Pregenerated sensors for TRAPPC11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038102Ensembl transcript IDs: ENSMUST00000039061.15, ENSMUST00000120987.2
Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCTGCTGCCTGTGCAGGCGTTTTTCCCTGCGGGATGCTGGAGTGTaGCAGACCCAGAGAGCTGCGCTGGATCTAAGGGGAGGCAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: LCCLCRRFSLRDAGV*QTQRAALDLRGGSS Trigger: ACTGCTGCCTCCCCTTAGATCCAGCGCAGCTCTCTGGGTCTGCCACACTCCAGCATCCCGCAGGGAAAAACGCCTGCACAGGCAGCAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR GCA 90 bp | CCTAGCAAGCATTTGTGCTCTGCTGCCTGTGCAGGCGTTTTTCCCTaGGGGATGCTGGAGTGTGGCAGACCCAGAGAGCTGCGCTGGATC | + |
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Preference number: 1 (lower is better) Translates to: PSKHLCSAACAGVFP*GMLECGRPRELRWI Trigger: GATCCAGCGCAGCTCTCTGGGTCTGCCACACTCCAGCATCCCGCAGGGAAAAACGCCTGCACAGGCAGCAGAGCACAAATGCTTGCTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR CCA 90 bp | ATTTGTGCTCTGCTGCCTGTGCAGGCGTTTTTCCCTGCGGGATGCTaGAGTGTGGCAGACCCAGAGAGCTGCGCTGGATCTAAGGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: ICALLPVQAFFPAGC*SVADPESCAGSKGR Trigger: CCTCCCCTTAGATCCAGCGCAGCTCTCTGGGTCTGCCACACTCCAGCATCCCGCAGGGAAAAACGCCTGCACAGGCAGCAGAGCACAAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR GCA 90 bp | GGAGGCAGCAGTGAGCGTGAGCTTTTGTTGTTGCACATCTGTCTCTaGAAAGTGCTTTGGAGCTGCTTCTCCCCCAGGGAGCTGTTCACC | + |
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Preference number: 1 (lower is better) Translates to: GGSSERELLLLHICL*KVLWSCFSPRELFT Trigger: GGTGAACAGCTCCCTGGGGGAGAAGCAGCTCCAAAGCACTTTGCAGAGACAGATGTGCAACAACAAAAGCTCACGCTCACTGCTGCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR GCA 90 bp | GCAGTGAGCGTGAGCTTTTGTTGTTGCACATCTGTCTCTGCAAAGTaGTTTGGAGCTGCTTCTCCCCCAGGGAGCTGTTCACCGCCAACT | + |
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Preference number: 1 (lower is better) Translates to: AVSVSFCCCTSVSAK*FGAASPPGSCSPPT Trigger: AGTTGGCGGTGAACAGCTCCCTGGGGGAGAAGCAGCTCCAAAGCACTTTGCAGAGACAGATGTGCAACAACAAAAGCTCACGCTCACTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR CCA 90 bp | GAGCGTGAGCTTTTGTTGTTGCACATCTGTCTCTGCAAAGTGCTTTaGAGCTGCTTCTCCCCCAGGGAGCTGTTCACCGCCAACTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: ERELLLLHICLCKVL*SCFSPRELFTANCS Trigger: TGAACAGTTGGCGGTGAACAGCTCCCTGGGGGAGAAGCAGCTCCAAAGCACTTTGCAGAGACAGATGTGCAACAACAAAAGCTCACGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR GCA 90 bp | AGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTGAGTTaGATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTGAT | + |
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Preference number: 1 (lower is better) Translates to: RGLTGWVTCRHTQVS*ISSVSHTWVSVSID Trigger: ATCAATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR GCA 90 bp | AAACATCTGTGCTCAAGGACTGAACAAACTCCTAGCAAGCATTTGTaGTCTGCTGCCTGTGCAGGCGTTTTTCCCTGCGGGATGCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: KHLCSRTEQTPSKHL*SAACAGVFPCGMLE Trigger: CTCCAGCATCCCGCAGGGAAAAACGCCTGCACAGGCAGCAGAGCACAAATGCTTGCTAGGAGTTTGTTCAGTCCTTGAGCACAGATGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR CCA 90 bp | TGCAGGCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTaGGTATCTGTTTCTATTGATGCTGGACATCAAGACACATTGCAC | + |
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Preference number: 1 (lower is better) Translates to: CRHTQVSCISSVSHT*VSVSIDAGHQDTLH Trigger: GTGCAATGTGTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGCCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR GCA 90 bp | TTTGCTGTTGTCCAGCATAAGAGAGGGACAGTTCAAAACGATGACTaGTTTCTTCTCAGTCAGCTCATGGAAGCAACTGCTGAGGGCACT | + |
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Preference number: 1 (lower is better) Translates to: FAVVQHKRGTVQNDD*FLLSQLMEATAEGT Trigger: AGTGCCCTCAGCAGTTGCTTCCATGAGCTGACTGAGAAGAAAGCAGTCATCGTTTTGAACTGTCCCTCTCTTATGCTGGACAACAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR TCA 90 bp | GAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTaGTGCTGGACATCAAGACACATTGCACTAACAGCAACGATGACC | + |
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Preference number: 1 (lower is better) Translates to: ELHLLCQPHLGICFY*CWTSRHIALTATMT Trigger: GGTCATCGTTGCTGTTAGTGCAATGTGTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR TCA 90 bp | ATCAGGTCCCCAGGACGCACACAAATGCACGTGTGGGTTGTAGTTTaGAACTTTCTAAAGGTAAATAGAGCACAGCTCTTAACTGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: IRSPGRTQMHVWVVV*NFLKVNRAQLLTAP Trigger: TGGAGCAGTTAAGAGCTGTGCTCTATTTACCTTTAGAAAGTTTCAAACTACAACCCACACGTGCATTTGTGTGCGTCCTGGGGACCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR GCA 90 bp | ACACTTGGGTATCTGTTTCTATTGATGCTGGACATCAAGACACATTaGACTAACAGCAACGATGACCTCACCCCTTTCACATCACATGAC | + |
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Preference number: 1 (lower is better) Translates to: TLGYLFLLMLDIKTH*TNSNDDLTPFTSHD Trigger: GTCATGTGATGTGAAAGGGGTGAGGTCATCGTTGCTGTTAGTGCAATGTGTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR-3UTR TCA 90 bp | TGCAGGCGTTTTTCCCTGCGGGATGCTGGAGTGTGGCAGACCCAGAGAGCTGCGCCAGTGGTCAGCTTCTaGGGGCTCTGCCTGAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: CRRFSLRDAGVWQTQRAAPVVSF*GLCLSP Trigger: GGGGCTCAGGCAGAGCCCTCAGAAGCTGACCACTGG...CGCAGCTCTCTGGGTCTGCCACACTCCAGCATCCCGCAGGGAAAAACGCCTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR CAA 90 bp | CCTGTGTCTGCACTAAGTACACAGGGGACTTACAGGGTGGGTCACTaGCAGGCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACAC | + |
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Preference number: 2 (lower is better) Translates to: PVSALSTQGTYRVGH*QAHPGELHLLCQPH Trigger: GTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTACTTAGTGCAGACACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR CAA 90 bp | GCGCTGGATCTAAGGGGAGGCAGCAGTGAGCGTGAGCTTTTGTTGTaGCACATCTGTCTCTGCAAAGTGCTTTGGAGCTGCTTCTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: ALDLRGGSSERELLL*HICLCKVLWSCFSP Trigger: GGGGGAGAAGCAGCTCCAAAGCACTTTGCAGAGACAGATGTGCAACAACAAAAGCTCACGCTCACTGCTGCCTCCCCTTAGATCCAGCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR CAA 90 bp | GCTGCGCTGGATCTAAGGGGAGGCAGCAGTGAGCGTGAGCTTTTGTaGTTGCACATCTGTCTCTGCAAAGTGCTTTGGAGCTGCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: AALDLRGGSSERELL*LHICLCKVLWSCFS Trigger: GGAGAAGCAGCTCCAAAGCACTTTGCAGAGACAGATGTGCAACAACAAAAGCTCACGCTCACTGCTGCCTCCCCTTAGATCCAGCGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR CAA 90 bp | AGAGCTGCGCTGGATCTAAGGGGAGGCAGCAGTGAGCGTGAGCTTTaGTTGTTGCACATCTGTCTCTGCAAAGTGCTTTGGAGCTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: RAALDLRGGSSEREL*LLHICLCKVLWSCF Trigger: GAAGCAGCTCCAAAGCACTTTGCAGAGACAGATGTGCAACAACAAAAGCTCACGCTCACTGCTGCCTCCCCTTAGATCCAGCGCAGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTGTCTCTGCAAAGTGCTTTGGAGCTGCTTCTCCCCCAGGGAGCTGTTCACCTTCTCAGTCAGCTCATaGAAGCAACTGCTGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ICLCKVLWSCFSPRELFTFSVSS*KQLLRA Trigger: TGCCCTCAGCAGTTGCTTCCATGAGCTGACTGAGAA...GGTGAACAGCTCCCTGGGGGAGAAGCAGCTCCAAAGCACTTTGCAGAGACAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGTCAGCTCATGGAAGCAACTGCTGAGGGCACTGCTGCGCCTTTCCCACTTGTGTTGCTGATGTTGTaGGCTATCTCCAATGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LSQLMEATAEGTAAPFPLVLLML*AISNAS Trigger: TGAAGCATTGGAGATAGCTCACAACATCAGCAACAC...AAGTGGGAAAGGCGCAGCAGTGCCCTCAGCAGTTGCTTCCATGAGCTGACTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAGGGACAGTTCAAAACGATGACTGCTTTCTTCTCAGTCAGCTCATGGAATCTGAGGGCTCTGCCTaGGCCCCTCCTCTCAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: KRGTVQNDDCFLLSQLMESEGSA*APPLKG Trigger: ACCCTTGAGAGGAGGGGCTCAGGCAGAGCCCTCAGA...TTCCATGAGCTGACTGAGAAGAAAGCAGTCATCGTTTTGAACTGTCCCTCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR CAA 90 bp | TGTAAACATCTGTGCTCAAGGACTGAACAAACTCCTAGCAAGCATTaGTGCTCTGCTGCCTGTGCAGGCGTTTTTCCCTGCGGGATGCTG | + |
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Preference number: 2 (lower is better) Translates to: CKHLCSRTEQTPSKH*CSAACAGVFPCGML Trigger: CAGCATCCCGCAGGGAAAAACGCCTGCACAGGCAGCAGAGCACAAATGCTTGCTAGGAGTTTGTTCAGTCCTTGAGCACAGATGTTTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR-3UTR CCA 90 bp | GTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTGAGTTGCATTAACTTTTCATCATaGTCAAAGCTACAGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: VHRGLTGWVTCRHTQVSCINFSS*SKLQPQ Trigger: CTGTGGCTGTAGCTTTGACCATGATGAAAAGTTAAT...GCAACTCACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR-3UTR CCA 90 bp | GCACTAAGTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTGTTCCTCTGAGCAGCTaGTATTATGTCCATGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: ALSTQGTYRVGHLQAHPGVPLSS*YYVHEK Trigger: TTTTTCATGGACATAATACCAGCTGCTCAGAGGAAC...ACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTACTTAGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR-3UTR CCA 90 bp | GCACTAAGTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTTCTGTCAGCCACACTTaGGTATCTGTTTCTATTGAT | + |
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Preference number: 2 (lower is better) Translates to: ALSTQGTYRVGHLQAHPGSVSHT*VSVSID Trigger: ATCAATAGAAACAGATACCCAAGTGTGGCTGACAGA...ACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTACTTAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR-3UTR TCA 90 bp | CACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATAACCATGAGTTCCTCTaGGCAGCTGGTATTATGTCC | + |
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Preference number: 2 (lower is better) Translates to: HPGELHLLCQPHLGICFYNHEFL*AAGIMS Trigger: GGACATAATACCAGCTGCTCAGAGGAACTCATGGTT...ATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR-3UTR TCA 90 bp | TTCTCAGTCAGCTCATGGAAGCAACTGCTGAGGGCACTGCTGCGCCTTTCCCACGCAACCATGCCCAAATaGGTAAAAATTTATACAACC | + |
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Preference number: 2 (lower is better) Translates to: FSVSSWKQLLRALLRLSHATMPK*VKIYTT Trigger: GGTTGTATAAATTTTTACTCATTTGGGCATGGTTGC...GTGGGAAAGGCGCAGCAGTGCCCTCAGCAGTTGCTTCCATGAGCTGACTGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR GCA 72 bp | GCTCTGCTGCCTGTGCAGGCGTTTTTCCCTGCGGGATaGTGGAGTGTGGCAGACCCAGAGAGCTGCGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: ALLPVQAFFPAG*WSVADPESCAG Trigger: TCCAGCGCAGCTCTCTGGGTCTGCCACACTCCAGCATCCCGCAGGGAAAAACGCCTGCACAGGCAGCAGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR CCA 72 bp | CTGCTGCCTGTGCAGGCGTTTTTCCCTGCGGGATGCTaGAGTGTGGCAGACCCAGAGAGCTGCGCTGGATCT | + |
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Preference number: 3 (lower is better) Translates to: LLPVQAFFPAGC*SVADPESCAGS Trigger: AGATCCAGCGCAGCTCTCTGGGTCTGCCACACTCCAGCATCCCGCAGGGAAAAACGCCTGCACAGGCAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR TCA 72 bp | AGCAGCTTCAAAGACGGCTCTCCAGTGGTCAGCTTCTaGGGGCTCTGCCTGAGCCCCTCCTCTCAAGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: SSFKDGSPVVSF*GLCLSPSSQGS Trigger: AGACCCTTGAGAGGAGGGGCTCAGGCAGAGCCCTCAGAAGCTGACCACTGGAGAGCCGTCTTTGAAGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR GCA 72 bp | CATTTGTGCTCTGCTGCCTGTGCAGGCGTTTTTCCCTaGGGGATGCTGGAGTGTGGCAGACCCAGAGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: HLCSAACAGVFP*GMLECGRPREL Trigger: CAGCTCTCTGGGTCTGCCACACTCCAGCATCCCGCAGGGAAAAACGCCTGCACAGGCAGCAGAGCACAAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR TCA 72 bp | AAGCTACAGCCACAGCAGACCTCCCAGGTAGTCTCTTaGCTCCGCTGTAAGAACACCAAGCGCCGGTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: KLQPQQTSQVVS*LRCKNTKRRSW Trigger: CCAGGACCGGCGCTTGGTGTTCTTACAGCGGAGTCAAGAGACTACCTGGGAGGTCTGCTGTGGCTGTAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR GCA 72 bp | ACAGGGTGGGTCACTTGCAGGCACACCCAGGTGAGTTaGATCTCCTCTGTCAGCCACACTTGGGTATCTGTT | + |
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Preference number: 3 (lower is better) Translates to: TGWVTCRHTQVS*ISSVSHTWVSV Trigger: AACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGCCTGCAAGTGACCCACCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR GCA 72 bp | TTGTTGCACATCTGTCTCTGCAAAGTGCTTTGGAGCTaGTTCTCCCCCAGGGAGCTGTTCACCGCCAACTGT | + |
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Preference number: 3 (lower is better) Translates to: LLHICLCKVLWS*FSPRELFTANC Trigger: ACAGTTGGCGGTGAACAGCTCCCTGGGGGAGAAGCAGCTCCAAAGCACTTTGCAGAGACAGATGTGCAACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR GCA 72 bp | TGCTCAAGGACTGAACAAACTCCTAGCAAGCATTTGTaGTCTGCTGCCTGTGCAGGCGTTTTTCCCTGCGGG | + |
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Preference number: 3 (lower is better) Translates to: CSRTEQTPSKHL*SAACAGVFPCG Trigger: CCCGCAGGGAAAAACGCCTGCACAGGCAGCAGAGCACAAATGCTTGCTAGGAGTTTGTTCAGTCCTTGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR GCA 72 bp | AGTGAGCGTGAGCTTTTGTTGTTGCACATCTGTCTCTaGAAAGTGCTTTGGAGCTGCTTCTCCCCCAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: SERELLLLHICL*KVLWSCFSPRE Trigger: CTCCCTGGGGGAGAAGCAGCTCCAAAGCACTTTGCAGAGACAGATGTGCAACAACAAAAGCTCACGCTCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR GCA 72 bp | GTGAGCTTTTGTTGTTGCACATCTGTCTCTGCAAAGTaGTTTGGAGCTGCTTCTCCCCCAGGGAGCTGTTCA | + |
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Preference number: 3 (lower is better) Translates to: VSFCCCTSVSAK*FGAASPPGSCS Trigger: TGAACAGCTCCCTGGGGGAGAAGCAGCTCCAAAGCACTTTGCAGAGACAGATGTGCAACAACAAAAGCTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR CCA 72 bp | ACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTaGGTATCTGTTTCTATTGATGCTGGACATCAAGAC | + |
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Preference number: 3 (lower is better) Translates to: TQVSCISSVSHT*VSVSIDAGHQD Trigger: GTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR GCA 72 bp | GTCCAGCATAAGAGAGGGACAGTTCAAAACGATGACTaGTTTCTTCTCAGTCAGCTCATGGAAGCAACTGCT | + |
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Preference number: 3 (lower is better) Translates to: VQHKRGTVQNDD*FLLSQLMEATA Trigger: AGCAGTTGCTTCCATGAGCTGACTGAGAAGAAAGCAGTCATCGTTTTGAACTGTCCCTCTCTTATGCTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR TCA 72 bp | CTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTaGTGCTGGACATCAAGACACATTGCACTAACAGCA | + |
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Preference number: 3 (lower is better) Translates to: LLCQPHLGICFY*CWTSRHIALTA Trigger: TGCTGTTAGTGCAATGTGTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR TCA 72 bp | CCAGGACGCACACAAATGCACGTGTGGGTTGTAGTTTaGAACTTTCTAAAGGTAAATAGAGCACAGCTCTTA | + |
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Preference number: 3 (lower is better) Translates to: PGRTQMHVWVVV*NFLKVNRAQLL Trigger: TAAGAGCTGTGCTCTATTTACCTTTAGAAAGTTTCAAACTACAACCCACACGTGCATTTGTGTGCGTCCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR GCA 72 bp | TATCTGTTTCTATTGATGCTGGACATCAAGACACATTaGACTAACAGCAACGATGACCTCACCCCTTTCACA | + |
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Preference number: 3 (lower is better) Translates to: YLFLLMLDIKTH*TNSNDDLTPFT Trigger: TGTGAAAGGGGTGAGGTCATCGTTGCTGTTAGTGCAATGTGTCTTGATGTCCAGCATCAATAGAAACAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR TCA 72 bp | GTGTTTGTAAGCAGGCCAGATGTGTTGCTGATGTTGTaGGCTATCTCCAATGCTTCATCACACATTTTTAAC | + |
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Preference number: 3 (lower is better) Translates to: VFVSRPDVLLML*AISNASSHIFN Trigger: GTTAAAAATGTGTGATGAAGCATTGGAGATAGCTCACAACATCAGCAACACATCTGGCCTGCTTACAAACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| 3UTR GCA 72 bp | AAGAAAGAATTTTTATTCTTACAGTGTAAACATCTGTaGTCAAGGACTGAACAAACTCCTAGCAAGCATTTG | + |
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Preference number: 3 (lower is better) Translates to: KKEFLFLQCKHL*SRTEQTPSKHL Trigger: CAAATGCTTGCTAGGAGTTTGTTCAGTCCTTGAGCACAGATGTTTACACTGTAAGAATAAAAATTCTTTCTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| CDS-3UTR TCA 90 bp | GTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTGAGTTGCTGCTTCTCCTTCCACTaGGGCTCGTCCCAGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VHRGLTGWVTCRHTQVSCCFSFH*GSSQSS Trigger: GCTGGACTGGGACGAGCCTCAGTGGAAGGAGAAGCA...GCAACTCACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR TCA 90 bp | GTCAGCTCATGGAAGCAACTGCTGAGGGCACTGCTGCGCCTTTCCCACTTGCCTAACCACACACCGGCCTaGCTCGCTGCCCAGAAACAG | + |
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Preference number: 4 (lower is better) Translates to: VSSWKQLLRALLRLSHLPNHTPA*LAAQKQ Trigger: CTGTTTCTGGGCAGCGAGTCAGGCCGGTGTGTGGTT...AGGCAAGTGGGAAAGGCGCAGCAGTGCCCTCAGCAGTTGCTTCCATGAGCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| CDS-3UTR GCA 90 bp | GTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTGAGTTGCTCCGCCCACAGCTTCTaGGCAGTCTTCACCGCTAAG | + |
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Preference number: 4 (lower is better) Translates to: VHRGLTGWVTCRHTQVSCSAHSF*AVFTAK Trigger: CTTAGCGGTGAAGACTGCGCAGAAGCTGTGGGCGGA...GCAACTCACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CCA 90 bp | AGTCAGCTCATGGAAGCAACTGCTGAGGGCACTGCTGCGCCTTTCCCACTTGCCAAGTGGATGCTCACCTaGCTTCAGGCCCGCAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SQLMEATAEGTAAPFPLAKWMLT*LQARSE Trigger: CTCACTGCGGGCCTGAAGCCAGGTGAGCATCCACTT...GGCAAGTGGGAAAGGCGCAGCAGTGCCCTCAGCAGTTGCTTCCATGAGCTGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| CDS-3UTR TCA 90 bp | CAGGCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTCCCGCTCCGAAGCAATaGCATCTTCCCCTGGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QAHPGELHLLCQPHLGICPAPKQ*HLPLAV Trigger: TACCGCCAGGGGAAGATGTCATTGCTTCGGAGCGGG...ACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR GCA 90 bp | TTCTCAGTCAGCTCATGGAAGCAACTGCTGAGGGCACTGCTGCGCCTTTCCCACAAAGACCTTGCAGCCTaGAGGGCTTCCTGGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FSVSSWKQLLRALLRLSHKDLAA*RASWED Trigger: GTCCTCCCAGGAAGCCCTGCAGGCTGCAAGGTCTTT...GTGGGAAAGGCGCAGCAGTGCCCTCAGCAGTTGCTTCCATGAGCTGACTGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
||
| CDS-3UTR GCA 90 bp | GTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTGAGTTGCCCTTTTGAAAGACCTTaGAGCCTGCAGGGCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VHRGLTGWVTCRHTQVSCPFERP*SLQGFL Trigger: CAGGAAGCCCTGCAGGCTGCAAGGTCTTTCAAAAGG...GCAACTCACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CCA 90 bp | GCACTAAGTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTGGCTCGTGTCGCAGGTaGACAGAGATGTTTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ALSTQGTYRVGHLQAHPGGSCRR*TEMFGT Trigger: AGTCCCAAACATCTCTGTCCACCTGCGACACGAGCC...ACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTACTTAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CCA 90 bp | CTCAGTCAGCTCATGGAAGCAACTGCTGAGGGCACTGCTGCGCCTTTCCCACTTGGCTCGTGTCGCAGGTaGACAGAGATGTTTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LSQLMEATAEGTAAPFPLGSCRR*TEMFGT Trigger: AGTCCCAAACATCTCTGTCCACCTGCGACACGAGCC...AAGTGGGAAAGGCGCAGCAGTGCCCTCAGCAGTTGCTTCCATGAGCTGACTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| CDS-3UTR TCA 90 bp | ATCTGTCTCTGCAAAGTGCTTTGGAGCTGCTTCTCCCCCAGGGAGCTGTTCACCGCTTTGGCCGCCTTTTaGAAGACCTTGCAGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ICLCKVLWSCFSPRELFTALAAF*KTLQPA Trigger: TGCAGGCTGCAAGGTCTTTCAAAAGGCGGCCAAAGC...GGTGAACAGCTCCCTGGGGGAGAAGCAGCTCCAAAGCACTTTGCAGAGACAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| CDS-3UTR TCA 90 bp | CTCAGTCAGCTCATGGAAGCAACTGCTGAGGGCACTGCTGCGCCTTTCCCACTTTGCTTGCCTGGATTATaGCGCTGTCCCAGTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSQLMEATAEGTAAPFPLCLPGL*RCPSGS Trigger: AGATCCACTGGGACAGCGTCATAATCCAGGCAAGCA...AAGTGGGAAAGGCGCAGCAGTGCCCTCAGCAGTTGCTTCCATGAGCTGACTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
||
| CDS-3UTR TCA 90 bp | GTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTGAGTTGCGACTTCTCGTGGGACTaGACAGTGACAACCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VHRGLTGWVTCRHTQVSCDFSWD*TVTTKQ Trigger: CTGTTTGGTTGTCACTGTTCAGTCCCACGAGAAGTC...GCAACTCACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR TCA 90 bp | AGTCAGCTCATGGAAGCAACTGCTGAGGGCACTGCTGCGCCTTTCCCACTTGCCGACTTCTCGTGGGACTaGACAGTGACAACCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SQLMEATAEGTAAPFPLADFSWD*TVTTKQ Trigger: CTGTTTGGTTGTCACTGTTCAGTCCCACGAGAAGTC...GGCAAGTGGGAAAGGCGCAGCAGTGCCCTCAGCAGTTGCTTCCATGAGCTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTGGCACCAGGTTCAGGTaGTTATTCATCCAGCCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QAHPGELHLLCQPHLGICGTRFR*LFIQPV Trigger: GACGGGCTGGATGAATAAGCACCTGAACCTGGTGCC...ACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CCA 90 bp | GCACTAAGTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTCTTCACATCCCTGATTaGGGACTTCTCGTGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: ALSTQGTYRVGHLQAHPGLHIPD*GLLVGL Trigger: CAGTCCCACGAGAAGTCCCCAATCAGGGATGTGAAG...ACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTACTTAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| 3UTR CAA 72 bp | TACAGGGTGGGTCACTTGCAGGCACACCCAGGTGAGTaGCATCTCCTCTGTCAGCCACACTTGGGTATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YRVGHLQAHPGE*HLLCQPHLGIC Trigger: ACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGCCTGCAAGTGACCCACCCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| 3UTR CAA 72 bp | GCACTAAGTACACAGGGGACTTACAGGGTGGGTCACTaGCAGGCACACCCAGGTGAGTTGCATCTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALSTQGTYRVGH*QAHPGELHLLC Trigger: ACAGAGGAGATGCAACTCACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTACTTAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR TCA 90 bp | GCACTAAGTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTTACTCCTCTCCCATCTaGACCATGAGGTGGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALSTQGTYRVGHLQAHPGYSSPI*TMRWLF Trigger: GAAAAGCCACCTCATGGTTCAGATGGGAGAGGAGTA...ACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTACTTAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR GCA 90 bp | CAGGCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTCTATCTGGAAGACATTaGTGCCAGCCAGAGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: QAHPGELHLLCQPHLGICLSGRH*CQPERP Trigger: GGGTCTCTCTGGCTGGCAGCAATGTCTTCCAGATAG...ACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR GCA 90 bp | CAGGCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTAAGTCGGTCTTATTCTaGAGGTGGTACCTGACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QAHPGELHLLCQPHLGICKSVLF*RWYLTG Trigger: GCCCGTCAGGTACCACCTGCAGAATAAGACCGACTT...ACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR CCA 90 bp | CAGGCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTGTCTTATTCTGCAGGTaGTACCTGACGGGCAACGAC | + |
|
Preference number: 4 (lower is better) Translates to: QAHPGELHLLCQPHLGICVLFCR*YLTGND Trigger: GTCGTTGCCCGTCAGGTACCACCTGCAGAATAAGAC...ACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR CAA 72 bp | GCTTTTGTTGTTGCACATCTGTCTCTGCAAAGTGCTTaGGAGCTGCTTCTCCCCCAGGGAGCTGTTCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: AFVVAHLSLQSA*ELLLPQGAVHR Trigger: GCGGTGAACAGCTCCCTGGGGGAGAAGCAGCTCCAAAGCACTTTGCAGAGACAGATGTGCAACAACAAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGTCAGCTCATGGAAGCAACTGCTGAGGGCACTGCTGCGCCTTTCCCACTTCGTGGGACTGAACAGTaGCAACCAAACAGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSQLMEATAEGTAAPFPLRGTEQ*QPNSTS Trigger: AGATGTACTGTTTGGTTGTCACTGTTCAGTCCCACG...AAGTGGGAAAGGCGCAGCAGTGCCCTCAGCAGTTGCTTCCATGAGCTGACTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| CDS-3UTR GCA 90 bp | GCACTAAGTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTCTGGGCATAGTAAGCTaGCTGCTGATAGTAGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: ALSTQGTYRVGHLQAHPGLGIVS*LLIVET Trigger: GGTTTCTACTATCAGCAGGCAGCTTACTATGCCCAG...ACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTACTTAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR GCA 90 bp | CACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTTGAGCGACGGCAGCTaGTGGTACCCAGCCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPGELHLLCQPHLGICFYLSDGS*WYPAIR Trigger: TCTGATGGCTGGGTACCAGCAGCTGCCGTCGCTCAA...ATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR CAA 72 bp | CTAAGGGGAGGCAGCAGTGAGCGTGAGCTTTTGTTGTaGCACATCTGTCTCTGCAAAGTGCTTTGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRGGSSERELLL*HICLCKVLWSC Trigger: GCAGCTCCAAAGCACTTTGCAGAGACAGATGTGCAACAACAAAAGCTCACGCTCACTGCTGCCTCCCCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
||
| 3UTR CAA 72 bp | CTGTGCTCAAGGACTGAACAAACTCCTAGCAAGCATTaGTGCTCTGCTGCCTGTGCAGGCGTTTTTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCSRTEQTPSKH*CSAACAGVFPC Trigger: GCAGGGAAAAACGCCTGCACAGGCAGCAGAGCACAAATGCTTGCTAGGAGTTTGTTCAGTCCTTGAGCACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| CDS-3UTR TCA 90 bp | GCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCCTTTTAACTGGGCCATaGGGTAGGAACACTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AHPGELHLLCQPHLGICFLLTGP*GRNTSG Trigger: CCCTGAAGTGTTCCTACCTCATGGCCCAGTTAAAAG...GAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR TCA 90 bp | CTAAAGGTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGAAACCACACACCGGCCTaGCTCGCTGCCCAGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LKVNRAQLLTAPMNPSPRNHTPA*LAAQKQ Trigger: CTGTTTCTGGGCAGCGAGTCAGGCCGGTGTGTGGTT...TCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTACCTTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR TCA 90 bp | CAGGCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTGGGACTCTGGAAATaGTCATTGTGCTTGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QAHPGELHLLCQPHLGICLGLWK*SLCLPG Trigger: TCCAGGCAAGCACAATGATCATTTCCAGAGTCCCAA...ACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR GCA 90 bp | GCACTAAGTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTAATGGCAAGAATCCCTaGTTTCTCTTTCTCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALSTQGTYRVGHLQAHPGNGKNP*FLFLRV Trigger: GACCCTGAGAAAGAGAAAGCAGGGATTCTTGCCATT...ACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTACTTAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR GCA 90 bp | CACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTCTGGAAGACATTGCTaGCAGCCAGAGAGACCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HPGELHLLCQPHLGICFYSGRHC*QPERPG Trigger: ACCGGGTCTCTCTGGCTGGCAGCAATGTCTTCCAGA...ATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CCA 90 bp | CAGGCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTTTCTGGGTTAGATTaGCATCCTGCCCTGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QAHPGELHLLCQPHLGICFSGLD*HPALAS Trigger: TGAAGCCAGGGCAGGATGCCAATCTAACCCAGAAAA...ACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CCA 90 bp | GTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGAGGTCAGGTCAGTGAGGAGGGCTaGGTAGGACTCATCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: VNRAQLLTAPMNPSPRGQVSEEG*VGLITQ Trigger: CTGTGTGATGAGTCCTACCCAGCCCTCCTCACTGAC...CTGACCTCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CCA 90 bp | CTAAAGGTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGAAGCGACGGCAGCTGCTaGTACCCAGCCATCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKVNRAQLLTAPMNPSPRSDGSC*YPAIRG Trigger: TCCTCTGATGGCTGGGTACCAGCAGCTGCCGTCGCT...TCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTACCTTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR TCA 90 bp | GCACTAAGTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTGAGATTTCACTCTTCTaGTCTCCGTGTAGTAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALSTQGTYRVGHLQAHPGEISLF*SPCSNR Trigger: CCTATTACTACACGGAGATCAGAAGAGTGAAATCTC...ACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTACTTAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR TCA 90 bp | ACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTGCTTTGGCCGCCTTTTaGAAGACCTTGCAGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQVSCISSVSHTWVSVSIALAAF*KTLQPA Trigger: TGCAGGCTGCAAGGTCTTTCAAAAGGCGGCCAAAGC...AATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR TCA 90 bp | GCACTAAGTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTGAAATCTCCACATCTTaGACCAAGTCGGTCTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: ALSTQGTYRVGHLQAHPGEISTS*TKSVLF Trigger: GAATAAGACCGACTTGGTTCAAGATGTGGAGATTTC...ACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTACTTAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR GCA 90 bp | CAGGCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTCGTGGAACTTGGCTTTaGATTGTACAAATGGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: QAHPGELHLLCQPHLGICRGTWL*IVQMAR Trigger: TCGTGCCATTTGTACAATGCAAAGCCAAGTTCCACG...ACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR GCA 90 bp | CACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATCTCATCACACAGCTCTaGCCCGTGAAGTGTCACATG | + |
|
Preference number: 4 (lower is better) Translates to: HPGELHLLCQPHLGICFYLITQL*PVKCHM Trigger: CATGTGACACTTCACGGGGCAGAGCTGTGTGATGAG...ATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR GCA 90 bp | GTCAGCTCATGGAAGCAACTGCTGAGGGCACTGCTGCGCCTTTCCCACTTGCCTGCAAAAAGACCACATTaGCTTTTCAACCACCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSSWKQLLRALLRLSHLPAKRPH*LFNHHS Trigger: ACTATGGTGGTTGAAAAGGCAATGTGGTCTTTTTGC...AGGCAAGTGGGAAAGGCGCAGCAGTGCCCTCAGCAGTTGCTTCCATGAGCTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
||
| 3UTR CAA 72 bp | GATCTAAGGGGAGGCAGCAGTGAGCGTGAGCTTTTGTaGTTGCACATCTGTCTCTGCAAAGTGCTTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DLRGGSSERELL*LHICLCKVLWS Trigger: GCTCCAAAGCACTTTGCAGAGACAGATGTGCAACAACAAAAGCTCACGCTCACTGCTGCCTCCCCTTAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
||
| 3UTR CAA 72 bp | CTGGATCTAAGGGGAGGCAGCAGTGAGCGTGAGCTTTaGTTGTTGCACATCTGTCTCTGCAAAGTGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDLRGGSSEREL*LLHICLCKVLW Trigger: CCAAAGCACTTTGCAGAGACAGATGTGCAACAACAAAAGCTCACGCTCACTGCTGCCTCCCCTTAGATCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
||
| CDS-3UTR TCA 90 bp | ATGCTGGACATCAAGACACATTGCACTAACAGCAACGATGACCTCACCCCTTTCCACCTGGGAGCACCTTaGAAGAAATTGGTACCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: MLDIKTHCTNSNDDLTPFHLGAP*KKLVPG Trigger: ACCGGGTACCAATTTCTTTCAAGGTGCTCCCAGGTG...GAAAGGGGTGAGGTCATCGTTGCTGTTAGTGCAATGTGTCTTGATGTCCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR TCA 90 bp | CACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATGGCACTTGTACTTCTTaGACTGGGCAACAGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: HPGELHLLCQPHLGICFYGTCTS*TGQQHC Trigger: GCAATGCTGTTGCCCAGTTCAAGAAGTACAAGTGCC...ATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR TCA 90 bp | CAGGCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTAAGCACATCTTTCCCTaGGTCAGATTTTCTAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: QAHPGELHLLCQPHLGICKHIFP*VRFSKT Trigger: GGTCTTAGAAAATCTGACTCAGGGAAAGATGTGCTT...ACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR TCA 90 bp | ATGCTGGACATCAAGACACATTGCACTAACAGCAACGATGACCTCACCCCTTTCTGCTTGCCTGGATTATaGCGCTGTCCCAGTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: MLDIKTHCTNSNDDLTPFCLPGL*RCPSGS Trigger: AGATCCACTGGGACAGCGTCATAATCCAGGCAAGCA...GAAAGGGGTGAGGTCATCGTTGCTGTTAGTGCAATGTGTCTTGATGTCCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR TCA 90 bp | CTCCTGAACAACCACCCAGGTGTGTTTGTAAGCAGGCCAGATGTGTTGCTGATGTTGGGACTCTGGAAATaGTCATTGTGCTTGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLNNHPGVFVSRPDVLLMLGLWK*SLCLPG Trigger: TCCAGGCAAGCACAATGATCATTTCCAGAGTCCCAA...CATCAGCAACACATCTGGCCTGCTTACAAACACACCTGGGTGGTTGTTCAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCAGTCAGCTCATGGAAGCAACTGCTGAGGGCACTGCTGCGCCTTTCCCACGGCAAATTTCAACAGTaGAAAAAGACCACATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSVSSWKQLLRALLRLSHGKFQQ*KKTTLP Trigger: AGGCAATGTGGTCTTTTTGCACTGTTGAAATTTGCC...GTGGGAAAGGCGCAGCAGTGCCCTCAGCAGTTGCTTCCATGAGCTGACTGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
||
| CDS-3UTR CCA 90 bp | GTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGAGGTCAGCACCTTGAAAGAAATTaGTACCCGGTCAGCTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VNRAQLLTAPMNPSPRGQHLERN*YPVSSP Trigger: CGGAGAGCTGACCGGGTACCAATTTCTTTCAAGGTG...CTGACCTCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CCA 90 bp | GCACTAAGTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTATATTCATGGTCACCTaGGAGCACCTTGAAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALSTQGTYRVGHLQAHPGIFMVT*EHLERN Trigger: ATTTCTTTCAAGGTGCTCCCAGGTGACCATGAATAT...ACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTACTTAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR CCA 90 bp | TTCATCATGGTCAAAGCTACAGCCACAGCAGACCTCCCAGGTAGTCTCTTGACTCTAAGGGATCAGGGTTaGGGTACATCACAGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FIMVKATATADLPGSLLTLRDQG*GTSQQH Trigger: ATGCTGCTGTGATGTACCCCAACCCTGATCCCTTAG...AGTCAAGAGACTACCTGGGAGGTCTGCTGTGGCTGTAGCTTTGACCATGATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR CCA 90 bp | CTCCTGAACAACCACCCAGGTGTGTTTGTAAGCAGGCCAGATGTGTTGCTGATGATCATTGTGCTTGCCTaGATTATGACGCTGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLNNHPGVFVSRPDVLLMIIVLA*IMTLSQ Trigger: CTGGGACAGCGTCATAATCCAGGCAAGCACAATGAT...CATCAGCAACACATCTGGCCTGCTTACAAACACACCTGGGTGGTTGTTCAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
||
| CDS-3UTR TCA 90 bp | ATGCTGGACATCAAGACACATTGCACTAACAGCAACGATGACCTCACCCCTTTCCTTCTCTCCTTCAGCTaGATGGCAAGAATCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MLDIKTHCTNSNDDLTPFLLSFS*MARIPA Trigger: AGCAGGGATTCTTGCCATTCAGCTGAAGGAGAGAAG...GAAAGGGGTGAGGTCATCGTTGCTGTTAGTGCAATGTGTCTTGATGTCCAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTTTTTCAGCAATCACGTaGGGCAGTGTGATGACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TQVSCISSVSHTWVSVSIFSAIT*GSVMTV Trigger: CACCGTCATCACACTGCCTCACGTGATTGCTGAAAA...AATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR GCA 90 bp | TTCATCATGGTCAAAGCTACAGCCACAGCAGACCTCCCAGGTAGTCTCTTGACTGCATTTCCTGTTTGGTaGCAGGGAGAATACGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: FIMVKATATADLPGSLLTAFPVW*QGEYAI Trigger: GATTGCGTATTCTCCCTGGCACCAAACAGGAAATGC...AGTCAAGAGACTACCTGGGAGGTCTGCTGTGGCTGTAGCTTTGACCATGATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTGATGCTGGACATCAAGACGGTCAGCTCTCCGATTaGCACAGAAAGCATCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSVSHTWVSVSIDAGHQDGQLSD*HRKHPR Trigger: TCTGGGATGCTTTCTGTGCCAATCGGAGAGCTGACC...GTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGCTGACAGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGATCCTGTACGCCTATCTaGAAGACATTGCTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKVNRAQLLTAPMNPSPRSCTPI*KTLLPA Trigger: GGCTGGCAGCAATGTCTTCCAGATAGGCGTACAGGA...TCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTACCTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR TCA 90 bp | TTCATCATGGTCAAAGCTACAGCCACAGCAGACCTCCCAGGTAGTCTCTTGACTACAGATCCACAGAGGTaGTCTCGATTTTCTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIMVKATATADLPGSLLTTDPQR*SRFSFP Trigger: TGGGAAAGAAAATCGAGATCACCTCTGTGGATCTGT...AGTCAAGAGACTACCTGGGAGGTCTGCTGTGGCTGTAGCTTTGACCATGATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTCGTGGGACTGAACAGTaGCAACCAAACAGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: TQVSCISSVSHTWVSVSIRGTEQ*QPNSTS Trigger: AGATGTACTGTTTGGTTGTCACTGTTCAGTCCCACG...AATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR TCA 90 bp | GCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTTGTGGAAACAAATCTaGCTGCGACATCAAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AHPGELHLLCQPHLGICFLWKQI*LRHQME Trigger: TTCCATTTGATGTCGCAGTCAGATTTGTTTCCACAA...GAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR TCA 90 bp | CTAAAGGTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGAGATCTGTTTGAGGCCTaGGAACATGAAGGCGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LKVNRAQLLTAPMNPSPRDLFEA*EHEGVT Trigger: AGTGACGCCTTCATGTTCTCAGGCCTCAAACAGATC...TCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTACCTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR GCA 90 bp | AGAGAAGATGATTTCCTCAATATTTCAACCATGAGTTCCTCTGAGCAGCTGGTAAAAGACCTTGCAGCCTaGAGGGCTTCCTGGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: REDDFLNISTMSSSEQLVKDLAA*RASWED Trigger: GTCCTCCCAGGAAGCCCTGCAGGCTGCAAGGTCTTT...TACCAGCTGCTCAGAGGAACTCATGGTTGAAATATTGAGGAAATCATCTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR GCA 90 bp | AAGAGAGGGACAGTTCAAAACGATGACTGCTTTCTTCTCAGTCAGCTCATGGAACCTTTTGAAAGACCTTaGAGCCTGCAGGGCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KRGTVQNDDCFLLSQLMEPFERP*SLQGFL Trigger: CAGGAAGCCCTGCAGGCTGCAAGGTCTTTCAAAAGG...TTCCATGAGCTGACTGAGAAGAAAGCAGTCATCGTTTTGAACTGTCCCTCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| CDS-3UTR CCA 90 bp | GCCACACTTGGGTATCTGTTTCTATTGATGCTGGACATCAAGACACATTGCACTATCACAGCAGCATCGTaGTTACACAGGGCTTTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: ATLGYLFLLMLDIKTHCTITAAS*LHRAFA Trigger: CGCGAAAGCCCTGTGTAACCACGATGCTGCTGTGAT...AGTGCAATGTGTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CCA 90 bp | GTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGAGGTCAGGTGGCTTTTCATCCGTaGGCACTTGTACTTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VNRAQLLTAPMNPSPRGQVAFHP*ALVLLE Trigger: TTCAAGAAGTACAAGTGCCCACGGATGAAAAGCCAC...CTGACCTCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CCA 90 bp | CTCCTGAACAACCACCCAGGTGTGTTTGTAAGCAGGCCAGATGTGTTGCTGATGGTGGACAGAGATGTTTaGGACTCTGGAAATGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLNNHPGVFVSRPDVLLMVDRDV*DSGNDH Trigger: ATGATCATTTCCAGAGTCCCAAACATCTCTGTCCAC...CATCAGCAACACATCTGGCCTGCTTACAAACACACCTGGGTGGTTGTTCAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGGGACAGTTCAAAACGATGACTGCTTTCTTCTCAGTCAGCTCATGGAACTTCACATCCCTGATTaGGGACTTCTCGTGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: KRGTVQNDDCFLLSQLMELHIPD*GLLVGL Trigger: CAGTCCCACGAGAAGTCCCCAATCAGGGATGTGAAG...TTCCATGAGCTGACTGAGAAGAAAGCAGTCATCGTTTTGAACTGTCCCTCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| CDS-3UTR TCA 90 bp | GCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTCATTAAAACATTCATaGGGTTCTTCTCTATCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: AHPGELHLLCQPHLGICFSLKHS*GSSLSE Trigger: CTCGGATAGAGAAGAACCTCATGAATGTTTTAATGA...GAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR TCA 90 bp | AGTGAAACTAGAGAAGATGATTTCCTCAATATTTCAACCATGAGTTCCTCTGAGCGGGCAACGACTCTCTaGCACGTCCAAACGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SETREDDFLNISTMSSSERATTL*HVQTRA Trigger: TGCCCTCGTTTGGACGTGTCAGAGAGTCGTTGCCCG...CTCAGAGGAACTCATGGTTGAAATATTGAGGAAATCATCTTCTCTAGTTTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR GCA 90 bp | CTAAAGGTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGACTCCCTTGCAAACTTTaGCTGACAATCTCCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKVNRAQLLTAPMNPSPRLPCKL*LTISTL Trigger: CAGAGTGGAGATTGTCAGGCAAAGTTTGCAAGGGAG...TCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTACCTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR GCA 90 bp | GTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGAGGTCAGTTGAATCAGGACGACTaGAACTTTTGTGTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VNRAQLLTAPMNPSPRGQLNQDD*NFCVSP Trigger: GGGAGAAACACAAAAGTTGCAGTCGTCCTGATTCAA...CTGACCTCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CCA 90 bp | ACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTAAACCTAATGGGGTGTaGACAGTCAGCCTTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TQVSCISSVSHTWVSVSIKPNGV*TVSLQK Trigger: TTTCTGAAGGCTGACTGTCCACACCCCATTAGGTTT...AATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR TCA 90 bp | AGTGAAACTAGAGAAGATGATTTCCTCAATATTTCAACCATGAGTTCCTCTGAGCACTGGACACAATTGTaGGGGCCCAAGGAGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SETREDDFLNISTMSSSEHWTQL*GPKERH Trigger: GTGCCTCTCCTTGGGCCCTCACAATTGTGTCCAGTG...CTCAGAGGAACTCATGGTTGAAATATTGAGGAAATCATCTTCTCTAGTTTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CCA 90 bp | TCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTGATGCTGGACATCAAGACCATTTTGGATATTCATaGTCACCTGGGAGCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSVSHTWVSVSIDAGHQDHFGYS*SPGSTL Trigger: CAAGGTGCTCCCAGGTGACCATGAATATCCAAAATG...GTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGCTGACAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CCA 90 bp | TCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTGATGCTGGACATCAAGACTCTCCTTCAGCTGAATaGCAAGAATCCCTGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVSHTWVSVSIDAGHQDSPSAE*QESLLS Trigger: AGAAAGCAGGGATTCTTGCCATTCAGCTGAAGGAGA...GTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGCTGACAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CCA 90 bp | ACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTGTGGACAGAGATGTTTaGGACTCTGGAAATGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQVSCISSVSHTWVSVSIVDRDV*DSGNDH Trigger: ATGATCATTTCCAGAGTCCCAAACATCTCTGTCCAC...AATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CCA 90 bp | GCCACACTTGGGTATCTGTTTCTATTGATGCTGGACATCAAGACACATTGCACTAAACGTCTGAGCAGCTaGTTGGTGAAGTTGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ATLGYLFLLMLDIKTHCTKRLSS*LVKLGN Trigger: GTTTCCCAACTTCACCAACCAGCTGCTCAGACGTTT...AGTGCAATGTGTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| 3UTR CAA 72 bp | TCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATaGATGCTGGACATCAAGACACATTGCACTAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLSATLGYLFL*MLDIKTHCTNS Trigger: GCTGTTAGTGCAATGTGTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR TCA 90 bp | GTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGAGGTCAGGTACGACGTTCTCTTTaGTCTACATTTTGGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: VNRAQLLTAPMNPSPRGQVRRSL*STFWIF Trigger: GAATATCCAAAATGTAGATCAAAGAGAACGTCGTAC...CTGACCTCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR TCA 90 bp | CTGTTGTCCAGCATAAGAGAGGGACAGTTCAAAACGATGACTGCTTTCTTCTCAACAGATCCACAGAGGTaGTCTCGATTTTCTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSSIREGQFKTMTAFFSTDPQR*SRFSFP Trigger: TGGGAAAGAAAATCGAGATCACCTCTGTGGATCTGT...TGAGAAGAAAGCAGTCATCGTTTTGAACTGTCCCTCTCTTATGCTGGACAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| CDS-3UTR GCA 90 bp | TCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTGATGCTGGACATCAAGACACTGGGCAACAGCATTaGTCAGAAGAGCGATTATTA | + |
|
Preference number: 4 (lower is better) Translates to: SSVSHTWVSVSIDAGHQDTGQQH*SEERLL Trigger: TAATAATCGCTCTTCTGAGCAATGCTGTTGCCCAGT...GTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGCTGACAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR GCA 90 bp | AGAGAAGATGATTTCCTCAATATTTCAACCATGAGTTCCTCTGAGCAGCTGGTACAGGAAGGGGATGTCTaGATAGACTCTTTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: REDDFLNISTMSSSEQLVQEGDV*IDSFQV Trigger: CACCTGGAAAGAGTCTATGCAGACATCCCCTTCCTG...TACCAGCTGCTCAGAGGAACTCATGGTTGAAATATTGAGGAAATCATCTTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CCA 90 bp | GCCACACTTGGGTATCTGTTTCTATTGATGCTGGACATCAAGACACATTGCACTATCCACGTGAAAACTTaGAGCGTGGAACTTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ATLGYLFLLMLDIKTHCTIHVKT*SVELGF Trigger: AAAGCCAAGTTCCACGCTCCAAGTTTTCACGTGGAT...AGTGCAATGTGTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR GCA 90 bp | GTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGAGGTCAGGTAGTTTATAAATCCTaGCATCGTCTTAATTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VNRAQLLTAPMNPSPRGQVVYKS*HRLNFQ Trigger: CTGGAAATTAAGACGATGGCAGGATTTATAAACTAC...CTGACCTCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTGATGCTGGACATCAAGACACAATTTCCTTGTTTTaGCGGGAACTAAGCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVSHTWVSVSIDAGHQDTISLF*RELSTS Trigger: AGATGTGCTTAGTTCCCGGCAAAACAAGGAAATTGT...GTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGCTGACAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGATGATTTCCTCAATATTTCAACCATGAGTTCCTCTGAGCAGCTGGTAATCATTGTGCTTGCCTaGATTATGACGCTGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: REDDFLNISTMSSSEQLVIIVLA*IMTLSQ Trigger: CTGGGACAGCGTCATAATCCAGGCAAGCACAATGAT...TACCAGCTGCTCAGAGGAACTCATGGTTGAAATATTGAGGAAATCATCTTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR TCA 90 bp | CTAAAGGTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGACTTCAACAGTTGTATTaGTCAGGTAAGAAACGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LKVNRAQLLTAPMNPSPRLQQLY*SGKKRT Trigger: TGTACGTTTCTTACCTGATCAATACAACTGTTGAAG...TCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTACCTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR CCA 90 bp | GCCACACTTGGGTATCTGTTTCTATTGATGCTGGACATCAAGACACATTGCACTGACTGCGACATCAAATaGAAAGACAGTTTCTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: ATLGYLFLLMLDIKTHCTDCDIK*KDSFYC Trigger: ACAATAGAAACTGTCTTTCCATTTGATGTCGCAGTC...AGTGCAATGTGTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR GCA 90 bp | AGAGAAGATGATTTCCTCAATATTTCAACCATGAGTTCCTCTGAGCAGCTGGTAGGAAACAAATCTGACTaGGACATCAAATGGAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: REDDFLNISTMSSSEQLVGNKSD*DIKWKD Trigger: GTCTTTCCATTTGATGTCGCAGTCAGATTTGTTTCC...TACCAGCTGCTCAGAGGAACTCATGGTTGAAATATTGAGGAAATCATCTTCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR CCA 90 bp | GCCACACTTGGGTATCTGTTTCTATTGATGCTGGACATCAAGACACATTGCACTAGAATATTAGTTTCATaGGCCCTCAATTCATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: ATLGYLFLLMLDIKTHCTRILVS*ALNSCT Trigger: TGTACATGAATTGAGGGCCCATGAAACTAATATTCT...AGTGCAATGTGTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR CCA 90 bp | AGTGAAACTAGAGAAGATGATTTCCTCAATATTTCAACCATGAGTTCCTCTGAGTTGGAGCGTGGAACTTaGCTTTGCATTGTACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: SETREDDFLNISTMSSSELERGT*LCIVQM Trigger: CATTTGTACAATGCAAAGCCAAGTTCCACGCTCCAA...CTCAGAGGAACTCATGGTTGAAATATTGAGGAAATCATCTTCTCTAGTTTCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS GCA 90 bp | TCGTCCTCAGCAAGCTTTGGCCGCCTTTTGAAAGACCTTGCAGCCTaGAGGGCTTCCTGGGAGGACGCAGCATCTCCTCCTCCTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSASFGRLLKDLAA*RASWEDAASPPPPC Trigger: GCAGGGAGGAGGAGGAGATGCTGCGTCCTCCCAGGAAGCCCTGCAGGCTGCAAGGTCTTTCAAAAGGCGGCCAAAGCTTGCTGAGGACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039061.15 ENSMUST00000120987.2 |
||
| CDS GCA 90 bp | GTGGATCTCGTCCTCAGCAAGCTTTGGCCGCCTTTTGAAAGACCTTaGAGCCTGCAGGGCTTCCTGGGAGGACGCAGCATCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VDLVLSKLWPPFERP*SLQGFLGGRSISSS Trigger: GGAGGAGGAGATGCTGCGTCCTCCCAGGAAGCCCTGCAGGCTGCAAGGTCTTTCAAAAGGCGGCCAAAGCTTGCTGAGGACGAGATCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039061.15 ENSMUST00000120987.2 |
||
| CDS TCA 90 bp | TTTCTAGCTGCTCCCCTGGGTGTAGGTCTCCCACAGGAATGTCAGTaGGGAGGGCTGGGTAGGACTCATCACACAGCTCTGCCCCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: FLAAPLGVGLPQECQ*GGLGRTHHTALPRE Trigger: TTCACGGGGCAGAGCTGTGTGATGAGTCCTACCCAGCCCTCCTCACTGACATTCCTGTGGGAGACCTACACCCAGGGGAGCAGCTAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS TCA 90 bp | GGCAGGTCTGCGTTCACGTGGAGAGGGATGTTTTCAGCAATCACGTaGGGCAGTGTGATGACGGTGCTGACGGCGGGGATGCTTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GRSAFTWRGMFSAIT*GSVMTVLTAGMLST Trigger: TGTGGAAAGCATCCCCGCCGTCAGCACCGTCATCACACTGCCTCACGTGATTGCTGAAAACATCCCTCTCCACGTGAACGCAGACCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS GCA 90 bp | AAGACATTGCTGCCAGCCAGAGAGACCCGGTCCGCCCACAGCTTCTaGGCAGTCTTCACCGCTAAGACATCACAGTCAGGTTCAGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KTLLPARETRSAHSF*AVFTAKTSQSGSGS Trigger: TGACCCTGAACCTGACTGTGATGTCTTAGCGGTGAAGACTGCGCAGAAGCTGTGGGCGGACCGGGTCTCTCTGGCTGGCAGCAATGTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS GCA 90 bp | GTACAAATGGCACGAAGTCCTGTACGCCTATCTGGAAGACATTGCTaGCAGCCAGAGAGACCCGGTCCGCCCACAGCTTCTGCGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VQMARSPVRLSGRHC*QPERPGPPTASAQS Trigger: AGACTGCGCAGAAGCTGTGGGCGGACCGGGTCTCTCTGGCTGGCAGCAATGTCTTCCAGATAGGCGTACAGGACTTCGTGCCATTTGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS GCA 90 bp | ATTGTACAAATGGCACGAAGTCCTGTACGCCTATCTGGAAGACATTaGTGCCAGCCAGAGAGACCCGGTCCGCCCACAGCTTCTGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IVQMARSPVRLSGRH*CQPERPGPPTASAQ Trigger: CTGCGCAGAAGCTGTGGGCGGACCGGGTCTCTCTGGCTGGCAGCAATGTCTTCCAGATAGGCGTACAGGACTTCGTGCCATTTGTACAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CAA 90 bp | GTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTGAGTTGCTCTAAGGGATCAGGGTaGGGGTACATCACAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VHRGLTGWVTCRHTQVSCSKGSG*GYITAA Trigger: TGCTGCTGTGATGTACCCCAACCCTGATCCCTTAGA...GCAACTCACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CCA 90 bp | TTGGCTTTGCATTGTACAAATGGCACGAAGTCCTGTACGCCTATCTaGAAGACATTGCTGCCAGCCAGAGAGACCCGGTCCGCCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LALHCTNGTKSCTPI*KTLLPARETRSAHS Trigger: GCTGTGGGCGGACCGGGTCTCTCTGGCTGGCAGCAATGTCTTCCAGATAGGCGTACAGGACTTCGTGCCATTTGTACAATGCAAAGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CAA 90 bp | GCACTAAGTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTTCACCTGGGAGCACCTaGAAAGAAATTGGTACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ALSTQGTYRVGHLQAHPGSPGST*KEIGTR Trigger: CCGGGTACCAATTTCTTTCAAGGTGCTCCCAGGTGA...ACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTACTTAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS GCA 90 bp | TTCCACAACCGAGGCCCTCTTCCAGGAGATAATGTAATGTCCCGTTaGCACTCCACCTTCAATGTTCCCAGCAGACGGGCAGCGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: FHNRGPLPGDNVMSR*HSTFNVPSRRAAKT Trigger: TGTCTTCGCTGCCCGTCTGCTGGGAACATTGAAGGTGGAGTGGCAACGGGACATTACATTATCTCCTGGAAGAGGGCCTCGGTTGTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CCA 90 bp | ATCCTGCCCTGGCTTCAGGCCCGCAGTGAGCTTCACATCCCTGATTaGGGACTTCTCGTGGGACTGAACAGTGACAACCAAACAGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: ILPWLQARSELHIPD*GLLVGLNSDNQTVH Trigger: ATGTACTGTTTGGTTGTCACTGTTCAGTCCCACGAGAAGTCCCCAATCAGGGATGTGAAGCTCACTGCGGGCCTGAAGCCAGGGCAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CAA 90 bp | GTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTGAGTTGCGCTCATCTTTCAGAGTaGAAGCTCGTCCAAGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VHRGLTGWVTCRHTQVSCAHLSE*KLVQGV Trigger: AACTCCTTGGACGAGCTTCAACTCTGAAAGATGAGC...GCAACTCACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CAA 90 bp | GTACACAGGGGACTTACAGGGTGGGTCACTTGCAGGCACACCCAGGTGAGTTGCGATCCATTGCAGTCATaGATGGAGCAAGCTGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VHRGLTGWVTCRHTQVSCDPLQS*MEQAVA Trigger: AGCTACAGCTTGCTCCATCAATGACTGCAATGGATC...GCAACTCACCTGGGTGTGCCTGCAAGTGACCCACCCTGTAAGTCCCCTGTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CCA 90 bp | ATGCTCACCTGGCTTCAGGCCCGCAGTGAGCTTCACATCCCTGATTaGGGACTTCTCGTGGGACTGAACAGTGACAACCAAACAGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: MLTWLQARSELHIPD*GLLVGLNSDNQTVH Trigger: ATGTACTGTTTGGTTGTCACTGTTCAGTCCCACGAGAAGTCCCCAATCAGGGATGTGAAGCTCACTGCGGGCCTGAAGCCAGGTGAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
||
| CDS-3UTR CAA 90 bp | CACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATCGGTCAGCTCTCCGATaGGCACAGAAAGCATCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HPGELHLLCQPHLGICFYRSALR*AQKASQ Trigger: CTGGGATGCTTTCTGTGCCAATCGGAGAGCTGACCG...ATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CAA 90 bp | CAGGCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTGGGCACTTGTACTTCTaGAACTGGGCAACAGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: QAHPGELHLLCQPHLGICGHLYF*NWATAL Trigger: CAATGCTGTTGCCCAGTTCAAGAAGTACAAGTGCCC...ACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CAA 90 bp | CAGGCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTCGCAATCGGATCTGTTaGAGGCCTGAGAACATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QAHPGELHLLCQPHLGICRNRIC*RPENMK Trigger: CTTCATGTTCTCAGGCCTCAAACAGATCCGATTGCG...ACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS TCA 90 bp | GAGAACATGAAGGCGTCACTGGGCTCCACAGAAATCTCCACATCTTaGACCAAGTCGGTCTTATTCTGCAGGTGGTACCTGACGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ENMKASLGSTEISTS*TKSVLFCRWYLTGN Trigger: GTTGCCCGTCAGGTACCACCTGCAGAATAAGACCGACTTGGTTCAAGATGTGGAGATTTCTGTGGAGCCCAGTGACGCCTTCATGTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS GCA 90 bp | TGGTACCCGGTCAGCTCTCCGATTGGCACAGAAAGCATCCCAGACTaGTCGATGGACAGCATTATAGACAACATCAAGGCCAGTGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: WYPVSSPIGTESIPD*SMDSIIDNIKASEC Trigger: ACACTCACTGGCCTTGATGTTGTCTATAATGCTGTCCATCGAGCAGTCTGGGATGCTTTCTGTGCCAATCGGAGAGCTGACCGGGTACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CAA 90 bp | CAGGCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTGGACGACTGCAACTTTaGTGTTTCTCCCTTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QAHPGELHLLCQPHLGICGRLQL*CFSLAN Trigger: GTTTGCAAGGGAGAAACACAAAAGTTGCAGTCGTCC...ACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CAA 90 bp | GCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTTCATCCGTGGGCACTaGTACTTCTTGAACTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AHPGELHLLCQPHLGICFFIRGH*YFLNWA Trigger: TGCCCAGTTCAAGAAGTACAAGTGCCCACGGATGAA...GAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CAA 90 bp | GCACACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCAAGCTGACGCAGAGCTaGGAAAACCTAATGGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: AHPGELHLLCQPHLGICFKLTQS*ENLMGC Trigger: ACACCCCATTAGGTTTTCCAAGCTCTGCGTCAGCTT...GAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS TCA 90 bp | CCCGCAGTGAGCTTCACATCCCTGATTGGGGACTTCTCGTGGGACTaGACAGTGACAACCAAACAGTACATCTCATTCATTAGAGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PAVSFTSLIGDFSWD*TVTTKQYISFIRAG Trigger: CCCTGCTCTAATGAATGAGATGTACTGTTTGGTTGTCACTGTTCAGTCCCACGAGAAGTCCCCAATCAGGGATGTGAAGCTCACTGCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039061.15 ENSMUST00000120987.2 |
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| CDS GCA 90 bp | ACACAGGGCTTTCGCGTGCTGTTTTCGCTCCTGGGCATAGTAAGCTaGCTGCTGATAGTAGAAACCAGGGTTCTGCGTTTGAATAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TQGFRVLFSLLGIVS*LLIVETRVLRLNSC Trigger: ACAGCTATTCAAACGCAGAACCCTGGTTTCTACTATCAGCAGGCAGCTTACTATGCCCAGGAGCGAAAACAGCACGCGAAAGCCCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CCA 90 bp | GTCAACCCCAACTTAATGGCTTCATCAAATAAGTCTCCAAAGGCCTaGAATTGTTTTGCCATCCACGCGGCGTGCTCAAAGGCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VNPNLMASSNKSPKA*NCFAIHAACSKASS Trigger: GGAGCTGGCCTTTGAGCACGCCGCGTGGATGGCAAAACAATTCCAGGCCTTTGGAGACTTATTTGATGAAGCCATTAAGTTGGGGTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS GCA 90 bp | AATAAGTCTCCAAAGGCCTGGAATTGTTTTGCCATCCACGCGGCGTaGTCAAAGGCCAGCTCCGCACTCCCAATCTTTTTCTTACACAAG | + |
|
Preference number: 5 (lower is better) Translates to: NKSPKAWNCFAIHAA*SKASSALPIFFLHK Trigger: CTTGTGTAAGAAAAAGATTGGGAGTGCGGAGCTGGCCTTTGAGCACGCCGCGTGGATGGCAAAACAATTCCAGGCCTTTGGAGACTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CCA 90 bp | GTAGTACTCCTCTCCCATCTGAACCATGAGGTGGCTTTTCATCCGTaGGCACTTGTACTTCTTGAACTGGGCAACAGCATTGCTCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VVLLSHLNHEVAFHP*ALVLLELGNSIAQK Trigger: CTTCTGAGCAATGCTGTTGCCCAGTTCAAGAAGTACAAGTGCCCACGGATGAAAAGCCACCTCATGGTTCAGATGGGAGAGGAGTACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CCA 90 bp | TGCGGCTTCACAAAAATGCTGGTCGGGATGAAACGTCTGAGCAGCTaGTTGGTGAAGTTGGGAAACCTAAGCAAGTTGATGTTGAGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: CGFTKMLVGMKRLSS*LVKLGNLSKLMLSD Trigger: GTCGCTCAACATCAACTTGCTTAGGTTTCCCAACTTCACCAACCAGCTGCTCAGACGTTTCATCCCGACCAGCATTTTTGTGAAGCCGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CAA 90 bp | CTAAAGGTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGATCCAAAGGCCTGGAATaGTTTTGCCATCCACGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LKVNRAQLLTAPMNPSPRSKGLE*FCHPRG Trigger: GCCGCGTGGATGGCAAAACAATTCCAGGCCTTTGGA...TCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTACCTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CAA 90 bp | CTAAAGGTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGACCTATCTGGAAGACATaGCTGCCAGCCAGAGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: LKVNRAQLLTAPMNPSPRPIWKT*LPARET Trigger: GGTCTCTCTGGCTGGCAGCAATGTCTTCCAGATAGG...TCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTACCTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CAA 90 bp | GTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGAGGTCAGGCGTGGAACTTGGCTTaGCATTGTACAAATGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: VNRAQLLTAPMNPSPRGQAWNLA*HCTNGT Trigger: CGTGCCATTTGTACAATGCAAAGCCAAGTTCCACGC...CTGACCTCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CCA 90 bp | ACATTTTGGATATTCATGGTCACCTGGGAGCACCTTGAAAGAAATTaGTACCCGGTCAGCTCTCCGATTGGCACAGAAAGCATCCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TFWIFMVTWEHLERN*YPVSSPIGTESIPD Trigger: GTCTGGGATGCTTTCTGTGCCAATCGGAGAGCTGACCGGGTACCAATTTCTTTCAAGGTGCTCCCAGGTGACCATGAATATCCAAAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CCA 90 bp | AAACAGTACATCTCATTCATTAGAGCAGGGGGCTCGTGTCGCAGGTaGACAGAGATGTTTGGGACTCTGGAAATGATCATTGTGCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KQYISFIRAGGSCRR*TEMFGTLEMIIVLA Trigger: GGCAAGCACAATGATCATTTCCAGAGTCCCAAACATCTCTGTCCACCTGCGACACGAGCCCCCTGCTCTAATGAATGAGATGTACTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039061.15 ENSMUST00000120987.2 |
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| CDS-3UTR CAA 90 bp | ACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTTACAGCATTTCCTGTTaGGTGCCAGGGAGAATACGC | + |
|
Preference number: 5 (lower is better) Translates to: TQVSCISSVSHTWVSVSIYSISC*VPGRIR Trigger: GCGTATTCTCCCTGGCACCAAACAGGAAATGCTGTA...AATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CAA 90 bp | GCCACACTTGGGTATCTGTTTCTATTGATGCTGGACATCAAGACACATTGCACTCTAAGCAAGTTGATGTaGAGCGACGGCAGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ATLGYLFLLMLDIKTHCTLSKLM*SDGSCW Trigger: CCAGCAGCTGCCGTCGCTCAACATCAACTTGCTTAG...AGTGCAATGTGTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CAA 90 bp | CTAAAGGTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGACGTCTGAGCAGCTGGTaGGTGAAGTTGGGAAACCTA | + |
|
Preference number: 5 (lower is better) Translates to: LKVNRAQLLTAPMNPSPRRLSSW*VKLGNL Trigger: TAGGTTTCCCAACTTCACCAACCAGCTGCTCAGACG...TCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTACCTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS TCA 90 bp | AGAGCGATTATTATTTCAGAGTGGACGACACTTCTCTCCTTCAGCTaGATGGCAAGAATCCCTGCTTTCTCTTTCTCAGGGTCCGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RAIIISEWTTLLSFS*MARIPAFSFSGSER Trigger: CCTCTCGGACCCTGAGAAAGAGAAAGCAGGGATTCTTGCCATTCAGCTGAAGGAGAGAAGTGTCGTCCACTCTGAAATAATAATCGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS TCA 90 bp | TTGCAGTCATTGATGGAGCAAGCTGTAGCTCACTGGACACAATTGTaGGGGCCCAAGGAGAGGCACTTAAAACATCTGTCATCAACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LQSLMEQAVAHWTQL*GPKERHLKHLSSTG Trigger: TCCTGTTGATGACAGATGTTTTAAGTGCCTCTCCTTGGGCCCTCACAATTGTGTCCAGTGAGCTACAGCTTGCTCCATCAATGACTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS TCA 90 bp | CTCTCTCCTGTCTGTAAGACAACTTTGTCTATCTGGGACTCCAGATaGTCCATTGCAGTCATTGATGGAGCAAGCTGTAGCTCACTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSPVCKTTLSIWDSR*SIAVIDGASCSSLD Trigger: GTCCAGTGAGCTACAGCTTGCTCCATCAATGACTGCAATGGATCATCTGGAGTCCCAGATAGACAAAGTTGTCTTACAGACAGGAGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS-3UTR CAA 90 bp | CTAAAGGTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGAAGCACAAACAGAGACTaGCCTGAGAGCTCACACACA | + |
|
Preference number: 5 (lower is better) Translates to: LKVNRAQLLTAPMNPSPRSTNRD*PESSHT Trigger: TGTGTGTGAGCTCTCAGGCAAGTCTCTGTTTGTGCT...TCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTACCTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR CAA 90 bp | GTAAATAGAGCACAGCTCTTAACTGCTCCAATGAACCCCTCTCCCAGAGGTCAGAACTGGGCAACAGCATaGCTCAGAAGAGCGATTATT | + |
|
Preference number: 5 (lower is better) Translates to: VNRAQLLTAPMNPSPRGQNWATA*LRRAII Trigger: AATAATCGCTCTTCTGAGCAATGCTGTTGCCCAGTT...CTGACCTCTGGGAGAGGGGTTCATTGGAGCAGTTAAGAGCTGTGCTCTATTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CCA 90 bp | CGATTATTATTTCAGAGTGGACGACACTTCTCTCCTTCAGCTGAATaGCAAGAATCCCTGCTTTCTCTTTCTCAGGGTCCGAGAGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RLLFQSGRHFSPSAE*QESLLSLSQGPRGQ Trigger: TTGACCTCTCGGACCCTGAGAAAGAGAAAGCAGGGATTCTTGCCATTCAGCTGAAGGAGAGAAGTGTCGTCCACTCTGAAATAATAATCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CCA 90 bp | ACCATGAGGTGGCTTTTCATCCGTGGGCACTTGTACTTCTTGAACTaGGCAACAGCATTGCTCAGAAGAGCGATTATTATTTCAGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TMRWLFIRGHLYFLN*ATALLRRAIIISEW Trigger: CCACTCTGAAATAATAATCGCTCTTCTGAGCAATGCTGTTGCCCAGTTCAAGAAGTACAAGTGCCCACGGATGAAAAGCCACCTCATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR CAA 90 bp | TCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTGATGCTGGACATCAAGACTCTCCCTTGCAAACTTaGCCTGACAATCTCCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSVSHTWVSVSIDAGHQDSPLQT*PDNLHS Trigger: AGAGTGGAGATTGTCAGGCAAAGTTTGCAAGGGAGA...GTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGCTGACAGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR CAA 90 bp | AGTGAAACTAGAGAAGATGATTTCCTCAATATTTCAACCATGAGTTCCTCTGAGGAGAGCTCACACACATaGCATAAGGCCGCAGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SETREDDFLNISTMSSSEESSHT*HKAAAR Trigger: GCGGGCTGCGGCCTTATGCAATGTGTGTGAGCTCTC...CTCAGAGGAACTCATGGTTGAAATATTGAGGAAATCATCTTCTCTAGTTTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS TCA 90 bp | TCTTTGATCTACATTTTGGATATTCATGGTCACCTGGGAGCACCTTaGAAGAAATTGGTACCCGGTCAGCTCTCCGATTGGCACAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLIYILDIHGHLGAP*KKLVPGQLSDWHRK Trigger: CTTTCTGTGCCAATCGGAGAGCTGACCGGGTACCAATTTCTTTCAAGGTGCTCCCAGGTGACCATGAATATCCAAAATGTAGATCAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CCA 90 bp | TACCACTCGTACGACGTTCTCTTTGATCTACATTTTGGATATTCATaGTCACCTGGGAGCACCTTGAAAGAAATTGGTACCCGGTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: YHSYDVLFDLHFGYS*SPGSTLKEIGTRSA Trigger: AGCTGACCGGGTACCAATTTCTTTCAAGGTGCTCCCAGGTGACCATGAATATCCAAAATGTAGATCAAAGAGAACGTCGTACGAGTGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR CAA 90 bp | GCCACACTTGGGTATCTGTTTCTATTGATGCTGGACATCAAGACACATTGCACTAGCTGGTTGGTGAAGTaGGGAAACCTAAGCAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ATLGYLFLLMLDIKTHCTSWLVK*GNLSKL Trigger: CAACTTGCTTAGGTTTCCCAACTTCACCAACCAGCT...AGTGCAATGTGTCTTGATGTCCAGCATCAATAGAAACAGATACCCAAGTGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS TCA 90 bp | CAGTCAGCCTTCAGAAAAACATCAAACTCAACAGGAACATCCACGTaGAAACTTGGAGCGTGGAACTTGGCTTTGCATTGTACAAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: QSAFRKTSNSTGTST*KLGAWNLALHCTNG Trigger: GCCATTTGTACAATGCAAAGCCAAGTTCCACGCTCCAAGTTTTCACGTGGATGTTCCTGTTGAGTTTGATGTTTTTCTGAAGGCTGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR CAA 90 bp | ACCCAGGTGAGTTGCATCTCCTCTGTCAGCCACACTTGGGTATCTGTTTCTATTTTTTGTGTTTCTCCCTaGCAAACTTTGCCTGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: TQVSCISSVSHTWVSVSIFCVSP*QTLPDN Trigger: ATTGTCAGGCAAAGTTTGCAAGGGAGAAACACAAAA...AATAGAAACAGATACCCAAGTGTGGCTGACAGAGGAGATGCAACTCACCTGGGT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR CAA 90 bp | ATGCTGGACATCAAGACACATTGCACTAACAGCAACGATGACCTCACCCCTTTCATTCTTCAGGGCGTTTaGTGTATCTTGTTTCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: MLDIKTHCTNSNDDLTPFILQGV*CILFQL Trigger: GAGTTGAAACAAGATACACAAAACGCCCTGAAGAAT...GAAAGGGGTGAGGTCATCGTTGCTGTTAGTGCAATGTGTCTTGATGTCCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS TCA 90 bp | CACAGTCAGGTTCAGGGTCAGGGCTTTCATTCATTAAAACATTCATaGGGTTCTTCTCTATCCGAGACTTCTGCTCATCTTTCAGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HSQVQGQGFHSLKHS*GSSLSETSAHLSEL Trigger: CAACTCTGAAAGATGAGCAGAAGTCTCGGATAGAGAAGAACCTCATGAATGTTTTAATGAATGAAAGCCCTGACCCTGAACCTGACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CCA 90 bp | CTTCAGAAAAACATCAAACTCAACAGGAACATCCACGTGAAAACTTaGAGCGTGGAACTTGGCTTTGCATTGTACAAATGGCACGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LQKNIKLNRNIHVKT*SVELGFALYKWHEV Trigger: GACTTCGTGCCATTTGTACAATGCAAAGCCAAGTTCCACGCTCCAAGTTTTCACGTGGATGTTCCTGTTGAGTTTGATGTTTTTCTGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS-3UTR CAA 90 bp | ATGCTGGACATCAAGACACATTGCACTAACAGCAACGATGACCTCACCCCTTTCTCTTTGATCTACATTTaGGATATTCATGGTCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: MLDIKTHCTNSNDDLTPFSLIYI*DIHGHL Trigger: CAGGTGACCATGAATATCCAAAATGTAGATCAAAGA...GAAAGGGGTGAGGTCATCGTTGCTGTTAGTGCAATGTGTCTTGATGTCCAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS GCA 90 bp | TCATTCATTAAAACATTCATGAGGTTCTTCTCTATCCGAGACTTCTaGTCATCTTTCAGAGTTGAAGCTCGTCCAAGGAGTTCCAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SFIKTFMRFFSIRDF*SSFRVEARPRSSRE Trigger: TTCTCTGGAACTCCTTGGACGAGCTTCAACTCTGAAAGATGAGCAGAAGTCTCGGATAGAGAAGAACCTCATGAATGTTTTAATGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CCA 90 bp | CAGGTGCTCAAACTTTGTGGAAACAAATCTGACTGCGACATCAAATaGAAAGACAGTTTCTATTGTGACAGTATCATCCTTGTGACACTT | + |
|
Preference number: 5 (lower is better) Translates to: QVLKLCGNKSDCDIK*KDSFYCDSIILVTL Trigger: AAGTGTCACAAGGATGATACTGTCACAATAGAAACTGTCTTTCCATTTGATGTCGCAGTCAGATTTGTTTCCACAAAGTTTGAGCACCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS GCA 72 bp | CTGCCAGCCAGAGAGACCCGGTCCGCCCACAGCTTCTaGGCAGTCTTCACCGCTAAGACATCACAGTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LPARETRSAHSF*AVFTAKTSQSG Trigger: ACCTGACTGTGATGTCTTAGCGGTGAAGACTGCGCAGAAGCTGTGGGCGGACCGGGTCTCTCTGGCTGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS TCA 72 bp | GCTCCCCTGGGTGTAGGTCTCCCACAGGAATGTCAGTaGGGAGGGCTGGGTAGGACTCATCACACAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: APLGVGLPQECQ*GGLGRTHHTAL Trigger: CAGAGCTGTGTGATGAGTCCTACCCAGCCCTCCTCACTGACATTCCTGTGGGAGACCTACACCCAGGGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS GCA 72 bp | GCACGAAGTCCTGTACGCCTATCTGGAAGACATTGCTaGCAGCCAGAGAGACCCGGTCCGCCCACAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ARSPVRLSGRHC*QPERPGPPTAS Trigger: AGAAGCTGTGGGCGGACCGGGTCTCTCTGGCTGGCAGCAATGTCTTCCAGATAGGCGTACAGGACTTCGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS GCA 72 bp | GCAAGCTTTGGCCGCCTTTTGAAAGACCTTGCAGCCTaGAGGGCTTCCTGGGAGGACGCAGCATCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ASFGRLLKDLAA*RASWEDAASPP Trigger: AGGAGGAGATGCTGCGTCCTCCCAGGAAGCCCTGCAGGCTGCAAGGTCTTTCAAAAGGCGGCCAAAGCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039061.15 ENSMUST00000120987.2 |
||
| CDS GCA 72 bp | GTCCTCAGCAAGCTTTGGCCGCCTTTTGAAAGACCTTaGAGCCTGCAGGGCTTCCTGGGAGGACGCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: VLSKLWPPFERP*SLQGFLGGRSI Trigger: GATGCTGCGTCCTCCCAGGAAGCCCTGCAGGCTGCAAGGTCTTTCAAAAGGCGGCCAAAGCTTGCTGAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039061.15 ENSMUST00000120987.2 |
||
| CDS CCA 72 bp | GACGCTGTCCCAGTGGATCTCGTCCTCAGCAAGCTTTaGCCGCCTTTTGAAAGACCTTGCAGCCTGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: DAVPVDLVLSKL*PPFERPCSLQG Trigger: GCCCTGCAGGCTGCAAGGTCTTTCAAAAGGCGGCCAAAGCTTGCTGAGGACGAGATCCACTGGGACAGCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039061.15 ENSMUST00000120987.2 |
||
| CDS TCA 72 bp | GGTAGGAACACTTCAGGGCTGTCGTCAGTATCGACGTaGGCAGAGTCCACCACGCTTCGCTCCGGTAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GRNTSGLSSVST*AESTTLRSGSH Trigger: GTGACTACCGGAGCGAAGCGTGGTGGACTCTGCTCACGTCGATACTGACGACAGCCCTGAAGTGTTCCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS TCA 72 bp | TCCTCCTCCCTGCCAGCTCAAAACCACACACCGGCCTaGCTCGCTGCCCAGAAACAGATCCACAGAGGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSLPAQNHTPA*LAAQKQIHRGD Trigger: ATCACCTCTGTGGATCTGTTTCTGGGCAGCGAGTCAGGCCGGTGTGTGGTTTTGAGCTGGCAGGGAGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039061.15 ENSMUST00000120987.2 |
||
| CDS TCA 72 bp | AGTGGATCTCGTCCTCAGCAAGCTTTGGCCGCCTTTTaGAAGACCTTGCAGCCTGCAGGGCTTCCTGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SGSRPQQALAAF*KTLQPAGLPGR Trigger: CCTCCCAGGAAGCCCTGCAGGCTGCAAGGTCTTTCAAAAGGCGGCCAAAGCTTGCTGAGGACGAGATCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039061.15 ENSMUST00000120987.2 |
||
| CDS TCA 72 bp | GCGTTCACGTGGAGAGGGATGTTTTCAGCAATCACGTaGGGCAGTGTGATGACGGTGCTGACGGCGGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: AFTWRGMFSAIT*GSVMTVLTAGM Trigger: CATCCCCGCCGTCAGCACCGTCATCACACTGCCTCACGTGATTGCTGAAAACATCCCTCTCCACGTGAACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CAA 90 bp | GTGTGGGGCAGCACAAACAGAGACTTGCCTGAGAGCTCACACACATaGCATAAGGCCGCAGCCCGCTCCGAAGCAATGACATCTTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: VWGSTNRDLPESSHT*HKAAARSEAMTSSP Trigger: AGGGGAAGATGTCATTGCTTCGGAGCGGGCTGCGGCCTTATGCAATGTGTGTGAGCTCTCAGGCAAGTCTCTGTTTGTGCTGCCCCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CAA 90 bp | CATTGTACAAATGGCACGAAGTCCTGTACGCCTATCTGGAAGACATaGCTGCCAGCCAGAGAGACCCGGTCCGCCCACAGCTTCTGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: HCTNGTKSCTPIWKT*LPARETRSAHSFCA Trigger: TGCGCAGAAGCTGTGGGCGGACCGGGTCTCTCTGGCTGGCAGCAATGTCTTCCAGATAGGCGTACAGGACTTCGTGCCATTTGTACAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS GCA 72 bp | CCAAAGGCCTGGAATTGTTTTGCCATCCACGCGGCGTaGTCAAAGGCCAGCTCCGCACTCCCAATCTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PKAWNCFAIHAA*SKASSALPIFF Trigger: GAAAAAGATTGGGAGTGCGGAGCTGGCCTTTGAGCACGCCGCGTGGATGGCAAAACAATTCCAGGCCTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS GCA 72 bp | CGAGGCCCTCTTCCAGGAGATAATGTAATGTCCCGTTaGCACTCCACCTTCAATGTTCCCAGCAGACGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RGPLPGDNVMSR*HSTFNVPSRRA Trigger: TGCCCGTCTGCTGGGAACATTGAAGGTGGAGTGGCAACGGGACATTACATTATCTCCTGGAAGAGGGCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CCA 72 bp | AAGGGATCAGGGTTGGGGTACATCACAGCAGCATCGTaGTTACACAGGGCTTTCGCGTGCTGTTTTCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KGSGLGYITAAS*LHRAFACCFRS Trigger: GGAGCGAAAACAGCACGCGAAAGCCCTGTGTAACCACGATGCTGCTGTGATGTACCCCAACCCTGATCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CCA 72 bp | TGGCTTCAGGCCCGCAGTGAGCTTCACATCCCTGATTaGGGACTTCTCGTGGGACTGAACAGTGACAACCAA | + |
|
Preference number: 6 (lower is better) Translates to: WLQARSELHIPD*GLLVGLNSDNQ Trigger: TTGGTTGTCACTGTTCAGTCCCACGAGAAGTCCCCAATCAGGGATGTGAAGCTCACTGCGGGCCTGAAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039061.15 ENSMUST00000120987.2 |
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| CDS GCA 72 bp | CAACGACTCTCTGACACGTCCAAACGAGGGCAGGTCTaGGTTCACGTGGAGAGGGATGTTTTCAGCAATCAC | + |
|
Preference number: 6 (lower is better) Translates to: QRLSDTSKRGQV*VHVERDVFSNH Trigger: GTGATTGCTGAAAACATCCCTCTCCACGTGAACGCAGACCTGCCCTCGTTTGGACGTGTCAGAGAGTCGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CCA 72 bp | CATTGTACAAATGGCACGAAGTCCTGTACGCCTATCTaGAAGACATTGCTGCCAGCCAGAGAGACCCGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: HCTNGTKSCTPI*KTLLPARETRS Trigger: GGACCGGGTCTCTCTGGCTGGCAGCAATGTCTTCCAGATAGGCGTACAGGACTTCGTGCCATTTGTACAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CCA 72 bp | AGCAGGGGGCTCGTGTCGCAGGTGGACAGAGATGTTTaGGACTCTGGAAATGATCATTGTGCTTGCCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SRGLVSQVDRDV*DSGNDHCACLD Trigger: ATCCAGGCAAGCACAATGATCATTTCCAGAGTCCCAAACATCTCTGTCCACCTGCGACACGAGCCCCCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039061.15 ENSMUST00000120987.2 |
||
| CDS CAA 72 bp | AGCACAAACAGAGACTTGCCTGAGAGCTCACACACATaGCATAAGGCCGCAGCCCGCTCCGAAGCAATGACA | + |
|
Preference number: 6 (lower is better) Translates to: STNRDLPESSHT*HKAAARSEAMT Trigger: TGTCATTGCTTCGGAGCGGGCTGCGGCCTTATGCAATGTGTGTGAGCTCTCAGGCAAGTCTCTGTTTGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CAA 90 bp | AAACGTCTGAGCAGCTGGTTGGTGAAGTTGGGAAACCTAAGCAAGTaGATGTTGAGCGACGGCAGCTGCTGGTACCCAGCCATCAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: KRLSSWLVKLGNLSK*MLSDGSCWYPAIRG Trigger: TCCTCTGATGGCTGGGTACCAGCAGCTGCCGTCGCTCAACATCAACTTGCTTAGGTTTCCCAACTTCACCAACCAGCTGCTCAGACGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS TCA 72 bp | ACACATTGCATAAGGCCGCAGCCCGCTCCGAAGCAATaGCATCTTCCCCTGGCGGTAAAGGCGTTTTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: THCIRPQPAPKQ*HLPLAVKAFSF Trigger: AAAAGAAAACGCCTTTACCGCCAGGGGAAGATGTCATTGCTTCGGAGCGGGCTGCGGCCTTATGCAATGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS TCA 72 bp | GCCAGGGAGAATACGCAATCGGATCTGTTTGAGGCCTaGGAACATGAAGGCGTCACTGGGCTCCACAGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: ARENTQSDLFEA*EHEGVTGLHRN Trigger: ATTTCTGTGGAGCCCAGTGACGCCTTCATGTTCTCAGGCCTCAAACAGATCCGATTGCGTATTCTCCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CAA 72 bp | CTTCATCAAATAAGTCTCCAAAGGCCTGGAATTGTTTaGCCATCCACGCGGCGTGCTCAAAGGCCAGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LHQISLQRPGIV*PSTRRAQRPAP Trigger: CGGAGCTGGCCTTTGAGCACGCCGCGTGGATGGCAAAACAATTCCAGGCCTTTGGAGACTTATTTGATGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CAA 72 bp | TGGTTGGTGAAGTTGGGAAACCTAAGCAAGTTGATGTaGAGCGACGGCAGCTGCTGGTACCCAGCCATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: WLVKLGNLSKLM*SDGSCWYPAIR Trigger: TCTGATGGCTGGGTACCAGCAGCTGCCGTCGCTCAACATCAACTTGCTTAGGTTTCCCAACTTCACCAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CAA 72 bp | GTCGGGATGAAACGTCTGAGCAGCTGGTTGGTGAAGTaGGGAAACCTAAGCAAGTTGATGTTGAGCGACGGC | + |
|
Preference number: 6 (lower is better) Translates to: VGMKRLSSWLVK*GNLSKLMLSDG Trigger: GCCGTCGCTCAACATCAACTTGCTTAGGTTTCCCAACTTCACCAACCAGCTGCTCAGACGTTTCATCCCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CAA 90 bp | AAAATGCTGGTCGGGATGAAACGTCTGAGCAGCTGGTTGGTGAAGTaGGGAAACCTAAGCAAGTTGATGTTGAGCGACGGCAGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KMLVGMKRLSSWLVK*GNLSKLMLSDGSCW Trigger: CCAGCAGCTGCCGTCGCTCAACATCAACTTGCTTAGGTTTCCCAACTTCACCAACCAGCTGCTCAGACGTTTCATCCCGACCAGCATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CAA 90 bp | GGCTTCACAAAAATGCTGGTCGGGATGAAACGTCTGAGCAGCTGGTaGGTGAAGTTGGGAAACCTAAGCAAGTTGATGTTGAGCGACGGC | + |
|
Preference number: 6 (lower is better) Translates to: GFTKMLVGMKRLSSW*VKLGNLSKLMLSDG Trigger: GCCGTCGCTCAACATCAACTTGCTTAGGTTTCCCAACTTCACCAACCAGCTGCTCAGACGTTTCATCCCGACCAGCATTTTTGTGAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS TCA 72 bp | AAGGCGTCACTGGGCTCCACAGAAATCTCCACATCTTaGACCAAGTCGGTCTTATTCTGCAGGTGGTACCTG | + |
|
Preference number: 6 (lower is better) Translates to: KASLGSTEISTS*TKSVLFCRWYL Trigger: CAGGTACCACCTGCAGAATAAGACCGACTTGGTTCAAGATGTGGAGATTTCTGTGGAGCCCAGTGACGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS GCA 72 bp | GTCAGCTCTCCGATTGGCACAGAAAGCATCCCAGACTaGTCGATGGACAGCATTATAGACAACATCAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VSSPIGTESIPD*SMDSIIDNIKA Trigger: GGCCTTGATGTTGTCTATAATGCTGTCCATCGAGCAGTCTGGGATGCTTTCTGTGCCAATCGGAGAGCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS GCA 72 bp | TTTCGCGTGCTGTTTTCGCTCCTGGGCATAGTAAGCTaGCTGCTGATAGTAGAAACCAGGGTTCTGCGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FRVLFSLLGIVS*LLIVETRVLRL Trigger: CAAACGCAGAACCCTGGTTTCTACTATCAGCAGGCAGCTTACTATGCCCAGGAGCGAAAACAGCACGCGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CCA 72 bp | CAAGAACGCCTGATTGTGTTTCTAAGGGATCAGGGTTaGGGTACATCACAGCAGCATCGTGGTTACACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QERLIVFLRDQG*GTSQQHRGYTG Trigger: CCCTGTGTAACCACGATGCTGCTGTGATGTACCCCAACCCTGATCCCTTAGAAACACAATCAGGCGTTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CAA 72 bp | ACCTTGAAAGAAATTGGTACCCGGTCAGCTCTCCGATaGGCACAGAAAGCATCCCAGACTGCTCGATGGACA | + |
|
Preference number: 6 (lower is better) Translates to: TLKEIGTRSALR*AQKASQTARWT Trigger: TGTCCATCGAGCAGTCTGGGATGCTTTCTGTGCCAATCGGAGAGCTGACCGGGTACCAATTTCTTTCAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CCA 72 bp | ATATTCATGGTCACCTGGGAGCACCTTGAAAGAAATTaGTACCCGGTCAGCTCTCCGATTGGCACAGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: IFMVTWEHLERN*YPVSSPIGTES Trigger: GCTTTCTGTGCCAATCGGAGAGCTGACCGGGTACCAATTTCTTTCAAGGTGCTCCCAGGTGACCATGAATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CCA 72 bp | TTTCAGAGTGGACGACACTTCTCTCCTTCAGCTGAATaGCAAGAATCCCTGCTTTCTCTTTCTCAGGGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: FQSGRHFSPSAE*QESLLSLSQGP Trigger: CGGACCCTGAGAAAGAGAAAGCAGGGATTCTTGCCATTCAGCTGAAGGAGAGAAGTGTCGTCCACTCTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CCA 72 bp | CTCTCCCATCTGAACCATGAGGTGGCTTTTCATCCGTaGGCACTTGTACTTCTTGAACTGGGCAACAGCATT | + |
|
Preference number: 6 (lower is better) Translates to: LSHLNHEVAFHP*ALVLLELGNSI Trigger: AATGCTGTTGCCCAGTTCAAGAAGTACAAGTGCCCACGGATGAAAAGCCACCTCATGGTTCAGATGGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CAA 72 bp | TCAAGAACGCCTGATTGTGTTTCTAAGGGATCAGGGTaGGGGTACATCACAGCAGCATCGTGGTTACACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRTPDCVSKGSG*GYITAASWLHR Trigger: CCTGTGTAACCACGATGCTGCTGTGATGTACCCCAACCCTGATCCCTTAGAAACACAATCAGGCGTTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS TCA 72 bp | TTGATGGAGCAAGCTGTAGCTCACTGGACACAATTGTaGGGGCCCAAGGAGAGGCACTTAAAACATCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LMEQAVAHWTQL*GPKERHLKHLS Trigger: TGACAGATGTTTTAAGTGCCTCTCCTTGGGCCCTCACAATTGTGTCCAGTGAGCTACAGCTTGCTCCATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CCA 72 bp | ATCTCATTCATTAGAGCAGGGGGCTCGTGTCGCAGGTaGACAGAGATGTTTGGGACTCTGGAAATGATCATT | + |
|
Preference number: 6 (lower is better) Translates to: ISFIRAGGSCRR*TEMFGTLEMII Trigger: AATGATCATTTCCAGAGTCCCAAACATCTCTGTCCACCTGCGACACGAGCCCCCTGCTCTAATGAATGAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039061.15 ENSMUST00000120987.2 |
||
| CDS CCA 72 bp | ACAAAAATGCTGGTCGGGATGAAACGTCTGAGCAGCTaGTTGGTGAAGTTGGGAAACCTAAGCAAGTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: TKMLVGMKRLSS*LVKLGNLSKLM Trigger: CATCAACTTGCTTAGGTTTCCCAACTTCACCAACCAGCTGCTCAGACGTTTCATCCCGACCAGCATTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
||
| CDS CAA 72 bp | AGCTGCCTGCTGATAGTAGAAACCAGGGTTCTGCGTTaGAATAGCTGTCAACCCCAACTTAATGGCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: SCLLIVETRVLR*NSCQPQLNGFI Trigger: GATGAAGCCATTAAGTTGGGGTTGACAGCTATTCAAACGCAGAACCCTGGTTTCTACTATCAGCAGGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CAA 72 bp | CGTGGGCACTTGTACTTCTTGAACTGGGCAACAGCATaGCTCAGAAGAGCGATTATTATTTCAGAGTGGACG | + |
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Preference number: 6 (lower is better) Translates to: RGHLYFLNWATA*LRRAIIISEWT Trigger: CGTCCACTCTGAAATAATAATCGCTCTTCTGAGCAATGCTGTTGCCCAGTTCAAGAAGTACAAGTGCCCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CAA 72 bp | TGTCTATCTGGGACTCCAGATGATCCATTGCAGTCATaGATGGAGCAAGCTGTAGCTCACTGGACACAATTG | + |
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Preference number: 6 (lower is better) Translates to: CLSGTPDDPLQS*MEQAVAHWTQL Trigger: CAATTGTGTCCAGTGAGCTACAGCTTGCTCCATCAATGACTGCAATGGATCATCTGGAGTCCCAGATAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CAA 72 bp | AGACAACTTTGTCTATCTGGGACTCCAGATGATCCATaGCAGTCATTGATGGAGCAAGCTGTAGCTCACTGG | + |
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Preference number: 6 (lower is better) Translates to: RQLCLSGTPDDP*QSLMEQAVAHW Trigger: CCAGTGAGCTACAGCTTGCTCCATCAATGACTGCAATGGATCATCTGGAGTCCCAGATAGACAAAGTTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CAA 90 bp | CTTTTCATCCGTGGGCACTTGTACTTCTTGAACTGGGCAACAGCATaGCTCAGAAGAGCGATTATTATTTCAGAGTGGACGACACTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LFIRGHLYFLNWATA*LRRAIIISEWTTLL Trigger: GAGAAGTGTCGTCCACTCTGAAATAATAATCGCTCTTCTGAGCAATGCTGTTGCCCAGTTCAAGAAGTACAAGTGCCCACGGATGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CAA 90 bp | CTGTCTGTAAGACAACTTTGTCTATCTGGGACTCCAGATGATCCATaGCAGTCATTGATGGAGCAAGCTGTAGCTCACTGGACACAATTG | + |
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Preference number: 6 (lower is better) Translates to: LSVRQLCLSGTPDDP*QSLMEQAVAHWTQL Trigger: CAATTGTGTCCAGTGAGCTACAGCTTGCTCCATCAATGACTGCAATGGATCATCTGGAGTCCCAGATAGACAAAGTTGTCTTACAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS TCA 72 bp | ATTATTTCAGAGTGGACGACACTTCTCTCCTTCAGCTaGATGGCAAGAATCCCTGCTTTCTCTTTCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: IISEWTTLLSFS*MARIPAFSFSG Trigger: CCCTGAGAAAGAGAAAGCAGGGATTCTTGCCATTCAGCTGAAGGAGAGAAGTGTCGTCCACTCTGAAATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS TCA 72 bp | AGCTTCACATCCCTGATTGGGGACTTCTCGTGGGACTaGACAGTGACAACCAAACAGTACATCTCATTCATT | + |
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Preference number: 6 (lower is better) Translates to: SFTSLIGDFSWD*TVTTKQYISFI Trigger: AATGAATGAGATGTACTGTTTGGTTGTCACTGTTCAGTCCCACGAGAAGTCCCCAATCAGGGATGTGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039061.15 ENSMUST00000120987.2 |
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| CDS TCA 72 bp | GTCTGTAAGACAACTTTGTCTATCTGGGACTCCAGATaGTCCATTGCAGTCATTGATGGAGCAAGCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: VCKTTLSIWDSR*SIAVIDGASCS Trigger: GCTACAGCTTGCTCCATCAATGACTGCAATGGATCATCTGGAGTCCCAGATAGACAAAGTTGTCTTACAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS GCA 72 bp | ATAGTCCAGCAGCTTCAAAGCTTTGGTGTAGTCCTTTaGATAGTAGTACTCCTCTCCCATCTGAACCATGAG | + |
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Preference number: 6 (lower is better) Translates to: IVQQLQSFGVVL*IVVLLSHLNHE Trigger: CTCATGGTTCAGATGGGAGAGGAGTACTACTATGCAAAGGACTACACCAAAGCTTTGAAGCTGCTGGACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CCA 72 bp | AACTTAATGGCTTCATCAAATAAGTCTCCAAAGGCCTaGAATTGTTTTGCCATCCACGCGGCGTGCTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: NLMASSNKSPKA*NCFAIHAACSK Trigger: CTTTGAGCACGCCGCGTGGATGGCAAAACAATTCCAGGCCTTTGGAGACTTATTTGATGAAGCCATTAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CAA 72 bp | TTGAATCAGGACGACTGCAACTTTTGTGTTTCTCCCTaGCAAACTTTGCCTGACAATCTCCACTCTGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: LNQDDCNFCVSP*QTLPDNLHSGS Trigger: GCTACCAGAGTGGAGATTGTCAGGCAAAGTTTGCAAGGGAGAAACACAAAAGTTGCAGTCGTCCTGATTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CCA 72 bp | TGGCTTTTCATCCGTGGGCACTTGTACTTCTTGAACTaGGCAACAGCATTGCTCAGAAGAGCGATTATTATT | + |
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Preference number: 6 (lower is better) Translates to: WLFIRGHLYFLN*ATALLRRAIII Trigger: AATAATAATCGCTCTTCTGAGCAATGCTGTTGCCCAGTTCAAGAAGTACAAGTGCCCACGGATGAAAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CAA 90 bp | CCTTCAGAAAAACATCAAACTCAACAGGAACATCCACGTGAAAACTaGGAGCGTGGAACTTGGCTTTGCATTGTACAAATGGCACGAAGT | + |
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Preference number: 6 (lower is better) Translates to: PSEKHQTQQEHPREN*ERGTWLCIVQMARS Trigger: ACTTCGTGCCATTTGTACAATGCAAAGCCAAGTTCCACGCTCCAAGTTTTCACGTGGATGTTCCTGTTGAGTTTGATGTTTTTCTGAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS TCA 72 bp | CTTCTCTATCCGAGACTTCTGCTCATCTTTCAGAGTTaGAGCTCGTCCAAGGAGTTCCAGAGAATAAGTAAT | + |
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Preference number: 6 (lower is better) Translates to: LLYPRLLLIFQS*SSSKEFQRISN Trigger: ATTACTTATTCTCTGGAACTCCTTGGACGAGCTTCAACTCTGAAAGATGAGCAGAAGTCTCGGATAGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS GCA 72 bp | TACATGGCAAATTTCAACAGTGCAAAAAGACCACATTaGCTTTTCAACCACCATAGTACATGGCTCCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: YMANFNSAKRPH*LFNHHSTWLLV Trigger: GACCAGGAGCCATGTACTATGGTGGTTGAAAAGGCAATGTGGTCTTTTTGCACTGTTGAAATTTGCCATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120987.2 |
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| CDS CCA 72 bp | AACATCAAACTCAACAGGAACATCCACGTGAAAACTTaGAGCGTGGAACTTGGCTTTGCATTGTACAAATGG | + |
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Preference number: 6 (lower is better) Translates to: NIKLNRNIHVKT*SVELGFALYKW Trigger: CCATTTGTACAATGCAAAGCCAAGTTCCACGCTCCAAGTTTTCACGTGGATGTTCCTGTTGAGTTTGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS TCA 72 bp | TTCAGAAAAACATCAAACTCAACAGGAACATCCACGTaGAAACTTGGAGCGTGGAACTTGGCTTTGCATTGT | + |
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Preference number: 6 (lower is better) Translates to: FRKTSNSTGTST*KLGAWNLALHC Trigger: ACAATGCAAAGCCAAGTTCCACGCTCCAAGTTTTCACGTGGATGTTCCTGTTGAGTTTGATGTTTTTCTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CAA 72 bp | AAACATCAAACTCAACAGGAACATCCACGTGAAAACTaGGAGCGTGGAACTTGGCTTTGCATTGTACAAATG | + |
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Preference number: 6 (lower is better) Translates to: KHQTQQEHPREN*ERGTWLCIVQM Trigger: CATTTGTACAATGCAAAGCCAAGTTCCACGCTCCAAGTTTTCACGTGGATGTTCCTGTTGAGTTTGATGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CAA 90 bp | GAACTAAGCACATCTTTCCCTGAGTCAGATTTTCTAAGACCTCACTaGCTTTGGATGCTTCTTCCAATACACAGAATTGGTTGTAAACCT | + |
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Preference number: 6 (lower is better) Translates to: ELSTSFPESDFLRPH*LWMLLPIHRIGCKP Trigger: AGGTTTACAACCAATTCTGTGTATTGGAAGAAGCATCCAAAGCAAGTGAGGTCTTAGAAAATCTGACTCAGGGAAAGATGTGCTTAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS TCA 72 bp | CTCTTTCCAGGTGCTCAAACTTTGTGGAAACAAATCTaGCTGCGACATCAAATGGAAAGACAGTTTCTATTG | + |
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Preference number: 6 (lower is better) Translates to: LFPGAQTLWKQI*LRHQMERQFLL Trigger: CAATAGAAACTGTCTTTCCATTTGATGTCGCAGTCAGATTTGTTTCCACAAAGTTTGAGCACCTGGAAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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| CDS CAA 72 bp | GGCAATCCTATAATTCTTCAGGGCGTTTTGTGTATCTaGTTTCAACTCACTGAAGAAAGCTATTTTAAACTG | + |
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Preference number: 6 (lower is better) Translates to: GNPIILQGVLCI*FQLTEESYFKL Trigger: CAGTTTAAAATAGCTTTCTTCAGTGAGTTGAAACAAGATACACAAAACGCCCTGAAGAATTATAGGATTGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039061.15 |
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