Pregenerated sensors for TRAPPC10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000374Ensembl transcript IDs: ENSMUST00000000384.8, ENSMUST00000217858.2, ENSMUST00000217980.2
Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CTAGGAGAGGGCTGTGAGAAGAGACCAGACCCTCTTGGGAGGGTCTaGGGAGTTGGGGATACCAGCACGGGGCACAGGGCCAGGGATAAA | + |
Preference number: 1 (lower is better) Translates to: LGEGCEKRPDPLGRV*GVGDTSTGHRARDK Trigger: TTTATCCCTGGCCCTGTGCCCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAGGGTCTGGTCTCTTCTCACAGCCCTCTCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR GCA 90 bp | CCTAAGCCATCTCCACACCACACTTCCCTCCTCTCTGGTCTTCTCTaGAGTACCTTTCACGTGGCTTCTACAGATGGATCTTGTGATCTG | + |
Preference number: 1 (lower is better) Translates to: PKPSPHHTSLLSGLL*STFHVASTDGSCDL Trigger: CAGATCACAAGATCCATCTGTAGAAGCCACGTGAAAGGTACTGCAGAGAAGACCAGAGAGGAGGGAAGTGTGGTGTGGAGATGGCTTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR-3UTR CCA 90 bp | AACCCGTTGGTGCGGTATGACTGCAACCCAGTGGCCCAGCTGAGGTCCTCCAGGGAGACCAGACCCTCTTaGGAGGGTCTGAGGAGTTGG | + |
Preference number: 2 (lower is better) Translates to: NPLVRYDCNPVAQLRSSRETRPS*EGLRSW Trigger: CCAACTCCTCAGACCCTCCCAAGAGGGTCTGGTCTC...CCTGGAGGACCTCAGCTGGGCCACTGGGTTGCAGTCATACCGCACCAACGGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR-3UTR TCA 90 bp | TCCACACCACACTTCCCTCCTCTCTGGTCTTCTCTGCAGTACCTTTCACGTGGCCCTCTTGGGAGGGTCTaGGGAGTTGGGGATACCAGC | + |
Preference number: 2 (lower is better) Translates to: STPHFPPLWSSLQYLSRGPLGRV*GVGDTS Trigger: GCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAGG...GCCACGTGAAAGGTACTGCAGAGAAGACCAGAGAGGAGGGAAGTGTGGTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR-3UTR TCA 90 bp | CTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCCCCTCTCAAGGGACTGGGCTTTGTaGGAAGGGCACACAGTGCCA | + |
Preference number: 2 (lower is better) Translates to: LQALSPLRLIRAQERPLSRDWAL*EGHTVP Trigger: TGGCACTGTGTGCCCTTCTCACAAAGCCCAGTCCCT...TGAGAGGGGCCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR-3UTR CCA 90 bp | AACCCGTTGGTGCGGTATGACTGCAACCCAGTGGCCCAGCTGAGGTCCTCCAGGGATCTTGTGATCTGCTaGGCATCCCAAGGCACAGAA | + |
Preference number: 2 (lower is better) Translates to: NPLVRYDCNPVAQLRSSRDLVIC*ASQGTE Trigger: TTCTGTGCCTTGGGATGCCCAGCAGATCACAAGATC...CCTGGAGGACCTCAGCTGGGCCACTGGGTTGCAGTCATACCGCACCAACGGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR-3UTR TCA 90 bp | GCTGAGGTCCTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGACTCCACTGCGCAGCTaGAGGACACTGTTCTCTGCT | + |
Preference number: 2 (lower is better) Translates to: AEVLQALSPLRLIRAQERTPLRS*RTLFSA Trigger: AGCAGAGAACAGTGTCCTTCAGCTGCGCAGTGGAGT...CCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAGGACCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR-3UTR TCA 90 bp | GCTGAGGTCCTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGACTAGGAGAGGGCTGTaGGAAGAGACCAGACCCTCT | + |
Preference number: 2 (lower is better) Translates to: AEVLQALSPLRLIRAQERTRRGL*EETRPS Trigger: AGAGGGTCTGGTCTCTTCTCACAGCCCTCTCCTAGT...CCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAGGACCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR-3UTR TCA 90 bp | GGAGCAGGGCAGTGGAGCACTCTTCTCTTGAGTTGGAGTAGACCACGGCTCTGTTTGCTTCCACGTTGCTaGGCTGGAGGCTGTCTCCAT | + |
Preference number: 2 (lower is better) Translates to: GAGQWSTLLLSWSRPRLCLLPRC*AGGCLH Trigger: ATGGAGACAGCCTCCAGCTCAGCAACGTGGAAGCAA...ACAGAGCCGTGGTCTACTCCAACTCAAGAGAAGAGTGCTCCACTGCCCTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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3UTR-3UTR TCA 90 bp | GCATCCAGCTCGTCGTACTGTACCAGGGCGTCCTCAAACTGCTGCAGCATCTCAGCTCCTCCTGAACCATaGAGTATTCGCAGAAGCTCC | + |
Preference number: 2 (lower is better) Translates to: ASSSSYCTRASSNCCSISAPPEP*SIRRSS Trigger: GGAGCTTCTGCGAATACTTCATGGTTCAGGAGGAGC...TGAGATGCTGCAGCAGTTTGAGGACGCCCTGGTACAGTACGACGAGCTGGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217980.2 |
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3UTR-3UTR GCA 90 bp | GATCAGAGCACAAGAGAGGCCCCTCTCATCTTCACTCCAGATGGAGCATCTTCAGAGAAGGGCACACAGTaGCATAAGAGGACTGCAGTC | + |
Preference number: 2 (lower is better) Translates to: DQSTREAPLIFTPDGASSEKGTQ*HKRTAV Trigger: GACTGCAGTCCTCTTATGGCACTGTGTGCCCTTCTC...TGAAGATGCTCCATCTGGAGTGAAGATGAGAGGGGCCTCTCTTGTGCTCTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR-3UTR CCA 90 bp | GCTGAGGTCCTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGGCAGTACCTTTCACGTaGCTTCTACAGATGGATCTT | + |
Preference number: 2 (lower is better) Translates to: AEVLQALSPLRLIRAQERAVPFT*LLQMDL Trigger: AAGATCCATCTGTAGAAGCCACGTGAAAGGTACTGC...CCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAGGACCTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR-3UTR CCA 90 bp | GCTGAGGTCCTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCATCTTCACTCCAGATaGAGCATCTTCAGTTCCAAG | + |
Preference number: 2 (lower is better) Translates to: AEVLQALSPLRLIRAQERHLHSR*SIFSSK Trigger: CTTGGAACTGAAGATGCTCCATCTGGAGTGAAGATG...CCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAGGACCTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR CAA 90 bp | GGCTCTGTCCTCTTTTCCCTCAAAGTCCGCATGTCATCCTCAAACTaGCCGAGGTTTTTGGTGAAAGACATGAGCAGCAGAGTCCTGAGT | + |
Preference number: 2 (lower is better) Translates to: GSVLFSLKVRMSSSN*PRFLVKDMSSRVLS Trigger: ACTCAGGACTCTGCTGCTCATGTCTTTCACCAAAAACCTCGGCAAGTTTGAGGATGACATGCGGACTTTGAGGGAAAAGAGGACAGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217980.2 |
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3UTR-3UTR TCA 90 bp | CTGCTGCAGCATCTCAAAGACAAACGCAAGCTCCTCCTGAACCATGAAGTATTCGCATTCCAGGATTCCTaGGTTCGAGAAGAGTCCTTC | + |
Preference number: 2 (lower is better) Translates to: LLQHLKDKRKLLLNHEVFAFQDS*VREESF Trigger: GAAGGACTCTTCTCGAACTCAGGAATCCTGGAATGC...GAATACTTCATGGTTCAGGAGGAGCTTGCGTTTGTCTTTGAGATGCTGCAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217980.2 |
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3UTR-3UTR GCA 90 bp | GGAGCATCTTCAGTTCCAAGACTTAAGGTGCAAAAGATGTCGATTATACAGCTACTCTCTGGTCTTCTCTaGAGTACCTTTCACGTGGCT | + |
Preference number: 2 (lower is better) Translates to: GASSVPRLKVQKMSIIQLLSGLL*STFHVA Trigger: AGCCACGTGAAAGGTACTGCAGAGAAGACCAGAGAG...TAGCTGTATAATCGACATCTTTTGCACCTTAAGTCTTGGAACTGAAGATGCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR-3UTR CAA 90 bp | AACCCGTTGGTGCGGTATGACTGCAACCCAGTGGCCCAGCTGAGGTCCTCCAGGGGAGGGTCTGAGGAGTaGGGGATACCAGCACGGGGC | + |
Preference number: 3 (lower is better) Translates to: NPLVRYDCNPVAQLRSSRGGSEE*GIPARG Trigger: GCCCCGTGCTGGTATCCCCAACTCCTCAGACCCTCC...CCTGGAGGACCTCAGCTGGGCCACTGGGTTGCAGTCATACCGCACCAACGGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR TCA 72 bp | GGCTGTGAGAAGAGACCAGACCCTCTTGGGAGGGTCTaGGGAGTTGGGGATACCAGCACGGGGCACAGGGCC | + |
Preference number: 3 (lower is better) Translates to: GCEKRPDPLGRV*GVGDTSTGHRA Trigger: GGCCCTGTGCCCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAGGGTCTGGTCTCTTCTCACAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR TCA 72 bp | CATGGCGGTGTATGGAAAGCCACTAGGAGAGGGCTGTaGGAAGAGACCAGACCCTCTTGGGAGGGTCTGAGG | + |
Preference number: 3 (lower is better) Translates to: HGGVWKATRRGL*EETRPSWEGLR Trigger: CCTCAGACCCTCCCAAGAGGGTCTGGTCTCTTCTCACAGCCCTCTCCTAGTGGCTTTCCATACACCGCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR CCA 72 bp | TCCGGAGCAGGGCAGTGGAGCACTCTTCTCTTGAGTTaGAGTAGACCACGGCTCTGTTCTCTGCCTGACACA | + |
Preference number: 3 (lower is better) Translates to: SGAGQWSTLLLS*SRPRLCSLPDT Trigger: TGTGTCAGGCAGAGAACAGAGCCGTGGTCTACTCCAACTCAAGAGAAGAGTGCTCCACTGCCCTGCTCCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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3UTR GCA 72 bp | TCCAGCTCGTCGTACTGTACCAGGGCGTCCTCAAACTaGTGCAGCATCTCAAAGACAAACGCAAGCTCCTCC | + |
Preference number: 3 (lower is better) Translates to: SSSSYCTRASSN*CSISKTNASSS Trigger: GGAGGAGCTTGCGTTTGTCTTTGAGATGCTGCAGCAGTTTGAGGACGCCCTGGTACAGTACGACGAGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217980.2 |
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3UTR GCA 72 bp | CACGGCTCTGTTCTCTGCCTGACACAAGATGAGCATTaGTTCCACGTTGCTGAGCTGGAGGCTGTCTCCATT | + |
Preference number: 3 (lower is better) Translates to: HGSVLCLTQDEH*FHVAELEAVSI Trigger: AATGGAGACAGCCTCCAGCTCAGCAACGTGGAAGCAATGCTCATCTTGTGTCAGGCAGAGAACAGAGCCGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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3UTR TCA 72 bp | TTACAACCAAAAGTAAATGAACCCGTTGGTGCGGTATaGCTGCAACCCAGTGGCCCAGCTGAGGTCCTCCAG | + |
Preference number: 3 (lower is better) Translates to: LQPKVNEPVGAV*LQPSGPAEVLQ Trigger: CTGGAGGACCTCAGCTGGGCCACTGGGTTGCAGTCATACCGCACCAACGGGTTCATTTACTTTTGGTTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR GCA 72 bp | TCTCCACACCACACTTCCCTCCTCTCTGGTCTTCTCTaGAGTACCTTTCACGTGGCTTCTACAGATGGATCT | + |
Preference number: 3 (lower is better) Translates to: SPHHTSLLSGLL*STFHVASTDGS Trigger: AGATCCATCTGTAGAAGCCACGTGAAAGGTACTGCAGAGAAGACCAGAGAGGAGGGAAGTGTGGTGTGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR GCA 72 bp | ACACTGTTCTCTGCTGTGTCTGTAGCTAGGCAGGACTaGCAAAGTCTGGTTAGAGCTAGTGTGTTACCACAG | + |
Preference number: 3 (lower is better) Translates to: TLFSAVSVARQD*QSLVRASVLPQ Trigger: CTGTGGTAACACACTAGCTCTAACCAGACTTTGGCAGTCCTGCCTAGCTACAGACACAGCAGAGAACAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | CTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGGCACAGGGCCAGGGGGTGTAGACCACCGGTaGCTGTGGCTCCTCAGGGGC | + |
Preference number: 4 (lower is better) Translates to: LLGGSEELGIPARGTGPGGVDHR*LWLLRG Trigger: GCCCCTGAGGAGCCACAGCCACCGGTGGTCTACACC...CCCTGGCCCTGTGCCCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | CTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGGCACAGGGCCAGGGAAGAGCTTCAGCTCCTaGACACAGCTATGCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: LLGGSEELGIPARGTGPGKSFSS*TQLCSS Trigger: GCTGCTGCATAGCTGTGTGCAGGAGCTGAAGCTCTT...CCCTGGCCCTGTGCCCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | GGAGCAGGGCAGTGGAGCACTCTTCTCTTGAGTTGGAGTAGACCACGGCTCTGTGCAGGGTCACACTGCTaGACCTCAGCACGTGGGCCC | + |
Preference number: 4 (lower is better) Translates to: GAGQWSTLLLSWSRPRLCAGSHC*TSARGP Trigger: GGGCCCACGTGCTGAGGTGCAGCAGTGTGACCCTGC...ACAGAGCCGTGGTCTACTCCAACTCAAGAGAAGAGTGCTCCACTGCCCTGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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CDS-3UTR CCA 90 bp | GCATCCAGCTCGTCGTACTGTACCAGGGCGTCCTCAAACTGCTGCAGCATCTCAGGTGTAGACCACCGGTaGCTGTGGCTCCTCAGGGGC | + |
Preference number: 4 (lower is better) Translates to: ASSSSYCTRASSNCCSISGVDHR*LWLLRG Trigger: GCCCCTGAGGAGCCACAGCCACCGGTGGTCTACACC...TGAGATGCTGCAGCAGTTTGAGGACGCCCTGGTACAGTACGACGAGCTGGATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217980.2 |
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CDS-3UTR CCA 90 bp | CTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGGCACAGGGCCAGGGTACCACCTTGTGACCTaGGTTGTCCTCTTGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: LLGGSEELGIPARGTGPGYHLVT*VVLLLA Trigger: AGCCAGCAAGAGGACAACCCAGGTCACAAGGTGGTA...CCCTGGCCCTGTGCCCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | TCCACACCACACTTCCCTCCTCTCTGGTCTTCTCTGCAGTACCTTTCACGTGGCCTGCACCTCAGCACGTaGGCCCCATCCTCCAGGGCC | + |
Preference number: 4 (lower is better) Translates to: STPHFPPLWSSLQYLSRGLHLST*APSSRA Trigger: GGCCCTGGAGGATGGGGCCCACGTGCTGAGGTGCAG...GCCACGTGAAAGGTACTGCAGAGAAGACCAGAGAGGAGGGAAGTGTGGTGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | AACCCGTTGGTGCGGTATGACTGCAACCCAGTGGCCCAGCTGAGGTCCTCCAGGCTTCCTGTGGAGCTCTaGTGTCCCCGGAACACTGGT | + |
Preference number: 4 (lower is better) Translates to: NPLVRYDCNPVAQLRSSRLPVEL*CPRNTG Trigger: ACCAGTGTTCCGGGGACACCAGAGCTCCACAGGAAG...CCTGGAGGACCTCAGCTGGGCCACTGGGTTGCAGTCATACCGCACCAACGGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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3UTR CAA 72 bp | AGAAGAGACCAGACCCTCTTGGGAGGGTCTGAGGAGTaGGGGATACCAGCACGGGGCACAGGGCCAGGGATA | + |
Preference number: 4 (lower is better) Translates to: RRDQTLLGGSEE*GIPARGTGPGI Trigger: TATCCCTGGCCCTGTGCCCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAGGGTCTGGTCTCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | CTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCCCCTCTCAGCTTCCTTGTGTGTGTaGCAGGCAGGGCCCAGCCCT | + |
Preference number: 4 (lower is better) Translates to: LQALSPLRLIRAQERPLSASLCV*QAGPSP Trigger: AGGGCTGGGCCCTGCCTGTCACACACACAAGGAAGC...TGAGAGGGGCCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | CTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGGCACAGGGCCAGGGCAACCTTCTATCCTCTaGAGCACCTCTAGACAGCTC | + |
Preference number: 4 (lower is better) Translates to: LLGGSEELGIPARGTGPGQPSIL*STSRQL Trigger: GAGCTGTCTAGAGGTGCTGCAGAGGATAGAAGGTTG...CCCTGGCCCTGTGCCCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | CTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGGCACAGGGCCAGGGGAAGAGCCACTCTCCTaGCTCCTTAAAAGCATGTGG | + |
Preference number: 4 (lower is better) Translates to: LLGGSEELGIPARGTGPGEEPLS*LLKSMW Trigger: CCACATGCTTTTAAGGAGGCAGGAGAGTGGCTCTTC...CCCTGGCCCTGTGCCCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | TCCACACCACACTTCCCTCCTCTCTGGTCTTCTCTGCAGTACCTTTCACGTGGCGCAGGGTCACACTGCTaGACCTCAGCACGTGGGCCC | + |
Preference number: 4 (lower is better) Translates to: STPHFPPLWSSLQYLSRGAGSHC*TSARGP Trigger: GGGCCCACGTGCTGAGGTGCAGCAGTGTGACCCTGC...GCCACGTGAAAGGTACTGCAGAGAAGACCAGAGAGGAGGGAAGTGTGGTGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | GCTGAGGTCCTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGGCTGCAGGGTCACACTaGTGCACCTCAGCACGTGGG | + |
Preference number: 4 (lower is better) Translates to: AEVLQALSPLRLIRAQERAAGSH*CTSARG Trigger: CCCACGTGCTGAGGTGCAGCAGTGTGACCCTGCAGC...CCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAGGACCTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | GAAGAGACCAGACCCTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGGCAGACAGCAGAGAGTaGTCGGTCCTGAAGGGCACA | + |
Preference number: 4 (lower is better) Translates to: EETRPSWEGLRSWGYQHGADSRE*SVLKGT Trigger: TGTGCCCTTCAGGACCGAGCACTCTCTGCTGTCTGC...CCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAGGGTCTGGTCTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | GGAGTAGACCACGGCTCTGTTCTCTGCCTGACACAAGATGAGCATTGCTTCCACCTGCACCTCAGCACGTaGGCCCCATCCTCCAGGGCC | + |
Preference number: 4 (lower is better) Translates to: GVDHGSVLCLTQDEHCFHLHLST*APSSRA Trigger: GGCCCTGGAGGATGGGGCCCACGTGCTGAGGTGCAG...GTGGAAGCAATGCTCATCTTGTGTCAGGCAGAGAACAGAGCCGTGGTCTACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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CDS-3UTR CCA 90 bp | GAAGAGACCAGACCCTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGGCTCGCTGCTGGAAGTaGAGTGTGTGCTGCCTCTAC | + |
Preference number: 4 (lower is better) Translates to: EETRPSWEGLRSWGYQHGARCWK*SVCCLY Trigger: GTAGAGGCAGCACACACTCCACTTCCAGCAGCGAGC...CCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAGGGTCTGGTCTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | CTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGGCACAGGGCCAGGGCTCAGGTCAGTAGCATaGCCCTTGTCTTCCAGATTA | + |
Preference number: 4 (lower is better) Translates to: LLGGSEELGIPARGTGPGLRSVA*PLSSRL Trigger: TAATCTGGAAGACAAGGGTCATGCTACTGACCTGAG...CCCTGGCCCTGTGCCCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | TCCACACCACACTTCCCTCCTCTCTGGTCTTCTCTGCAGTACCTTTCACGTGGCTCCTGCACACAGCTATaGAGCAGCTCCAGGGCGCGC | + |
Preference number: 4 (lower is better) Translates to: STPHFPPLWSSLQYLSRGSCTQL*SSSRAR Trigger: GCGCGCCCTGGAGCTGCTGCATAGCTGTGTGCAGGA...GCCACGTGAAAGGTACTGCAGAGAAGACCAGAGAGGAGGGAAGTGTGGTGTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | AACCCGTTGGTGCGGTATGACTGCAACCCAGTGGCCCAGCTGAGGTCCTCCAGGCCATTGGAAGTCTTGTaGTTGGTCAGCCACTCGGCT | + |
Preference number: 4 (lower is better) Translates to: NPLVRYDCNPVAQLRSSRPLEVL*LVSHSA Trigger: AGCCGAGTGGCTGACCAAGCACAAGACTTCCAATGG...CCTGGAGGACCTCAGCTGGGCCACTGGGTTGCAGTCATACCGCACCAACGGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | CTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGGCACAGGGCCAGGGCTCAGATTCCACGAGTaGTTCATCCTTGTCCACATC | + |
Preference number: 4 (lower is better) Translates to: LLGGSEELGIPARGTGPGLRFHE*FILVHI Trigger: GATGTGGACAAGGATGAAGCACTCGTGGAATCTGAG...CCCTGGCCCTGTGCCCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | GAAGAGACCAGACCCTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGCAATGGCCAGCTCTCTaGGAATCCTTCTGCTTCCTG | + |
Preference number: 4 (lower is better) Translates to: EETRPSWEGLRSWGYQHGQWPAL*ESFCFL Trigger: CAGGAAGCAGAAGGATTCTCAGAGAGCTGGCCATTG...CCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAGGGTCTGGTCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | AACCCGTTGGTGCGGTATGACTGCAACCCAGTGGCCCAGCTGAGGTCCTCCAGGTGGCACTCTGCTAGCTaGTTCCTTGTGTGTGTGACA | + |
Preference number: 4 (lower is better) Translates to: NPLVRYDCNPVAQLRSSRWHSAS*FLVCVT Trigger: TGTCACACACACAAGGAAGCAGCTAGCAGAGTGCCA...CCTGGAGGACCTCAGCTGGGCCACTGGGTTGCAGTCATACCGCACCAACGGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | AACCCGTTGGTGCGGTATGACTGCAACCCAGTGGCCCAGCTGAGGTCCTCCAGGTTCAGCCTTGCAAACTaGATGGGCAGTACCACCTTG | + |
Preference number: 4 (lower is better) Translates to: NPLVRYDCNPVAQLRSSRFSLAN*MGSTTL Trigger: CAAGGTGGTACTGCCCATGCAGTTTGCAAGGCTGAA...CCTGGAGGACCTCAGCTGGGCCACTGGGTTGCAGTCATACCGCACCAACGGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | CACGGCTCTGTTCTCTGCCTGACACAAGATGAGCATTGCTTCCACGTTGCTGAGGCTGCAGGGTCACACTaGTGCACCTCAGCACGTGGG | + |
Preference number: 4 (lower is better) Translates to: HGSVLCLTQDEHCFHVAEAAGSH*CTSARG Trigger: CCCACGTGCTGAGGTGCAGCAGTGTGACCCTGCAGC...CTCAGCAACGTGGAAGCAATGCTCATCTTGTGTCAGGCAGAGAACAGAGCCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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CDS-3UTR TCA 90 bp | CTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCCCCTCTCATTGCTTCCACGTTGCTaGGCTGGAGGCTGTCTCCAT | + |
Preference number: 4 (lower is better) Translates to: LQALSPLRLIRAQERPLSLLPRC*AGGCLH Trigger: ATGGAGACAGCCTCCAGCTCAGCAACGTGGAAGCAA...TGAGAGGGGCCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | AACCCGTTGGTGCGGTATGACTGCAACCCAGTGGCCCAGCTGAGGTCCTCCAGGGCGTCCTCAAACTGCTaGAGCATCTCAAAGACAAAC | + |
Preference number: 4 (lower is better) Translates to: NPLVRYDCNPVAQLRSSRASSNC*SISKTN Trigger: GTTTGTCTTTGAGATGCTGCAGCAGTTTGAGGACGC...CCTGGAGGACCTCAGCTGGGCCACTGGGTTGCAGTCATACCGCACCAACGGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | CTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCCCCTCTCAAAGTGGAGTGTGTGCTaGCTCTACTCCGCAAGCTGC | + |
Preference number: 4 (lower is better) Translates to: LQALSPLRLIRAQERPLSKWSVC*LYSASC Trigger: GCAGCTTGCGGAGTAGAGGCAGCACACACTCCACTT...TGAGAGGGGCCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | GCTGAGGTCCTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGTGGGCTTGTTCTCCATaGTGTAGACCACCGGTGGCT | + |
Preference number: 4 (lower is better) Translates to: AEVLQALSPLRLIRAQERWACSP*CRPPVA Trigger: AGCCACCGGTGGTCTACACCATGGAGAACAAGCCCA...CCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAGGACCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | GCTGAGGTCCTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCCATGTGGGCAATGTTaGAGTCTATCTGGGCCCGGT | + |
Preference number: 4 (lower is better) Translates to: AEVLQALSPLRLIRAQERPCGQC*SLSGPG Trigger: ACCGGGCCCAGATAGACTCCAACATTGCCCACATGG...CCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAGGACCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | AACCCGTTGGTGCGGTATGACTGCAACCCAGTGGCCCAGCTGAGGTCCTCCAGGAAGCTAAGGATCTCCTaGCAGAAGTATTTCCGCTCC | + |
Preference number: 4 (lower is better) Translates to: NPLVRYDCNPVAQLRSSRKLRIS*QKYFRS Trigger: GGAGCGGAAATACTTCTGCCAGGAGATCCTTAGCTT...CCTGGAGGACCTCAGCTGGGCCACTGGGTTGCAGTCATACCGCACCAACGGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | TCCACACCACACTTCCCTCCTCTCTGGTCTTCTCTGCAGTACCTTTCACGTGGCGCAATCTGGTCCACGTaGACAGGGATGGGCATCTGG | + |
Preference number: 4 (lower is better) Translates to: STPHFPPLWSSLQYLSRGAIWST*TGMGIW Trigger: CCAGATGCCCATCCCTGTCCACGTGGACCAGATTGC...GCCACGTGAAAGGTACTGCAGAGAAGACCAGAGAGGAGGGAAGTGTGGTGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | CTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCCCCTCTCAGCTCCTCCTGAACCATaGAGTATTCGCAGAAGCTCC | + |
Preference number: 4 (lower is better) Translates to: LQALSPLRLIRAQERPLSAPPEP*SIRRSS Trigger: GGAGCTTCTGCGAATACTTCATGGTTCAGGAGGAGC...TGAGAGGGGCCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | GGAGCATCTTCAGTTCCAAGACTTAAGGTGCAAAAGATGTCGATTATACAGCTAAGCTCCAGGGCGCGCTaGGCCACCTCCCAGGGCCGC | + |
Preference number: 4 (lower is better) Translates to: GASSVPRLKVQKMSIIQLSSRAR*ATSQGR Trigger: GCGGCCCTGGGAGGTGGCTCAGCGCGCCCTGGAGCT...TAGCTGTATAATCGACATCTTTTGCACCTTAAGTCTTGGAACTGAAGATGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | GAAGAGACCAGACCCTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGGATCAACTGTTCTGTTaGGATCTTCTGAGTTGGGCC | + |
Preference number: 4 (lower is better) Translates to: EETRPSWEGLRSWGYQHGDQLFC*DLLSWA Trigger: GGCCCAACTCAGAAGATCTCAACAGAACAGTTGATC...CCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAGGGTCTGGTCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | GCTGAGGTCCTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGATGTTGGAGTCTATCTaGGCCCGGTCACAGCAACCT | + |
Preference number: 4 (lower is better) Translates to: AEVLQALSPLRLIRAQERMLESI*ARSQQP Trigger: AGGTTGCTGTGACCGGGCCCAGATAGACTCCAACAT...CCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAGGACCTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | GCTGAGGTCCTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGGGGTTGTCCTCTTGCTaGCTGGCAAAGCTAAGGATC | + |
Preference number: 4 (lower is better) Translates to: AEVLQALSPLRLIRAQERGLSSC*LAKLRI Trigger: GATCCTTAGCTTTGCCAGCCAGCAAGAGGACAACCC...CCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAGGACCTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | GAAGAGACCAGACCCTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGCATGGACCACAGCATTaGGAGGGTCAAAATGGAGAT | + |
Preference number: 4 (lower is better) Translates to: EETRPSWEGLRSWGYQHGHGPQH*EGQNGD Trigger: ATCTCCATTTTGACCCTCCCAATGCTGTGGTCCATG...CCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAGGGTCTGGTCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | GCTTCTACAGATGGATCTTGTGATCTGCTGGGCATCCCAAGGCACAGAAGGGGTGTTGACCACGTACTGTaGGAAGAGGGCATCCAGCTC | + |
Preference number: 4 (lower is better) Translates to: ASTDGSCDLLGIPRHRRGVDHVL*EEGIQL Trigger: GAGCTGGATGCCCTCTTCTCACAGTACGTGGTCAAC...ACCCCTTCTGTGCCTTGGGATGCCCAGCAGATCACAAGATCCATCTGTAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | TCCACACCACACTTCCCTCCTCTCTGGTCTTCTCTGCAGTACCTTTCACGTGGCTTCAAAGGCCTCTACTaGGGACAGTGCTTCCTGGAG | + |
Preference number: 4 (lower is better) Translates to: STPHFPPLWSSLQYLSRGFKGLY*GQCFLE Trigger: CTCCAGGAAGCACTGTCCTCAGTAGAGGCCTTTGAA...GCCACGTGAAAGGTACTGCAGAGAAGACCAGAGAGGAGGGAAGTGTGGTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | TCCACACCACACTTCCCTCCTCTCTGGTCTTCTCTGCAGTACCTTTCACGTGGCACAGTACTCAGCTCCTaGAGCAGGAAGGATCTCAGC | + |
Preference number: 4 (lower is better) Translates to: STPHFPPLWSSLQYLSRGTVLSS*SRKDLS Trigger: GCTGAGATCCTTCCTGCTTCAGGAGCTGAGTACTGT...GCCACGTGAAAGGTACTGCAGAGAAGACCAGAGAGGAGGGAAGTGTGGTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | GGAGCAGGGCAGTGGAGCACTCTTCTCTTGAGTTGGAGTAGACCACGGCTCTGTGAAGAGCCACTCTCCTaGCTCCTTAAAAGCATGTGG | + |
Preference number: 4 (lower is better) Translates to: GAGQWSTLLLSWSRPRLCEEPLS*LLKSMW Trigger: CCACATGCTTTTAAGGAGGCAGGAGAGTGGCTCTTC...ACAGAGCCGTGGTCTACTCCAACTCAAGAGAAGAGTGCTCCACTGCCCTGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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CDS-3UTR GCA 90 bp | GATCAGAGCACAAGAGAGGCCCCTCTCATCTTCACTCCAGATGGAGCATCTTCACACGTGGTACGCAGGTaGAGTGGGAAGACCGATGCT | + |
Preference number: 4 (lower is better) Translates to: DQSTREAPLIFTPDGASSHVVRR*SGKTDA Trigger: AGCATCGGTCTTCCCACTGCACCTGCGTACCACGTG...TGAAGATGCTCCATCTGGAGTGAAGATGAGAGGGGCCTCTCTTGTGCTCTGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | TCCACACCACACTTCCCTCCTCTCTGGTCTTCTCTGCAGTACCTTTCACGTGGCAGCTGGTCATCTAGGTaGTTGTCCACTGACAGGCTG | + |
Preference number: 4 (lower is better) Translates to: STPHFPPLWSSLQYLSRGSWSSR*LSTDRL Trigger: CAGCCTGTCAGTGGACAAGCACCTAGATGACCAGCT...GCCACGTGAAAGGTACTGCAGAGAAGACCAGAGAGGAGGGAAGTGTGGTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | TCCACACCACACTTCCCTCCTCTCTGGTCTTCTCTGCAGTACCTTTCACGTGGCAAAAAGTCAGCCAGTTaGCACCATCCCCAGCTCCGA | + |
Preference number: 4 (lower is better) Translates to: STPHFPPLWSSLQYLSRGKKSAS*HHPQLR Trigger: TCGGAGCTGGGGATGGTGCCAACTGGCTGACTTTTT...GCCACGTGAAAGGTACTGCAGAGAAGACCAGAGAGGAGGGAAGTGTGGTGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | GAAGAGACCAGACCCTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGTATACATCTCAATGGTaGCATGGGACAAGTCCAGGT | + |
Preference number: 4 (lower is better) Translates to: EETRPSWEGLRSWGYQHGYTSQW*HGTSPG Trigger: ACCTGGACTTGTCCCATGCCACCATTGAGATGTATA...CCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAGGGTCTGGTCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | GCTGAGGTCCTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCTTTTCCAACAAGCTTaGCAGATCGAATCCGCCCGA | + |
Preference number: 4 (lower is better) Translates to: AEVLQALSPLRLIRAQERLFQQA*QIESAR Trigger: TCGGGCGGATTCGATCTGCCAAGCTTGTTGGAAAAG...CCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAGGACCTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | CTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCCCCTCTCACGTCATACTGTACAATaGGGTGGATGTGTGCCAGGA | + |
Preference number: 4 (lower is better) Translates to: LQALSPLRLIRAQERPLSRHTVQ*GGCVPG Trigger: TCCTGGCACACATCCACCCCATTGTACAGTATGACG...TGAGAGGGGCCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | AACCCGTTGGTGCGGTATGACTGCAACCCAGTGGCCCAGCTGAGGTCCTCCAGGAGTTCTGACAGGTTCTaGACACAGACTTGCACATAT | + |
Preference number: 4 (lower is better) Translates to: NPLVRYDCNPVAQLRSSRSSDRF*TQTCTY Trigger: ATATGTGCAAGTCTGTGTCCAGAACCTGTCAGAACT...CCTGGAGGACCTCAGCTGGGCCACTGGGTTGCAGTCATACCGCACCAACGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | GCATCCAGCTCGTCGTACTGTACCAGGGCGTCCTCAAACTGCTGCAGCATCTCAAGCTCCTCCTTGAACTaGACAAAGTTGGATTCCAGG | + |
Preference number: 4 (lower is better) Translates to: ASSSSYCTRASSNCCSISSSSLN*TKLDSR Trigger: CCTGGAATCCAACTTTGTTCAGTTCAAGGAGGAGCT...TGAGATGCTGCAGCAGTTTGAGGACGCCCTGGTACAGTACGACGAGCTGGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217980.2 |
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CDS-3UTR TCA 90 bp | CTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCCCCTCTCAGCAGCAGCTCCTCCTTaGACTGAACAAAGTTGGATT | + |
Preference number: 4 (lower is better) Translates to: LQALSPLRLIRAQERPLSAAAPP*TEQSWI Trigger: AATCCAACTTTGTTCAGTTCAAGGAGGAGCTGCTGC...TGAGAGGGGCCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | CTCTGTCCTCTTTTCCCTCAAAGTCCGCATGTCATCCTCAAACTTGCCGAGGTTGGAGGAAGGGGAAGGTaGGCAGGGCTTTGTTCCCTT | + |
Preference number: 4 (lower is better) Translates to: LCPLFPQSPHVILKLAEVGGRGR*AGLCSL Trigger: AAGGGAACAAAGCCCTGCTCACCTTCCCCTTCCTCC...AACCTCGGCAAGTTTGAGGATGACATGCGGACTTTGAGGGAAAAGAGGACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217980.2 |
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CDS-3UTR TCA 90 bp | CTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCCCCTCTCAGTAAACTTGACTTTCTaGGGGATGCCAGCCAAAAGG | + |
Preference number: 4 (lower is better) Translates to: LQALSPLRLIRAQERPLSVNLTF*GMPAKR Trigger: CCTTTTGGCTGGCATCCCTCAGAAAGTCAAGTTTAC...TGAGAGGGGCCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | GCTGAGGTCCTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCACTGGCCAGAAGACTaGTGGTCTGCAAGTAGTTTT | + |
Preference number: 4 (lower is better) Translates to: AEVLQALSPLRLIRAQERHWPED*WSASSF Trigger: AAAACTACTTGCAGACCAGCAGTCTTCTGGCCAGTG...CCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAGGACCTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | TGGAGCACTCTTCTCTTGAGTTGGAGTAGACCACGGCTCTGTTCTCTGCCTGACCCATTGGAAGTCTTGTaGTTGGTCAGCCACTCGGCT | + |
Preference number: 4 (lower is better) Translates to: WSTLLLSWSRPRLCSLPDPLEVL*LVSHSA Trigger: AGCCGAGTGGCTGACCAAGCACAAGACTTCCAATGG...GTCAGGCAGAGAACAGAGCCGTGGTCTACTCCAACTCAAGAGAAGAGTGCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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CDS-3UTR GCA 90 bp | GGCTCTGTTCTCTGCCTGACACAAGATGAGCATTGCTTCCACGTTGCTGAGCTGAATGGGGTGGATGTGTaGCAGGACAAACCACACAGG | + |
Preference number: 4 (lower is better) Translates to: GSVLCLTQDEHCFHVAELNGVDV*QDKPHR Trigger: CCTGTGTGGTTTGTCCTGGCACACATCCACCCCATT...CAGCTCAGCAACGTGGAAGCAATGCTCATCTTGTGTCAGGCAGAGAACAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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CDS-3UTR GCA 90 bp | AGGACACTGTTCTCTGCTGTGTCTGTAGCTAGGCAGGACTGCCAAAGTCTGGTTCTGTGTGTTCAGAGGTaGCAGCCTCAGGTCAGTAGC | + |
Preference number: 4 (lower is better) Translates to: RTLFSAVSVARQDCQSLVLCVQR*QPQVSS Trigger: GCTACTGACCTGAGGCTGGCACCTCTGAACACACAG...AACCAGACTTTGGCAGTCCTGCCTAGCTACAGACACAGCAGAGAACAGTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | CTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCCCCTCTCAACAAAGAACACGGACTaGTTGCTGTGGATAAGCTGC | + |
Preference number: 4 (lower is better) Translates to: LQALSPLRLIRAQERPLSTKNTD*LLWISC Trigger: GCAGCTTATCCACAGCAAGCAGTCCGTGTTCTTTGT...TGAGAGGGGCCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | TGGCTCTGTCCTCTTTTCCCTCAAAGTCCGCATGTCATCCTCAAACTTGCCGAGTGGGCTTGTTCTCCATaGTGTAGACCACCGGTGGCT | + |
Preference number: 4 (lower is better) Translates to: WLCPLFPQSPHVILKLAEWACSP*CRPPVA Trigger: AGCCACCGGTGGTCTACACCATGGAGAACAAGCCCA...CTCGGCAAGTTTGAGGATGACATGCGGACTTTGAGGGAAAAGAGGACAGAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217980.2 |
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CDS-3UTR CCA 90 bp | GCTTCTACAGATGGATCTTGTGATCTGCTGGGCATCCCAAGGCACAGAAGGGGTGCCTTGCAAACTGCATaGGCAGTACCACCTTGTGAC | + |
Preference number: 4 (lower is better) Translates to: ASTDGSCDLLGIPRHRRGALQTA*AVPPCD Trigger: GTCACAAGGTGGTACTGCCCATGCAGTTTGCAAGGC...ACCCCTTCTGTGCCTTGGGATGCCCAGCAGATCACAAGATCCATCTGTAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | GCTTCTACAGATGGATCTTGTGATCTGCTGGGCATCCCAAGGCACAGAAGGGGTACAGGGATGGGCATCTaGCTGCATACCGTTATCTCC | + |
Preference number: 4 (lower is better) Translates to: ASTDGSCDLLGIPRHRRGTGMGI*LHTVIS Trigger: GGAGATAACGGTATGCAGCCAGATGCCCATCCCTGT...ACCCCTTCTGTGCCTTGGGATGCCCAGCAGATCACAAGATCCATCTGTAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | CAGTGGAGCACTCTTCTCTTGAGTTGGAGTAGACCACGGCTCTGTTCTCTGCCTTGGAAGTCTTGTGCTTaGTCAGCCACTCGGCTGTCT | + |
Preference number: 4 (lower is better) Translates to: QWSTLLLSWSRPRLCSLPWKSCA*SATRLS Trigger: AGACAGCCGAGTGGCTGACCAAGCACAAGACTTCCA...AGGCAGAGAACAGAGCCGTGGTCTACTCCAACTCAAGAGAAGAGTGCTCCACTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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CDS-3UTR CCA 90 bp | GATCAGAGCACAAGAGAGGCCCCTCTCATCTTCACTCCAGATGGAGCATCTTCATCCGGAGCAGGGCAGTaGAGCACTCTTCTCTTGAGT | + |
Preference number: 4 (lower is better) Translates to: DQSTREAPLIFTPDGASSSGAGQ*STLLLS Trigger: ACTCAAGAGAAGAGTGCTCCACTGCCCTGCTCCGGA...TGAAGATGCTCCATCTGGAGTGAAGATGAGAGGGGCCTCTCTTGTGCTCTGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | GCTGAGGTCCTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGGAGGTAAATAAATTCTaGTCTCCAGCACAGGTGACG | + |
Preference number: 4 (lower is better) Translates to: AEVLQALSPLRLIRAQEREVNKF*SPAQVT Trigger: CGTCACCTGTGCTGGAGATCAGAATTTATTTACCTC...CCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAGGACCTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | GCTTCTACAGATGGATCTTGTGATCTGCTGGGCATCCCAAGGCACAGAAGGGGTAACGCAAGCTCCTCCTaGACCATGAAGTATTCGCAG | + |
Preference number: 4 (lower is better) Translates to: ASTDGSCDLLGIPRHRRGNASSS*TMKYSQ Trigger: CTGCGAATACTTCATGGTTCAGGAGGAGCTTGCGTT...ACCCCTTCTGTGCCTTGGGATGCCCAGCAGATCACAAGATCCATCTGTAGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | GCTTCTACAGATGGATCTTGTGATCTGCTGGGCATCCCAAGGCACAGAAGGGGTGAGATCCTTCAGCCTTaGAAACTGCATGGGCAGTAC | + |
Preference number: 4 (lower is better) Translates to: ASTDGSCDLLGIPRHRRGEILQP*KLHGQY Trigger: GTACTGCCCATGCAGTTTGCAAGGCTGAAGGATCTC...ACCCCTTCTGTGCCTTGGGATGCCCAGCAGATCACAAGATCCATCTGTAGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | CTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCCCCTCTCATTCCATTGGTTCTCTTaGAAGCTGCTGGGAAAGTGT | + |
Preference number: 4 (lower is better) Translates to: LQALSPLRLIRAQERPLSFHWFS*KLLGKC Trigger: ACACTTTCCCAGCAGCTTCCAAGAGAACCAATGGAA...TGAGAGGGGCCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | TCCACACCACACTTCCCTCCTCTCTGGTCTTCTCTGCAGTACCTTTCACGTGGCTACTGTACAATGGGGTaGATGTGTGCCAGGACAAAC | + |
Preference number: 4 (lower is better) Translates to: STPHFPPLWSSLQYLSRGYCTMG*MCARTN Trigger: GTTTGTCCTGGCACACATCCACCCCATTGTACAGTA...GCCACGTGAAAGGTACTGCAGAGAAGACCAGAGAGGAGGGAAGTGTGGTGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | CTCTGCCTGACACAAGATGAGCATTGCTTCCACGTTGCTGAGCTGGAGGCTGTCTACTGTACAATGGGGTaGATGTGTGCCAGGACAAAC | + |
Preference number: 4 (lower is better) Translates to: LCLTQDEHCFHVAELEAVYCTMG*MCARTN Trigger: GTTTGTCCTGGCACACATCCACCCCATTGTACAGTA...GACAGCCTCCAGCTCAGCAACGTGGAAGCAATGCTCATCTTGTGTCAGGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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CDS-3UTR CCA 90 bp | TGGAGCACTCTTCTCTTGAGTTGGAGTAGACCACGGCTCTGTTCTCTGCCTGACCGTCATACTGTACAATaGGGTGGATGTGTGCCAGGA | + |
Preference number: 4 (lower is better) Translates to: WSTLLLSWSRPRLCSLPDRHTVQ*GGCVPG Trigger: TCCTGGCACACATCCACCCCATTGTACAGTATGACG...GTCAGGCAGAGAACAGAGCCGTGGTCTACTCCAACTCAAGAGAAGAGTGCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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CDS-3UTR CCA 90 bp | GATCAGAGCACAAGAGAGGCCCCTCTCATCTTCACTCCAGATGGAGCATCTTCAACGGACTGCTTGCTGTaGATAAGCTGCTGGGACTGT | + |
Preference number: 4 (lower is better) Translates to: DQSTREAPLIFTPDGASSTDCLL*ISCWDC Trigger: ACAGTCCCAGCAGCTTATCCACAGCAAGCAGTCCGT...TGAAGATGCTCCATCTGGAGTGAAGATGAGAGGGGCCTCTCTTGTGCTCTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | GCTTCTACAGATGGATCTTGTGATCTGCTGGGCATCCCAAGGCACAGAAGGGGTAGCTCCTCCTTGAACTaGACAAAGTTGGATTCCAGG | + |
Preference number: 4 (lower is better) Translates to: ASTDGSCDLLGIPRHRRGSSSLN*TKLDSR Trigger: CCTGGAATCCAACTTTGTTCAGTTCAAGGAGGAGCT...ACCCCTTCTGTGCCTTGGGATGCCCAGCAGATCACAAGATCCATCTGTAGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | GCTTCTACAGATGGATCTTGTGATCTGCTGGGCATCCCAAGGCACAGAAGGGGTCAGTCCACAGAGCTATaGGCTTTCAGAACATTCTGC | + |
Preference number: 4 (lower is better) Translates to: ASTDGSCDLLGIPRHRRGQSTEL*AFRTFC Trigger: GCAGAATGTTCTGAAAGCTCATAGCTCTGTGGACTG...ACCCCTTCTGTGCCTTGGGATGCCCAGCAGATCACAAGATCCATCTGTAGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | AGGACACTGTTCTCTGCTGTGTCTGTAGCTAGGCAGGACTGCCAAAGTCTGGTTGCATTCCAGGATTCCTaGGTTCGAGAAGAGTCCTTC | + |
Preference number: 4 (lower is better) Translates to: RTLFSAVSVARQDCQSLVAFQDS*VREESF Trigger: GAAGGACTCTTCTCGAACTCAGGAATCCTGGAATGC...AACCAGACTTTGGCAGTCCTGCCTAGCTACAGACACAGCAGAGAACAGTGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | GATCAGAGCACAAGAGAGGCCCCTCTCATCTTCACTCCAGATGGAGCATCTTCAGCCTGTGGTGTTCAATaGGTTATCAGAGGGGCTTCT | + |
Preference number: 4 (lower is better) Translates to: DQSTREAPLIFTPDGASSACGVQ*VIRGAS Trigger: AGAAGCCCCTCTGATAACTCATTGAACACCACAGGC...TGAAGATGCTCCATCTGGAGTGAAGATGAGAGGGGCCTCTCTTGTGCTCTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | GTTGGAGTAGACCACGGCTCTGTTCTCTGCCTGACACAAGATGAGCATTGCTTCGCCTGTGGTGTTCAATaGGTTATCAGAGGGGCTTCT | + |
Preference number: 4 (lower is better) Translates to: VGVDHGSVLCLTQDEHCFACGVQ*VIRGAS Trigger: AGAAGCCCCTCTGATAACTCATTGAACACCACAGGC...GAAGCAATGCTCATCTTGTGTCAGGCAGAGAACAGAGCCGTGGTCTACTCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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CDS-3UTR GCA 90 bp | GATCAGAGCACAAGAGAGGCCCCTCTCATCTTCACTCCAGATGGAGCATCTTCAAGGGCGTCCTCAAACTaGTGCAGCATCTCAAAGACA | + |
Preference number: 4 (lower is better) Translates to: DQSTREAPLIFTPDGASSRASSN*CSISKT Trigger: TGTCTTTGAGATGCTGCAGCAGTTTGAGGACGCCCT...TGAAGATGCTCCATCTGGAGTGAAGATGAGAGGGGCCTCTCTTGTGCTCTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | CTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCCCCTCTCATTGTATACATCTCAATaGTGGCATGGGACAAGTCCA | + |
Preference number: 4 (lower is better) Translates to: LQALSPLRLIRAQERPLSLYTSQ*WHGTSP Trigger: TGGACTTGTCCCATGCCACCATTGAGATGTATACAA...TGAGAGGGGCCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | TCCACACCACACTTCCCTCCTCTCTGGTCTTCTCTGCAGTACCTTTCACGTGGCCATTTCTGCCTTCTGTaGCGACCTTTTCCTCATGTA | + |
Preference number: 4 (lower is better) Translates to: STPHFPPLWSSLQYLSRGHFCLL*RPFPHV Trigger: TACATGAGGAAAAGGTCGCCACAGAAGGCAGAAATG...GCCACGTGAAAGGTACTGCAGAGAAGACCAGAGAGGAGGGAAGTGTGGTGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | GCTGAGGTCCTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGTTTTCGATGCTGAAGTaGACATTGACAGCAATCTGG | + |
Preference number: 4 (lower is better) Translates to: AEVLQALSPLRLIRAQERFSMLK*TLTAIW Trigger: CCAGATTGCTGTCAATGTCCACTTCAGCATCGAAAA...CCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAGGACCTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | GAAGAGACCAGACCCTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGCTCCTTAAAAGCATGTaGACATTCCTACAGATAATG | + |
Preference number: 4 (lower is better) Translates to: EETRPSWEGLRSWGYQHGLLKSM*TFLQIM Trigger: CATTATCTGTAGGAATGTCCACATGCTTTTAAGGAG...CCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAGGGTCTGGTCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | TCTGTTCTCTGCCTGACACAAGATGAGCATTGCTTCCACGTTGCTGAGCTGGAGGTAAACTTGACTTTCTaGGGGATGCCAGCCAAAAGG | + |
Preference number: 4 (lower is better) Translates to: SVLCLTQDEHCFHVAELEVNLTF*GMPAKR Trigger: CCTTTTGGCTGGCATCCCTCAGAAAGTCAAGTTTAC...CTCCAGCTCAGCAACGTGGAAGCAATGCTCATCTTGTGTCAGGCAGAGAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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CDS-3UTR GCA 90 bp | GATCAGAGCACAAGAGAGGCCCCTCTCATCTTCACTCCAGATGGAGCATCTTCAGCTTTCAGAACATTCTaGCACTTGGTGAGGTCGTCT | + |
Preference number: 4 (lower is better) Translates to: DQSTREAPLIFTPDGASSAFRTF*HLVRSS Trigger: AGACGACCTCACCAAGTGGCAGAATGTTCTGAAAGC...TGAAGATGCTCCATCTGGAGTGAAGATGAGAGGGGCCTCTCTTGTGCTCTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | AGGACACTGTTCTCTGCTGTGTCTGTAGCTAGGCAGGACTGCCAAAGTCTGGTTACACAAGATGAGCATTaGTTCCACGTTGCTGAGCTG | + |
Preference number: 4 (lower is better) Translates to: RTLFSAVSVARQDCQSLVTQDEH*FHVAEL Trigger: CAGCTCAGCAACGTGGAAGCAATGCTCATCTTGTGT...AACCAGACTTTGGCAGTCCTGCCTAGCTACAGACACAGCAGAGAACAGTGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | GGAGCATCTTCAGTTCCAAGACTTAAGGTGCAAAAGATGTCGATTATACAGCTAGTGCAGAGGAGGGGGTaGCTCCTGTGTCCACGTCAG | + |
Preference number: 4 (lower is better) Translates to: GASSVPRLKVQKMSIIQLVQRRG*LLCPRQ Trigger: CTGACGTGGACACAGGAGCCACCCCCTCCTCTGCAC...TAGCTGTATAATCGACATCTTTTGCACCTTAAGTCTTGGAACTGAAGATGCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | GGAGCATCTTCAGTTCCAAGACTTAAGGTGCAAAAGATGTCGATTATACAGCTAGGAGGAAGGGGAAGGTaGGCAGGGCTTTGTTCCCTT | + |
Preference number: 4 (lower is better) Translates to: GASSVPRLKVQKMSIIQLGGRGR*AGLCSL Trigger: AAGGGAACAAAGCCCTGCTCACCTTCCCCTTCCTCC...TAGCTGTATAATCGACATCTTTTGCACCTTAAGTCTTGGAACTGAAGATGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | AGGACACTGTTCTCTGCTGTGTCTGTAGCTAGGCAGGACTGCCAAAGTCTGGTTCTGAAGATACATTTCTaGCTTCTGTGGCGACCTTTT | + |
Preference number: 4 (lower is better) Translates to: RTLFSAVSVARQDCQSLVLKIHF*LLWRPF Trigger: AAAAGGTCGCCACAGAAGGCAGAAATGTATCTTCAG...AACCAGACTTTGGCAGTCCTGCCTAGCTACAGACACAGCAGAGAACAGTGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | GATCAGAGCACAAGAGAGGCCCCTCTCATCTTCACTCCAGATGGAGCATCTTCACACACTGAATGTCAGTaGAATGACAGTGGAGTAGAT | + |
Preference number: 4 (lower is better) Translates to: DQSTREAPLIFTPDGASSHTECQ*NDSGVD Trigger: ATCTACTCCACTGTCATTGCACTGACATTCAGTGTG...TGAAGATGCTCCATCTGGAGTGAAGATGAGAGGGGCCTCTCTTGTGCTCTGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR TCA 90 bp | TCATCCTCAAACTTGCCGAGGTTTTTGGTGAAAGACATGAGCAGCAGAGTCCTGGAGGTAAATAAATTCTaGTCTCCAGCACAGGTGACG | + |
Preference number: 4 (lower is better) Translates to: SSSNLPRFLVKDMSSRVLEVNKF*SPAQVT Trigger: CGTCACCTGTGCTGGAGATCAGAATTTATTTACCTC...CAGGACTCTGCTGCTCATGTCTTTCACCAAAAACCTCGGCAAGTTTGAGGATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217980.2 |
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CDS-3UTR CCA 90 bp | TGGAGCACTCTTCTCTTGAGTTGGAGTAGACCACGGCTCTGTTCTCTGCCTGACCTCCTTAAAAGCATGTaGACATTCCTACAGATAATG | + |
Preference number: 4 (lower is better) Translates to: WSTLLLSWSRPRLCSLPDLLKSM*TFLQIM Trigger: CATTATCTGTAGGAATGTCCACATGCTTTTAAGGAG...GTCAGGCAGAGAACAGAGCCGTGGTCTACTCCAACTCAAGAGAAGAGTGCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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3UTR CAA 72 bp | CTCTTTTCCCTCAAAGTCCGCATGTCATCCTCAAACTaGCCGAGGTTTTTGGTGAAAGACATGAGCAGCAGA | + |
Preference number: 4 (lower is better) Translates to: LFSLKVRMSSSN*PRFLVKDMSSR Trigger: TCTGCTGCTCATGTCTTTCACCAAAAACCTCGGCAAGTTTGAGGATGACATGCGGACTTTGAGGGAAAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217980.2 |
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CDS-3UTR GCA 90 bp | GATCAGAGCACAAGAGAGGCCCCTCTCATCTTCACTCCAGATGGAGCATCTTCACCTCATGTAAAATTCTaGCAGATCTTTTCCAACAAG | + |
Preference number: 4 (lower is better) Translates to: DQSTREAPLIFTPDGASSPHVKF*QIFSNK Trigger: CTTGTTGGAAAAGATCTGGCAGAATTTTACATGAGG...TGAAGATGCTCCATCTGGAGTGAAGATGAGAGGGGCCTCTCTTGTGCTCTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | GGAGCATCTTCAGTTCCAAGACTTAAGGTGCAAAAGATGTCGATTATACAGCTAAATGGGGTGGATGTGTaGCAGGACAAACCACACAGG | + |
Preference number: 4 (lower is better) Translates to: GASSVPRLKVQKMSIIQLNGVDV*QDKPHR Trigger: CCTGTGTGGTTTGTCCTGGCACACATCCACCCCATT...TAGCTGTATAATCGACATCTTTTGCACCTTAAGTCTTGGAACTGAAGATGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | AAACTGCTGCAGCATCTCAAAGACAAACGCAAGCTCCTCCTGAACCATGAAGTACAGGTGAATCATTTTTaGAGCTCGGCCATAAGACCT | + |
Preference number: 4 (lower is better) Translates to: KLLQHLKDKRKLLLNHEVQVNHF*SSAIRP Trigger: AGGTCTTATGGCCGAGCTCCAAAAATGATTCACCTG...TACTTCATGGTTCAGGAGGAGCTTGCGTTTGTCTTTGAGATGCTGCAGCAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217980.2 |
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CDS-3UTR CCA 90 bp | GGAGCATCTTCAGTTCCAAGACTTAAGGTGCAAAAGATGTCGATTATACAGCTATGGAAGTCTTGTGCTTaGTCAGCCACTCGGCTGTCT | + |
Preference number: 4 (lower is better) Translates to: GASSVPRLKVQKMSIIQLWKSCA*SATRLS Trigger: AGACAGCCGAGTGGCTGACCAAGCACAAGACTTCCA...TAGCTGTATAATCGACATCTTTTGCACCTTAAGTCTTGGAACTGAAGATGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | GGAGCATCTTCAGTTCCAAGACTTAAGGTGCAAAAGATGTCGATTATACAGCTACTGCTCTTCAGAAGCTaGGGAGAACCCCACAGAGAA | + |
Preference number: 4 (lower is better) Translates to: GASSVPRLKVQKMSIIQLLLFRS*GEPHRE Trigger: TTCTCTGTGGGGTTCTCCCCAGCTTCTGAAGAGCAG...TAGCTGTATAATCGACATCTTTTGCACCTTAAGTCTTGGAACTGAAGATGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR GCA 90 bp | GGAGCATCTTCAGTTCCAAGACTTAAGGTGCAAAAGATGTCGATTATACAGCTAAGCAGAGTAGCTTCTTaGTTCTGTATCAGCTCACGC | + |
Preference number: 4 (lower is better) Translates to: GASSVPRLKVQKMSIIQLSRVAS*FCISSR Trigger: GCGTGAGCTGATACAGAAGCAAGAAGCTACTCTGCT...TAGCTGTATAATCGACATCTTTTGCACCTTAAGTCTTGGAACTGAAGATGCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | GGAGCATCTTCAGTTCCAAGACTTAAGGTGCAAAAGATGTCGATTATACAGCTATGGCCAGAAGACTGCTaGTCTGCAAGTAGTTTTCCA | + |
Preference number: 4 (lower is better) Translates to: GASSVPRLKVQKMSIIQLWPEDC*SASSFP Trigger: TGGAAAACTACTTGCAGACCAGCAGTCTTCTGGCCA...TAGCTGTATAATCGACATCTTTTGCACCTTAAGTCTTGGAACTGAAGATGCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CCA 90 bp | GGAGCATCTTCAGTTCCAAGACTTAAGGTGCAAAAGATGTCGATTATACAGCTACAGGTGAATCATTTTTaGAGCTCGGCCATAAGACCT | + |
Preference number: 4 (lower is better) Translates to: GASSVPRLKVQKMSIIQLQVNHF*SSAIRP Trigger: AGGTCTTATGGCCGAGCTCCAAAAATGATTCACCTG...TAGCTGTATAATCGACATCTTTTGCACCTTAAGTCTTGGAACTGAAGATGCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS GCA 90 bp | GGTTCTTTGGCCTGGGTCTTGAAGGCTATCTTGTTGGCGCCTGGCTaGAGGGTCACACTGCTGCACCTCAGCACGTGGGCCCCATCCTCC | + |
Preference number: 5 (lower is better) Translates to: GSLAWVLKAILLAPG*RVTLLHLSTWAPSS Trigger: GGAGGATGGGGCCCACGTGCTGAGGTGCAGCAGTGTGACCCTGCAGCCAGGCGCCAACAAGATAGCCTTCAAGACCCAGGCCAAAGAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217858.2 |
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CDS CCA 90 bp | TCCAGGTTCTTTGGCCTGGGTCTTGAAGGCTATCTTGTTGGCGCCTaGCTGCAGGGTCACACTGCTGCACCTCAGCACGTGGGCCCCATC | + |
Preference number: 5 (lower is better) Translates to: SRFFGLGLEGYLVGA*LQGHTAAPQHVGPI Trigger: GATGGGGCCCACGTGCTGAGGTGCAGCAGTGTGACCCTGCAGCCAGGCGCCAACAAGATAGCCTTCAAGACCCAGGCCAAAGAACCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217858.2 |
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CDS-3UTR CAA 90 bp | CTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGGCACAGGGCCAGGGAGCAGAGTCCTGAGTTaGGTCAGGAAGGCATTCCAG | + |
Preference number: 5 (lower is better) Translates to: LLGGSEELGIPARGTGPGSRVLS*VRKAFQ Trigger: CTGGAATGCCTTCCTGACCAAACTCAGGACTCTGCT...CCCTGGCCCTGTGCCCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | CTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGGCACAGGGCCAGGGTCTTTTCCAACAAGCTaGGCAGATCGAATCCGCCCG | + |
Preference number: 5 (lower is better) Translates to: LLGGSEELGIPARGTGPGSFPTS*ADRIRP Trigger: CGGGCGGATTCGATCTGCCAAGCTTGTTGGAAAAGA...CCCTGGCCCTGTGCCCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | CTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGGCACAGGGCCAGGGTCTTTGGCCTGGGTCTaGAAGGCTATCTTGTTGGCG | + |
Preference number: 5 (lower is better) Translates to: LLGGSEELGIPARGTGPGSLAWV*KAILLA Trigger: CGCCAACAAGATAGCCTTCAAGACCCAGGCCAAAGA...CCCTGGCCCTGTGCCCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS TCA 90 bp | CAGCCAGTTGGCACCATCCCCAGCTCCGAAGTTGACCACGTACTGTaGGAAGAGGGCATCCAGCTCGTCGTACTGTACCAGGGCGTCCTC | + |
Preference number: 5 (lower is better) Translates to: QPVGTIPSSEVDHVL*EEGIQLVVLYQGVL Trigger: GAGGACGCCCTGGTACAGTACGACGAGCTGGATGCCCTCTTCTCACAGTACGTGGTCAACTTCGGAGCTGGGGATGGTGCCAACTGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 90 bp | GAGGCCCGAAGCTGCCGCAGCGTGTATGTTCCAGGTTCTTTGGCCTaGGTCTTGAAGGCTATCTTGTTGGCGCCTGGCTGCAGGGTCACA | + |
Preference number: 5 (lower is better) Translates to: EARSCRSVYVPGSLA*VLKAILLAPGCRVT Trigger: TGTGACCCTGCAGCCAGGCGCCAACAAGATAGCCTTCAAGACCCAGGCCAAAGAACCTGGAACATACACGCTGCGGCAGCTTCGGGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217858.2 |
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CDS TCA 90 bp | ACTCGATCACGTGGTACGCAGGTGCAGTGGGAAGACCGATGCTTGTaGCCTTGTCAGAGGACTGGATCCGGAGCAGGGCAGTGGAGCACT | + |
Preference number: 5 (lower is better) Translates to: TRSRGTQVQWEDRCL*PCQRTGSGAGQWST Trigger: AGTGCTCCACTGCCCTGCTCCGGATCCAGTCCTCTGACAAGGTCACAAGCATCGGTCTTCCCACTGCACCTGCGTACCACGTGATCGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | GAAGAGACCAGACCCTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGGCTTTGTTCCCTTCTTaGGGCAGCAGCTCCTCCTTG | + |
Preference number: 5 (lower is better) Translates to: EETRPSWEGLRSWGYQHGALFPS*GSSSSL Trigger: CAAGGAGGAGCTGCTGCCCAAAGAAGGGAACAAAGC...CCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAGGGTCTGGTCTCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 90 bp | GCAGGTGCAGTGGGAAGACCGATGCTTGTGACCTTGTCAGAGGACTaGATCCGGAGCAGGGCAGTGGAGCACTCTTCTCTTGAGTTGGAG | + |
Preference number: 5 (lower is better) Translates to: AGAVGRPMLVTLSED*IRSRAVEHSSLELE Trigger: CTCCAACTCAAGAGAAGAGTGCTCCACTGCCCTGCTCCGGATCCAGTCCTCTGACAAGGTCACAAGCATCGGTCTTCCCACTGCACCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 90 bp | GTAAGTGTAGGGCTTCAAGGAAACGGTCAGCTGCTCTTCAGAAGCTaGGGAGAACCCCACAGAGAACTGGCAGTGCAGAGGAGGGGGTGG | + |
Preference number: 5 (lower is better) Translates to: VSVGLQGNGQLLFRS*GEPHRELAVQRRGW Trigger: CCACCCCCTCCTCTGCACTGCCAGTTCTCTGTGGGGTTCTCCCCAGCTTCTGAAGAGCAGCTGACCGTTTCCTTGAAGCCCTACACTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | GAAGAGACCAGACCCTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGGGAGATCCTTCAGCCTaGCAAACTGCATGGGCAGTA | + |
Preference number: 5 (lower is better) Translates to: EETRPSWEGLRSWGYQHGGDPSA*QTAWAV Trigger: TACTGCCCATGCAGTTTGCAAGGCTGAAGGATCTCC...CCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAGGGTCTGGTCTCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | CTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCCCCTCTCACCGATGCTTGTGACCTaGTCAGAGGACTGGATCCGG | + |
Preference number: 5 (lower is better) Translates to: LQALSPLRLIRAQERPLSPMLVT*SEDWIR Trigger: CCGGATCCAGTCCTCTGACAAGGTCACAAGCATCGG...TGAGAGGGGCCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 90 bp | TGGACATTGACAGCAATCTGGTCCACGTGGACAGGGATGGGCATCTaGCTGCATACCGTTATCTCCACAGTCAGGACACCACCCGCATGG | + |
Preference number: 5 (lower is better) Translates to: WTLTAIWSTWTGMGI*LHTVISTVRTPPAW Trigger: CCATGCGGGTGGTGTCCTGACTGTGGAGATAACGGTATGCAGCCAGATGCCCATCCCTGTCCACGTGGACCAGATTGCTGTCAATGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | AACCCGTTGGTGCGGTATGACTGCAACCCAGTGGCCCAGCTGAGGTCCTCCAGGATTCCATTGGTTCTCTaGGAAGCTGCTGGGAAAGTG | + |
Preference number: 5 (lower is better) Translates to: NPLVRYDCNPVAQLRSSRIPLVL*EAAGKV Trigger: CACTTTCCCAGCAGCTTCCAAGAGAACCAATGGAAT...CCTGGAGGACCTCAGCTGGGCCACTGGGTTGCAGTCATACCGCACCAACGGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | GCTGAGGTCCTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGAAGGTGAGCAGGGCTTaGTTCCCTTCTTTGGGCAGC | + |
Preference number: 5 (lower is better) Translates to: AEVLQALSPLRLIRAQERKVSRA*FPSLGS Trigger: GCTGCCCAAAGAAGGGAACAAAGCCCTGCTCACCTT...CCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAGGACCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | TCCACACCACACTTCCCTCCTCTCTGGTCTTCTCTGCAGTACCTTTCACGTGGCACCATGTGGGCAATGTaGGAGTCTATCTGGGCCCGG | + |
Preference number: 5 (lower is better) Translates to: STPHFPPLWSSLQYLSRGTMWAM*ESIWAR Trigger: CCGGGCCCAGATAGACTCCAACATTGCCCACATGGT...GCCACGTGAAAGGTACTGCAGAGAAGACCAGAGAGGAGGGAAGTGTGGTGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | GCTGAGGTCCTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGAGCATTGCTTCCACGTaGCTGAGCTGGAGGCTGTCT | + |
Preference number: 5 (lower is better) Translates to: AEVLQALSPLRLIRAQERSIAST*LSWRLS Trigger: AGACAGCCTCCAGCTCAGCAACGTGGAAGCAATGCT...CCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAGGACCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS TCA 90 bp | CGACAACTCCAGAGCGGGCAGGCTGTTCTGAGATGCAGGGAACAGTaGGGCCTCAGCTGGGAAGGTGATGATTCCATTGGAAGTCTTGTG | + |
Preference number: 5 (lower is better) Translates to: RQLQSGQAVLRCREQ*GLSWEGDDSIGSLV Trigger: CACAAGACTTCCAATGGAATCATCACCTTCCCAGCTGAGGCCTCACTGTTCCCTGCATCTCAGAACAGCCTGCCCGCTCTGGAGTTGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217858.2 |
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CDS TCA 90 bp | GTCAGAGGACTGGATCCGGAGCAGGGCAGTGGAGCACTCTTCTCTTaGGTTGGAGTAGACCACGGCTCTGTTCTCTGCCTGACACAAGAT | + |
Preference number: 5 (lower is better) Translates to: VRGLDPEQGSGALFS*VGVDHGSVLCLTQD Trigger: ATCTTGTGTCAGGCAGAGAACAGAGCCGTGGTCTACTCCAACTCAAGAGAAGAGTGCTCCACTGCCCTGCTCCGGATCCAGTCCTCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS GCA 90 bp | GTCAGCTCCCAGACAAAGAACACGGACTGCTTGCTGTGGATAAGCTaGTGGGACTGTGTGTTCAGAGGTGCCAGCCTCAGGTCAGTAGCA | + |
Preference number: 5 (lower is better) Translates to: VSSQTKNTDCLLWIS*WDCVFRGASLRSVA Trigger: TGCTACTGACCTGAGGCTGGCACCTCTGAACACACAGTCCCAGCAGCTTATCCACAGCAAGCAGTCCGTGTTCTTTGTCTGGGAGCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | TCCACACCACACTTCCCTCCTCTCTGGTCTTCTCTGCAGTACCTTTCACGTGGCACCTGGGTTGTCCTCTaGCTGGCTGGCAAAGCTAAG | + |
Preference number: 5 (lower is better) Translates to: STPHFPPLWSSLQYLSRGTWVVL*LAGKAK Trigger: CTTAGCTTTGCCAGCCAGCAAGAGGACAACCCAGGT...GCCACGTGAAAGGTACTGCAGAGAAGACCAGAGAGGAGGGAAGTGTGGTGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | CTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCCCCTCTCATGGAGCACTCTTCTCTaGAGTTGGAGTAGACCACGG | + |
Preference number: 5 (lower is better) Translates to: LQALSPLRLIRAQERPLSWSTLL*SWSRPR Trigger: CCGTGGTCTACTCCAACTCAAGAGAAGAGTGCTCCA...TGAGAGGGGCCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | AACCCGTTGGTGCGGTATGACTGCAACCCAGTGGCCCAGCTGAGGTCCTCCAGGGCCCAATTGCTGCTGTaGTCCACAACTTCATACATA | + |
Preference number: 5 (lower is better) Translates to: NPLVRYDCNPVAQLRSSRAQLLL*STTSYI Trigger: TATGTATGAAGTTGTGGACAACAGCAGCAATTGGGC...CCTGGAGGACCTCAGCTGGGCCACTGGGTTGCAGTCATACCGCACCAACGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 90 bp | GCTTTTCCATTGCATAGCTCCACAGCCCCACCATGTGGGCAATGTTaGAGTCTATCTGGGCCCGGTCACAGCAACCTTCTATCCTCTGCA | + |
Preference number: 5 (lower is better) Translates to: AFPLHSSTAPPCGQC*SLSGPGHSNLLSSA Trigger: TGCAGAGGATAGAAGGTTGCTGTGACCGGGCCCAGATAGACTCCAACATTGCCCACATGGTGGGGCTGTGGAGCTATGCAATGGAAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 90 bp | CATTGGGAGGGTCAAAATGGAGATCCTTCAGCCTTGCAAACTGCATaGGCAGTACCACCTTGTGACCTGGGTTGTCCTCTTGCTGGCTGG | + |
Preference number: 5 (lower is better) Translates to: HWEGQNGDPSALQTA*AVPPCDLGCPLAGW Trigger: CCAGCCAGCAAGAGGACAACCCAGGTCACAAGGTGGTACTGCCCATGCAGTTTGCAAGGCTGAAGGATCTCCATTTTGACCCTCCCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 90 bp | CCGTTATCTCCACAGTCAGGACACCACCCGCATGGACCACAGCATTaGGAGGGTCAAAATGGAGATCCTTCAGCCTTGCAAACTGCATGG | + |
Preference number: 5 (lower is better) Translates to: PLSPQSGHHPHGPQH*EGQNGDPSALQTAW Trigger: CCATGCAGTTTGCAAGGCTGAAGGATCTCCATTTTGACCCTCCCAATGCTGTGGTCCATGCGGGTGGTGTCCTGACTGTGGAGATAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | AACCCGTTGGTGCGGTATGACTGCAACCCAGTGGCCCAGCTGAGGTCCTCCAGGCAAGTAGTTTTCCATTaGCCCAAGGTGTTTTTGGCA | + |
Preference number: 5 (lower is better) Translates to: NPLVRYDCNPVAQLRSSRQVVFH*PKVFLA Trigger: TGCCAAAAACACCTTGGGCAAATGGAAAACTACTTG...CCTGGAGGACCTCAGCTGGGCCACTGGGTTGCAGTCATACCGCACCAACGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | CTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGCCCCTCTCAATTCCATTGGAAGTCTaGTGCTTGGTCAGCCACTCG | + |
Preference number: 5 (lower is better) Translates to: LQALSPLRLIRAQERPLSIPLEV*CLVSHS Trigger: CGAGTGGCTGACCAAGCACAAGACTTCCAATGGAAT...TGAGAGGGGCCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | TCCACACCACACTTCCCTCCTCTCTGGTCTTCTCTGCAGTACCTTTCACGTGGCAAGAACACGGACTGCTaGCTGTGGATAAGCTGCTGG | + |
Preference number: 5 (lower is better) Translates to: STPHFPPLWSSLQYLSRGKNTDC*LWISCW Trigger: CCAGCAGCTTATCCACAGCAAGCAGTCCGTGTTCTT...GCCACGTGAAAGGTACTGCAGAGAAGACCAGAGAGGAGGGAAGTGTGGTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS GCA 90 bp | ATGTTGGAGTCTATCTGGGCCCGGTCACAGCAACCTTCTATCCTCTaGAGCACCTCTAGACAGCTCAGAAAGACCCAGCAATCCAGAGCA | + |
Preference number: 5 (lower is better) Translates to: MLESIWARSQQPSIL*STSRQLRKTQQSRA Trigger: TGCTCTGGATTGCTGGGTCTTTCTGAGCTGTCTAGAGGTGCTGCAGAGGATAGAAGGTTGCTGTGACCGGGCCCAGATAGACTCCAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 90 bp | GGAGCTGAAGGTAAAGACAGAACCTCCAGCTCAAACTCGATCACGTaGTACGCAGGTGCAGTGGGAAGACCGATGCTTGTGACCTTGTCA | + |
Preference number: 5 (lower is better) Translates to: GAEGKDRTSSSNSIT*YAGAVGRPMLVTLS Trigger: TGACAAGGTCACAAGCATCGGTCTTCCCACTGCACCTGCGTACCACGTGATCGAGTTTGAGCTGGAGGTTCTGTCTTTACCTTCAGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | GAAGAGACCAGACCCTCTTGGGAGGGTCTGAGGAGTTGGGGATACCAGCACGGGATGTCATCCTCAAACTaGCCGAGGTTTTTGGTGAAA | + |
Preference number: 5 (lower is better) Translates to: EETRPSWEGLRSWGYQHGMSSSN*PRFLVK Trigger: TTTCACCAAAAACCTCGGCAAGTTTGAGGATGACAT...CCCGTGCTGGTATCCCCAACTCCTCAGACCCTCCCAAGAGGGTCTGGTCTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | CAGTGGAGCACTCTTCTCTTGAGTTGGAGTAGACCACGGCTCTGTTCTCTGCCTTCTTTGGCCTGGGTCTaGAAGGCTATCTTGTTGGCG | + |
Preference number: 5 (lower is better) Translates to: QWSTLLLSWSRPRLCSLPSLAWV*KAILLA Trigger: CGCCAACAAGATAGCCTTCAAGACCCAGGCCAAAGA...AGGCAGAGAACAGAGCCGTGGTCTACTCCAACTCAAGAGAAGAGTGCTCCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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CDS GCA 90 bp | AGACAGCAGAGAGTGCTCGGTCCTGAAGGGCACACTGAATGTCAGTaGAATGACAGTGGAGTAGATAGACCACGGGCAATCAATGGACAC | + |
Preference number: 5 (lower is better) Translates to: RQQRVLGPEGHTECQ*NDSGVDRPRAINGH Trigger: GTGTCCATTGATTGCCCGTGGTCTATCTACTCCACTGTCATTGCACTGACATTCAGTGTGCCCTTCAGGACCGAGCACTCTCTGCTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | GCTTCTACAGATGGATCTTGTGATCTGCTGGGCATCCCAAGGCACAGAAGGGGTCCAGGTGAATCATTTTaGGAGCTCGGCCATAAGACC | + |
Preference number: 5 (lower is better) Translates to: ASTDGSCDLLGIPRHRRGPGESF*ELGHKT Trigger: GGTCTTATGGCCGAGCTCCAAAAATGATTCACCTGG...ACCCCTTCTGTGCCTTGGGATGCCCAGCAGATCACAAGATCCATCTGTAGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | CACGGCTCTGTTCTCTGCCTGACACAAGATGAGCATTGCTTCCACGTTGCTGAGATTCCATTGGAAGTCTaGTGCTTGGTCAGCCACTCG | + |
Preference number: 5 (lower is better) Translates to: HGSVLCLTQDEHCFHVAEIPLEV*CLVSHS Trigger: CGAGTGGCTGACCAAGCACAAGACTTCCAATGGAAT...CTCAGCAACGTGGAAGCAATGCTCATCTTGTGTCAGGCAGAGAACAGAGCCGTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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CDS-3UTR CAA 90 bp | GCTGAGGTCCTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACAAGAGAGGAAGGTGATGATTCCATaGGAAGTCTTGTGCTTGGTC | + |
Preference number: 5 (lower is better) Translates to: AEVLQALSPLRLIRAQERKVMIP*EVLCLV Trigger: GACCAAGCACAAGACTTCCAATGGAATCATCACCTT...CCTCTCTTGTGCTCTGATCAGTCGTAAAGGACTCAGGGCCTGGAGGACCTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS TCA 90 bp | AGCAGCAGAGTCCTGAGTTTGGTCAGGAAGGCATTCCAGGATTCCTaGGTTCGAGAAGAGTCCTTCAAAGGGTCAGAGAGCACAACACAC | + |
Preference number: 5 (lower is better) Translates to: SSRVLSLVRKAFQDS*VREESFKGSESTTH Trigger: GTGTGTTGTGCTCTCTGACCCTTTGAAGGACTCTTCTCGAACTCAGGAATCCTGGAATGCCTTCCTGACCAAACTCAGGACTCTGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS GCA 90 bp | ACACAGACTTGCACATATTTTCGGGTTCCAGCAGACAGCAGAGAGTaGTCGGTCCTGAAGGGCACACTGAATGTCAGTGCAATGACAGTG | + |
Preference number: 5 (lower is better) Translates to: TQTCTYFRVPADSRE*SVLKGTLNVSAMTV Trigger: CACTGTCATTGCACTGACATTCAGTGTGCCCTTCAGGACCGAGCACTCTCTGCTGTCTGCTGGAACCCGAAAATATGTGCAAGTCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS GCA 90 bp | TCTGACAGCTCAAAGTCCAGTTCTGACAGGTTCTGGACACAGACTTaGACATATTTTCGGGTTCCAGCAGACAGCAGAGAGTGCTCGGTC | + |
Preference number: 5 (lower is better) Translates to: SDSSKSSSDRFWTQT*TYFRVPADSRECSV Trigger: GACCGAGCACTCTCTGCTGTCTGCTGGAACCCGAAAATATGTGCAAGTCTGTGTCCAGAACCTGTCAGAACTGGACTTTGAGCTGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 90 bp | TCCGCTCCTCCTCTGTCAGGTGATGATCACTGGCCAGAAGACTGCTaGTCTGCAAGTAGTTTTCCATTTGCCCAAGGTGTTTTTGGCACT | + |
Preference number: 5 (lower is better) Translates to: SAPPLSGDDHWPEDC*SASSFPFAQGVFGT Trigger: AGTGCCAAAAACACCTTGGGCAAATGGAAAACTACTTGCAGACCAGCAGTCTTCTGGCCAGTGATCATCACCTGACAGAGGAGGAGCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 90 bp | CCTGGCAGAAGTATTTCCGCTCCTCCTCTGTCAGGTGATGATCACTaGCCAGAAGACTGCTGGTCTGCAAGTAGTTTTCCATTTGCCCAA | + |
Preference number: 5 (lower is better) Translates to: PGRSISAPPLSGDDH*PEDCWSASSFPFAQ Trigger: TTGGGCAAATGGAAAACTACTTGCAGACCAGCAGTCTTCTGGCCAGTGATCATCACCTGACAGAGGAGGAGCGGAAATACTTCTGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | CTGCAGCATCTCAAAGACAAACGCAAGCTCCTCCTGAACCATGAAGTATTCGCAAAGGTGAGCAGGGCTTaGTTCCCTTCTTTGGGCAGC | + |
Preference number: 5 (lower is better) Translates to: LQHLKDKRKLLLNHEVFAKVSRA*FPSLGS Trigger: GCTGCCCAAAGAAGGGAACAAAGCCCTGCTCACCTT...TGCGAATACTTCATGGTTCAGGAGGAGCTTGCGTTTGTCTTTGAGATGCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217980.2 |
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CDS-3UTR CAA 90 bp | GCTTCTACAGATGGATCTTGTGATCTGCTGGGCATCCCAAGGCACAGAAGGGGTAGAACATTCTGCCACTaGGTGAGGTCGTCTTTTACC | + |
Preference number: 5 (lower is better) Translates to: ASTDGSCDLLGIPRHRRGRTFCH*VRSSFT Trigger: GGTAAAAGACGACCTCACCAAGTGGCAGAATGTTCT...ACCCCTTCTGTGCCTTGGGATGCCCAGCAGATCACAAGATCCATCTGTAGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | GATCAGAGCACAAGAGAGGCCCCTCTCATCTTCACTCCAGATGGAGCATCTTCACAGCAGAGTAGCTTCTaGCTTCTGTATCAGCTCACG | + |
Preference number: 5 (lower is better) Translates to: DQSTREAPLIFTPDGASSQQSSF*LLYQLT Trigger: CGTGAGCTGATACAGAAGCAAGAAGCTACTCTGCTG...TGAAGATGCTCCATCTGGAGTGAAGATGAGAGGGGCCTCTCTTGTGCTCTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 90 bp | GCTTGGCAGATCGAATCCGCCCGATACTTGTATACATCTCAATGGTaGCATGGGACAAGTCCAGGTAGTGCTTTTCAAAGGCCTCTACTG | + |
Preference number: 5 (lower is better) Translates to: AWQIESARYLYTSQW*HGTSPGSAFQRPLL Trigger: CAGTAGAGGCCTTTGAAAAGCACTACCTGGACTTGTCCCATGCCACCATTGAGATGTATACAAGTATCGGGCGGATTCGATCTGCCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | AGGACACTGTTCTCTGCTGTGTCTGTAGCTAGGCAGGACTGCCAAAGTCTGGTTAACTTGCCGAGGTTTTaGGTGAAAGACATGAGCAGC | + |
Preference number: 5 (lower is better) Translates to: RTLFSAVSVARQDCQSLVNLPRF*VKDMSS Trigger: GCTGCTCATGTCTTTCACCAAAAACCTCGGCAAGTT...AACCAGACTTTGGCAGTCCTGCCTAGCTACAGACACAGCAGAGAACAGTGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | AGGACACTGTTCTCTGCTGTGTCTGTAGCTAGGCAGGACTGCCAAAGTCTGGTTACTTTAGCTTTTCCATaGCATAGCTCCACAGCCCCA | + |
Preference number: 5 (lower is better) Translates to: RTLFSAVSVARQDCQSLVTLAFP*HSSTAP Trigger: TGGGGCTGTGGAGCTATGCAATGGAAAAGCTAAAGT...AACCAGACTTTGGCAGTCCTGCCTAGCTACAGACACAGCAGAGAACAGTGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | TCTGTCCTCTTTTCCCTCAAAGTCCGCATGTCATCCTCAAACTTGCCGAGGTTTCCAGGTGAATCATTTTaGGAGCTCGGCCATAAGACC | + |
Preference number: 5 (lower is better) Translates to: SVLFSLKVRMSSSNLPRFPGESF*ELGHKT Trigger: GGTCTTATGGCCGAGCTCCAAAAATGATTCACCTGG...AAACCTCGGCAAGTTTGAGGATGACATGCGGACTTTGAGGGAAAAGAGGACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217980.2 |
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CDS-3UTR CAA 90 bp | GCTTCTACAGATGGATCTTGTGATCTGCTGGGCATCCCAAGGCACAGAAGGGGTTTGAGATCTTCTGAGTaGGGCCCTTTTTCTGATACA | + |
Preference number: 5 (lower is better) Translates to: ASTDGSCDLLGIPRHRRGLRSSE*GPFSDT Trigger: TGTATCAGAAAAAGGGCCCAACTCAGAAGATCTCAA...ACCCCTTCTGTGCCTTGGGATGCCCAGCAGATCACAAGATCCATCTGTAGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | GTTGGAGTAGACCACGGCTCTGTTCTCTGCCTGACACAAGATGAGCATTGCTTCAAGGTGATGATTCCATaGGAAGTCTTGTGCTTGGTC | + |
Preference number: 5 (lower is better) Translates to: VGVDHGSVLCLTQDEHCFKVMIP*EVLCLV Trigger: GACCAAGCACAAGACTTCCAATGGAATCATCACCTT...GAAGCAATGCTCATCTTGTGTCAGGCAGAGAACAGAGCCGTGGTCTACTCCAAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217858.2 |
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CDS-3UTR CAA 90 bp | GATCAGAGCACAAGAGAGGCCCCTCTCATCTTCACTCCAGATGGAGCATCTTCATCTTTTACCGTAGCTTaGTACACTTCAGTATCGCAG | + |
Preference number: 5 (lower is better) Translates to: DQSTREAPLIFTPDGASSSFTVA*YTSVSQ Trigger: CTGCGATACTGAAGTGTACAAAGCTACGGTAAAAGA...TGAAGATGCTCCATCTGGAGTGAAGATGAGAGGGGCCTCTCTTGTGCTCTGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS TCA 90 bp | CAGGTCTCTCGGCTCCTAGTCCTGCCAAAAGATCAACTGTTCTGTTaGGATCTTCTGAGTTGGGCCCTTTTTCTGATACAAGTCCACATA | + |
Preference number: 5 (lower is better) Translates to: QVSRLLVLPKDQLFC*DLLSWALFLIQVHI Trigger: TATGTGGACTTGTATCAGAAAAAGGGCCCAACTCAGAAGATCTCAACAGAACAGTTGATCTTTTGGCAGGACTAGGAGCCGAGAGACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 90 bp | GTGAATCATTTTTGGAGCTCGGCCATAAGACCTTCTCCATTCCATTaGTTCTCTTGGAAGCTGCTGGGAAAGTGTCGGATAAATGGAGGT | + |
Preference number: 5 (lower is better) Translates to: VNHFWSSAIRPSPFH*FSWKLLGKCRINGG Trigger: ACCTCCATTTATCCGACACTTTCCCAGCAGCTTCCAAGAGAACCAATGGAATGGAGAAGGTCTTATGGCCGAGCTCCAAAAATGATTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217980.2 |
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CDS-3UTR CAA 90 bp | CTCAAAGTCCGCATGTCATCCTCAAACTTGCCGAGGTTTTTGGTGAAAGACATGATTCCATTGGTTCTCTaGGAAGCTGCTGGGAAAGTG | + |
Preference number: 5 (lower is better) Translates to: LKVRMSSSNLPRFLVKDMIPLVL*EAAGKV Trigger: CACTTTCCCAGCAGCTTCCAAGAGAACCAATGGAAT...CATGTCTTTCACCAAAAACCTCGGCAAGTTTGAGGATGACATGCGGACTTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217980.2 |
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CDS-3UTR CAA 90 bp | GGAGCATCTTCAGTTCCAAGACTTAAGGTGCAAAAGATGTCGATTATACAGCTAGCATGGACCACAGCATaGGGAGGGTCAAAATGGAGA | + |
Preference number: 5 (lower is better) Translates to: GASSVPRLKVQKMSIIQLAWTTA*GGSKWR Trigger: TCTCCATTTTGACCCTCCCAATGCTGTGGTCCATGC...TAGCTGTATAATCGACATCTTTTGCACCTTAAGTCTTGGAACTGAAGATGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS-3UTR CAA 90 bp | GGAGCATCTTCAGTTCCAAGACTTAAGGTGCAAAAGATGTCGATTATACAGCTACCACACACAGCCCAATaGCTGCTGTTGTCCACAACT | + |
Preference number: 5 (lower is better) Translates to: GASSVPRLKVQKMSIIQLPHTAQ*LLLSTT Trigger: AGTTGTGGACAACAGCAGCAATTGGGCTGTGTGTGG...TAGCTGTATAATCGACATCTTTTGCACCTTAAGTCTTGGAACTGAAGATGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS TCA 90 bp | TTGGCATCATTTTCAACTACCACTATTAGCCAGTCCACAGAGCTATaGGCTTTCAGAACATTCTGCCACTTGGTGAGGTCGTCTTTTACC | + |
Preference number: 5 (lower is better) Translates to: LASFSTTTISQSTEL*AFRTFCHLVRSSFT Trigger: GGTAAAAGACGACCTCACCAAGTGGCAGAATGTTCTGAAAGCTCATAGCTCTGTGGACTGGCTAATAGTGGTAGTTGAAAATGATGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS TCA 72 bp | TCCTGCACACAGCTATGCAGCAGCTCCAGGGCGCGCTaGGCCACCTCCCAGGGCCGCTGTAGGAAGAGGAGC | + |
Preference number: 6 (lower is better) Translates to: SCTQLCSSSRAR*ATSQGRCRKRS Trigger: GCTCCTCTTCCTACAGCGGCCCTGGGAGGTGGCTCAGCGCGCCCTGGAGCTGCTGCATAGCTGTGTGCAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS GCA 72 bp | CTATCTTGTTGGCGCCTGGCTGCAGGGTCACACTGCTaGACCTCAGCACGTGGGCCCCATCCTCCAGGGCCA | + |
Preference number: 6 (lower is better) Translates to: LSCWRLAAGSHC*TSARGPHPPGP Trigger: TGGCCCTGGAGGATGGGGCCCACGTGCTGAGGTGCAGCAGTGTGACCCTGCAGCCAGGCGCCAACAAGATAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217858.2 |
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CDS GCA 72 bp | AGGCTATCTTGTTGGCGCCTGGCTGCAGGGTCACACTaGTGCACCTCAGCACGTGGGCCCCATCCTCCAGGG | + |
Preference number: 6 (lower is better) Translates to: RLSCWRLAAGSH*CTSARGPHPPG Trigger: CCCTGGAGGATGGGGCCCACGTGCTGAGGTGCAGCAGTGTGACCCTGCAGCCAGGCGCCAACAAGATAGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217858.2 |
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CDS GCA 72 bp | GCCTGGGTCTTGAAGGCTATCTTGTTGGCGCCTGGCTaGAGGGTCACACTGCTGCACCTCAGCACGTGGGCC | + |
Preference number: 6 (lower is better) Translates to: AWVLKAILLAPG*RVTLLHLSTWA Trigger: GGCCCACGTGCTGAGGTGCAGCAGTGTGACCCTGCAGCCAGGCGCCAACAAGATAGCCTTCAAGACCCAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217858.2 |
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CDS TCA 72 bp | GTGGATGTGTGCCAGGACAAACCACACAGGGCCCACTaGGGCCCGAAGCTGCCGCAGCGTGTATGTTCCAGG | + |
Preference number: 6 (lower is better) Translates to: VDVCQDKPHRAH*GPKLPQRVCSR Trigger: CCTGGAACATACACGCTGCGGCAGCTTCGGGCCTCAGTGGGCCCTGTGTGGTTTGTCCTGGCACACATCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217858.2 |
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CDS CAA 90 bp | CCCACTGAGGCCCGAAGCTGCCGCAGCGTGTATGTTCCAGGTTCTTaGGCCTGGGTCTTGAAGGCTATCTTGTTGGCGCCTGGCTGCAGG | + |
Preference number: 6 (lower is better) Translates to: PTEARSCRSVYVPGS*AWVLKAILLAPGCR Trigger: CCTGCAGCCAGGCGCCAACAAGATAGCCTTCAAGACCCAGGCCAAAGAACCTGGAACATACACGCTGCGGCAGCTTCGGGCCTCAGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217858.2 |
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CDS CCA 72 bp | TTTGGCCTGGGTCTTGAAGGCTATCTTGTTGGCGCCTaGCTGCAGGGTCACACTGCTGCACCTCAGCACGTG | + |
Preference number: 6 (lower is better) Translates to: FGLGLEGYLVGA*LQGHTAAPQHV Trigger: CACGTGCTGAGGTGCAGCAGTGTGACCCTGCAGCCAGGCGCCAACAAGATAGCCTTCAAGACCCAGGCCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217858.2 |
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CDS CCA 72 bp | AGCTCTCTGAGAATCCTTCTGCTTCCTGTGGAGCTCTaGTGTCCCCGGAACACTGGTGTCCCCGCCAGATGC | + |
Preference number: 6 (lower is better) Translates to: SSLRILLLPVEL*CPRNTGVPARC Trigger: GCATCTGGCGGGGACACCAGTGTTCCGGGGACACCAGAGCTCCACAGGAAGCAGAAGGATTCTCAGAGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CAA 72 bp | TACGCAGGTGCAGTGGGAAGACCGATGCTTGTGACCTaGTCAGAGGACTGGATCCGGAGCAGGGCAGTGGAG | + |
Preference number: 6 (lower is better) Translates to: YAGAVGRPMLVT*SEDWIRSRAVE Trigger: CTCCACTGCCCTGCTCCGGATCCAGTCCTCTGACAAGGTCACAAGCATCGGTCTTCCCACTGCACCTGCGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CAA 90 bp | CGAAGCTGCCGCAGCGTGTATGTTCCAGGTTCTTTGGCCTGGGTCTaGAAGGCTATCTTGTTGGCGCCTGGCTGCAGGGTCACACTGCTG | + |
Preference number: 6 (lower is better) Translates to: RSCRSVYVPGSLAWV*KAILLAPGCRVTLL Trigger: CAGCAGTGTGACCCTGCAGCCAGGCGCCAACAAGATAGCCTTCAAGACCCAGGCCAAAGAACCTGGAACATACACGCTGCGGCAGCTTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217858.2 |
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CDS CAA 90 bp | GTGTATGTTCCAGGTTCTTTGGCCTGGGTCTTGAAGGCTATCTTGTaGGCGCCTGGCTGCAGGGTCACACTGCTGCACCTCAGCACGTGG | + |
Preference number: 6 (lower is better) Translates to: VYVPGSLAWVLKAIL*APGCRVTLLHLSTW Trigger: CCACGTGCTGAGGTGCAGCAGTGTGACCCTGCAGCCAGGCGCCAACAAGATAGCCTTCAAGACCCAGGCCAAAGAACCTGGAACATACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217858.2 |
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CDS CAA 90 bp | AGCGTGTATGTTCCAGGTTCTTTGGCCTGGGTCTTGAAGGCTATCTaGTTGGCGCCTGGCTGCAGGGTCACACTGCTGCACCTCAGCACG | + |
Preference number: 6 (lower is better) Translates to: SVYVPGSLAWVLKAI*LAPGCRVTLLHLST Trigger: CGTGCTGAGGTGCAGCAGTGTGACCCTGCAGCCAGGCGCCAACAAGATAGCCTTCAAGACCCAGGCCAAAGAACCTGGAACATACACGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217858.2 |
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CDS CAA 90 bp | ATCACGTGGTACGCAGGTGCAGTGGGAAGACCGATGCTTGTGACCTaGTCAGAGGACTGGATCCGGAGCAGGGCAGTGGAGCACTCTTCT | + |
Preference number: 6 (lower is better) Translates to: ITWYAGAVGRPMLVT*SEDWIRSRAVEHSS Trigger: AGAAGAGTGCTCCACTGCCCTGCTCCGGATCCAGTCCTCTGACAAGGTCACAAGCATCGGTCTTCCCACTGCACCTGCGTACCACGTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CAA 90 bp | GGCTCCTGTGTCCACGTCAGCTCCCAGACAAAGAACACGGACTGCTaGCTGTGGATAAGCTGCTGGGACTGTGTGTTCAGAGGTGCCAGC | + |
Preference number: 6 (lower is better) Translates to: GSCVHVSSQTKNTDC*LWISCWDCVFRGAS Trigger: GCTGGCACCTCTGAACACACAGTCCCAGCAGCTTATCCACAGCAAGCAGTCCGTGTTCTTTGTCTGGGAGCTGACGTGGACACAGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS TCA 72 bp | AACATCTCCGACAACTCCAGAGCGGGCAGGCTGTTCTaGGATGCAGGGAACAGTGAGGCCTCAGCTGGGAAG | + |
Preference number: 6 (lower is better) Translates to: NISDNSRAGRLF*DAGNSEASAGK Trigger: CTTCCCAGCTGAGGCCTCACTGTTCCCTGCATCTCAGAACAGCCTGCCCGCTCTGGAGTTGTCGGAGATGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217858.2 |
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CDS TCA 72 bp | CTGGATCCGGAGCAGGGCAGTGGAGCACTCTTCTCTTaGGTTGGAGTAGACCACGGCTCTGTTCTCTGCCTG | + |
Preference number: 6 (lower is better) Translates to: LDPEQGSGALFS*VGVDHGSVLCL Trigger: CAGGCAGAGAACAGAGCCGTGGTCTACTCCAACTCAAGAGAAGAGTGCTCCACTGCCCTGCTCCGGATCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 72 bp | AGCTGCCGCAGCGTGTATGTTCCAGGTTCTTTGGCCTaGGTCTTGAAGGCTATCTTGTTGGCGCCTGGCTGC | + |
Preference number: 6 (lower is better) Translates to: SCRSVYVPGSLA*VLKAILLAPGC Trigger: GCAGCCAGGCGCCAACAAGATAGCCTTCAAGACCCAGGCCAAAGAACCTGGAACATACACGCTGCGGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217858.2 |
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CDS CCA 72 bp | GGGCTTCAAGGAAACGGTCAGCTGCTCTTCAGAAGCTaGGGAGAACCCCACAGAGAACTGGCAGTGCAGAGG | + |
Preference number: 6 (lower is better) Translates to: GLQGNGQLLFRS*GEPHRELAVQR Trigger: CCTCTGCACTGCCAGTTCTCTGTGGGGTTCTCCCCAGCTTCTGAAGAGCAGCTGACCGTTTCCTTGAAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS TCA 72 bp | AAGTCAGCCAGTTGGCACCATCCCCAGCTCCGAAGTTaGCCACGTACTGTGAGAAGAGGGCATCCAGCTCGT | + |
Preference number: 6 (lower is better) Translates to: KSASWHHPQLRS*PRTVRRGHPAR Trigger: ACGAGCTGGATGCCCTCTTCTCACAGTACGTGGTCAACTTCGGAGCTGGGGATGGTGCCAACTGGCTGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS TCA 72 bp | GCAGCGTGTATGTTCCAGGTTCTTTGGCCTGGGTCTTaGAGGCTATCTTGTTGGCGCCTGGCTGCAGGGTCA | + |
Preference number: 6 (lower is better) Translates to: AACMFQVLWPGS*RLSCWRLAAGS Trigger: TGACCCTGCAGCCAGGCGCCAACAAGATAGCCTTCAAGACCCAGGCCAAAGAACCTGGAACATACACGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217858.2 |
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CDS GCA 72 bp | TCCATTTGCCCAAGGTGTTTTTGGCACTCTGCTAGCTaGTTCCTTGTGTGTGTGACAGGCAGGGCCCAGCCC | + |
Preference number: 6 (lower is better) Translates to: SICPRCFWHSAS*FLVCVTGRAQP Trigger: GGGCTGGGCCCTGCCTGTCACACACACAAGGAAGCAGCTAGCAGAGTGCCAAAAACACCTTGGGCAAATGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CAA 72 bp | ACTGGATCCGGAGCAGGGCAGTGGAGCACTCTTCTCTaGAGTTGGAGTAGACCACGGCTCTGTTCTCTGCCT | + |
Preference number: 6 (lower is better) Translates to: TGSGAGQWSTLL*SWSRPRLCSLP Trigger: AGGCAGAGAACAGAGCCGTGGTCTACTCCAACTCAAGAGAAGAGTGCTCCACTGCCCTGCTCCGGATCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CAA 90 bp | TGTCAGAGGACTGGATCCGGAGCAGGGCAGTGGAGCACTCTTCTCTaGAGTTGGAGTAGACCACGGCTCTGTTCTCTGCCTGACACAAGA | + |
Preference number: 6 (lower is better) Translates to: CQRTGSGAGQWSTLL*SWSRPRLCSLPDTR Trigger: TCTTGTGTCAGGCAGAGAACAGAGCCGTGGTCTACTCCAACTCAAGAGAAGAGTGCTCCACTGCCCTGCTCCGGATCCAGTCCTCTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS GCA 72 bp | CAGACAAAGAACACGGACTGCTTGCTGTGGATAAGCTaGTGGGACTGTGTGTTCAGAGGTGCCAGCCTCAGG | + |
Preference number: 6 (lower is better) Translates to: QTKNTDCLLWIS*WDCVFRGASLR Trigger: CCTGAGGCTGGCACCTCTGAACACACAGTCCCAGCAGCTTATCCACAGCAAGCAGTCCGTGTTCTTTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 72 bp | TTGCATAGCTCCACAGCCCCACCATGTGGGCAATGTTaGAGTCTATCTGGGCCCGGTCACAGCAACCTTCTA | + |
Preference number: 6 (lower is better) Translates to: LHSSTAPPCGQC*SLSGPGHSNLL Trigger: TAGAAGGTTGCTGTGACCGGGCCCAGATAGACTCCAACATTGCCCACATGGTGGGGCTGTGGAGCTATGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 72 bp | CCACAGTCAGGACACCACCCGCATGGACCACAGCATTaGGAGGGTCAAAATGGAGATCCTTCAGCCTTGCAA | + |
Preference number: 6 (lower is better) Translates to: PQSGHHPHGPQH*EGQNGDPSALQ Trigger: TTGCAAGGCTGAAGGATCTCCATTTTGACCCTCCCAATGCTGTGGTCCATGCGGGTGGTGTCCTGACTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 72 bp | ACAGCAATCTGGTCCACGTGGACAGGGATGGGCATCTaGCTGCATACCGTTATCTCCACAGTCAGGACACCA | + |
Preference number: 6 (lower is better) Translates to: TAIWSTWTGMGI*LHTVISTVRTP Trigger: TGGTGTCCTGACTGTGGAGATAACGGTATGCAGCCAGATGCCCATCCCTGTCCACGTGGACCAGATTGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 72 bp | GTCAGCTCCCAGACAAAGAACACGGACTGCTTGCTGTaGATAAGCTGCTGGGACTGTGTGTTCAGAGGTGCC | + |
Preference number: 6 (lower is better) Translates to: VSSQTKNTDCLL*ISCWDCVFRGA Trigger: GGCACCTCTGAACACACAGTCCCAGCAGCTTATCCACAGCAAGCAGTCCGTGTTCTTTGTCTGGGAGCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CAA 72 bp | CATGGGCAGTACCACCTTGTGACCTGGGTTGTCCTCTaGCTGGCTGGCAAAGCTAAGGATCTCCTGGCAGAA | + |
Preference number: 6 (lower is better) Translates to: HGQYHLVTWVVL*LAGKAKDLLAE Trigger: TTCTGCCAGGAGATCCTTAGCTTTGCCAGCCAGCAAGAGGACAACCCAGGTCACAAGGTGGTACTGCCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CAA 72 bp | TCCACAGTCAGGACACCACCCGCATGGACCACAGCATaGGGAGGGTCAAAATGGAGATCCTTCAGCCTTGCA | + |
Preference number: 6 (lower is better) Translates to: STVRTPPAWTTA*GGSKWRSFSLA Trigger: TGCAAGGCTGAAGGATCTCCATTTTGACCCTCCCAATGCTGTGGTCCATGCGGGTGGTGTCCTGACTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS TCA 72 bp | GGAGCAGAGCGAGCCTGTCTTACAGTACTCAGCTCCTaGAGCAGGAAGGATCTCAGCTCTCACACTGTACAG | + |
Preference number: 6 (lower is better) Translates to: GAERACLTVLSS*SRKDLSSHTVQ Trigger: CTGTACAGTGTGAGAGCTGAGATCCTTCCTGCTTCAGGAGCTGAGTACTGTAAGACAGGCTCGCTCTGCTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS GCA 72 bp | TCTATCTGGGCCCGGTCACAGCAACCTTCTATCCTCTaGAGCACCTCTAGACAGCTCAGAAAGACCCAGCAA | + |
Preference number: 6 (lower is better) Translates to: SIWARSQQPSIL*STSRQLRKTQQ Trigger: TTGCTGGGTCTTTCTGAGCTGTCTAGAGGTGCTGCAGAGGATAGAAGGTTGCTGTGACCGGGCCCAGATAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS GCA 72 bp | TGTGTCCACGTCAGCTCCCAGACAAAGAACACGGACTaGTTGCTGTGGATAAGCTGCTGGGACTGTGTGTTC | + |
Preference number: 6 (lower is better) Translates to: CVHVSSQTKNTD*LLWISCWDCVF Trigger: GAACACACAGTCCCAGCAGCTTATCCACAGCAAGCAGTCCGTGTTCTTTGTCTGGGAGCTGACGTGGACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 72 bp | ACAAAGAACACGGACTGCTTGCTGTGGATAAGCTGCTaGGACTGTGTGTTCAGAGGTGCCAGCCTCAGGTCA | + |
Preference number: 6 (lower is better) Translates to: TKNTDCLLWISC*DCVFRGASLRS Trigger: TGACCTGAGGCTGGCACCTCTGAACACACAGTCCCAGCAGCTTATCCACAGCAAGCAGTCCGTGTTCTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CAA 90 bp | CTGGCGGGAGAACAAGTAGCTTCGCAGGTCCAGCAGAGTAGCTTCTaGCTTCTGTATCAGCTCACGCTTCTCCATGTCTATAGGCTTGCG | + |
Preference number: 6 (lower is better) Translates to: LAGEQVASQVQQSSF*LLYQLTLLHVYRLA Trigger: CGCAAGCCTATAGACATGGAGAAGCGTGAGCTGATACAGAAGCAAGAAGCTACTCTGCTGGACCTGCGAAGCTACTTGTTCTCCCGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CAA 90 bp | TGCAAACTGCATGGGCAGTACCACCTTGTGACCTGGGTTGTCCTCTaGCTGGCTGGCAAAGCTAAGGATCTCCTGGCAGAAGTATTTCCG | + |
Preference number: 6 (lower is better) Translates to: CKLHGQYHLVTWVVL*LAGKAKDLLAEVFP Trigger: CGGAAATACTTCTGCCAGGAGATCCTTAGCTTTGCCAGCCAGCAAGAGGACAACCCAGGTCACAAGGTGGTACTGCCCATGCAGTTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CAA 90 bp | ACCGTTATCTCCACAGTCAGGACACCACCCGCATGGACCACAGCATaGGGAGGGTCAAAATGGAGATCCTTCAGCCTTGCAAACTGCATG | + |
Preference number: 6 (lower is better) Translates to: TVISTVRTPPAWTTA*GGSKWRSFSLANCM Trigger: CATGCAGTTTGCAAGGCTGAAGGATCTCCATTTTGACCCTCCCAATGCTGTGGTCCATGCGGGTGGTGTCCTGACTGTGGAGATAACGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS GCA 72 bp | AGCATTGGGAGGGTCAAAATGGAGATCCTTCAGCCTTaGAAACTGCATGGGCAGTACCACCTTGTGACCTGG | + |
Preference number: 6 (lower is better) Translates to: SIGRVKMEILQP*KLHGQYHLVTW Trigger: CCAGGTCACAAGGTGGTACTGCCCATGCAGTTTGCAAGGCTGAAGGATCTCCATTTTGACCCTCCCAATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS GCA 72 bp | AGAGTGCTCGGTCCTGAAGGGCACACTGAATGTCAGTaGAATGACAGTGGAGTAGATAGACCACGGGCAATC | + |
Preference number: 6 (lower is better) Translates to: RVLGPEGHTECQ*NDSGVDRPRAI Trigger: GATTGCCCGTGGTCTATCTACTCCACTGTCATTGCACTGACATTCAGTGTGCCCTTCAGGACCGAGCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS GCA 72 bp | TGCACATATTTTCGGGTTCCAGCAGACAGCAGAGAGTaGTCGGTCCTGAAGGGCACACTGAATGTCAGTGCA | + |
Preference number: 6 (lower is better) Translates to: CTYFRVPADSRE*SVLKGTLNVSA Trigger: TGCACTGACATTCAGTGTGCCCTTCAGGACCGAGCACTCTCTGCTGTCTGCTGGAACCCGAAAATATGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS TCA 72 bp | GTCCTGAGTTTGGTCAGGAAGGCATTCCAGGATTCCTaGGTTCGAGAAGAGTCCTTCAAAGGGTCAGAGAGC | + |
Preference number: 6 (lower is better) Translates to: VLSLVRKAFQDS*VREESFKGSES Trigger: GCTCTCTGACCCTTTGAAGGACTCTTCTCGAACTCAGGAATCCTGGAATGCCTTCCTGACCAAACTCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS TCA 72 bp | TGTGTGTTCAGAGGTGCCAGCCTCAGGTCAGTAGCATaGCCCTTGTCTTCCAGATTACTGTCTGACAGCTCA | + |
Preference number: 6 (lower is better) Translates to: CVFRGASLRSVA*PLSSRLLSDSS Trigger: TGAGCTGTCAGACAGTAATCTGGAAGACAAGGGTCATGCTACTGACCTGAGGCTGGCACCTCTGAACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS GCA 72 bp | CCTCCTCTGTCAGGTGATGATCACTGGCCAGAAGACTaGTGGTCTGCAAGTAGTTTTCCATTTGCCCAAGGT | + |
Preference number: 6 (lower is better) Translates to: PPLSGDDHWPED*WSASSFPFAQG Trigger: ACCTTGGGCAAATGGAAAACTACTTGCAGACCAGCAGTCTTCTGGCCAGTGATCATCACCTGACAGAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 72 bp | GGTCAAAATGGAGATCCTTCAGCCTTGCAAACTGCATaGGCAGTACCACCTTGTGACCTGGGTTGTCCTCTT | + |
Preference number: 6 (lower is better) Translates to: GQNGDPSALQTA*AVPPCDLGCPL Trigger: AAGAGGACAACCCAGGTCACAAGGTGGTACTGCCCATGCAGTTTGCAAGGCTGAAGGATCTCCATTTTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CAA 72 bp | CTCGGCCATAAGACCTTCTCCATTCCATTGGTTCTCTaGGAAGCTGCTGGGAAAGTGTCGGATAAATGGAGG | + |
Preference number: 6 (lower is better) Translates to: LGHKTFSIPLVL*EAAGKVSDKWR Trigger: CCTCCATTTATCCGACACTTTCCCAGCAGCTTCCAAGAGAACCAATGGAATGGAGAAGGTCTTATGGCCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217980.2 |
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CDS GCA 72 bp | TCAAAGTCCAGTTCTGACAGGTTCTGGACACAGACTTaGACATATTTTCGGGTTCCAGCAGACAGCAGAGAG | + |
Preference number: 6 (lower is better) Translates to: SKSSSDRFWTQT*TYFRVPADSRE Trigger: CTCTCTGCTGTCTGCTGGAACCCGAAAATATGTGCAAGTCTGTGTCCAGAACCTGTCAGAACTGGACTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS GCA 72 bp | AAGTTTTGTGGAAAAATAGTCCTCAGATTCCACGAGTaGTTCATCCTTGTCCACATCCAGGAGGTCGGCGAG | + |
Preference number: 6 (lower is better) Translates to: KFCGKIVLRFHE*FILVHIQEVGE Trigger: CTCGCCGACCTCCTGGATGTGGACAAGGATGAAGCACTCGTGGAATCTGAGGACTATTTTTCCACAAAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 72 bp | TCGGCCATAAGACCTTCTCCATTCCATTGGTTCTCTTaGAAGCTGCTGGGAAAGTGTCGGATAAATGGAGGT | + |
Preference number: 6 (lower is better) Translates to: SAIRPSPFHWFS*KLLGKCRINGG Trigger: ACCTCCATTTATCCGACACTTTCCCAGCAGCTTCCAAGAGAACCAATGGAATGGAGAAGGTCTTATGGCCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217980.2 |
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CDS CCA 72 bp | CTGTCTGACAGCTCAAAGTCCAGTTCTGACAGGTTCTaGACACAGACTTGCACATATTTTCGGGTTCCAGCA | + |
Preference number: 6 (lower is better) Translates to: LSDSSKSSSDRF*TQTCTYFRVPA Trigger: TGCTGGAACCCGAAAATATGTGCAAGTCTGTGTCCAGAACCTGTCAGAACTGGACTTTGAGCTGTCAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CAA 72 bp | GAACAAGTAGCTTCGCAGGTCCAGCAGAGTAGCTTCTaGCTTCTGTATCAGCTCACGCTTCTCCATGTCTAT | + |
Preference number: 6 (lower is better) Translates to: EQVASQVQQSSF*LLYQLTLLHVY Trigger: ATAGACATGGAGAAGCGTGAGCTGATACAGAAGCAAGAAGCTACTCTGCTGGACCTGCGAAGCTACTTGTTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CAA 72 bp | TTCCAACAAGCTTGGCAGATCGAATCCGCCCGATACTaGTATACATCTCAATGGTGGCATGGGACAAGTCCA | + |
Preference number: 6 (lower is better) Translates to: FQQAWQIESARY*YTSQWWHGTSP Trigger: TGGACTTGTCCCATGCCACCATTGAGATGTATACAAGTATCGGGCGGATTCGATCTGCCAAGCTTGTTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CAA 90 bp | GGTGAATCATTTTTGGAGCTCGGCCATAAGACCTTCTCCATTCCATaGGTTCTCTTGGAAGCTGCTGGGAAAGTGTCGGATAAATGGAGG | + |
Preference number: 6 (lower is better) Translates to: GESFLELGHKTFSIP*VLLEAAGKVSDKWR Trigger: CCTCCATTTATCCGACACTTTCCCAGCAGCTTCCAAGAGAACCAATGGAATGGAGAAGGTCTTATGGCCGAGCTCCAAAAATGATTCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217980.2 |
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CDS CAA 90 bp | TCAGGTCTCTCGGCTCCTAGTCCTGCCAAAAGATCAACTGTTCTGTaGAGATCTTCTGAGTTGGGCCCTTTTTCTGATACAAGTCCACAT | + |
Preference number: 6 (lower is better) Translates to: SGLSAPSPAKRSTVL*RSSELGPFSDTSPH Trigger: ATGTGGACTTGTATCAGAAAAAGGGCCCAACTCAGAAGATCTCAACAGAACAGTTGATCTTTTGGCAGGACTAGGAGCCGAGAGACCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS TCA 72 bp | GGGCTTTGTTCCCTTCTTTGGGCAGCAGCTCCTCCTTaGACTGAACAAAGTTGGATTCCAGGTGAATCATTT | + |
Preference number: 6 (lower is better) Translates to: GLCSLLWAAAPP*TEQSWIPGESF Trigger: AAATGATTCACCTGGAATCCAACTTTGTTCAGTTCAAGGAGGAGCTGCTGCCCAAAGAAGGGAACAAAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217980.2 |
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CDS TCA 72 bp | GTGGACATTCCTACAGATAATGCCTGTGGTGTTCAATaGGTTATCAGAGGGGCTTCTCTCCAACATCTCCGA | + |
Preference number: 6 (lower is better) Translates to: VDIPTDNACGVQ*VIRGASLQHLR Trigger: TCGGAGATGTTGGAGAGAAGCCCCTCTGATAACTCATTGAACACCACAGGCATTATCTGTAGGAATGTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217858.2 |
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CDS CAA 90 bp | CCTAGTCCTGCCAAAAGATCAACTGTTCTGTTGAGATCTTCTGAGTaGGGCCCTTTTTCTGATACAAGTCCACATAGGTACCCTAAGGAC | + |
Preference number: 6 (lower is better) Translates to: PSPAKRSTVLLRSSE*GPFSDTSPHRYPKD Trigger: GTCCTTAGGGTACCTATGTGGACTTGTATCAGAAAAAGGGCCCAACTCAGAAGATCTCAACAGAACAGTTGATCTTTTGGCAGGACTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS TCA 72 bp | TTTTCAACTACCACTATTAGCCAGTCCACAGAGCTATaGGCTTTCAGAACATTCTGCCACTTGGTGAGGTCG | + |
Preference number: 6 (lower is better) Translates to: FSTTTISQSTEL*AFRTFCHLVRS Trigger: CGACCTCACCAAGTGGCAGAATGTTCTGAAAGCTCATAGCTCTGTGGACTGGCTAATAGTGGTAGTTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS TCA 72 bp | CGGCTCCTAGTCCTGCCAAAAGATCAACTGTTCTGTTaGGATCTTCTGAGTTGGGCCCTTTTTCTGATACAA | + |
Preference number: 6 (lower is better) Translates to: RLLVLPKDQLFC*DLLSWALFLIQ Trigger: TTGTATCAGAAAAAGGGCCCAACTCAGAAGATCTCAACAGAACAGTTGATCTTTTGGCAGGACTAGGAGCCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000384.8 |
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CDS CCA 72 bp | GAACTGAACAAAGTTGGATTCCAGGTGAATCATTTTTaGAGCTCGGCCATAAGACCTTCTCCATTCCATTGG | + |
Preference number: 6 (lower is better) Translates to: ELNKVGFQVNHF*SSAIRPSPFHW Trigger: CCAATGGAATGGAGAAGGTCTTATGGCCGAGCTCCAAAAATGATTCACCTGGAATCCAACTTTGTTCAGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000384.8 ENSMUST00000217980.2 |