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | TTTACATTTTGCAAAGTGGAAAAAGCGCATACAAGCGTTAAGCAATTCTCTTGCGCTACTGAAACTGGGTaGTTTCACCATCTGGGACTC | + |
Preference number: 4 (lower is better) Translates to: FTFCKVEKAHTSVKQFSCATETG*FHHLGL Trigger: GAGTCCCAGATGGTGAAATCACCCAGTTTCAGTAGC...GCAAGAGAATTGCTTAACGCTTGTATGCGCTTTTTCCACTTTGCAAAATGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | TTCCCACAGGGAAGAGGCTTCTCAGAGTGCTCTTGGACACTTGAAGAATTATTAACACTTTCCATCATGTaGTCATTAAGCTTATCTCCG | + |
Preference number: 4 (lower is better) Translates to: FPQGRGFSECSWTLEELLTLSIM*SLSLSP Trigger: CGGAGATAAGCTTAATGAGCACATGATGGAAAGTGT...TAATAATTCTTCAAGTGTCCAAGAGCACTCTGAGAAGCCTCTTCCCTGTGGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR GCA 90 bp | GCCTATAGTGAGAACAGGCAATATTATTTACCAAACGAGTATTCAGAAGTGACCTCTTCAGCTAAGCCTTaGTCCAAGTTGGCCAAGATC | + |
Preference number: 4 (lower is better) Translates to: AYSENRQYYLPNEYSEVTSSAKP*SKLAKI Trigger: GATCTTGGCCAACTTGGAGCAAGGCTTAGCTGAAGA...GGTCACTTCTGAATACTCGTTTGGTAAATAATATTGCCTGTTCTCACTATAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | GAATTAGGAAAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAATTGTTGTTGGCCACTaGATTTGTTGGGTCCATTCT | + |
Preference number: 4 (lower is better) Translates to: ELGKLGTEDHFQVLYILQIVVGH*ICWVHS Trigger: AGAATGGACCCAACAAATGCAGTGGCCAACAACAAT...TTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTTTCCTAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR GCA 90 bp | GCCTATAGTGAGAACAGGCAATATTATTTACCAAACGAGTATTCAGAAGTGACCTCTGCTTCTTTTGCATaGTCCTTGAGGACTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: AYSENRQYYLPNEYSEVTSASFA*SLRTPA Trigger: AGCTGGAGTCCTCAAGGAGCATGCAAAAGAAGCAGA...GGTCACTTCTGAATACTCGTTTGGTAAATAATATTGCCTGTTCTCACTATAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | GAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATCTCCACCAAGATCAATaGTCTCTTCATGGTACAATG | + |
Preference number: 4 (lower is better) Translates to: ERKTISRSFTFCKVEKAHLHQDQ*SLHGTM Trigger: CATTGTACCATGAAGAGACCATTGATCTTGGTGGAG...ATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | TTTACATTTTGCAAAGTGGAAAAAGCGCATACAAGCGTTAAGCAATTCTCTTGCTCCATCTCAGCATTCTaGAAAAGGCCCAACTTCACC | + |
Preference number: 4 (lower is better) Translates to: FTFCKVEKAHTSVKQFSCSISAF*KRPNFT Trigger: GGTGAAGTTGGGCCTTTTCCAGAATGCTGAGATGGA...GCAAGAGAATTGCTTAACGCTTGTATGCGCTTTTTCCACTTTGCAAAATGTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR TCA 90 bp | GAGCTGAATAATCAAAGCAATACTTTTGTTTGGGATATGGAGGGAGGAAGACAATTAACTGCATCTCCCTaGATGTTGTCAAACTTGAGG | + |
Preference number: 4 (lower is better) Translates to: ELNNQSNTFVWDMEGGRQLTASP*MLSNLR Trigger: CCTCAAGTTTGACAACATTCAGGGAGATGCAGTTAA...TTGTCTTCCTCCCTCCATATCCCAAACAAAAGTATTGCTTTGATTATTCAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CCA 90 bp | TTTACATTTTGCAAAGTGGAAAAAGCGCATACAAGCGTTAAGCAATTCTCTTGCCCAGCAAACACAGCCTaGATCTGTGAAAATGGCTTT | + |
Preference number: 4 (lower is better) Translates to: FTFCKVEKAHTSVKQFSCPANTA*ICENGF Trigger: AAAGCCATTTTCACAGATCCAGGCTGTGTTTGCTGG...GCAAGAGAATTGCTTAACGCTTGTATGCGCTTTTTCCACTTTGCAAAATGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS TCA 90 bp | GGCTGGTGGGCAGCCCATTCTTGCCATAGCCTTGTCCGTGGGCTGTaGGCAGGCGTCCACACAGGTCGACTGCTGCCCTCCAGTTCCTGC | + |
Preference number: 5 (lower is better) Translates to: GWWAAHSCHSLVRGL*AGVHTGRLLPSSSC Trigger: GCAGGAACTGGAGGGCAGCAGTCGACCTGTGTGGACGCCTGCTCACAGCCCACGGACAAGGCTATGGCAAGAATGGGCTGCCCACCAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS GCA 90 bp | GCCTTGTCCGTGGGCTGTGAGCAGGCGTCCACACAGGTCGACTGCTaGCCTCCAGTTCCTGCAGCTAATGAGCTGCTTCAGCCCCACAAA | + |
Preference number: 5 (lower is better) Translates to: ALSVGCEQASTQVDC*PPVPAANELLQPHK Trigger: TTTGTGGGGCTGAAGCAGCTCATTAGCTGCAGGAACTGGAGGGCAGCAGTCGACCTGTGTGGACGCCTGCTCACAGCCCACGGACAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS GCA 90 bp | ATAGCCTTGTCCGTGGGCTGTGAGCAGGCGTCCACACAGGTCGACTaGTGCCCTCCAGTTCCTGCAGCTAATGAGCTGCTTCAGCCCCAC | + |
Preference number: 5 (lower is better) Translates to: IALSVGCEQASTQVD*CPPVPAANELLQPH Trigger: GTGGGGCTGAAGCAGCTCATTAGCTGCAGGAACTGGAGGGCAGCAGTCGACCTGTGTGGACGCCTGCTCACAGCCCACGGACAAGGCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS-3UTR CAA 90 bp | TGCAACTGCATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCAGCCGAACAGCTGAACAGAGGCTaGCCTGCTTTCCTGGGTGAC | + |
Preference number: 5 (lower is better) Translates to: CNCMVGRSAGLRVAQPAEQLNRG*PAFLGD Trigger: GTCACCCAGGAAAGCAGGCAAGCCTCTGTTCAGCTG...TTCGGCTGGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCATGCAGTTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | ATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCAGCCGAAGGCATGCTCAAGTTGGCCAAGATCTaGCTGCAGACGGTCTTGACC | + |
Preference number: 5 (lower is better) Translates to: MVGRSAGLRVAQPAEGMLKLAKI*LQTVLT Trigger: GGTCAAGACCGTCTGCAGCAAGATCTTGGCCAACTT...GAGCATGCCTTCGGCTGGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS TCA 90 bp | TTTGCCATGGAGTACAGCACACGGCCCAGACGAGACCTCCACAGCTaGACAGAGGCTTGCCTGCTTTCCTGGGTGACGCTGCTCAGACCA | + |
Preference number: 5 (lower is better) Translates to: FAMEYSTRPRRDLHS*TEACLLSWVTLLRP Trigger: TGGTCTGAGCAGCGTCACCCAGGAAAGCAGGCAAGCCTCTGTTCAGCTGTGGAGGTCTCGTCTGGGCCGTGTGCTGTACTCCATGGCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | ATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCAGCCGAAGGCATGCTCTCTTTTGCATGCTCCTaGAGGACTCCAGCTCGTACA | + |
Preference number: 5 (lower is better) Translates to: MVGRSAGLRVAQPAEGMLSFACS*RTPART Trigger: TGTACGAGCTGGAGTCCTCAAGGAGCATGCAAAAGA...GAGCATGCCTTCGGCTGGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | TGCAACTGCATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCAGCCGAAAAGCTGTCCCCTTCTTaGCTAGCAACGGCCTCAAGT | + |
Preference number: 5 (lower is better) Translates to: CNCMVGRSAGLRVAQPAEKLSPS*LATASS Trigger: ACTTGAGGCCGTTGCTAGCAAAGAAGGGGACAGCTT...TTCGGCTGGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCATGCAGTTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS TCA 90 bp | TTTGCATGCTCCTTGAGGACTCCAGCTCGTACATGGTGGTCAGGTTaGAGAGCACGCTCTCGTGCAGGTAGTGCCTGGGGTCCTGCTGCA | + |
Preference number: 5 (lower is better) Translates to: FACSLRTPARTWWSG*RARSRAGSAWGPAA Trigger: TGCAGCAGGACCCCAGGCACTACCTGCACGAGAGCGTGCTCTTCAACCTGACCACCATGTACGAGCTGGAGTCCTCAAGGAGCATGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS GCA 90 bp | CCTGACTGGGAAGCCATGCGTCATTCCTCCGGTCCATCTCACTCATaGTCAGGGCTGTGGCGAAGGGGTCATCACTTCCAGCAAACACAG | + |
Preference number: 5 (lower is better) Translates to: PDWEAMRHSSGPSHS*SGLWRRGHHFQQTQ Trigger: CTGTGTTTGCTGGAAGTGATGACCCCTTCGCCACAGCCCTGAGCATGAGTGAGATGGACCGGAGGAATGACGCATGGCTTCCCAGTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS GCA 90 bp | GGCATCCACAGCCAGCACATAGTCCTTCATCAGGAGCAGACAGTTTaGCATGGAGTACAGCACACGGCCCAGACGAGACCTCCACAGCTG | + |
Preference number: 5 (lower is better) Translates to: GIHSQHIVLHQEQTV*HGVQHTAQTRPPQL Trigger: CAGCTGTGGAGGTCTCGTCTGGGCCGTGTGCTGTACTCCATGGCAAACTGTCTGCTCCTGATGAAGGACTATGTGCTGGCTGTGGATGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS CCA 90 bp | GCCATGCGTCATTCCTCCGGTCCATCTCACTCATGCTCAGGGCTGTaGCGAAGGGGTCATCACTTCCAGCAAACACAGCCTGGATCTGTG | + |
Preference number: 5 (lower is better) Translates to: AMRHSSGPSHSCSGL*RRGHHFQQTQPGSV Trigger: CACAGATCCAGGCTGTGTTTGCTGGAAGTGATGACCCCTTCGCCACAGCCCTGAGCATGAGTGAGATGGACCGGAGGAATGACGCATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS-3UTR CAA 90 bp | CCCCACTGCTCCAGCATTGAGTGGTCACTGGTGCAGGCCACTAGTAGCGTTGCTATTCTTGCCATAGCCTaGTCCGTGGGCTGTGAGCAG | + |
Preference number: 5 (lower is better) Translates to: PHCSSIEWSLVQATSSVAILAIA*SVGCEQ Trigger: CTGCTCACAGCCCACGGACAAGGCTATGGCAAGAAT...AGCAACGCTACTAGTGGCCTGCACCAGTGACCACTCAATGCTGGAGCAGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS TCA 90 bp | CTCCCGAGACATAGGCTCCGGGATGTTTTCAGGACCTGCCTGGGCTaGAGGAGATGCCTCACTTGGGCTCTGCTCACCATCTTTAGCTGT | + |
Preference number: 5 (lower is better) Translates to: LPRHRLRDVFRTCLG*RRCLTWALLTIFSC Trigger: ACAGCTAAAGATGGTGAGCAGAGCCCAAGTGAGGCATCTCCTTCAGCCCAGGCAGGTCCTGAAAACATCCCGGAGCCTATGTCTCGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS TCA 90 bp | GACGAGACCTCCACAGCTGAACAGAGGCTTGCCTGCTTTCCTGGGTaGCGCTGCTCAGACCACCATCTTCAGCTAAGCCTTGCTCCAAGT | + |
Preference number: 5 (lower is better) Translates to: DETSTAEQRLACFPG*RCSDHHLQLSLAPS Trigger: ACTTGGAGCAAGGCTTAGCTGAAGATGGTGGTCTGAGCAGCGTCACCCAGGAAAGCAGGCAAGCCTCTGTTCAGCTGTGGAGGTCTCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS CCA 90 bp | TCCTCCTCCCGAGACATAGGCTCCGGGATGTTTTCAGGACCTGCCTaGGCTGAAGGAGATGCCTCACTTGGGCTCTGCTCACCATCTTTA | + |
Preference number: 5 (lower is better) Translates to: SSSRDIGSGMFSGPA*AEGDASLGLCSPSL Trigger: TAAAGATGGTGAGCAGAGCCCAAGTGAGGCATCTCCTTCAGCCCAGGCAGGTCCTGAAAACATCCCGGAGCCTATGTCTCGGGAGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS-3UTR CAA 90 bp | AGTATTGTGCAACTGCATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCGTGTCCACCACTTCTTaGTCTGTGCTACTGGGCAGT | + |
Preference number: 5 (lower is better) Translates to: SIVQLHGRQVSGSEGSPAVSTTS*SVLLGS Trigger: ACTGCCCAGTAGCACAGACAAAGAAGTGGTGGACAC...GGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCATGCAGTTGCACAATACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | CTACCTGGGGGCCTTCTGGAAGGTAGGCTTCCCACAGGGAAGAGGCTTCTCAGACCGATCTATCCATCCTaGTGGAGTAAGATGGGCTGG | + |
Preference number: 5 (lower is better) Translates to: LPGGLLEGRLPTGKRLLRPIYPS*WSKMGW Trigger: CCAGCCCATCTTACTCCACAAGGATGGATAGATCGG...TCTGAGAAGCCTCTTCCCTGTGGGAAGCCTACCTTCCAGAAGGCCCCCAGGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CAA 90 bp | TGCAGGCCACTAGTAGCGTTGCTCAGCACAGCAGGCCAGGCCTGGTCAGGATGTTTAAGACCTGTCTCTTaGCTGCAGCCTTCTCACCCA | + |
Preference number: 5 (lower is better) Translates to: CRPLVALLSTAGQAWSGCLRPVS*LQPSHP Trigger: TGGGTGAGAAGGCTGCAGCAAAGAGACAGGTCTTAA...ACATCCTGACCAGGCCTGGCCTGCTGTGCTGAGCAACGCTACTAGTGGCCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS TCA 90 bp | GGACCATCGGAGGAGGGGTCTTGGCTGACGTCTCACTGGTGCTACTaGAACTGGGTGATTTCACCATCTGGGACTCGAAGCCATCCTGTA | + |
Preference number: 5 (lower is better) Translates to: GPSEEGSWLTSHWCY*NWVISPSGTRSHPV Trigger: TACAGGATGGCTTCGAGTCCCAGATGGTGAAATCACCCAGTTTCAGTAGCACCAGTGAGACGTCAGCCAAGACCCCTCCTCCGATGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS TCA 90 bp | CCATACTGCTGGGTTGCTACTGACATCAGGACTTCTCTGGTCGCCTaGCTGGGAAGCCATGCGTCATTCCTCCGGTCCATCTCACTCATG | + |
Preference number: 5 (lower is better) Translates to: PYCWVATDIRTSLVA*LGSHASFLRSISLM Trigger: CATGAGTGAGATGGACCGGAGGAATGACGCATGGCTTCCCAGTCAGGCGACCAGAGAAGTCCTGATGTCAGTAGCAACCCAGCAGTATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CCA 90 bp | CCAGAGGGGCCCGAGAAACACCTGATTCCGATCTATCCATCCTTGTaGAGTAAGATGGGCTGGTGGAATCCGGGGACTTCTCTCCTACAG | + |
Preference number: 5 (lower is better) Translates to: PEGPEKHLIPIYPSL*SKMGWWNPGTSLLQ Trigger: CTGTAGGAGAGAAGTCCCCGGATTCCACCAGCCCATCTTACTCCACAAGGATGGATAGATCGGAATCAGGTGTTTCTCGGGCCCCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CCA 90 bp | ACTGCTGGGTTGCTACTGACATCAGGACTTCTCTGGTCGCCTGACTaGGAAGCCATGCGTCATTCCTCCGGTCCATCTCACTCATGCTCA | + |
Preference number: 5 (lower is better) Translates to: TAGLLLTSGLLWSPD*EAMRHSSGPSHSCS Trigger: TGAGCATGAGTGAGATGGACCGGAGGAATGACGCATGGCTTCCCAGTCAGGCGACCAGAGAAGTCCTGATGTCAGTAGCAACCCAGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CCA 90 bp | ACACAGTGCCATACTGCTGGGTTGCTACTGACATCAGGACTTCTCTaGTCGCCTGACTGGGAAGCCATGCGTCATTCCTCCGGTCCATCT | + |
Preference number: 5 (lower is better) Translates to: TQCHTAGLLLTSGLL*SPDWEAMRHSSGPS Trigger: AGATGGACCGGAGGAATGACGCATGGCTTCCCAGTCAGGCGACCAGAGAAGTCCTGATGTCAGTAGCAACCCAGCAGTATGGCACTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS-3UTR CAA 90 bp | AGTATTGTGCAACTGCATGGTAGGCAGGTCAGCGGGTCTGAGGGTAGCCCAGCCTTAAGACCTGTCTCTTaGCTGCAGCCTTCTCACCCA | + |
Preference number: 5 (lower is better) Translates to: SIVQLHGRQVSGSEGSPALRPVS*LQPSHP Trigger: TGGGTGAGAAGGCTGCAGCAAAGAGACAGGTCTTAA...GGCTGGGCTACCCTCAGACCCGCTGACCTGCCTACCATGCAGTTGCACAATACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | GAACCCATGCCCTCAGATCGTGAGGCACAAATGATGCTCCGCTGCATCCCACAGAAGCCTTGCTCCAAGTaGGCCAAGATCTTGCTGCAG | + |
Preference number: 5 (lower is better) Translates to: EPMPSDREAQMMLRCIPQKPCSK*AKILLQ Trigger: CTGCAGCAAGATCTTGGCCAACTTGGAGCAAGGCTT...CTGTGGGATGCAGCGGAGCATCATTTGTGCCTCACGATCTGAGGGCATGGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | AGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCGTGAGGCATACATGGTGGTCAGGTaGAAGAGCACGCTCTCGTGC | + |
Preference number: 5 (lower is better) Translates to: SSFAYGAGVEPMPSDREAYMVVR*KSTLSC Trigger: GCACGAGAGCGTGCTCTTCAACCTGACCACCATGTA...TGCCTCACGATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | GTGACTTTGGCACCCTGCTTGACTCTGTATACAGCCCCTACCACTTGCTTGCCAAGGGGATGCATGTGCTaGCTGCAGACGGTCTTGACC | + |
Preference number: 5 (lower is better) Translates to: VTLAPCLTLYTAPTTCLPRGCMC*LQTVLT Trigger: GGTCAAGACCGTCTGCAGCAAGCACATGCATCCCCT...TGGCAAGCAAGTGGTAGGGGCTGTATACAGAGTCAAGCAGGGTGCCAAAGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS TCA 90 bp | TGTGGCGAAGGGGTCATCACTTCCAGCAAACACAGCCTGGATCTGTaGAAATGGCTTTGGAGATTCAGGGACATCCAGAGGGGCCCGAGA | + |
Preference number: 5 (lower is better) Translates to: CGEGVITSSKHSLDL*KWLWRFRDIQRGPR Trigger: TCTCGGGCCCCTCTGGATGTCCCTGAATCTCCAAAGCCATTTTCACAGATCCAGGCTGTGTTTGCTGGAAGTGATGACCCCTTCGCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CCA 90 bp | CTCAGGGCTGTGGCGAAGGGGTCATCACTTCCAGCAAACACAGCCTaGATCTGTGAAAATGGCTTTGGAGATTCAGGGACATCCAGAGGG | + |
Preference number: 5 (lower is better) Translates to: LRAVAKGSSLPANTA*ICENGFGDSGTSRG Trigger: CCCTCTGGATGTCCCTGAATCTCCAAAGCCATTTTCACAGATCCAGGCTGTGTTTGCTGGAAGTGATGACCCCTTCGCCACAGCCCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS-3UTR CAA 90 bp | AGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCGTGAGGCAGTGTCCACCACTTCTTaGTCTGTGCTACTGGGCAGT | + |
Preference number: 5 (lower is better) Translates to: SSFAYGAGVEPMPSDREAVSTTS*SVLLGS Trigger: ACTGCCCAGTAGCACAGACAAAGAAGTGGTGGACAC...TGCCTCACGATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | CCCATGCCCTCAGATCGTGAGGCACAAATGATGCTCCGCTGCATCCCACAGCCGTCTGTGAAAATGGCTTaGGAGATTCAGGGACATCCA | + |
Preference number: 5 (lower is better) Translates to: PMPSDREAQMMLRCIPQPSVKMA*EIQGHP Trigger: TGGATGTCCCTGAATCTCCAAAGCCATTTTCACAGA...CGGCTGTGGGATGCAGCGGAGCATCATTTGTGCCTCACGATCTGAGGGCATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | AGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCGTGAGGCATCAGGAGCAGACAGTTaGCCATGGAGTACAGCACAC | + |
Preference number: 5 (lower is better) Translates to: SSFAYGAGVEPMPSDREASGADS*PWSTAH Trigger: GTGTGCTGTACTCCATGGCAAACTGTCTGCTCCTGA...TGCCTCACGATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | GAAGAGCCAGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCAAGCTGTCCCCTTCTTaGCTAGCAACGGCCTCAAGT | + |
Preference number: 5 (lower is better) Translates to: EEPAVLLMELGWNPCPQIKLSPS*LATASS Trigger: ACTTGAGGCCGTTGCTAGCAAAGAAGGGGACAGCTT...GATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCTGGCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS TCA 90 bp | GTTCTCCTTGTCTATGAACACAGTGCCATACTGCTGGGTTGCTACTaGCATCAGGACTTCTCTGGTCGCCTGACTGGGAAGCCATGCGTC | + |
Preference number: 5 (lower is better) Translates to: VLLVYEHSAILLGCY*HQDFSGRLTGKPCV Trigger: GACGCATGGCTTCCCAGTCAGGCGACCAGAGAAGTCCTGATGTCAGTAGCAACCCAGCAGTATGGCACTGTGTTCATAGACAAGGAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS GCA 90 bp | TCCCCTTCTTTGCTAGCAACGGCCTCAAGTAGGCTCTGCTTCTTTTaGATGCTCCTTGAGGACTCCAGCTCGTACATGGTGGTCAGGTTG | + |
Preference number: 5 (lower is better) Translates to: SPSLLATASSRLCFF*MLLEDSSSYMVVRL Trigger: CAACCTGACCACCATGTACGAGCTGGAGTCCTCAAGGAGCATGCAAAAGAAGCAGAGCCTACTTGAGGCCGTTGCTAGCAAAGAAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | AGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCGTGAGGCATTAAGACCTGTCTCTTaGCTGCAGCCTTCTCACCCA | + |
Preference number: 5 (lower is better) Translates to: SSFAYGAGVEPMPSDREALRPVS*LQPSHP Trigger: TGGGTGAGAAGGCTGCAGCAAAGAGACAGGTCTTAA...TGCCTCACGATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS GCA 90 bp | TTGAAGCTGTCCCCTTCTTTGCTAGCAACGGCCTCAAGTAGGCTCTaGTTCTTTTGCATGCTCCTTGAGGACTCCAGCTCGTACATGGTG | + |
Preference number: 5 (lower is better) Translates to: LKLSPSLLATASSRL*FFCMLLEDSSSYMV Trigger: CACCATGTACGAGCTGGAGTCCTCAAGGAGCATGCAAAAGAAGCAGAGCCTACTTGAGGCCGTTGCTAGCAAAGAAGGGGACAGCTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | ATGTACACTTCGGTGTTTCCACCCAGTTTGTGTGGCTCCAGATGTCCTCCTGTCAAGGAGATGCCTCACTaGGGCTCTGCTCACCATCTT | + |
Preference number: 5 (lower is better) Translates to: MYTSVFPPSLCGSRCPPVKEMPH*GSAHHL Trigger: AAGATGGTGAGCAGAGCCCAAGTGAGGCATCTCCTT...GACAGGAGGACATCTGGAGCCACACAAACTGGGTGGAAACACCGAAGTGTACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CAA 90 bp | ATGCCATGCATATGGCTCACCTTCACCAACAGGCAGTATTGTGCAACTGCATGGATTCTTGCCATAGCCTaGTCCGTGGGCTGTGAGCAG | + |
Preference number: 5 (lower is better) Translates to: MPCIWLTFTNRQYCATAWILAIA*SVGCEQ Trigger: CTGCTCACAGCCCACGGACAAGGCTATGGCAAGAAT...CCATGCAGTTGCACAATACTGCCTGTTGGTGAAGGTGAGCCATATGCATGGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS CCA 90 bp | TGGGCTCGTTCTCTTCAGATGCAAACTCATCTCCACCAAGATCAATaGTCTCTTCATGGTACAATGGCTGGCTCTCCTCCTCCCGAGACA | + |
Preference number: 5 (lower is better) Translates to: WARSLQMQTHLHQDQ*SLHGTMAGSPPPET Trigger: TGTCTCGGGAGGAGGAGAGCCAGCCATTGTACCATGAAGAGACCATTGATCTTGGTGGAGATGAGTTTGCATCTGAAGAGAACGAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS-3UTR CAA 90 bp | AGCAGTTTTGCTTATGGAGCTGGGGTGGAACCCATGCCCTCAGATCGTGAGGCATCTGTGAAAATGGCTTaGGAGATTCAGGGACATCCA | + |
Preference number: 5 (lower is better) Translates to: SSFAYGAGVEPMPSDREASVKMA*EIQGHP Trigger: TGGATGTCCCTGAATCTCCAAAGCCATTTTCACAGA...TGCCTCACGATCTGAGGGCATGGGTTCCACCCCAGCTCCATAAGCAAAACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS GCA 90 bp | TGCTGCAGCCTTCTCACCCAGGAAGCGAAGCATCAAGTCTTTAACTaGATCTCCCTGAATGTTGTCAAACTTGAGGCCAGGCATAGTGAG | + |
Preference number: 5 (lower is better) Translates to: CCSLLTQEAKHQVFN*ISLNVVKLEARHSE Trigger: CTCACTATGCCTGGCCTCAAGTTTGACAACATTCAGGGAGATGCAGTTAAAGACTTGATGCTTCGCTTCCTGGGTGAGAAGGCTGCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS-3UTR CAA 90 bp | ATGTACACTTCGGTGTTTCCACCCAGTTTGTGTGGCTCCAGATGTCCTCCTGTCTCACATCTTCCTGTGTaGAGTCTTCCTTCAGAGAGG | + |
Preference number: 5 (lower is better) Translates to: MYTSVFPPSLCGSRCPPVSHLPV*SLPSER Trigger: CCTCTCTGAAGGAAGACTCAACACAGGAAGATGTGA...GACAGGAGGACATCTGGAGCCACACAAACTGGGTGGAAACACCGAAGTGTACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CAA 90 bp | ATGCCATGCATATGGCTCACCTTCACCAACAGGCAGTATTGTGCAACTGCATGGTCACATCTTCCTGTGTaGAGTCTTCCTTCAGAGAGG | + |
Preference number: 5 (lower is better) Translates to: MPCIWLTFTNRQYCATAWSHLPV*SLPSER Trigger: CCTCTCTGAAGGAAGACTCAACACAGGAAGATGTGA...CCATGCAGTTGCACAATACTGCCTGTTGGTGAAGGTGAGCCATATGCATGGCAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | GGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCCCGATCTATCCATCCTaGTGGAGTAAGATGGGCTGG | + |
Preference number: 5 (lower is better) Translates to: GNGRPFPGPLHFAKWKKRPIYPS*WSKMGW Trigger: CCAGCCCATCTTACTCCACAAGGATGGATAGATCGG...GCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | TGTACACTTCGGTGTTTCCACCCAGTTTGTGTGGCTCCAGATGTCCTCCTGTCTTCTGTGAAAATGGCTTaGGAGATTCAGGGACATCCA | + |
Preference number: 5 (lower is better) Translates to: CTLRCFHPVCVAPDVLLSSVKMA*EIQGHP Trigger: TGGATGTCCCTGAATCTCCAAAGCCATTTTCACAGA...AGACAGGAGGACATCTGGAGCCACACAAACTGGGTGGAAACACCGAAGTGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS-3UTR CAA 90 bp | GAATTAGGAAAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAATACATGGTGGTCAGGTaGAAGAGCACGCTCTCGTGC | + |
Preference number: 5 (lower is better) Translates to: ELGKLGTEDHFQVLYILQYMVVR*KSTLSC Trigger: GCACGAGAGCGTGCTCTTCAACCTGACCACCATGTA...TTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTTTCCTAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS TCA 90 bp | AGCACACTTTCCATCATGTGCTCATTAAGCTTATCTCCGAAGTTGTaGGACCCTTCCGATGTGGGCTCGTTCTCTTCAGATGCAAACTCA | + |
Preference number: 5 (lower is better) Translates to: STLSIMCSLSLSPKL*DPSDVGSFSSDANS Trigger: TGAGTTTGCATCTGAAGAGAACGAGCCCACATCGGAAGGGTCTCACAACTTCGGAGATAAGCTTAATGAGCACATGATGGAAAGTGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS-3UTR CAA 90 bp | AAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAAGGAGATGCCTCACTaGGGCTCTGCTCACCATCTT | + |
Preference number: 5 (lower is better) Translates to: KLGTEDHFQVLYILQSGKKEMPH*GSAHHL Trigger: AAGATGGTGAGCAGAGCCCAAGTGAGGCATCTCCTT...TTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | GAATTAGGAAAGCTGGGAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAAGGAGATGCCTCACTaGGGCTCTGCTCACCATCTT | + |
Preference number: 5 (lower is better) Translates to: ELGKLGTEDHFQVLYILQKEMPH*GSAHHL Trigger: AAGATGGTGAGCAGAGCCCAAGTGAGGCATCTCCTT...TTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTCCCAGCTTTCCTAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | AACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATAATTCTTGCCATAGCCTaGTCCGTGGGCTGTGAGCAG | + |
Preference number: 5 (lower is better) Translates to: NGRPFPGPLHFAKWKKRIILAIA*SVGCEQ Trigger: CTGCTCACAGCCCACGGACAAGGCTATGGCAAGAAT...TATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | GAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATACAAGCCGATCTATCCATCCTaGTGGAGTAAGATGGGCTGG | + |
Preference number: 5 (lower is better) Translates to: EDHFQVLYILQSGKSAYKPIYPS*WSKMGW Trigger: CCAGCCCATCTTACTCCACAAGGATGGATAGATCGG...CTTGTATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | AACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATAAAGCCTTGCTCCAAGTaGGCCAAGATCTTGCTGCAG | + |
Preference number: 5 (lower is better) Translates to: NGRPFPGPLHFAKWKKRIKPCSK*AKILLQ Trigger: CTGCAGCAAGATCTTGGCCAACTTGGAGCAAGGCTT...TATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | TTTACATTTTGCAAAGTGGAAAAAGCGCATACAAGCGTTAAGCAATTCTCTTGCCAGCTGAACAGAGGCTaGCCTGCTTTCCTGGGTGAC | + |
Preference number: 5 (lower is better) Translates to: FTFCKVEKAHTSVKQFSCQLNRG*PAFLGD Trigger: GTCACCCAGGAAAGCAGGCAAGCCTCTGTTCAGCTG...GCAAGAGAATTGCTTAACGCTTGTATGCGCTTTTTCCACTTTGCAAAATGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS TCA 90 bp | ACTGCATTTGTTGGGTCCATTCTCAAAATCTCTGTGAAGAACTTGTaGGCTTCTGCGAAGTTATTCTGGCCAAGGTACAGAAAGGCTCTG | + |
Preference number: 5 (lower is better) Translates to: TAFVGSILKISVKNL*ASAKLFWPRYRKAL Trigger: CAGAGCCTTTCTGTACCTTGGCCAGAATAACTTCGCAGAAGCTCACAAGTTCTTCACAGAGATTTTGAGAATGGACCCAACAAATGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS TCA 90 bp | TGTTGTTGGCCACTGCATTTGTTGGGTCCATTCTCAAAATCTCTGTaGAGAACTTGTGAGCTTCTGCGAAGTTATTCTGGCCAAGGTACA | + |
Preference number: 5 (lower is better) Translates to: CCWPLHLLGPFSKSL*RTCELLRSYSGQGT Trigger: TGTACCTTGGCCAGAATAACTTCGCAGAAGCTCACAAGTTCTTCACAGAGATTTTGAGAATGGACCCAACAAATGCAGTGGCCAACAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | GAACGGAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATTCACATCTTCCTGTGTaGAGTCTTCCTTCAGAGAGG | + |
Preference number: 5 (lower is better) Translates to: ERKTISRSFTFCKVEKAHSHLPV*SLPSER Trigger: CCTCTCTGAAGGAAGACTCAACACAGGAAGATGTGA...ATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTCCGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | GAGCTGAATAATCAAAGCAATACTTTTGTTTGGGATATGGAGGGAGGAAGACAATCAGGAGCAGACAGTTaGCCATGGAGTACAGCACAC | + |
Preference number: 5 (lower is better) Translates to: ELNNQSNTFVWDMEGGRQSGADS*PWSTAH Trigger: GTGTGCTGTACTCCATGGCAAACTGTCTGCTCCTGA...TTGTCTTCCTCCCTCCATATCCCAAACAAAAGTATTGCTTTGATTATTCAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS-3UTR CAA 90 bp | GAAGACCATTTCCAGGTCCTTTACATTTTGCAAAGTGGAAAAAGCGCATACAAGTCTTTTGCATGCTCCTaGAGGACTCCAGCTCGTACA | + |
Preference number: 5 (lower is better) Translates to: EDHFQVLYILQSGKSAYKSFACS*RTPART Trigger: TGTACGAGCTGGAGTCCTCAAGGAGCATGCAAAAGA...CTTGTATGCGCTTTTTCCACTTTGCAAAATGTAAAGGACCTGGAAATGGTCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS TCA 90 bp | AGACAGCTTTTCTGGAACTGGGGAACCTGCATTGGGATTACTGACTaGAATGAAAGTAGAAGTTGTGAAGGAATCAAAGAAGTCAGAGGC | + |
Preference number: 5 (lower is better) Translates to: RQLFWNWGTCIGITD*NESRSCEGIKEVRG Trigger: GCCTCTGACTTCTTTGATTCCTTCACAACTTCTACTTTCATTTCAGTCAGTAATCCCAATGCAGGTTCCCCAGTTCCAGAAAAGCTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS-3UTR CAA 90 bp | TTTACATTTTGCAAAGTGGAAAAAGCGCATACAAGCGTTAAGCAATTCTCTTGCAAGTTGGCCAAGATCTaGCTGCAGACGGTCTTGACC | + |
Preference number: 5 (lower is better) Translates to: FTFCKVEKAHTSVKQFSCKLAKI*LQTVLT Trigger: GGTCAAGACCGTCTGCAGCAAGATCTTGGCCAACTT...GCAAGAGAATTGCTTAACGCTTGTATGCGCTTTTTCCACTTTGCAAAATGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS TCA 72 bp | GCAGCCCATTCTTGCCATAGCCTTGTCCGTGGGCTGTaGGCAGGCGTCCACACAGGTCGACTGCTGCCCTCC | + |
Preference number: 6 (lower is better) Translates to: AAHSCHSLVRGL*AGVHTGRLLPS Trigger: GGAGGGCAGCAGTCGACCTGTGTGGACGCCTGCTCACAGCCCACGGACAAGGCTATGGCAAGAATGGGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CCA 72 bp | AGAAACAGGTGTGGCTGGGAGGGAGTGGCGGTAGCCTaGCTGAAGATGGTGCAGACGGGCAAGGGCTCGTCT | + |
Preference number: 6 (lower is better) Translates to: RNRCGWEGVAVA*LKMVQTGKGSS Trigger: AGACGAGCCCTTGCCCGTCTGCACCATCTTCAGCCAGGCTACCGCCACTCCCTCCCAGCCACACCTGTTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CAA 72 bp | ACGGCCCAGACGAGACCTCCACAGCTGAACAGAGGCTaGCCTGCTTTCCTGGGTGACGCTGCTCAGACCACC | + |
Preference number: 6 (lower is better) Translates to: TAQTRPPQLNRG*PAFLGDAAQTT Trigger: GGTGGTCTGAGCAGCGTCACCCAGGAAAGCAGGCAAGCCTCTGTTCAGCTGTGGAGGTCTCGTCTGGGCCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS GCA 72 bp | GTGGGCTGTGAGCAGGCGTCCACACAGGTCGACTGCTaGCCTCCAGTTCCTGCAGCTAATGAGCTGCTTCAG | + |
Preference number: 6 (lower is better) Translates to: VGCEQASTQVDC*PPVPAANELLQ Trigger: CTGAAGCAGCTCATTAGCTGCAGGAACTGGAGGGCAGCAGTCGACCTGTGTGGACGCCTGCTCACAGCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS GCA 72 bp | TCCGTGGGCTGTGAGCAGGCGTCCACACAGGTCGACTaGTGCCCTCCAGTTCCTGCAGCTAATGAGCTGCTT | + |
Preference number: 6 (lower is better) Translates to: SVGCEQASTQVD*CPPVPAANELL Trigger: AAGCAGCTCATTAGCTGCAGGAACTGGAGGGCAGCAGTCGACCTGTGTGGACGCCTGCTCACAGCCCACGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CAA 90 bp | GTACAGCACACGGCCCAGACGAGACCTCCACAGCTGAACAGAGGCTaGCCTGCTTTCCTGGGTGACGCTGCTCAGACCACCATCTTCAGC | + |
Preference number: 6 (lower is better) Translates to: VQHTAQTRPPQLNRG*PAFLGDAAQTTIFS Trigger: GCTGAAGATGGTGGTCTGAGCAGCGTCACCCAGGAAAGCAGGCAAGCCTCTGTTCAGCTGTGGAGGTCTCGTCTGGGCCGTGTGCTGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS TCA 72 bp | GTCGGAGGGGATGCATGTGCTTGCTGCAGACGGTCTTaGCCCTGTGTAATCGGTCCAGGGACTCCTGTGGGT | + |
Preference number: 6 (lower is better) Translates to: VGGDACACCRRS*PCVIGPGTPVG Trigger: ACCCACAGGAGTCCCTGGACCGATTACACAGGGTCAAGACCGTCTGCAGCAAGCACATGCATCCCCTCCGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS CCA 72 bp | AGACGGGCAAGGGCTCGTCTTTGGAGGAGGACTGATTaGAGGACACTTCTGAGGTCTGCTCTTCTCGGGGCG | + |
Preference number: 6 (lower is better) Translates to: RRARARLWRRTD*RTLLRSALLGA Trigger: CGCCCCGAGAAGAGCAGACCTCAGAAGTGTCCTCCAATCAGTCCTCCTCCAAAGACGAGCCCTTGCCCGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CCA 72 bp | TGGGACTCGAAGCCATCCTGTAGAAACAGGTGTGGCTaGGAGGGAGTGGCGGTAGCCTGGCTGAAGATGGTG | + |
Preference number: 6 (lower is better) Translates to: WDSKPSCRNRCG*EGVAVAWLKMV Trigger: CACCATCTTCAGCCAGGCTACCGCCACTCCCTCCCAGCCACACCTGTTTCTACAGGATGGCTTCGAGTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CAA 72 bp | AGTCGGAGGGGATGCATGTGCTTGCTGCAGACGGTCTaGACCCTGTGTAATCGGTCCAGGGACTCCTGTGGG | + |
Preference number: 6 (lower is better) Translates to: SRRGCMCLLQTV*TLCNRSRDSCG Trigger: CCCACAGGAGTCCCTGGACCGATTACACAGGGTCAAGACCGTCTGCAGCAAGCACATGCATCCCCTCCGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170994.3 |
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CDS TCA 72 bp | CTCGTCTTTGGAGGAGGACTGATTGGAGGACACTTCTaGGGTCTGCTCTTCTCGGGGCGCGAGGCTGTCCTT | + |
Preference number: 6 (lower is better) Translates to: LVFGGGLIGGHF*GLLFSGREAVL Trigger: AAGGACAGCCTCGCGCCCCGAGAAGAGCAGACCTCAGAAGTGTCCTCCAATCAGTCCTCCTCCAAAGACGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS TCA 72 bp | GTGCAGACGGGCAAGGGCTCGTCTTTGGAGGAGGACTaGTTGGAGGACACTTCTGAGGTCTGCTCTTCTCGG | + |
Preference number: 6 (lower is better) Translates to: VQTGKGSSLEED*LEDTSEVCSSR Trigger: CCGAGAAGAGCAGACCTCAGAAGTGTCCTCCAATCAGTCCTCCTCCAAAGACGAGCCCTTGCCCGTCTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS TCA 72 bp | TCCTTGAGGACTCCAGCTCGTACATGGTGGTCAGGTTaGAGAGCACGCTCTCGTGCAGGTAGTGCCTGGGGT | + |
Preference number: 6 (lower is better) Translates to: SLRTPARTWWSG*RARSRAGSAWG Trigger: ACCCCAGGCACTACCTGCACGAGAGCGTGCTCTTCAACCTGACCACCATGTACGAGCTGGAGTCCTCAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS GCA 72 bp | GAAGCCATGCGTCATTCCTCCGGTCCATCTCACTCATaGTCAGGGCTGTGGCGAAGGGGTCATCACTTCCAG | + |
Preference number: 6 (lower is better) Translates to: EAMRHSSGPSHS*SGLWRRGHHFQ Trigger: CTGGAAGTGATGACCCCTTCGCCACAGCCCTGAGCATGAGTGAGATGGACCGGAGGAATGACGCATGGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CCA 72 bp | CGAGACATAGGCTCCGGGATGTTTTCAGGACCTGCCTaGGCTGAAGGAGATGCCTCACTTGGGCTCTGCTCA | + |
Preference number: 6 (lower is better) Translates to: RDIGSGMFSGPA*AEGDASLGLCS Trigger: TGAGCAGAGCCCAAGTGAGGCATCTCCTTCAGCCCAGGCAGGTCCTGAAAACATCCCGGAGCCTATGTCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CAA 90 bp | AGGCATCCACAGCCAGCACATAGTCCTTCATCAGGAGCAGACAGTTaGCCATGGAGTACAGCACACGGCCCAGACGAGACCTCCACAGCT | + |
Preference number: 6 (lower is better) Translates to: RHPQPAHSPSSGADS*PWSTAHGPDETSTA Trigger: AGCTGTGGAGGTCTCGTCTGGGCCGTGTGCTGTACTCCATGGCAAACTGTCTGCTCCTGATGAAGGACTATGTGCTGGCTGTGGATGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS TCA 72 bp | TGGGTTGCTACTGACATCAGGACTTCTCTGGTCGCCTaGCTGGGAAGCCATGCGTCATTCCTCCGGTCCATC | + |
Preference number: 6 (lower is better) Translates to: WVATDIRTSLVA*LGSHASFLRSI Trigger: GATGGACCGGAGGAATGACGCATGGCTTCCCAGTCAGGCGACCAGAGAAGTCCTGATGTCAGTAGCAACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS TCA 72 bp | GCTCCAAGTTGGCCAAGATCTTGCTGCAGACGGTCTTaGCCCTGTGTAATCGGTCCAGGGACTCCTGTGGGT | + |
Preference number: 6 (lower is better) Translates to: APSWPRSCCRRS*PCVIGPGTPVG Trigger: ACCCACAGGAGTCCCTGGACCGATTACACAGGGTCAAGACCGTCTGCAGCAAGATCTTGGCCAACTTGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS GCA 72 bp | CATCAGGACTTCTCTGGTCGCCTGACTGGGAAGCCATaGGTCATTCCTCCGGTCCATCTCACTCATGCTCAG | + |
Preference number: 6 (lower is better) Translates to: HQDFSGRLTGKP*VIPPVHLTHAQ Trigger: CTGAGCATGAGTGAGATGGACCGGAGGAATGACGCATGGCTTCCCAGTCAGGCGACCAGAGAAGTCCTGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS GCA 72 bp | CGGTCCAGGGACTCCTGTGGGTTCCCCAGATACTGCTaGAGTTCTGCATGCAGAATACGCATCGAAAAGGGG | + |
Preference number: 6 (lower is better) Translates to: RSRDSCGFPRYC*SSACRIRIEKG Trigger: CCCCTTTTCGATGCGTATTCTGCATGCAGAACTGCAGCAGTATCTGGGGAACCCACAGGAGTCCCTGGACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CCA 72 bp | CTGGAGGAGAATGCGGCCGATTCCACTCAGCAGCTGTaGCTCCTGCTCCGGGTAGTACTTGATTACTGTGAG | + |
Preference number: 6 (lower is better) Translates to: LEENAADSTQQL*LLLRVVLDYCE Trigger: CTCACAGTAATCAAGTACTACCCGGAGCAGGAGCCACAGCTGCTGAGTGGAATCGGCCGCATTCTCCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS CAA 72 bp | TGTAGACAGCCGAGGTCGCCAACGTCCCCCTCGCTGTaGTTAGGAGAGTCGGAGATGAGCACACTTTCCATC | + |
Preference number: 6 (lower is better) Translates to: CRQPRSPTSPSL*LGESEMSTLSI Trigger: GATGGAAAGTGTGCTCATCTCCGACTCTCCTAACAACAGCGAGGGGGACGTTGGCGACCTCGGCTGTCTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CAA 72 bp | TGCTCCAAGTTGGCCAAGATCTTGCTGCAGACGGTCTaGACCCTGTGTAATCGGTCCAGGGACTCCTGTGGG | + |
Preference number: 6 (lower is better) Translates to: CSKLAKILLQTV*TLCNRSRDSCG Trigger: CCCACAGGAGTCCCTGGACCGATTACACAGGGTCAAGACCGTCTGCAGCAAGATCTTGGCCAACTTGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS CAA 72 bp | CAGCCAGCACATAGTCCTTCATCAGGAGCAGACAGTTaGCCATGGAGTACAGCACACGGCCCAGACGAGACC | + |
Preference number: 6 (lower is better) Translates to: QPAHSPSSGADS*PWSTAHGPDET Trigger: GGTCTCGTCTGGGCCGTGTGCTGTACTCCATGGCAAACTGTCTGCTCCTGATGAAGGACTATGTGCTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS TCA 72 bp | GAGGAGGGGTCTTGGCTGACGTCTCACTGGTGCTACTaGAACTGGGTGATTTCACCATCTGGGACTCGAAGC | + |
Preference number: 6 (lower is better) Translates to: EEGSWLTSHWCY*NWVISPSGTRS Trigger: GCTTCGAGTCCCAGATGGTGAAATCACCCAGTTTCAGTAGCACCAGTGAGACGTCAGCCAAGACCCCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CCA 72 bp | CCACCAAGATCAATGGTCTCTTCATGGTACAATGGCTaGCTCTCCTCCTCCCGAGACATAGGCTCCGGGATG | + |
Preference number: 6 (lower is better) Translates to: PPRSMVSSWYNG*LSSSRDIGSGM Trigger: CATCCCGGAGCCTATGTCTCGGGAGGAGGAGAGCCAGCCATTGTACCATGAAGAGACCATTGATCTTGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CCA 72 bp | TTGCTACTGACATCAGGACTTCTCTGGTCGCCTGACTaGGAAGCCATGCGTCATTCCTCCGGTCCATCTCAC | + |
Preference number: 6 (lower is better) Translates to: LLLTSGLLWSPD*EAMRHSSGPSH Trigger: GTGAGATGGACCGGAGGAATGACGCATGGCTTCCCAGTCAGGCGACCAGAGAAGTCCTGATGTCAGTAGCAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CAA 90 bp | CATCCAGAGGGGCCCGAGAAACACCTGATTCCGATCTATCCATCCTaGTGGAGTAAGATGGGCTGGTGGAATCCGGGGACTTCTCTCCTA | + |
Preference number: 6 (lower is better) Translates to: HPEGPEKHLIPIYPS*WSKMGWWNPGTSLL Trigger: TAGGAGAGAAGTCCCCGGATTCCACCAGCCCATCTTACTCCACAAGGATGGATAGATCGGAATCAGGTGTTTCTCGGGCCCCTCTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CAA 90 bp | AGACCACCATCTTCAGCTAAGCCTTGCTCCAAGTTGGCCAAGATCTaGCTGCAGACGGTCTTGACCCTGTGTAATCGGTCCAGGGACTCC | + |
Preference number: 6 (lower is better) Translates to: RPPSSAKPCSKLAKI*LQTVLTLCNRSRDS Trigger: GGAGTCCCTGGACCGATTACACAGGGTCAAGACCGTCTGCAGCAAGATCTTGGCCAACTTGGAGCAAGGCTTAGCTGAAGATGGTGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS CAA 90 bp | GTGACGCTGCTCAGACCACCATCTTCAGCTAAGCCTTGCTCCAAGTaGGCCAAGATCTTGCTGCAGACGGTCTTGACCCTGTGTAATCGG | + |
Preference number: 6 (lower is better) Translates to: VTLLRPPSSAKPCSK*AKILLQTVLTLCNR Trigger: CCGATTACACAGGGTCAAGACCGTCTGCAGCAAGATCTTGGCCAACTTGGAGCAAGGCTTAGCTGAAGATGGTGGTCTGAGCAGCGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS GCA 72 bp | TGCCATTACTCAGAGTGTCCACCACTTCTTTGTCTGTaGTACTGGGCAGTCGGTGATCAGTGGCACCTCTGG | + |
Preference number: 6 (lower is better) Translates to: CHYSECPPLLCL*YWAVGDQWHLW Trigger: CCAGAGGTGCCACTGATCACCGACTGCCCAGTAGCACAGACAAAGAAGTGGTGGACACTCTGAGTAATGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS GCA 72 bp | CGACTTCCTCCGTGGCAGCATTCTCCAGTGCAGGCATaGTCGTCACATCTTCCTGTGTTGAGTCTTCCTTCA | + |
Preference number: 6 (lower is better) Translates to: RLPPWQHSPVQA*SSHLPVLSLPS Trigger: TGAAGGAAGACTCAACACAGGAAGATGTGACGAGCATGCCTGCACTGGAGAATGCTGCCACGGAGGAAGTCG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS GCA 72 bp | TCCCCTTCTTTGCTAGCAACGGCCTCAAGTAGGCTCTaGTTCTTTTGCATGCTCCTTGAGGACTCCAGCTCG | + |
Preference number: 6 (lower is better) Translates to: SPSLLATASSRL*FFCMLLEDSSS Trigger: CGAGCTGGAGTCCTCAAGGAGCATGCAAAAGAAGCAGAGCCTACTTGAGGCCGTTGCTAGCAAAGAAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS CCA 72 bp | ATCTCCACCAAGATCAATGGTCTCTTCATGGTACAATaGCTGGCTCTCCTCCTCCCGAGACATAGGCTCCGG | + |
Preference number: 6 (lower is better) Translates to: ISTKINGLFMVQ*LALLLPRHRLR Trigger: CCGGAGCCTATGTCTCGGGAGGAGGAGAGCCAGCCATTGTACCATGAAGAGACCATTGATCTTGGTGGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CCA 72 bp | ATTCCGATCTATCCATCCTTGTGGAGTAAGATGGGCTaGTGGAATCCGGGGACTTCTCTCCTACAGGGGCAG | + |
Preference number: 6 (lower is better) Translates to: IPIYPSLWSKMG*WNPGTSLLQGQ Trigger: CTGCCCCTGTAGGAGAGAAGTCCCCGGATTCCACCAGCCCATCTTACTCCACAAGGATGGATAGATCGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CAA 72 bp | CTCAGACCACCATCTTCAGCTAAGCCTTGCTCCAAGTaGGCCAAGATCTTGCTGCAGACGGTCTTGACCCTG | + |
Preference number: 6 (lower is better) Translates to: LRPPSSAKPCSK*AKILLQTVLTL Trigger: CAGGGTCAAGACCGTCTGCAGCAAGATCTTGGCCAACTTGGAGCAAGGCTTAGCTGAAGATGGTGGTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS GCA 72 bp | TTGCTAGCAACGGCCTCAAGTAGGCTCTGCTTCTTTTaGATGCTCCTTGAGGACTCCAGCTCGTACATGGTG | + |
Preference number: 6 (lower is better) Translates to: LLATASSRLCFF*MLLEDSSSYMV Trigger: CACCATGTACGAGCTGGAGTCCTCAAGGAGCATGCAAAAGAAGCAGAGCCTACTTGAGGCCGTTGCTAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS CAA 72 bp | TCTCCAGTGCAGGCATGCTCGTCACATCTTCCTGTGTaGAGTCTTCCTTCAGAGAGGCTCTGCTATCAGGTG | + |
Preference number: 6 (lower is better) Translates to: SPVQACSSHLPV*SLPSERLCYQV Trigger: CACCTGATAGCAGAGCCTCTCTGAAGGAAGACTCAACACAGGAAGATGTGACGAGCATGCCTGCACTGGAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CAA 72 bp | TCTTCAGCTAAGCCTTGCTCCAAGTTGGCCAAGATCTaGCTGCAGACGGTCTTGACCCTGTGTAATCGGTCC | + |
Preference number: 6 (lower is better) Translates to: SSAKPCSKLAKI*LQTVLTLCNRS Trigger: GGACCGATTACACAGGGTCAAGACCGTCTGCAGCAAGATCTTGGCCAACTTGGAGCAAGGCTTAGCTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS CAA 90 bp | TGGCAGCATTCTCCAGTGCAGGCATGCTCGTCACATCTTCCTGTGTaGAGTCTTCCTTCAGAGAGGCTCTGCTATCAGGTGTCATGTCTG | + |
Preference number: 6 (lower is better) Translates to: WQHSPVQACSSHLPV*SLPSERLCYQVSCL Trigger: CAGACATGACACCTGATAGCAGAGCCTCTCTGAAGGAAGACTCAACACAGGAAGATGTGACGAGCATGCCTGCACTGGAGAATGCTGCCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS TCA 72 bp | TTCCTTCAGAGAGGCTCTGCTATCAGGTGTCATGTCTaGGATGTCTCTGGGAGTGTCGTCTCCATCGGTTTC | + |
Preference number: 6 (lower is better) Translates to: FLQRGSAIRCHV*DVSGSVVSIGF Trigger: GAAACCGATGGAGACGACACTCCCAGAGACATCTCAGACATGACACCTGATAGCAGAGCCTCTCTGAAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS TCA 72 bp | GGGGTCATCACTTCCAGCAAACACAGCCTGGATCTGTaGAAATGGCTTTGGAGATTCAGGGACATCCAGAGG | + |
Preference number: 6 (lower is better) Translates to: GVITSSKHSLDL*KWLWRFRDIQR Trigger: CCTCTGGATGTCCCTGAATCTCCAAAGCCATTTTCACAGATCCAGGCTGTGTTTGCTGGAAGTGATGACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS GCA 72 bp | CTGCAGCTAATGAGCTGCTTCAGCCCCACAAAGGACTaGTCCACTGAGCTGGCATTTAAGACCTGTCTCTTT | + |
Preference number: 6 (lower is better) Translates to: LQLMSCFSPTKD*STELAFKTCLF Trigger: AAAGAGACAGGTCTTAAATGCCAGCTCAGTGGAGCAGTCCTTTGTGGGGCTGAAGCAGCTCATTAGCTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CCA 72 bp | GTGGCGAAGGGGTCATCACTTCCAGCAAACACAGCCTaGATCTGTGAAAATGGCTTTGGAGATTCAGGGACA | + |
Preference number: 6 (lower is better) Translates to: VAKGSSLPANTA*ICENGFGDSGT Trigger: TGTCCCTGAATCTCCAAAGCCATTTTCACAGATCCAGGCTGTGTTTGCTGGAAGTGATGACCCCTTCGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CCA 72 bp | AGGTTCTCCTTGTCTATGAACACAGTGCCATACTGCTaGGTTGCTACTGACATCAGGACTTCTCTGGTCGCC | + |
Preference number: 6 (lower is better) Translates to: RFSLSMNTVPYC*VATDIRTSLVA Trigger: GGCGACCAGAGAAGTCCTGATGTCAGTAGCAACCCAGCAGTATGGCACTGTGTTCATAGACAAGGAGAACCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CAA 72 bp | TTCCAGCAAACACAGCCTGGATCTGTGAAAATGGCTTaGGAGATTCAGGGACATCCAGAGGGGCCCGAGAAA | + |
Preference number: 6 (lower is better) Translates to: FQQTQPGSVKMA*EIQGHPEGPEK Trigger: TTTCTCGGGCCCCTCTGGATGTCCCTGAATCTCCAAAGCCATTTTCACAGATCCAGGCTGTGTTTGCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CAA 72 bp | AGCTTCAGGCACTGTGTGTTGAAGCTGTCCCCTTCTTaGCTAGCAACGGCCTCAAGTAGGCTCTGCTTCTTT | + |
Preference number: 6 (lower is better) Translates to: SFRHCVLKLSPS*LATASSRLCFF Trigger: AAAGAAGCAGAGCCTACTTGAGGCCGTTGCTAGCAAAGAAGGGGACAGCTTCAACACACAGTGCCTGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS GCA 72 bp | GTGAGACCCTTCCGATGTGGGCTCGTTCTCTTCAGATaGAAACTCATCTCCACCAAGATCAATGGTCTCTTC | + |
Preference number: 6 (lower is better) Translates to: VRPFRCGLVLFR*KLISTKINGLF Trigger: GAAGAGACCATTGATCTTGGTGGAGATGAGTTTGCATCTGAAGAGAACGAGCCCACATCGGAAGGGTCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS GCA 72 bp | AGATGTCTCTGGGAGTGTCGTCTCCATCGGTTTCACTaGCATTACTCAGAGTGTCCACCACTTCTTTGTCTG | + |
Preference number: 6 (lower is better) Translates to: RCLWECRLHRFH*HYSECPPLLCL Trigger: CAGACAAAGAAGTGGTGGACACTCTGAGTAATGGCAGTGAAACCGATGGAGACGACACTCCCAGAGACATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS GCA 72 bp | GTGAGGTTCTCCTTGTCTATGAACACAGTGCCATACTaGTGGGTTGCTACTGACATCAGGACTTCTCTGGTC | + |
Preference number: 6 (lower is better) Translates to: VRFSLSMNTVPY*WVATDIRTSLV Trigger: GACCAGAGAAGTCCTGATGTCAGTAGCAACCCAGCAGTATGGCACTGTGTTCATAGACAAGGAGAACCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS TCA 72 bp | TCCATCATGTGCTCATTAAGCTTATCTCCGAAGTTGTaGGACCCTTCCGATGTGGGCTCGTTCTCTTCAGAT | + |
Preference number: 6 (lower is better) Translates to: SIMCSLSLSPKL*DPSDVGSFSSD Trigger: ATCTGAAGAGAACGAGCCCACATCGGAAGGGTCTCACAACTTCGGAGATAAGCTTAATGAGCACATGATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS TCA 72 bp | AGGAAGCGAAGCATCAAGTCTTTAACTGCATCTCCCTaGATGTTGTCAAACTTGAGGCCAGGCATAGTGAGG | + |
Preference number: 6 (lower is better) Translates to: RKRSIKSLTASP*MLSNLRPGIVR Trigger: CCTCACTATGCCTGGCCTCAAGTTTGACAACATTCAGGGAGATGCAGTTAAAGACTTGATGCTTCGCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |
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CDS CCA 72 bp | ACACACAGCAGCATTGTTGTTGGCCACTGCATTTGTTaGGTCCATTCTCAAAATCTCTGTGAAGAACTTGTG | + |
Preference number: 6 (lower is better) Translates to: THSSIVVGHCIC*VHSQNLCEELV Trigger: CACAAGTTCTTCACAGAGATTTTGAGAATGGACCCAACAAATGCAGTGGCCAACAACAATGCTGCTGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS GCA 72 bp | CATTCTCAAAATCTCTGTGAAGAACTTGTGAGCTTCTaGGAAGTTATTCTGGCCAAGGTACAGAAAGGCTCT | + |
Preference number: 6 (lower is better) Translates to: HSQNLCEELVSF*EVILAKVQKGS Trigger: AGAGCCTTTCTGTACCTTGGCCAGAATAACTTCGCAGAAGCTCACAAGTTCTTCACAGAGATTTTGAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 |
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CDS CAA 72 bp | AGTGAAGACAGCTTTTCTGGAACTGGGGAACCTGCATaGGGATTACTGACTGAAATGAAAGTAGAAGTTGTG | + |
Preference number: 6 (lower is better) Translates to: SEDSFSGTGEPA*GLLTEMKVEVV Trigger: CACAACTTCTACTTTCATTTCAGTCAGTAATCCCAATGCAGGTTCCCCAGTTCCAGAAAAGCTGTCTTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020954.15 ENSMUST00000168129.10 ENSMUST00000170994.3 |