Pregenerated sensors for TRAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005981Ensembl transcript IDs: ENSMUST00000006137.9, ENSMUST00000150354.3
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATTTCACCCGAGAAGACCTaGGTTGACACTAAATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: AVGGTVCVLSPASPGRSISPEKT*VDTKSS Trigger: ACTGGATTTAGTGTCAACCCAGGTCTTCTCGGGTGA...AATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| 3UTR-3UTR CAA 90 bp | AGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATCCGAGAAGACCTGGGTaGACACTAAATCCAGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: SSWWHCLCIKSCLPRQVHPRRPG*TLNPVS Trigger: AGACACTGGATTTAGTGTCAACCCAGGTCTTCTCGG...ATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| 3UTR GCA 72 bp | TCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTaGCTCCCCAGGCAGGTCCATTATCACCCGAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: SSSWWHCLCIKS*LPRQVHYHPRR Trigger: TCTTCTCGGGTGATAATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | GCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGCCAGCACGGTCACCATaGCAGGGTGGGTGTCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: AQAVGGTVCVLSPASPGRPARSP*QGGCLG Trigger: GCCTAGACACCCACCCTGCCATGGTGACCGTGCTGG...CCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | AGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATGGTAAGCTGGTCAGCTaGCCAGCAGGCAGGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SSWWHCLCIKSCLPRQVHGKLVS*PAGRAE Trigger: CTCAGCCCTGCCTGCTGGGCAGCTGACCAGCTTACC...ATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | GCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATTCTTGCGGCTATACAGTaGCACGCTGGAGCCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AVGGTVCVLSPASPGRSILAAIQ*HAGAQL Trigger: GAGCTGGGCTCCAGCGTGGCACTGTATAGCCGCAAG...AATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR TCA 90 bp | GCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGCAGCCTTGGTCTGGATaGGGACCTTGCGGCTATACA | + |
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Preference number: 4 (lower is better) Translates to: AQAVGGTVCVLSPASPGRQPWSG*GPCGYT Trigger: TGTATAGCCGCAAGGTCCTCATCCAGACCAAGGCTG...CCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | CTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGGTCTCTGCCTGGTTCTaGAGTGCTTCCAGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSSSSWWHCLCIKSCLPRVSAWF*SASRKA Trigger: GGCCTTCCTGGAAGCACTGCAGAACCAGGCAGAGAC...CCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | AGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGATGAGCGCACTCTCCTaGAGGAGCTCTCTGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSWWHCLCIKSCLPRQMSALS*RSSLLR Trigger: CCTCAGCAGAGAGCTCCTGCAGGAGAGTGCGCTCAT...CTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | CAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCTCTGCAGCCTTGGTCTaGATGAGGACCTTGCGGCTA | + |
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Preference number: 4 (lower is better) Translates to: QAVGGTVCVLSPASPGRSSAALV*MRTLRL Trigger: TAGCCGCAAGGTCCTCATCCAGACCAAGGCTGCAGA...GGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | AGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATGTCACCATGGCAGGGTaGGTGTCTAGGCGGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSWWHCLCIKSCLPRQVHVTMAG*VSRRKV Trigger: GACTTTCCGCCTAGACACCCACCCTGCCATGGTGAC...ATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | AGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATGTTCCTCCTGGGTCTTaGCCAGCTGCTGCATACGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSWWHCLCIKSCLPRQVHVPPGS*PAAAYA Trigger: TGCGTATGCAGCAGCTGGCCAAGACCCAGGAGGAAC...ATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR TCA 90 bp | CAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCCACTCCAGAACCATCTaGAAGCCACTGGTAACCTGG | + |
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Preference number: 4 (lower is better) Translates to: QAVGGTVCVLSPASPGRSHSRTI*KPLVTW Trigger: CCAGGTTACCAGTGGCTTTCAGATGGTTCTGGAGTG...GGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR TCA 90 bp | AGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGAGATGCTGCGGATGTTaGGTGGTGCGTCCGTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: SSSSWWHCLCIKSCLPRQRCCGC*VVRPSC Trigger: ACAAGACGGACGCACCACTCAACATCCGCAGCATCT...CTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | CAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCTTGCTGATGATGGAGTaGAGGCTCTCCTCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QAVGGTVCVLSPASPGRSLLMME*RLSSSL Trigger: CAAGGAGGAGGAGAGCCTGCACTCCATCATCAGCAA...GGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | ACACTCCAGAACCATCTGAAAGCCACTGGTAACCTGGGCTCTCTGGAGCTGCTGTTGCTGATGATGGAGTaGAGGCTCTCCTCCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: TLQNHLKATGNLGSLELLLLMME*RLSSSL Trigger: CAAGGAGGAGGAGAGCCTGCACTCCATCATCAGCAA...CAGCAGCTCCAGAGAGCCCAGGTTACCAGTGGCTTTCAGATGGTTCTGGAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150354.3 |
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| CDS-3UTR GCA 90 bp | GCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGGACAGAACCCCGCACTaGCTCAGTGTTGCTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: AQAVGGTVCVLSPASPGRDRTPH*LSVADD Trigger: ATCATCAGCAACACTGAGGCAGTGCGGGGTTCTGTC...CCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | CAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCTGGAGCCCAGCTCCCTaGTCACATCAAACATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QAVGGTVCVLSPASPGRSWSPAP*SHQTWM Trigger: CATCCATGTTTGATGTGAGCAGGGAGCTGGGCTCCA...GGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | GCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATTAATAGATGTTGCGGGTaGCAGCCTGCATTCGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVGGTVCVLSPASPGRSINRCCG*QPAFGW Trigger: CCAGCCGAATGCAGGCTGGCACCCGCAACATCTATT...AATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | AGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATTGCATACGCAAGAAATaGCGAGCAGCCCCCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSWWHCLCIKSCLPRQVHCIRKK*RAAPIS Trigger: GGAGATGGGGGCTGCTCGGCATTTCTTGCGTATGCA...ATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | GCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGGTCTTGGCCAGCTGCTaGATACGCAAGAAATGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: AQAVGGTVCVLSPASPGRVLASC*IRKKCR Trigger: TCGGCATTTCTTGCGTATGCAGCAGCTGGCCAAGAC...CCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | GCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGCCTGGAACTCATGTTTaGAGACAGAACCCCGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: AQAVGGTVCVLSPASPGRPGTHV*RQNPAL Trigger: CAGTGCGGGGTTCTGTCTCCAAACATGAGTTCCAGG...CCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | CTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCATAGTCTGGTAAGCTaGTCAGCTGCCCAGCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: LSSSSWWHCLCIKSCLPRHSLVS*SAAQQA Trigger: TGCCTGCTGGGCAGCTGACCAGCTTACCAGACTATG...CCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR TCA 90 bp | CAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCGCTCTCTGGAGCTGCTaGTCGAGAATAGACTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: QAVGGTVCVLSPASPGRSALWSC*SRIDFN Trigger: GTTGAAGTCTATTCTCGATCAGCAGCTCCAGAGAGC...GGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR TCA 90 bp | GCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATTGTTTCTCCAGGACCTTaGCCAAAAGGTCGTTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: AVGGTVCVLSPASPGRSIVSPGP*PKGRSG Trigger: GCCTGAACGACCTTTTGGTCAAGGTCCTGGAGAAAC...AATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | AACCATCTGAAAGCCACTGGTAACCTGGGCTCTCTGGAGCTGCTGATCGAGAATCCTCGGCTGCCTGTGTaGTGTATAACTGTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: NHLKATGNLGSLELLIENPRLPV*CITVLQ Trigger: CTGCAGGACAGTTATACAGCACACAGGCAGCCGAGG...ATTCTCGATCAGCAGCTCCAGAGAGCCCAGGTTACCAGTGGCTTTCAGATGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150354.3 |
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| CDS-3UTR GCA 90 bp | CTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCCGATCTGGCAATTGTaGCAAGGTTGGACACCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LSSSSWWHCLCIKSCLPRPIWQL*QGWTPA Trigger: AGCTGGTGTCCAACCTTGGCACAATTGCCAGATCGG...CCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | AGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATGCGGATGTTGAGTGGTaGGTCCGTCTTGTAGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: SSWWHCLCIKSCLPRQVHADVEW*VRLVVQ Trigger: TTGCACTACAAGACGGACGCACCACTCAACATCCGC...ATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | GCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCAAACTCCCTCAGGTaGAGCAGAGTAAGCTCATCG | + |
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Preference number: 4 (lower is better) Translates to: AQAVGGTVCVLSPASPGRSNSLR*SRVSSS Trigger: CGATGAGCTTACTCTGCTGCACCTGAGGGAGTTTGA...CCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | AGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGCAATTGTGCCAAGGTTaGACACCAGCTCCTCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SSSSWWHCLCIKSCLPRQQLCQG*TPAPPV Trigger: CACAGGAGGAGCTGGTGTCCAACCTTGGCACAATTG...CTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | AGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGCCTTTGACCCCGATCTaGCAATTGTGCCAAGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SSSSWWHCLCIKSCLPRQPLTPI*QLCQGW Trigger: CCAACCTTGGCACAATTGCCAGATCGGGGTCAAAGG...CTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | AGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGTGTCTTGCTCTGCAGTaGTCACAATGCCCTCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SSSSWWHCLCIKSCLPRQCLALQ*SQCPPS Trigger: TGAGGGAGGGCATTGTGACCACTGCAGAGCAAGACA...CTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | GCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCGCTCTCCCTCAGCTaGCAGAGCTTCTTTATCAGT | + |
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Preference number: 4 (lower is better) Translates to: AQAVGGTVCVLSPASPGRSLSLS*QSFFIS Trigger: ACTGATAAAGAAGCTCTGCCAGCTGAGGGAGAGCGA...CCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR TCA 90 bp | GCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATTCTCCAAACTGACCAATaGTCTTGCTGCTGGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: AVGGTVCVLSPASPGRSILQTDQ*SCCWSL Trigger: CAGAGACCAGCAGCAAGATCATTGGTCAGTTTGGAG...AATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR TCA 90 bp | GCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGAAACCCACTCCAAACTaGCCAATGATCTTGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: AQAVGGTVCVLSPASPGRKPTPN*PMILLL Trigger: CAGCAGCAAGATCATTGGTCAGTTTGGAGTGGGTTT...CCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR TCA 90 bp | ATAAAGCTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCACCACACCTCGAATaGAGCGCAGCCACTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: IKLSSSSWWHCLCIKSCLPPHLE*SAATWA Trigger: TGCCCAAGTGGCTGCGCTTCATTCGAGGTGTGGTGG...GAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAGCTTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | AGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGCTTGATGTCTTGCTCTaGAGTGGTCACAATGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SSSSWWHCLCIKSCLPRQLDVLL*SGHNAL Trigger: GAGGGCATTGTGACCACTGCAGAGCAAGACATCAAG...CTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | CTGAAAGCCACTGGTAACCTGGGCTCTCTGGAGCTGCTGATCGAGAATAGACTTGCCTGGTTTCATGTTTaGAGACAGAACCCCGCACTG | + |
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Preference number: 4 (lower is better) Translates to: LKATGNLGSLELLIENRLAWFHV*RQNPAL Trigger: CAGTGCGGGGTTCTGTCTCCAAACATGAAACCAGGC...AAGTCTATTCTCGATCAGCAGCTCCAGAGAGCCCAGGTTACCAGTGGCTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150354.3 |
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| CDS-3UTR TCA 90 bp | AGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATGAACACCTCTTTTTCTaGGTACAGAGAACGGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: SSWWHCLCIKSCLPRQVHEHLFF*VQRTGY Trigger: GTAGCCCGTTCTCTGTACTCAGAAAAAGAGGTGTTC...ATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR TCA 90 bp | CTGAAAGCCACTGGTAACCTGGGCTCTCTGGAGCTGCTGATCGAGAATAGACTTCTCCAAACTGACCAATaGTCTTGCTGCTGGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LKATGNLGSLELLIENRLLQTDQ*SCCWSL Trigger: CAGAGACCAGCAGCAAGATCATTGGTCAGTTTGGAG...AAGTCTATTCTCGATCAGCAGCTCCAGAGAGCCCAGGTTACCAGTGGCTTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150354.3 |
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| CDS-3UTR TCA 90 bp | CAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCAGCTACCATGAAGGCTaGATAGAAACCCACTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: QAVGGTVCVLSPASPGRSSYHEG*IETHSK Trigger: TTTGGAGTGGGTTTCTATTCAGCCTTCATGGTAGCT...GGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR TCA 90 bp | AGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATCCTTGTCAGCTACCATaGAGGCTGAATAGAAACCCA | + |
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Preference number: 4 (lower is better) Translates to: SSWWHCLCIKSCLPRQVHPCQLP*RLNRNP Trigger: TGGGTTTCTATTCAGCCTTCATGGTAGCTGACAAGG...ATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR TCA 90 bp | CAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCCATGCTGAAATTCACTaGTGTCCTTTGGGTCCATCA | + |
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Preference number: 4 (lower is better) Translates to: QAVGGTVCVLSPASPGRSHAEIH*CPLGPS Trigger: TGATGGACCCAAAGGACATCAGTGAATTTCAGCATG...GGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR TCA 90 bp | AGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGTTGCAATATCCTCCTTaGTGTCTTGCTCTGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SSSSWWHCLCIKSCLPRQLQYPP*CLALQW Trigger: CCACTGCAGAGCAAGACATCAAGGAGGATATTGCAA...CTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | AGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATGGATGGTTTCATCTCTaGCACATAGAAGATGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: SSWWHCLCIKSCLPRQVHGWFHL*HIEDAA Trigger: CGCAGCATCTTCTATGTGCCAGAGATGAAACCATCC...ATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | ATAAAGCTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCTATACAGTGCCACGCTaGAGCCCAGCTCCCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IKLSSSSWWHCLCIKSCLYTVPR*SPAPCS Trigger: TGAGCAGGGAGCTGGGCTCCAGCGTGGCACTGTATA...GAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAGCTTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR TCA 90 bp | CTGAAAGCCACTGGTAACCTGGGCTCTCTGGAGCTGCTGATCGAGAATAGACTTAAACCCACTCCAAACTaGCCAATGATCTTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKATGNLGSLELLIENRLKPTPN*PMILLL Trigger: CAGCAGCAAGATCATTGGTCAGTTTGGAGTGGGTTT...AAGTCTATTCTCGATCAGCAGCTCCAGAGAGCCCAGGTTACCAGTGGCTTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150354.3 |
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| CDS-3UTR GCA 90 bp | ATAAAGCTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCTCGGCTGCCTGTGTaGTGTATAACTGTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IKLSSSSWWHCLCIKSCLPRLPV*CITVLQ Trigger: CTGCAGGACAGTTATACAGCACACAGGCAGCCGAGG...GAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAGCTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | ATAAAGCTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCTTGCTGCTGGTCTCTaGCTGGTTCTGCAGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IKLSSSSWWHCLCIKSCLLAAGL*LVLQCF Trigger: GAAGCACTGCAGAACCAGGCAGAGACCAGCAGCAAG...GAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAGCTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | GCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGATCATCCAGATGGCCTaGAAAGTGTTAATCCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AQAVGGTVCVLSPASPGRIIQMA*KVLIRF Trigger: AAAGCGGATTAACACTTTGCAGGCCATCTGGATGAT...CCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | ATAAAGCTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCTTGGGCAGGATGTCTaGAGCCTTGGTCTGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: IKLSSSSWWHCLCIKSCLLGQDV*SLGLDE Trigger: CTCATCCAGACCAAGGCTGCAGACATCCTGCCCAAG...GAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAGCTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | AGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGTTCTTTATCAGTGTGTaGCTGGGGTTGATCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSWWHCLCIKSCLPRQFFISV*LGLISS Trigger: ACTGGAGATCAACCCCAGGCACACACTGATAAAGAA...CTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | AAAGCCACTGGTAACCTGGGCTCTCTGGAGCTGCTGATCGAGAATAGACTTCAACTTGCTGCTGGTCTCTaGCTGGTTTCATGTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KATGNLGSLELLIENRLQLAAGL*LVSCLE Trigger: CTCCAAACATGAAACCAGGCAGAGACCAGCAGCAAG...TTGAAGTCTATTCTCGATCAGCAGCTCCAGAGAGCCCAGGTTACCAGTGGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150354.3 |
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| CDS-3UTR CCA 90 bp | ATAAAGCTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCGCTGCGGATGTTGAGTaGTGCGTCCGTCTTGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IKLSSSSWWHCLCIKSCLAADVE*CVRLVV Trigger: CACTACAAGACGGACGCACCACTCAACATCCGCAGC...GAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAGCTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | GCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTGCTCACATCAAACATaGATGGTTTCATCTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQAVGGTVCVLSPASPGRCSHQT*MVSSLA Trigger: TGCCAGAGATGAAACCATCCATGTTTGATGTGAGCA...CCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR TCA 90 bp | AACCATCTGAAAGCCACTGGTAACCTGGGCTCTCTGGAGCTGCTGATCGAGAATAGCTACCATGAAGGCTaGATAGAAACCCACTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NHLKATGNLGSLELLIENSYHEG*IETHSK Trigger: TTTGGAGTGGGTTTCTATTCAGCCTTCATGGTAGCT...ATTCTCGATCAGCAGCTCCAGAGAGCCCAGGTTACCAGTGGCTTTCAGATGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150354.3 |
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| CDS-3UTR TCA 90 bp | AGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGCTGTTTCCACAGAGATaGGCTTCTTCTTGTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSWWHCLCIKSCLPRQLFPQR*ASSCQT Trigger: AGTTTGACAAGAAGAAGCTCATCTCTGTGGAAACAG...CTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | ATAAAGCTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCTGGGTCTTGGCCAGCTaGTGCATACGCAAGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: IKLSSSSWWHCLCIKSCLWVLAS*CIRKKC Trigger: GCATTTCTTGCGTATGCAGCAGCTGGCCAAGACCCA...GAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAGCTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR GCA 90 bp | CTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGATCAACGAGTCCTGCTaGTATCATGGCATTCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LSSSSWWHCLCIKSCLPRINESC*YHGILI Trigger: TATGAGAATGCCATGATAGCAGCAGGACTCGTTGAT...CCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | GCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATTTTCTTTGTCTCTGCCTaGAACTCATGTTTGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: AVGGTVCVLSPASPGRSIFFVSA*NSCLET Trigger: TGTCTCCAAACATGAGTTCCAGGCAGAGACAAAGAA...AATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | CTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGTCTGACTTGAGGTaGATGATTATTTTGGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSSSWWHCLCIKSCLPRQSDLR*MIILVP Trigger: TGGGACCAAAATAATCATCCACCTCAAGTCAGACTG...CCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | CTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGGTCCTGCTGCTATCATaGCATTCTCATAGATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSSSSWWHCLCIKSCLPRVLLLS*HSHRSD Trigger: ATCAGATCTATGAGAATGCCATGATAGCAGCAGGAC...CCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | ATAAAGCTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCTTCACTGATGTCCTTTaGGTCCATCATCCAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: IKLSSSSWWHCLCIKSCLFTDVL*VHHPDG Trigger: GCCATCTGGATGATGGACCCAAAGGACATCAGTGAA...GAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAGCTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR TCA 90 bp | ATAAAGCTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCGGTACAAGGGGAAGCTaGCAAAGTTACTGTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IKLSSSSWWHCLCIKSCLGTRGS*QSYCTL Trigger: CAAAGTACAGTAACTTTGTCAGCTTCCCCTTGTACC...GAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAGCTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR TCA 90 bp | ATAAAGCTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCAATGCCCTCCCTCATaGACAAGCCATAATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IKLSSSSWWHCLCIKSCLQCPPS*TSHNLQ Trigger: TTGAAGATTATGGCTTGTTCATGAGGGAGGGCATTG...GAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAGCTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS-3UTR GCA 90 bp | ATAAAGCTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCAAGTTTCTTTGTCTCTaGCTGGAACTCATGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IKLSSSSWWHCLCIKSCLKFLCL*LELMFG Trigger: TCCAAACATGAGTTCCAGGCAGAGACAAAGAAACTT...GAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAGCTTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CCA 90 bp | ATAAAGCTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCACATCAAACATGGATaGTTTCATCTCTGGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: IKLSSSSWWHCLCIKSCLHIKHG*FHLWHI Trigger: TATGTGCCAGAGATGAAACCATCCATGTTTGATGTG...GAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAGCTTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS GCA 90 bp | GCACGTTCCTCCTGGGTCTTGGCCAGCTGCTGCATACGCAAGAAATaGCGAGCAGCCCCCATCTCCAGCACGGTCACCATGGCAGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARSSWVLASCCIRKK*RAAPISSTVTMAGW Trigger: CCACCCTGCCATGGTGACCGTGCTGGAGATGGGGGCTGCTCGGCATTTCTTGCGTATGCAGCAGCTGGCCAAGACCCAGGAGGAACGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS GCA 90 bp | GGCTGTAGCAGTTGGGCACGTTCCTCCTGGGTCTTGGCCAGCTGCTaGATACGCAAGAAATGCCGAGCAGCCCCCATCTCCAGCACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GCSSWARSSWVLASC*IRKKCRAAPISSTV Trigger: GACCGTGCTGGAGATGGGGGCTGCTCGGCATTTCTTGCGTATGCAGCAGCTGGCCAAGACCCAGGAGGAACGTGCCCAACTGCTACAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS GCA 90 bp | GTGGGCTGTAGCAGTTGGGCACGTTCCTCCTGGGTCTTGGCCAGCTaGTGCATACGCAAGAAATGCCGAGCAGCCCCCATCTCCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: VGCSSWARSSWVLAS*CIRKKCRAAPISST Trigger: CGTGCTGGAGATGGGGGCTGCTCGGCATTTCTTGCGTATGCAGCAGCTGGCCAAGACCCAGGAGGAACGTGCCCAACTGCTACAGCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 90 bp | CGAATGAAGCGCAGCCACTTGGGCAGGATGTCTGCAGCCTTGGTCTaGATGAGGACCTTGCGGCTATACAGTGCCACGCTGGAGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RMKRSHLGRMSAALV*MRTLRLYSATLEPS Trigger: GCTGGGCTCCAGCGTGGCACTGTATAGCCGCAAGGTCCTCATCCAGACCAAGGCTGCAGACATCCTGCCCAAGTGGCTGCGCTTCATTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 90 bp | GGGCACACAGGTAATAGATGTTGCGGGTGCCAGCCTGCATTCGGCTaGCATAGTCTGGTAAGCTGGTCAGCTGCCCAGCAGGCAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GHTGNRCCGCQPAFG*HSLVSWSAAQQAGL Trigger: CAGCCCTGCCTGCTGGGCAGCTGACCAGCTTACCAGACTATGCCAGCCGAATGCAGGCTGGCACCCGCAACATCTATTACCTGTGTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 90 bp | TCTCCAGTGTGGGCTGTAGCAGTTGGGCACGTTCCTCCTGGGTCTTaGCCAGCTGCTGCATACGCAAGAAATGCCGAGCAGCCCCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SPVWAVAVGHVPPGS*PAAAYARNAEQPPS Trigger: AGATGGGGGCTGCTCGGCATTTCTTGCGTATGCAGCAGCTGGCCAAGACCCAGGAGGAACGTGCCCAACTGCTACAGCCCACACTGGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 90 bp | GGGTTGATCTCCAGTGTGGGCTGTAGCAGTTGGGCACGTTCCTCCTaGGTCTTGGCCAGCTGCTGCATACGCAAGAAATGCCGAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLISSVGCSSWARSS*VLASCCIRKKCRAA Trigger: GGCTGCTCGGCATTTCTTGCGTATGCAGCAGCTGGCCAAGACCCAGGAGGAACGTGCCCAACTGCTACAGCCCACACTGGAGATCAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS GCA 90 bp | TCCGGCTCGCTCTCCCTCAGCTGGCAGAGCTTCTTTATCAGTGTGTaGCTGGGGTTGATCTCCAGTGTGGGCTGTAGCAGTTGGGCACGT | + |
|
Preference number: 5 (lower is better) Translates to: SGSLSLSWQSFFISV*LGLISSVGCSSWAR Trigger: ACGTGCCCAACTGCTACAGCCCACACTGGAGATCAACCCCAGGCACACACTGATAAAGAAGCTCTGCCAGCTGAGGGAGAGCGAGCCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 90 bp | ATCAGTGTGTGCCTGGGGTTGATCTCCAGTGTGGGCTGTAGCAGTTaGGCACGTTCCTCCTGGGTCTTGGCCAGCTGCTGCATACGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISVCLGLISSVGCSS*ARSSWVLASCCIRK Trigger: CTTGCGTATGCAGCAGCTGGCCAAGACCCAGGAGGAACGTGCCCAACTGCTACAGCCCACACTGGAGATCAACCCCAGGCACACACTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CAA 90 bp | ACACTCCAGAACCATCTGAAAGCCACTGGTAACCTGGGCTCTCTGGAGCTGCTGAGGCTCTCCTCCTCCTaGTCCTCGGCTGCCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLQNHLKATGNLGSLELLRLSSS*SSAACV Trigger: CACACAGGCAGCCGAGGACAAGGAGGAGGAGAGCCT...CAGCAGCTCCAGAGAGCCCAGGTTACCAGTGGCTTTCAGATGGTTCTGGAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150354.3 |
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| CDS GCA 90 bp | GATGTCTGCAGCCTTGGTCTGGATGAGGACCTTGCGGCTATACAGTaGCACGCTGGAGCCCAGCTCCCTGCTCACATCAAACATGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: DVCSLGLDEDLAAIQ*HAGAQLPAHIKHGW Trigger: CCATCCATGTTTGATGTGAGCAGGGAGCTGGGCTCCAGCGTGGCACTGTATAGCCGCAAGGTCCTCATCCAGACCAAGGCTGCAGACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CAA 90 bp | CTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGAGGCTCTCCTCCTCCTaGTCCTCGGCTGCCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSSSWWHCLCIKSCLPRRLSSS*SSAACV Trigger: CACACAGGCAGCCGAGGACAAGGAGGAGGAGAGCCT...CCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CAA 90 bp | CAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATGAAGCGCAGCCACTaGGGCAGGATGTCTGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QAVGGTVCVLSPASPGRSMKRSH*GRMSAA Trigger: GGCTGCAGACATCCTGCCCAAGTGGCTGCGCTTCAT...GGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CAA 90 bp | GCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATTCGTTCCTCCTGGGTCTaGGCCAGCTGCTGCATACGC | + |
|
Preference number: 5 (lower is better) Translates to: AVGGTVCVLSPASPGRSIRSSWV*ASCCIR Trigger: GCGTATGCAGCAGCTGGCCAAGACCCAGGAGGAACG...AATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS GCA 90 bp | TCTGCAGTGCTTCCAGGAAGGCCTTTGACCCCGATCTGGCAATTGTaGCAAGGTTGGACACCAGCTCCTCCTGTGTCATCCCAATGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SAVLPGRPLTPIWQL*QGWTPAPPVSSQCQ Trigger: CTGGCATTGGGATGACACAGGAGGAGCTGGTGTCCAACCTTGGCACAATTGCCAGATCGGGGTCAAAGGCCTTCCTGGAAGCACTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CAA 90 bp | CAGAACCATCTGAAAGCCACTGGTAACCTGGGCTCTCTGGAGCTGCTGATCGAGCGCACTGCCTCAGTGTaGCTGATGATGGAGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QNHLKATGNLGSLELLIERTASV*LMMECR Trigger: CCTGCACTCCATCATCAGCAACACTGAGGCAGTGCG...CTCGATCAGCAGCTCCAGAGAGCCCAGGTTACCAGTGGCTTTCAGATGGTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150354.3 |
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| CDS GCA 90 bp | CTCTGTTGTAGAACATCCCGGAGTTTCCGGATGAGCGCACTCTCCTaGAGGAGCTCTCTGCTGAGGTTCAGGGGAATGTCCTCACTATCC | + |
|
Preference number: 5 (lower is better) Translates to: LCCRTSRSFRMSALS*RSSLLRFRGMSSLS Trigger: GGATAGTGAGGACATTCCCCTGAACCTCAGCAGAGAGCTCCTGCAGGAGAGTGCGCTCATCCGGAAACTCCGGGATGTTCTACAACAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 90 bp | CTTCCAGGAAGGCCTTTGACCCCGATCTGGCAATTGTGCCAAGGTTaGACACCAGCTCCTCCTGTGTCATCCCAATGCCAGTGTCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LPGRPLTPIWQLCQG*TPAPPVSSQCQCPE Trigger: TTCAGGACACTGGCATTGGGATGACACAGGAGGAGCTGGTGTCCAACCTTGGCACAATTGCCAGATCGGGGTCAAAGGCCTTCCTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CAA 90 bp | CTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCGCACTGCCTCAGTGTaGCTGATGATGGAGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSSSSWWHCLCIKSCLPRRTASV*LMMECR Trigger: CCTGCACTCCATCATCAGCAACACTGAGGCAGTGCG...CCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS-3UTR CAA 90 bp | GCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGCCTTCACACACCAGCTaGTGCCGCAGTTTCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: AQAVGGTVCVLSPASPGRPSHTS*CRSFSK Trigger: CTTGGAGAAACTGCGGCACAAGCTGGTGTGTGAAGG...CCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CAA 90 bp | GCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGACCCCGATCTGGCAATaGTGCCAAGGTTGGACACCA | + |
|
Preference number: 5 (lower is better) Translates to: AQAVGGTVCVLSPASPGRTPIWQ*CQGWTP Trigger: TGGTGTCCAACCTTGGCACAATTGCCAGATCGGGGT...CCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATGTCTGGATGAGGACCTaGCGGCTATACAGTGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: SSWWHCLCIKSCLPRQVHVWMRT*RLYSAT Trigger: CGTGGCACTGTATAGCCGCAAGGTCCTCATCCAGAC...ATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS-3UTR CAA 90 bp | CTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGGCAATTGTGCCAAGGTaGGACACCAGCTCCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSSSSWWHCLCIKSCLPRAIVPR*DTSSSC Trigger: ACAGGAGGAGCTGGTGTCCAACCTTGGCACAATTGC...CCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS-3UTR CAA 90 bp | GCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATTAAGATGCTGCGGATGTaGAGTGGTGCGTCCGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AVGGTVCVLSPASPGRSIKMLRM*SGASVL Trigger: CAAGACGGACGCACCACTCAACATCCGCAGCATCTT...AATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATAGGATGTCTGCAGCCTaGGTCTGGATGAGGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSWWHCLCIKSCLPRQVHRMSAA*VWMRTL Trigger: CAAGGTCCTCATCCAGACCAAGGCTGCAGACATCCT...ATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS-3UTR CAA 90 bp | GCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGGAGATGAGCTTCTTCTaGTCAAACTCCCTCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AQAVGGTVCVLSPASPGREMSFF*SNSLRC Trigger: GCACCTGAGGGAGTTTGACAAGAAGAAGCTCATCTC...CCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CAA 90 bp | GCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGAAAGTCACCTTCACATaGGTGACACGGGACCCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: AQAVGGTVCVLSPASPGRKVTFT*VTRDPS Trigger: ACTAGGGTCCCGTGTCACCAATGTGAAGGTGACTTT...CCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CAA 90 bp | CAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCTGTTTCTCCAGGACCTaGACCAAAAGGTCGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QAVGGTVCVLSPASPGRSCFSRT*TKRSFR Trigger: CCTGAACGACCTTTTGGTCAAGGTCCTGGAGAAACA...GGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS GCA 90 bp | ATAGAAACCCACTCCAAACTGACCAATGATCTTGCTGCTGGTCTCTaGCTGGTTTCATGTTTGGAGACAGAACCCCGCACTGCCTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: IETHSKLTNDLAAGL*LVSCLETEPRTASV Trigger: CACTGAGGCAGTGCGGGGTTCTGTCTCCAAACATGAAACCAGGCAGAGACCAGCAGCAAGATCATTGGTCAGTTTGGAGTGGGTTTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150354.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATATCCTCCTTGATGTCTaGCTCTGCAGTGGTCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: SSWWHCLCIKSCLPRQVHILLDV*LCSGHN Trigger: ATTGTGACCACTGCAGAGCAAGACATCAAGGAGGAT...ATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS GCA 90 bp | TGGTTTCATCTCTGGCACATAGAAGATGCTGCGGATGTTGAGTGGTaGGTCCGTCTTGTAGTGCAAAGTGAAGCGGGGCTTATCATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: WFHLWHIEDAADVEW*VRLVVQSEAGLIIS Trigger: GCTTATGATAAGCCCCGCTTCACTTTGCACTACAAGACGGACGCACCACTCAACATCCGCAGCATCTTCTATGTGCCAGAGATGAAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 90 bp | TACAGAGAACGGGCTACGATGTCCAAAAGTTTCTTTGTCTCTGCCTaGAACTCATGTTTGGAGACAGAACCCCGCACTGCCTCAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YRERATMSKSFFVSA*NSCLETEPRTASVL Trigger: CAACACTGAGGCAGTGCGGGGTTCTGTCTCCAAACATGAGTTCCAGGCAGAGACAAAGAAACTTTTGGACATCGTAGCCCGTTCTCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS-3UTR CAA 90 bp | ATAAAGCTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCTTCCAGGAAGGCCTTaGACCCCGATCTGGCAATTG | + |
|
Preference number: 5 (lower is better) Translates to: IKLSSSSWWHCLCIKSCLLPGRP*TPIWQL Trigger: CAATTGCCAGATCGGGGTCAAAGGCCTTCCTGGAAG...GAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAGCTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATAGGTGGATGATTATTTaGGTCCCAGGTCTAACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSWWHCLCIKSCLPRQVHRWMII*VPGLTP Trigger: AGGAGTTAGACCTGGGACCAAAATAATCATCCACCT...ATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CAA 90 bp | GCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATTTTTGCAATATCCTCCTaGATGTCTTGCTCTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AVGGTVCVLSPASPGRSIFAISS*MSCSAV Trigger: CACTGCAGAGCAAGACATCAAGGAGGATATTGCAAA...AATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS TCA 90 bp | GAAGAGCACCTCAGTATGTTTCTGCTTCATGGCTTCGTAATAGGGTaGATGTTCAGCCAGGTGACGGTTAGGGGCACACAGGTAATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: EEHLSMFLLHGFVIG*MFSQVTVRGTQVID Trigger: ATCTATTACCTGTGTGCCCCTAACCGTCACCTGGCTGAACATTCACCCTATTACGAAGCCATGAAGCAGAAACATACTGAGGTGCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGGTCCATCAAAGTTACTGTACTTaGTTACCACATCTTGTACCC | + |
|
Preference number: 5 (lower is better) Translates to: SSWWHCLCIKSCLPRQVHQSYCT*LPHLVP Trigger: GGGTACAAGATGTGGTAACAAAGTACAGTAACTTTG...ATGGACCTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS-3UTR CAA 90 bp | AGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCCCCAGGCAGTGGTCAATGAAGAACTaGATCAATCTCTGTTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSWWHCLCIKSCLPRQWSMKN*INLCCR Trigger: TCTACAACAGAGATTGATCAAGTTCTTCATTGACCA...CTGCCTGGGGAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS-3UTR CAA 90 bp | ATAAAGCTGAGCTCAAGCAGTTGGTGGCACTGTTTGTGTATTAAGTCCTGCCTCTGTCCAAAAGTTTCTTaGTCTCTGCCTGGAACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: IKLSSSSWWHCLCIKSCLCPKVS*SLPGTH Trigger: ATGAGTTCCAGGCAGAGACAAAGAAACTTTTGGACA...GAGGCAGGACTTAATACACAAACAGTGCCACCAACTGCTTGAGCTCAGCTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 90 bp | AATATAACGGTAGAATTCCTCATGCTGAAATTCACTGATGTCCTTTaGGTCCATCATCCAGATGGCCTGCAAAGTGTTAATCCGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NITVEFLMLKFTDVL*VHHPDGLQSVNPLS Trigger: GGAAAGCGGATTAACACTTTGCAGGCCATCTGGATGATGGACCCAAAGGACATCAGTGAATTTCAGCATGAGGAATTCTACCGTTATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS CCA 72 bp | TGCCTGGGGTTGATCTCCAGTGTGGGCTGTAGCAGTTaGGCACGTTCCTCCTGGGTCTTGGCCAGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CLGLISSVGCSS*ARSSWVLASCC Trigger: GCAGCAGCTGGCCAAGACCCAGGAGGAACGTGCCCAACTGCTACAGCCCACACTGGAGATCAACCCCAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS TCA 72 bp | GCCACTTGGGCAGGATGTCTGCAGCCTTGGTCTGGATaGGGACCTTGCGGCTATACAGTGCCACGCTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ATWAGCLQPWSG*GPCGYTVPRWS Trigger: GCTCCAGCGTGGCACTGTATAGCCGCAAGGTCCTCATCCAGACCAAGGCTGCAGACATCCTGCCCAAGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS GCA 72 bp | TCCTGGGTCTTGGCCAGCTGCTGCATACGCAAGAAATaGCGAGCAGCCCCCATCTCCAGCACGGTCACCATG | + |
|
Preference number: 6 (lower is better) Translates to: SWVLASCCIRKK*RAAPISSTVTM Trigger: CATGGTGACCGTGCTGGAGATGGGGGCTGCTCGGCATTTCTTGCGTATGCAGCAGCTGGCCAAGACCCAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS GCA 72 bp | AGTTGGGCACGTTCCTCCTGGGTCTTGGCCAGCTGCTaGATACGCAAGAAATGCCGAGCAGCCCCCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SWARSSWVLASC*IRKKCRAAPIS Trigger: GGAGATGGGGGCTGCTCGGCATTTCTTGCGTATGCAGCAGCTGGCCAAGACCCAGGAGGAACGTGCCCAACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS GCA 72 bp | AGCAGTTGGGCACGTTCCTCCTGGGTCTTGGCCAGCTaGTGCATACGCAAGAAATGCCGAGCAGCCCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SSWARSSWVLAS*CIRKKCRAAPI Trigger: GATGGGGGCTGCTCGGCATTTCTTGCGTATGCAGCAGCTGGCCAAGACCCAGGAGGAACGTGCCCAACTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS CCA 72 bp | TGCCAGCCTGCATTCGGCTGGCATAGTCTGGTAAGCTaGTCAGCTGCCCAGCAGGCAGGGCTGAGGACTCAT | + |
|
Preference number: 6 (lower is better) Translates to: CQPAFGWHSLVS*SAAQQAGLRTH Trigger: ATGAGTCCTCAGCCCTGCCTGCTGGGCAGCTGACCAGCTTACCAGACTATGCCAGCCGAATGCAGGCTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 72 bp | GCAGCCCCCATCTCCAGCACGGTCACCATGGCAGGGTaGGTGTCTAGGCGGAAAGTCACCTTCACATTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AAPISSTVTMAG*VSRRKVTFTLV Trigger: CACCAATGTGAAGGTGACTTTCCGCCTAGACACCCACCCTGCCATGGTGACCGTGCTGGAGATGGGGGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 72 bp | AATGCCGAGCAGCCCCCATCTCCAGCACGGTCACCATaGCAGGGTGGGTGTCTAGGCGGAAAGTCACCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: NAEQPPSPARSP*QGGCLGGKSPS Trigger: TGAAGGTGACTTTCCGCCTAGACACCCACCCTGCCATGGTGACCGTGCTGGAGATGGGGGCTGCTCGGCATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CAA 90 bp | ATCTCCAGTGTGGGCTGTAGCAGTTGGGCACGTTCCTCCTGGGTCTaGGCCAGCTGCTGCATACGCAAGAAATGCCGAGCAGCCCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: ISSVGCSSWARSSWV*ASCCIRKKCRAAPI Trigger: GATGGGGGCTGCTCGGCATTTCTTGCGTATGCAGCAGCTGGCCAAGACCCAGGAGGAACGTGCCCAACTGCTACAGCCCACACTGGAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 72 bp | CCTAAACTGGACTGTAGTCTTCTGAAGGTGCAGAACTaGCTTTCCTCGCCGAACTCCAGCCAGCGCGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PKLDCSLLKVQN*LSSPNSSQRGG Trigger: GCCCCCGCGCTGGCTGGAGTTCGGCGAGGAAAGCCAGTTCTGCACCTTCAGAAGACTACAGTCCAGTTTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006137.9 ENSMUST00000150354.3 |
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| CDS CCA 72 bp | TGGGCTGTAGCAGTTGGGCACGTTCCTCCTGGGTCTTaGCCAGCTGCTGCATACGCAAGAAATGCCGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WAVAVGHVPPGS*PAAAYARNAEQ Trigger: CTGCTCGGCATTTCTTGCGTATGCAGCAGCTGGCCAAGACCCAGGAGGAACGTGCCCAACTGCTACAGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CAA 72 bp | GTGGGCTGTAGCAGTTGGGCACGTTCCTCCTGGGTCTaGGCCAGCTGCTGCATACGCAAGAAATGCCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VGCSSWARSSWV*ASCCIRKKCRA Trigger: TGCTCGGCATTTCTTGCGTATGCAGCAGCTGGCCAAGACCCAGGAGGAACGTGCCCAACTGCTACAGCCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CAA 90 bp | ACACCTCGAATGAAGCGCAGCCACTTGGGCAGGATGTCTGCAGCCTaGGTCTGGATGAGGACCTTGCGGCTATACAGTGCCACGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TPRMKRSHLGRMSAA*VWMRTLRLYSATLE Trigger: CTCCAGCGTGGCACTGTATAGCCGCAAGGTCCTCATCCAGACCAAGGCTGCAGACATCCTGCCCAAGTGGCTGCGCTTCATTCGAGGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CAA 90 bp | GCCTGGAACTCATGTTTGGAGACAGAACCCCGCACTGCCTCAGTGTaGCTGATGATGGAGTGCAGGCTCTCCTCCTCCTTGTCCTCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AWNSCLETEPRTASV*LMMECRLSSSLSSA Trigger: AGCCGAGGACAAGGAGGAGGAGAGCCTGCACTCCATCATCAGCAACACTGAGGCAGTGCGGGGTTCTGTCTCCAAACATGAGTTCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS GCA 72 bp | AGCCTTGGTCTGGATGAGGACCTTGCGGCTATACAGTaGCACGCTGGAGCCCAGCTCCCTGCTCACATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SLGLDEDLAAIQ*HAGAQLPAHIK Trigger: TTTGATGTGAGCAGGGAGCTGGGCTCCAGCGTGGCACTGTATAGCCGCAAGGTCCTCATCCAGACCAAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS GCA 72 bp | AGAACATCCCGGAGTTTCCGGATGAGCGCACTCTCCTaGAGGAGCTCTCTGCTGAGGTTCAGGGGAATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RTSRSFRMSALS*RSSLLRFRGMS Trigger: GGACATTCCCCTGAACCTCAGCAGAGAGCTCCTGCAGGAGAGTGCGCTCATCCGGAAACTCCGGGATGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 72 bp | GGTAATAGATGTTGCGGGTGCCAGCCTGCATTCGGCTaGCATAGTCTGGTAAGCTGGTCAGCTGCCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GNRCCGCQPAFG*HSLVSWSAAQQ Trigger: CTGCTGGGCAGCTGACCAGCTTACCAGACTATGCCAGCCGAATGCAGGCTGGCACCCGCAACATCTATTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CAA 90 bp | TGCCTGGTTTCATGTTTGGAGACAGAACCCCGCACTGCCTCAGTGTaGCTGATGATGGAGTGCAGGCTCTCCTCCTCCTTGTCCTCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CLVSCLETEPRTASV*LMMECRLSSSLSSA Trigger: AGCCGAGGACAAGGAGGAGGAGAGCCTGCACTCCATCATCAGCAACACTGAGGCAGTGCGGGGTTCTGTCTCCAAACATGAAACCAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150354.3 |
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| CDS GCA 72 bp | CTTCCAGGAAGGCCTTTGACCCCGATCTGGCAATTGTaGCAAGGTTGGACACCAGCTCCTCCTGTGTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LPGRPLTPIWQL*QGWTPAPPVSS Trigger: GGATGACACAGGAGGAGCTGGTGTCCAACCTTGGCACAATTGCCAGATCGGGGTCAAAGGCCTTCCTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 72 bp | AGGCCTTTGACCCCGATCTGGCAATTGTGCCAAGGTTaGACACCAGCTCCTCCTGTGTCATCCCAATGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RPLTPIWQLCQG*TPAPPVSSQCQ Trigger: CTGGCATTGGGATGACACAGGAGGAGCTGGTGTCCAACCTTGGCACAATTGCCAGATCGGGGTCAAAGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 72 bp | TCTGCAGTGCTTCCAGGAAGGCCTTTGACCCCGATCTaGCAATTGTGCCAAGGTTGGACACCAGCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SAVLPGRPLTPI*QLCQGWTPAPP Trigger: AGGAGGAGCTGGTGTCCAACCTTGGCACAATTGCCAGATCGGGGTCAAAGGCCTTCCTGGAAGCACTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 72 bp | TGGCCCGGGGGTCATCAACGAGTCCTGCTGCTATCATaGCATTCTCATAGATCTGATCCACGAGCAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: WPGGHQRVLLLS*HSHRSDPRAAG Trigger: CCCAGCTGCTCGTGGATCAGATCTATGAGAATGCCATGATAGCAGCAGGACTCGTTGATGACCCCCGGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CAA 72 bp | GTGCTTCCAGGAAGGCCTTTGACCCCGATCTGGCAATaGTGCCAAGGTTGGACACCAGCTCCTCCTGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VLPGRPLTPIWQ*CQGWTPAPPVS Trigger: TGACACAGGAGGAGCTGGTGTCCAACCTTGGCACAATTGCCAGATCGGGGTCAAAGGCCTTCCTGGAAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CAA 90 bp | ACTGCCTCAGTGTTGCTGATGATGGAGTGCAGGCTCTCCTCCTCCTaGTCCTCGGCTGCCTGTGTGCTGTATAACTGTCCTGCAGAGATC | + |
|
Preference number: 6 (lower is better) Translates to: TASVLLMMECRLSSS*SSAACVLYNCPAEI Trigger: GATCTCTGCAGGACAGTTATACAGCACACAGGCAGCCGAGGACAAGGAGGAGGAGAGCCTGCACTCCATCATCAGCAACACTGAGGCAGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006137.9 ENSMUST00000150354.3 |
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| CDS TCA 72 bp | GGTGGGTGTCTAGGCGGAAAGTCACCTTCACATTGGTaGCACGGGACCCTAGTGCATTTCTCATCCACGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GGCLGGKSPSHW*HGTLVHFSSTP Trigger: TGGCGTGGATGAGAAATGCACTAGGGTCCCGTGTCACCAATGTGAAGGTGACTTTCCGCCTAGACACCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS GCA 72 bp | TGCCTGGAACTCATGTTTGGAGACAGAACCCCGCACTaGCTCAGTGTTGCTGATGATGGAGTGCAGGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: CLELMFGDRTPH*LSVADDGVQAL Trigger: GAGAGCCTGCACTCCATCATCAGCAACACTGAGGCAGTGCGGGGTTCTGTCTCCAAACATGAGTTCCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS GCA 72 bp | ATTTCTGGCAGCACCTGGCCTTCACACACCAGCTTGTaGCGCAGTTTCTCCAAGGCATCACTGGCATTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ISGSTWPSHTSL*RSFSKASLALE Trigger: CTCCAATGCCAGTGATGCCTTGGAGAAACTGCGGCACAAGCTGGTGTGTGAAGGCCAGGTGCTGCCAGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS CAA 72 bp | AAGGCCTTTGACCCCGATCTGGCAATTGTGCCAAGGTaGGACACCAGCTCCTCCTGTGTCATCCCAATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: KAFDPDLAIVPR*DTSSSCVIPMP Trigger: TGGCATTGGGATGACACAGGAGGAGCTGGTGTCCAACCTTGGCACAATTGCCAGATCGGGGTCAAAGGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS GCA 72 bp | CTCTGGCACATAGAAGATGCTGCGGATGTTGAGTGGTaGGTCCGTCTTGTAGTGCAAAGTGAAGCGGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LWHIEDAADVEW*VRLVVQSEAGL Trigger: AAGCCCCGCTTCACTTTGCACTACAAGACGGACGCACCACTCAACATCCGCAGCATCTTCTATGTGCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS CCA 72 bp | CATCTCTGGCACATAGAAGATGCTGCGGATGTTGAGTaGTGCGTCCGTCTTGTAGTGCAAAGTGAAGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: HLWHIEDAADVE*CVRLVVQSEAG Trigger: CCCCGCTTCACTTTGCACTACAAGACGGACGCACCACTCAACATCCGCAGCATCTTCTATGTGCCAGAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS CCA 72 bp | CGGGCTACGATGTCCAAAAGTTTCTTTGTCTCTGCCTaGAACTCATGTTTGGAGACAGAACCCCGCACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RATMSKSFFVSA*NSCLETEPRTA Trigger: GGCAGTGCGGGGTTCTGTCTCCAAACATGAGTTCCAGGCAGAGACAAAGAAACTTTTGGACATCGTAGCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS CAA 72 bp | AATGATCTTGCTGCTGGTCTCTGCCTGGTTTCATGTTaGGAGACAGAACCCCGCACTGCCTCAGTGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: NDLAAGLCLVSC*ETEPRTASVLL Trigger: CAGCAACACTGAGGCAGTGCGGGGTTCTGTCTCCAAACATGAAACCAGGCAGAGACCAGCAGCAAGATCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150354.3 |
||
| CDS CAA 90 bp | GGCAGGGCTGAGGACTCATACCGTAGCAGTTTTGCAATATCCTCCTaGATGTCTTGCTCTGCAGTGGTCACAATGCCCTCCCTCATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GRAEDSYRSSFAISS*MSCSAVVTMPSLMN Trigger: GTTCATGAGGGAGGGCATTGTGACCACTGCAGAGCAAGACATCAAGGAGGATATTGCAAAACTGCTACGGTATGAGTCCTCAGCCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
||
| CDS CAA 90 bp | AAACTGACCAATGATCTTGCTGCTGGTCTCTGCCTGGTTTCATGTTaGGAGACAGAACCCCGCACTGCCTCAGTGTTGCTGATGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: KLTNDLAAGLCLVSC*ETEPRTASVLLMME Trigger: CTCCATCATCAGCAACACTGAGGCAGTGCGGGGTTCTGTCTCCAAACATGAAACCAGGCAGAGACCAGCAGCAAGATCATTGGTCAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150354.3 |
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| CDS GCA 72 bp | CACTCCAAACTGACCAATGATCTTGCTGCTGGTCTCTaGCTGGTTTCATGTTTGGAGACAGAACCCCGCACT | + |
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Preference number: 6 (lower is better) Translates to: HSKLTNDLAAGL*LVSCLETEPRT Trigger: AGTGCGGGGTTCTGTCTCCAAACATGAAACCAGGCAGAGACCAGCAGCAAGATCATTGGTCAGTTTGGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150354.3 |
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| CDS CAA 90 bp | GCTACGATGTCCAAAAGTTTCTTTGTCTCTGCCTGGAACTCATGTTaGGAGACAGAACCCCGCACTGCCTCAGTGTTGCTGATGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: ATMSKSFFVSAWNSC*ETEPRTASVLLMME Trigger: CTCCATCATCAGCAACACTGAGGCAGTGCGGGGTTCTGTCTCCAAACATGAGTTCCAGGCAGAGACAAAGAAACTTTTGGACATCGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS TCA 72 bp | AGGACTCATACCGTAGCAGTTTTGCAATATCCTCCTTaGTGTCTTGCTCTGCAGTGGTCACAATGCCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RTHTVAVLQYPP*CLALQWSQCPP Trigger: GGGAGGGCATTGTGACCACTGCAGAGCAAGACATCAAGGAGGATATTGCAAAACTGCTACGGTATGAGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS TCA 72 bp | CTCAGTATGTTTCTGCTTCATGGCTTCGTAATAGGGTaGATGTTCAGCCAGGTGACGGTTAGGGGCACACAG | + |
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Preference number: 6 (lower is better) Translates to: LSMFLLHGFVIG*MFSQVTVRGTQ Trigger: CTGTGTGCCCCTAACCGTCACCTGGCTGAACATTCACCCTATTACGAAGCCATGAAGCAGAAACATACTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS GCA 72 bp | AGAACGGGCTACGATGTCCAAAAGTTTCTTTGTCTCTaGCTGGAACTCATGTTTGGAGACAGAACCCCGCAC | + |
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Preference number: 6 (lower is better) Translates to: RTGYDVQKFLCL*LELMFGDRTPH Trigger: GTGCGGGGTTCTGTCTCCAAACATGAGTTCCAGGCAGAGACAAAGAAACTTTTGGACATCGTAGCCCGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CAA 72 bp | GAGGACTCATACCGTAGCAGTTTTGCAATATCCTCCTaGATGTCTTGCTCTGCAGTGGTCACAATGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: EDSYRSSFAISS*MSCSAVVTMPS Trigger: GGAGGGCATTGTGACCACTGCAGAGCAAGACATCAAGGAGGATATTGCAAAACTGCTACGGTATGAGTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CAA 90 bp | TCACACACCAGCTTGTGCCGCAGTTTCTCCAAGGCATCACTGGCATaGGAGATGAGCTCTCGTATGAACACCTCTTTTTCTGAGTACAGA | + |
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Preference number: 6 (lower is better) Translates to: SHTSLCRSFSKASLA*EMSSRMNTSFSEYR Trigger: TCTGTACTCAGAAAAAGAGGTGTTCATACGAGAGCTCATCTCCAATGCCAGTGATGCCTTGGAGAAACTGCGGCACAAGCTGGTGTGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS GCA 72 bp | TACCGTAGCAGTTTTGCAATATCCTCCTTGATGTCTTaGTCTGCAGTGGTCACAATGCCCTCCCTCATGAAC | + |
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Preference number: 6 (lower is better) Translates to: YRSSFAISSLMS*SAVVTMPSLMN Trigger: GTTCATGAGGGAGGGCATTGTGACCACTGCAGAGCAAGACATCAAGGAGGATATTGCAAAACTGCTACGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 72 bp | ATCTTCTGTTTCCTTCTCCGAGAGGCGCTCATCAGCTaGAGATGTGTCCTCAAACTTTTCCTCCTTGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: IFCFLLREALIS*RCVLKLFLLVV Trigger: CACTACAAGGAGGAAAAGTTTGAGGACACATCTCCAGCTGATGAGCGCCTCTCGGAGAAGGAAACAGAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CAA 90 bp | ACATCTTGTACCCGGGACTCGCTGGCAAAATCTTTACAGTCTGACTaGAGGTGGATGATTATTTTGGTCCCAGGTCTAACTCCTGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: TSCTRDSLAKSLQSD*RWMIILVPGLTPEA Trigger: AGCTTCAGGAGTTAGACCTGGGACCAAAATAATCATCCACCTCAAGTCAGACTGTAAAGATTTTGCCAGCGAGTCCCGGGTACAAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS TCA 72 bp | TTGTACCCGGGACTCGCTGGCAAAATCTTTACAGTCTaGCTTGAGGTGGATGATTATTTTGGTCCCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LYPGLAGKIFTV*LEVDDYFGPRS Trigger: AGACCTGGGACCAAAATAATCATCCACCTCAAGTCAGACTGTAAAGATTTTGCCAGCGAGTCCCGGGTACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS TCA 72 bp | TGTAGTGATCAACGACGATGTCTGTTTCCACAGAGATaGGCTTCTTCTTGTCAAACTCCCTCAGGTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: CSDQRRCLFPQR*ASSCQTPSGAA Trigger: TGCTGCACCTGAGGGAGTTTGACAAGAAGAAGCTCATCTCTGTGGAAACAGACATCGTCGTTGATCACTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 72 bp | CATAGCAGAAGAGCACCTCAGTATGTTTCTGCTTCATaGCTTCGTAATAGGGTGAATGTTCAGCCAGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: HSRRAPQYVSAS*LRNRVNVQPGD Trigger: GTCACCTGGCTGAACATTCACCCTATTACGAAGCCATGAAGCAGAAACATACTGAGGTGCTCTTCTGCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS GCA 72 bp | TCACTGATGTCCTTTGGGTCCATCATCCAGATGGCCTaGAAAGTGTTAATCCGCTTTCCATTAAGGTACAAG | + |
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Preference number: 6 (lower is better) Translates to: SLMSFGSIIQMA*KVLIRFPLRYK Trigger: CTTGTACCTTAATGGAAAGCGGATTAACACTTTGCAGGCCATCTGGATGATGGACCCAAAGGACATCAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CAA 72 bp | AGTACAGAGAACGGGCTACGATGTCCAAAAGTTTCTTaGTCTCTGCCTGGAACTCATGTTTGGAGACAGAAC | + |
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Preference number: 6 (lower is better) Translates to: STENGLRCPKVS*SLPGTHVWRQN Trigger: GTTCTGTCTCCAAACATGAGTTCCAGGCAGAGACAAAGAAACTTTTGGACATCGTAGCCCGTTCTCTGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS TCA 72 bp | CAATATAACGGTAGAATTCCTCATGCTGAAATTCACTaGTGTCCTTTGGGTCCATCATCCAGATGGCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: QYNGRIPHAEIH*CPLGPSSRWPA Trigger: TGCAGGCCATCTGGATGATGGACCCAAAGGACATCAGTGAATTTCAGCATGAGGAATTCTACCGTTATATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CCA 72 bp | GACTCGCTGGCAAAATCTTTACAGTCTGACTTGAGGTaGATGATTATTTTGGTCCCAGGTCTAACTCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: DSLAKSLQSDLR*MIILVPGLTPE Trigger: TTCAGGAGTTAGACCTGGGACCAAAATAATCATCCACCTCAAGTCAGACTGTAAAGATTTTGCCAGCGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CAA 72 bp | GAAGCTGACAAAGTTACTGTACTTTGTTACCACATCTaGTACCCGGGACTCGCTGGCAAAATCTTTACAGTC | + |
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Preference number: 6 (lower is better) Translates to: EADKVTVLCYHI*YPGLAGKIFTV Trigger: GACTGTAAAGATTTTGCCAGCGAGTCCCGGGTACAAGATGTGGTAACAAAGTACAGTAACTTTGTCAGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS CAA 90 bp | TCGCTGGCAAAATCTTTACAGTCTGACTTGAGGTGGATGATTATTTaGGTCCCAGGTCTAACTCCTGAAGCTTCGGCAATTTCAAACACT | + |
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Preference number: 6 (lower is better) Translates to: SLAKSLQSDLRWMII*VPGLTPEASAISNT Trigger: AGTGTTTGAAATTGCCGAAGCTTCAGGAGTTAGACCTGGGACCAAAATAATCATCCACCTCAAGTCAGACTGTAAAGATTTTGCCAGCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS TCA 72 bp | ATTGGAGATGAGCTCTCGTATGAACACCTCTTTTTCTaGGTACAGAGAACGGGCTACGATGTCCAAAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: IGDELSYEHLFF*VQRTGYDVQKF Trigger: AAACTTTTGGACATCGTAGCCCGTTCTCTGTACTCAGAAAAAGAGGTGTTCATACGAGAGCTCATCTCCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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| CDS TCA 72 bp | AGAATAGACTTCAACCTTGTCAGCTACCATGAAGGCTaGATAGAAACCCACTCCAAACTGACCAATGATCTT | + |
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Preference number: 6 (lower is better) Translates to: RIDFNLVSYHEG*IETHSKLTNDL Trigger: AAGATCATTGGTCAGTTTGGAGTGGGTTTCTATTCAGCCTTCATGGTAGCTGACAAGGTTGAAGTCTATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006137.9 |
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