RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRANK1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000062296

Ensembl transcript IDs: ENSMUST00000078626.8, ENSMUST00000197049.2

Found 601 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCTACTCCCCTGCTACAGTGGTTATGAGCCCAGGAGCCTGGCTTaGGGCAGAGAAGTCCCAGCACTCCTTTCAACTACCTCCCACCTA +
Preference number: 1 (lower is better)
Translates to: CLLPCYSGYEPRSLA*GREVPALLSTTSHL
Trigger: TAGGTGGGAGGTAGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAGGGGAGTAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR CCA 90 bp CACTCAGACAACCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATaGCAAGGTGTACTTTGGGCACAGACAGCCTTGGCTCTGCTTGCT +
Preference number: 1 (lower is better)
Translates to: HSDNQKGEPGLRGRL*QGVLWAQTALALLA
Trigger: AGCAAGCAGAGCCAAGGCTGTCTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGGTTGTCTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR TCA 90 bp AGGCCTCATGCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTaGTCCACAGAACTATCATTAGAAGTTCCTCTGTCCATTGTACAC +
Preference number: 1 (lower is better)
Translates to: RPHAAPWQGLQATWQ*STELSLEVPLSIVH
Trigger: GTGTACAATGGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGCATGAGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR CCA 90 bp TCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACAGACAGCCTTaGCTCTGCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGA +
Preference number: 1 (lower is better)
Translates to: SGVAYGKVYFGHRQP*LCLLFYSSVPRDVG
Trigger: TCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGTCTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR GCA 90 bp TTGGGCACAGACAGCCTTGGCTCTGCTTGCTGTTTTACAGCAGTGTaGCAAGAGATGTGGGATCCACAGAGGGATTTTCTAACCTGGAGC +
Preference number: 1 (lower is better)
Translates to: LGTDSLGSACCFTAV*QEMWDPQRDFLTWS
Trigger: GCTCCAGGTTAGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGTCTGTGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR GCA 90 bp CTTATGGCAAGGTGTACTTTGGGCACAGACAGCCTTGGCTCTGCTTaGTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGG +
Preference number: 1 (lower is better)
Translates to: LMARCTLGTDSLGSA*CFTAVCQEMWDPQR
Trigger: CCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGTCTGTGCCCAAAGTACACCTTGCCATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR CCA 90 bp GTCCCAGCACTCCTTTCAACTACCTCCCACCTAACTGGACATGTGTaGTGTCTGGGGAGCAGTGTTGCTGTTAGACCTCAACTTGGAAAA +
Preference number: 1 (lower is better)
Translates to: VPALLSTTSHLTGHV*CLGSSVAVRPQLGK
Trigger: TTTTCCAAGTTGAGGTCTAACAGCAACACTGCTCCCCAGACACCACACATGTCCAGTTAGGTGGGAGGTAGTTGAAAGGAGTGCTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR GCA 90 bp GTGAGCAGAAATTCAAGCTGCCAACCTGAGCATAGGTGTGAAATGTaGCAGGGAAAACCAGGAAACACAGATGTGCAAGGCATAGGCAAG +
Preference number: 1 (lower is better)
Translates to: VSRNSSCQPEHRCEM*QGKPGNTDVQGIGK
Trigger: CTTGCCTATGCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATGCTCAGGTTGGCAGCTTGAATTTCTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR-3UTR CCA 90 bp GGGAATGCAGGCCTCATGCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTATGAGCCCAGGAGCCTaGCTTGGGGCAGAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: GNAGLMQPPGRAYRPHGSMSPGA*LGAEKS
Trigger: GGACTTCTCTGCCCCAAGCCAGGCTCCTGGGCTCAT...ACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGCATGAGGCCTGCATTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR-3UTR TCA 90 bp CAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAGACCGGCGTGAACCTGGGCTaGGTGGGGAAAGGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: QQQHGRKAGSVGGKAPETGVNLG*VGKGQA
Trigger: TGCCTGCCCTTTCCCCACTCAGCCCAGGTTCACGCC...GGTCTCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR CAA 90 bp CTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACAGACAGCCTaGGCTCTGCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGG +
Preference number: 2 (lower is better)
Translates to: LRGRLWQGVLWAQTA*ALLAVLQQCAKRCG
Trigger: CCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGTCTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR CAA 90 bp AAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTaGGGCACAGACAGCCTTGGCTCTGCTTGCTGTTTTACAGCAGTG +
Preference number: 2 (lower is better)
Translates to: KGRAWTQGSLMARCT*GTDSLGSACCFTAV
Trigger: CACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGTCTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR-3UTR GCA 90 bp AAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACAGAGCCTTGGCTCTGCTTaGTGTTTTACAGCAGTGTGC +
Preference number: 2 (lower is better)
Translates to: KGEPGLRGRLWQGVLWAQSLGSA*CFTAVC
Trigger: GCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCT...CTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR-3UTR CCA 90 bp AAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACAGGACATGTGTGGTGTCTaGGGAGCAGTGTTGCTGTTA +
Preference number: 2 (lower is better)
Translates to: KGEPGLRGRLWQGVLWAQDMCGV*GAVLLL
Trigger: TAACAGCAACACTGCTCCCCAGACACCACACATGTC...CTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR-3UTR CCA 90 bp AAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACAGCTAACTGGACATGTGTaGTGTCTGGGGAGCAGTGTT +
Preference number: 2 (lower is better)
Translates to: KGEPGLRGRLWQGVLWAQLTGHV*CLGSSV
Trigger: AACACTGCTCCCCAGACACCACACATGTCCAGTTAG...CTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR-3UTR TCA 90 bp AAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTCAGACAACCAAACTGCTACAGTGGTTATaGGCCCAGGAGCCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: KSPETTGKYTTVATQTTKLLQWL*AQEPGL
Trigger: CAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAG...TTTGGTTGTCTGAGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR-3UTR GCA 90 bp AAAGCAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGACATAGGTGTGAAATGTaGCAGGGAAAACCAGGAAAC +
Preference number: 2 (lower is better)
Translates to: KAAATWKKSWFCGRQSPRHRCEM*QGKPGN
Trigger: GTTTCCTGGTTTTCCCTGGCACATTTCACACCTATG...TCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR-3UTR TCA 90 bp CCAAGGCAAAGGCAAGACCACTTTGGAGTGTGCAGGAAATACCTTCAAATGTTCTGCTTGACTACATTCTaGGGTAGTCTAACCCTGGCT +
Preference number: 2 (lower is better)
Translates to: PRQRQDHFGVCRKYLQMFCLTTF*GSLTLA
Trigger: AGCCAGGGTTAGACTACCTCAGAATGTAGTCAAGCA...GAACATTTGAAGGTATTTCCTGCACACTCCAAAGTGGTCTTGCCTTTGCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR-3UTR GCA 90 bp CATAGGTGTGAAATGTGCCAGGGAAAACCAGGAAACACAGATGTGCAAGGCATAGACCACTTTGGAGTGTaGAGGAAATACCTTCAAATG +
Preference number: 2 (lower is better)
Translates to: HRCEMCQGKPGNTDVQGIDHFGV*RKYLQM
Trigger: CATTTGAAGGTATTTCCTGCACACTCCAAAGTGGTC...TATGCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR-3UTR CCA 90 bp TTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTAACCTGAAGTTTAACAGAGGATaGAATGGTCTGAAGGTCTGG +
Preference number: 2 (lower is better)
Translates to: FYSSVPRDVGSTEGFSNLKFNRG*NGLKVW
Trigger: CCAGACCTTCAGACCATTCCATCCTCTGTTAAACTT...CAGGTTAGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR-3UTR CCA 90 bp ATGGCAGTGATCCACAGAACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGTGTGCCAAGAGATGTaGGATCCACAGAGGGATTTT +
Preference number: 2 (lower is better)
Translates to: MAVIHRTIIRSSSVHCTPVCQEM*DPQRDF
Trigger: AAAATCCCTCTGTGGATCCCACATCTCTTGGCACAC...TGGTGTACAATGGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR-3UTR GCA 90 bp TTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTATTATATTTCTCTTCTaGACCAGCCAGCATTCAGAA +
Preference number: 2 (lower is better)
Translates to: LLFYSSVPRDVGSTEGFSIIFLF*TSQHSE
Trigger: TTCTGAATGCTGGCTGGTGCAGAAGAGAAATATAAT...AGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR CAA 90 bp TTCTCCTATCATCTACACAATAGCCAAGGCAAAGGCAAGACCACTTaGGAGTGTGCAGGAAATACCTTCAAATGTTCATTGAATGGAAAA +
Preference number: 2 (lower is better)
Translates to: FSYHLHNSQGKGKTT*ECAGNTFKCSLNGK
Trigger: TTTTCCATTCAATGAACATTTGAAGGTATTTCCTGCACACTCCAAAGTGGTCTTGCCTTTGCCTTGGCTATTGTGTAGATGATAGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR-3UTR CAA 90 bp GCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTGCCCAGGAGCCTGGCTaGGGGCAGAGAAGTCCCAGC +
Preference number: 3 (lower is better)
Translates to: ACCFTAVCQEMWDPQRDFAQEPG*GQRSPS
Trigger: GCTGGGACTTCTCTGCCCCAAGCCAGGCTCCTGGGC...AAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR TCA 72 bp GCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTaGTCCACAGAACTATCATTAGAAGTTCCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: AAPWQGLQATWQ*STELSLEVPLS
Trigger: GGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR CCA 72 bp TACTCCCCTGCTACAGTGGTTATGAGCCCAGGAGCCTaGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAA +
Preference number: 3 (lower is better)
Translates to: YSPATVVMSPGA*LGAEKSQHSFQ
Trigger: TTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAGGGGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR GCA 72 bp GCACTCCAAGCTGCCAATCTTAAATGCCTACTCCCCTaGTACAGTGGTTATGAGCCCAGGAGCCTGGCTTGG +
Preference number: 3 (lower is better)
Translates to: ALQAANLKCLLP*YSGYEPRSLAW
Trigger: CCAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAGGGGAGTAGGCATTTAAGATTGGCAGCTTGGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR CCA 72 bp AACCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATaGCAAGGTGTACTTTGGGCACAGACAGCCTTGGCT +
Preference number: 3 (lower is better)
Translates to: NQKGEPGLRGRL*QGVLWAQTALA
Trigger: AGCCAAGGCTGTCTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR-3UTR CAA 90 bp CAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAGACCTGGGCACAGACAGCCTaGGCTCTGCTTGCTGTTTTA +
Preference number: 3 (lower is better)
Translates to: QQQHGRKAGSVGGKAPETWAQTA*ALLAVL
Trigger: TAAAACAGCAAGCAGAGCCAAGGCTGTCTGTGCCCA...GGTCTCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR CCA 72 bp AGTCCCAGCACTCCTTTCAACTACCTCCCACCTAACTaGACATGTGTGGTGTCTGGGGAGCAGTGTTGCTGT +
Preference number: 3 (lower is better)
Translates to: SPSTPFNYLPPN*TCVVSGEQCCC
Trigger: ACAGCAACACTGCTCCCCAGACACCACACATGTCCAGTTAGGTGGGAGGTAGTTGAAAGGAGTGCTGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR TCA 72 bp GTCCAAAGGCTGCTGGGTGGATGCTTGACTACATTCTaGGGTAGTCTAACCCTGGCTTGCACAAGTAGCTGG +
Preference number: 3 (lower is better)
Translates to: VQRLLGGCLTTF*GSLTLACTSSW
Trigger: CCAGCTACTTGTGCAAGCCAGGGTTAGACTACCTCAGAATGTAGTCAAGCATCCACCCAGCAGCCTTTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR-3UTR CAA 90 bp AAAGCAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGACAGCCTTGGCTCTGCTaGCTGTTTTACAGCAGTGTG +
Preference number: 3 (lower is better)
Translates to: KAAATWKKSWFCGRQSPRQPWLC*LFYSSV
Trigger: CACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTG...TCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR CCA 72 bp CTCCTTTCAACTACCTCCCACCTAACTGGACATGTGTaGTGTCTGGGGAGCAGTGTTGCTGTTAGACCTCAA +
Preference number: 3 (lower is better)
Translates to: LLSTTSHLTGHV*CLGSSVAVRPQ
Trigger: TTGAGGTCTAACAGCAACACTGCTCCCCAGACACCACACATGTCCAGTTAGGTGGGAGGTAGTTGAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR CCA 72 bp GCTTATGGCAAGGTGTACTTTGGGCACAGACAGCCTTaGCTCTGCTTGCTGTTTTACAGCAGTGTGCCAAGA +
Preference number: 3 (lower is better)
Translates to: AYGKVYFGHRQP*LCLLFYSSVPR
Trigger: TCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGTCTGTGCCCAAAGTACACCTTGCCATAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR GCA 72 bp GACAGCCTTGGCTCTGCTTGCTGTTTTACAGCAGTGTaGCAAGAGATGTGGGATCCACAGAGGGATTTTCTA +
Preference number: 3 (lower is better)
Translates to: DSLGSACCFTAV*QEMWDPQRDFL
Trigger: TAGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR-3UTR CAA 90 bp AAGAAGGCAGAAAAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTATGGCAAGGTGTACTTaGGGCACAGACAGCCTTGGC +
Preference number: 3 (lower is better)
Translates to: KKAEKSPETTGKYTTVATMARCT*GTDSLG
Trigger: GCCAAGGCTGTCTGTGCCCAAAGTACACCTTGCCAT...AGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTTTTCTGCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR GCA 72 bp AATTCAAGCTGCCAACCTGAGCATAGGTGTGAAATGTaGCAGGGAAAACCAGGAAACACAGATGTGCAAGGC +
Preference number: 3 (lower is better)
Translates to: NSSCQPEHRCEM*QGKPGNTDVQG
Trigger: GCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATGCTCAGGTTGGCAGCTTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp GGGAATGCAGGCCTCATGCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTGCCACCAGCACCCGCTaGACCACCTTCAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GNAGLMQPPGRAYRPHGSATSTR*TTFSSL
Trigger: GAGGCTGCTGAAGGTGGTGCAGCGGGTGCTGGTGGC...ACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGCATGAGGCCTGCATTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TTCTGTGGGAGGCAAAGCCCCAGAGACCGGCGTGAACCTGGGCTGAGTGGGGAAGAGAGCCTCCCCAGGTaGGCAGCTGGGTCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: FCGRQSPRDRREPGLSGEESLPR*AAGSWR
Trigger: CCGCCAAGACCCAGCTGCCCACCTGGGGAGGCTCTC...TTCCCCACTCAGCCCAGGTTCACGCCGGTCTCTGGGGCTTTGCCTCCCACAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp GGGAATGCAGGCCTCATGCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTTCGAAGAGCAGGTCCTaGAGCGCCTCAGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: GNAGLMQPPGRAYRPHGSSKSRS*SASATD
Trigger: GTCTGTGGCTGAGGCGCTGCAGGACCTGCTCTTCGA...ACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGCATGAGGCCTGCATTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp CAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAGACCGCCCCTGGACCTGCCTaGGCGCCATCCCCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: QQQHGRKAGSVGGKAPETAPGPA*APSPAS
Trigger: CGAGGCTGGGGATGGCGCTCAGGCAGGTCCAGGGGC...GGTCTCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp GGGAATGCAGGCCTCATGCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTAGCTGGGTCTTCCTCTaGTCCCAGGAGCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: GNAGLMQPPGRAYRPHGSSWVFL*SQELRW
Trigger: CCATCTCAGCTCCTGGGACCAGAGGAAGACCCAGCT...ACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGCATGAGGCCTGCATTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp GGGAATGCAGGCCTCATGCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTAATCCTTGTTGGCAGTaGGCCTGGCAGCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GNAGLMQPPGRAYRPHGSNPCWQ*AWQPPE
Trigger: TTCTGGAGGCTGCCAGGCTCACTGCCAACAAGGATT...ACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGCATGAGGCCTGCATTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp GGGAATGCAGGCCTCATGCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTCCCAGCTCCACCTGCTaGATCAGAACTGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: GNAGLMQPPGRAYRPHGSPSSTC*IRTVMS
Trigger: GGACATCACAGTTCTGATCCAGCAGGTGGAGCTGGG...ACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGCATGAGGCCTGCATTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp AATGCCTACTCCCCTGCTACAGTGGTTATGAGCCCAGGAGCCTGGCTTGGGGCAGCAGGCGGTTCAGTCTaGCCTCCTCATGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: NAYSPATVVMSPGAWLGAAGGSV*PPHGRG
Trigger: GCCTCTGCCATGAGGAGGTCAGACTGAACCGCCTGC...TGCCCCAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAGGGGAGTAGGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp GGGAATGCAGGCCTCATGCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTCTCCCTGCGGCTGTGTaGACTCTCTTTCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: GNAGLMQPPGRAYRPHGSLPAAV*TLFLKQ
Trigger: CTGTTTCAGAAAGAGAGTGCACACAGCCGCAGGGAG...ACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGCATGAGGCCTGCATTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TTCTGTGGGAGGCAAAGCCCCAGAGACCGGCGTGAACCTGGGCTGAGTGGGGAATGTAGATGCTCCAGCTaGTGTGGGTGGTCCGGCACA +
Preference number: 4 (lower is better)
Translates to: FCGRQSPRDRREPGLSGECRCSS*CGWSGT
Trigger: TGTGCCGGACCACCCACACCAGCTGGAGCATCTACA...TTCCCCACTCAGCCCAGGTTCACGCCGGTCTCTGGGGCTTTGCCTCCCACAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp GGGAATGCAGGCCTCATGCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTTCTGACAGCACTCTCTaGTGGAAATGCCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GNAGLMQPPGRAYRPHGSSDSTL*WKCLGK
Trigger: CTTCCCCAGGCATTTCCACCAGAGAGTGCTGTCAGA...ACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGCATGAGGCCTGCATTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TTCTGTGGGAGGCAAAGCCCCAGAGACCGGCGTGAACCTGGGCTGAGTGGGGAAAGTCTGACCTCCTCATaGCAGAGGCCACGGACCACA +
Preference number: 4 (lower is better)
Translates to: FCGRQSPRDRREPGLSGESLTSS*QRPRTT
Trigger: TGTGGTCCGTGGCCTCTGCCATGAGGAGGTCAGACT...TTCCCCACTCAGCCCAGGTTCACGCCGGTCTCTGGGGCTTTGCCTCCCACAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp GGGAATGCAGGCCTCATGCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTCTCTCTGGAGTCAGATaGCGGTGTGAACGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: GNAGLMQPPGRAYRPHGSLSGVR*RCERGN
Trigger: ATTTCCTCGTTCACACCGTCATCTGACTCCAGAGAG...ACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGCATGAGGCCTGCATTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp GGGAATGCAGGCCTCATGCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTGCTTCAGCTCTCCATTaGGGAGCTTGTACATCTCTG +
Preference number: 4 (lower is better)
Translates to: GNAGLMQPPGRAYRPHGSASALH*GACTSL
Trigger: CAGAGATGTACAAGCTCCTCAATGGAGAGCTGAAGC...ACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGCATGAGGCCTGCATTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp TTCTGTGGGAGGCAAAGCCCCAGAGACCGGCGTGAACCTGGGCTGAGTGGGGAACGAGCAGGATCTGTGTaGTCTGACACAGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: FCGRQSPRDRREPGLSGERAGSV*SDTVCP
Trigger: TGGGCAGACTGTGTCAGATCACACAGATCCTGCTCG...TTCCCCACTCAGCCCAGGTTCACGCCGGTCTCTGGGGCTTTGCCTCCCACAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp AATGCCTACTCCCCTGCTACAGTGGTTATGAGCCCAGGAGCCTGGCTTGGGGCACTATGCCTCTCACTCTaGTGCCTCGACCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: NAYSPATVVMSPGAWLGALCLSL*CLDPCL
Trigger: GAGGCAGGGGTCGAGGCAGCAGAGTGAGAGGCATAG...TGCCCCAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAGGGGAGTAGGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp CCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCCAGGGGCAGAAGATCTaGAGAGCCTCCCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PKGRAWTQGSLMARCTLGQGQKI*RASPGG
Trigger: CCCACCTGGGGAGGCTCTCCAGATCTTCTGCCCCTG...GCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp GGGAATGCAGGCCTCATGCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTAGGTCCTGGAGTTTGTaGACATTGGGATCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GNAGLMQPPGRAYRPHGSRSWSL*TLGSSG
Trigger: ACCACTGGATCCCAATGTCCACAAACTCCAGGACCT...ACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGCATGAGGCCTGCATTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp GGGAATGCAGGCCTCATGCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTTCAGTCAGTCTCCCATaGGGACAACTAAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GNAGLMQPPGRAYRPHGSSVSLP*GQLRAS
Trigger: TGAGGCTCTTAGTTGTCCCCATGGGAGACTGACTGA...ACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGCATGAGGCCTGCATTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AATGCCTACTCCCCTGCTACAGTGGTTATGAGCCCAGGAGCCTGGCTTGGGGCAAGCTGCAGCCTTGTCTaGATCTCCCGGAAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: NAYSPATVVMSPGAWLGASCSLV*ISRKWR
Trigger: CCGCCACTTCCGGGAGATCCAGACAAGGCTGCAGCT...TGCCCCAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAGGGGAGTAGGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp TTCTGTGGGAGGCAAAGCCCCAGAGACCGGCGTGAACCTGGGCTGAGTGGGGAAGCCAGTTCCAAATACTaGAGCTCCTTCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: FCGRQSPRDRREPGLSGEASSKY*SSFSLG
Trigger: CCCCAAGGAGAAGGAGCTGCAGTATTTGGAACTGGC...TTCCCCACTCAGCCCAGGTTCACGCCGGTCTCTGGGGCTTTGCCTCCCACAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp AAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACAGTGCTGCCTCGACCCCTaGCTCTGTCCTCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: KGEPGLRGRLWQGVLWAQCCLDP*LCPLCQ
Trigger: CTGACAGAGAGGACAGAGGCAGGGGTCGAGGCAGCA...CTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp ACAGCCTTGGCTCTGCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCACCAGGGGAGCACCCTaGGCTTCGACAGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TALALLAVLQQCAKRCGITRGAP*ASTASR
Trigger: CCTGGAGGCTGTCGAAGCTCAGGGTGCTCCCCTGGT...GATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp AATGCCTACTCCCCTGCTACAGTGGTTATGAGCCCAGGAGCCTGGCTTGGGGCAAGCCACACAGCACCTTaGCAAGGTAGGACAGGTGGA +
Preference number: 4 (lower is better)
Translates to: NAYSPATVVMSPGAWLGASHTAP*QGRTGG
Trigger: TCCACCTGTCCTACCTTGTCAAGGTGCTGTGTGGCT...TGCCCCAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAGGGGAGTAGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp GGGAATGCAGGCCTCATGCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTAGTCAAGCAGGACGTTaGAGTTCATATTCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: GNAGLMQPPGRAYRPHGSSQAGR*SSYSRS
Trigger: GCTACGAGAATATGAACTTCAACGTCCTGCTTGACT...ACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGCATGAGGCCTGCATTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp TTCTGTGGGAGGCAAAGCCCCAGAGACCGGCGTGAACCTGGGCTGAGTGGGGAAAGAAGGCAGCCATGTTaGTTCATCAATAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FCGRQSPRDRREPGLSGERRQPC*FINRAA
Trigger: GGCTGCCCTATTGATGAAGCAACATGGCTGCCTTCT...TTCCCCACTCAGCCCAGGTTCACGCCGGTCTCTGGGGCTTTGCCTCCCACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp CAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAGACCCGGATCCAGACGCTCTaGTCAATGCCCTGCACCACC +
Preference number: 4 (lower is better)
Translates to: QQQHGRKAGSVGGKAPETRIQTL*SMPCTT
Trigger: GGTGGTGCAGGGCATTGAGCAGAGCGTCTGGATCCG...GGTCTCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AATGCCTACTCCCCTGCTACAGTGGTTATGAGCCCAGGAGCCTGGCTTGGGGCATCCTGCCTGCTCACCTaGACATCAGGGAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: NAYSPATVVMSPGAWLGASCLLT*TSGRLS
Trigger: AGAGAGTCTCCCTGATGTCCAGGTGAGCAGGCAGGA...TGCCCCAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAGGGGAGTAGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AATGCCTACTCCCCTGCTACAGTGGTTATGAGCCCAGGAGCCTGGCTTGGGGCACATAGAGCTGGTCCATaGAACTCTCCAGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: NAYSPATVVMSPGAWLGAHRAGP*NSPAAG
Trigger: TCCGGCTGCTGGAGAGTTCCATGGACCAGCTCTATG...TGCCCCAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAGGGGAGTAGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp AAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACAGAGGACGTCTGGGACTTaGGCTGAGATGTATGGCCAG +
Preference number: 4 (lower is better)
Translates to: KGEPGLRGRLWQGVLWAQRTSGT*AEMYGQ
Trigger: CTGGCCATACATCTCAGCTCAAGTCCCAGACGTCCT...CTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp AATGCCTACTCCCCTGCTACAGTGGTTATGAGCCCAGGAGCCTGGCTTGGGGCAGCTGGATCAGAACTGTaGTGTCCTGTACAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: NAYSPATVVMSPGAWLGAAGSEL*CPVQGG
Trigger: ACCGCCTTGTACAGGACATCACAGTTCTGATCCAGC...TGCCCCAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAGGGGAGTAGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp GGGAATGCAGGCCTCATGCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTGCCATATCTCATTGGTaGACACCTCAAATGTCACAT +
Preference number: 4 (lower is better)
Translates to: GNAGLMQPPGRAYRPHGSAISHW*TPQMSH
Trigger: ATGTGACATTTGAGGTGTTCACCAATGAGATATGGC...ACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGCATGAGGCCTGCATTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp CCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCTCTCCAGCAGCCGGATaGAGCACAGGTAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: PKGRAWTQGSLMARCTLGSPAAG*STGRTS
Trigger: AGAAGTCCTACCTGTGCTTCATCCGGCTGCTGGAGA...GCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp CAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAGACCCCACTAGGCAGACTCTaGGCAGCTTGCGCTGGATCA +
Preference number: 4 (lower is better)
Translates to: QQQHGRKAGSVGGKAPETPLGRL*AACAGS
Trigger: TGATCCAGCGCAAGCTGCGCAGAGTCTGCCTAGTGG...GGTCTCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TATGAGCCCAGGAGCCTGGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTGCTCCCACAGCATCCTaGCACCTTTGTCCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: YEPRSLAWGREVPALLSTAPTAS*HLCPAL
Trigger: CAAAGCTGGACAAAGGTGCCAGGATGCTGTGGGAGC...AGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCCAGGCTCCTGGGCTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AATGCCTACTCCCCTGCTACAGTGGTTATGAGCCCAGGAGCCTGGCTTGGGGCACTCCACAGCACTGGCTaGAGGAAAGTACTCAGGATC +
Preference number: 4 (lower is better)
Translates to: NAYSPATVVMSPGAWLGALHSTG*RKVLRI
Trigger: GATCCTGAGTACTTTCCTCCAGCCAGTGCTGTGGAG...TGCCCCAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAGGGGAGTAGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp CCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCCTGTTTGGACAGCAATaGGCTTCCTGCCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PKGRAWTQGSLMARCTLGLFGQQ*ASCLLS
Trigger: GCTGAGCAGGCAGGAAGCCCATTGCTGTCCAAACAG...GCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AATGCCTACTCCCCTGCTACAGTGGTTATGAGCCCAGGAGCCTGGCTTGGGGCAAGTGACTGGTGGCCTTaGTGGACTTGGAGAGCTCAA +
Preference number: 4 (lower is better)
Translates to: NAYSPATVVMSPGAWLGASDWWP*WTWRAQ
Trigger: TTGAGCTCTCCAAGTCCACCAAGGCCACCAGTCACT...TGCCCCAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAGGGGAGTAGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp CAGACAACCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACGAAGGAAGGCCTGCATaGCACTCAGCCACAGGTCTG +
Preference number: 4 (lower is better)
Translates to: QTTKRESLDSGVAYGKVYEGRPA*HSATGL
Trigger: CAGACCTGTGGCTGAGTGCCATGCAGGCCTTCCTTC...GTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGGTTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TATGAGCCCAGGAGCCTGGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTGTGCGATGTAGCTCTTaGGGAGGCACAGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: YEPRSLAWGREVPALLSTVRCSS*GGTGQH
Trigger: ATGCTGTCCTGTGCCTCCCCAAGAGCTACATCGCAC...AGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCCAGGCTCCTGGGCTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp TATGAGCCCAGGAGCCTGGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTGAGCTCCCCATCCTCTaGGTTCTCTGGAGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: YEPRSLAWGREVPALLSTELPIL*VLWSLS
Trigger: AGACAAACTCCAGAGAACTCAGAGGATGGGGAGCTC...AGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCCAGGCTCCTGGGCTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp CCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCTCTTGCAGACAGGCTTaGATCTCCTGCATGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PKGRAWTQGSLMARCTLGSCRQA*ISCMVQ
Trigger: CTGGACCATGCAGGAGATTCAAGCCTGTCTGCAAGA...GCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp GGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTACCTCCCACCTAACTGGCCAGCTCTGCTTGGGTaGAGTCCTGAATCTCATCAC +
Preference number: 4 (lower is better)
Translates to: GLGQRSPSTPFNYLPPNWPALLG*SPESHH
Trigger: GTGATGAGATTCAGGACTTCACCCAAGCAGAGCTGG...CCAGTTAGGTGGGAGGTAGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp CCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCAGGAGGCATGAGGCCTaGAAATCCTTGTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PKGRAWTQGSLMARCTLGRRHEA*KSLLAV
Trigger: CACTGCCAACAAGGATTTTCAGGCCTCATGCCTCCT...GCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp TATGAGCCCAGGAGCCTGGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTGGAAGAGAAGCGGCTTaGAGAAAGGCTGCAGGACTT +
Preference number: 4 (lower is better)
Translates to: YEPRSLAWGREVPALLSTGREAA*RKAAGL
Trigger: AAGTCCTGCAGCCTTTCTGCAAGCCGCTTCTCTTCC...AGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCCAGGCTCCTGGGCTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TTCTGTGGGAGGCAAAGCCCCAGAGACCGGCGTGAACCTGGGCTGAGTGGGGAACAGAATAGGAGAGCTTaGGAATGGGAAAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: FCGRQSPRDRREPGLSGEQNRRA*EWERSC
Trigger: ACAAGACCTTTCCCATTCCCAAGCTCTCCTATTCTG...TTCCCCACTCAGCCCAGGTTCACGCCGGTCTCTGGGGCTTTGCCTCCCACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AAAGCAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGACTGTCCCACCGCCAGTaGCAATCCACCAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: KAAATWKKSWFCGRQSPRLSHRQ*QSTRYS
Trigger: GGAGTACCTGGTGGATTGCCACTGGCGGTGGGACAG...TCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR CAA 72 bp GCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTaGGGCACAGACAGCCTTGGCTCTGCTTGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: AWTQGSLMARCT*GTDSLGSACCF
Trigger: AAAACAGCAAGCAGAGCCAAGGCTGTCTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp CAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAGACCATGGAGACGAGCCACTaGACCAACTTGGGCACTTGT +
Preference number: 4 (lower is better)
Translates to: QQQHGRKAGSVGGKAPETMETSH*TNLGTC
Trigger: ACAAGTGCCCAAGTTGGTTCAGTGGCTCGTCTCCAT...GGTCTCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp CAGACAACCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTGGGACCTGATCTGTTaGTACAGGCAGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QTTKRESLDSGVAYGKVYWDLIC*YRQKRL
Trigger: CAGCCTCTTCTGCCTGTATCAACAGATCAGGTCCCA...GTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGGTTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp AAAGCAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAAATCTCTGGCCACATTaGAGCGGGCAACCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KAAATWKKSWFCGRQSPRNLWPH*SGQPPG
Trigger: TCCTGGGGGTTGCCCGCTTCAATGTGGCCAGAGATT...TCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp AATGCCTACTCCCCTGCTACAGTGGTTATGAGCCCAGGAGCCTGGCTTGGGGCAAACCAGGTGCATTTTTaGCTGAACCATGCACTTGGC +
Preference number: 4 (lower is better)
Translates to: NAYSPATVVMSPGAWLGANQVHF*LNHALG
Trigger: GCCAAGTGCATGGTTCAGTCAAAAATGCACCTGGTT...TGCCCCAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAGGGGAGTAGGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp AAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACAGCCAGAAGCAACCCGTTaGTTGCAACCAGGTGCATTT +
Preference number: 4 (lower is better)
Translates to: KGEPGLRGRLWQGVLWAQPEATR*LQPGAF
Trigger: AAATGCACCTGGTTGCAATCAACGGGTTGCTTCTGG...CTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp TATGAGCCCAGGAGCCTGGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTTCGTGCGCTTCAGCATaGCCTTCTGGAAAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: YEPRSLAWGREVPALLSTSCASA*PSGKGD
Trigger: ATCTCCTTTTCCAGAAGGGCATGCTGAAGCGCACGA...AGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCCAGGCTCCTGGGCTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp TATGAGCCCAGGAGCCTGGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTCTTTCTTTCCTTCTGTaGCAGCTGCTACCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: YEPRSLAWGREVPALLSTLSFLL*QLLPWE
Trigger: CTCCCAAGGTAGCAGCTGGCACAGAAGGAAAGAAAG...AGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCCAGGCTCCTGGGCTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp CCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACTCTCTGGTGGAAATaGCTGGGGAAGAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: PKGRAWTQGSLMARCTLGTLWWK*LGKRRF
Trigger: AAACCTCCTCTTCCCCAGGCATTTCCACCAGAGAGT...GCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TTCTGTGGGAGGCAAAGCCCCAGAGACCGGCGTGAACCTGGGCTGAGTGGGGAACTTGAATCTCCTGCATaGTCCAGTTCTCCTGATTAT +
Preference number: 4 (lower is better)
Translates to: FCGRQSPRDRREPGLSGELESPA*SSSPDY
Trigger: ATAATCAGGAGAACTGGACCATGCAGGAGATTCAAG...TTCCCCACTCAGCCCAGGTTCACGCCGGTCTCTGGGGCTTTGCCTCCCACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TTCTGTGGGAGGCAAAGCCCCAGAGACCGGCGTGAACCTGGGCTGAGTGGGGAACCATTTCCCAACTGCTaGATGGCAAGGATTATTTTC +
Preference number: 4 (lower is better)
Translates to: FCGRQSPRDRREPGLSGEPFPNC*MARIIF
Trigger: GAAAATAATCCTTGCCATCCAGCAGTTGGGAAATGG...TTCCCCACTCAGCCCAGGTTCACGCCGGTCTCTGGGGCTTTGCCTCCCACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp GGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTACCTCCCACCTAACTGGCCAAGAGAGTTGGCTTaGGACCATCAAAGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: GLGQRSPSTPFNYLPPNWPRELA*DHQRVQ
Trigger: CTGGACTCTTTGATGGTCCCAAGCCAACTCTCTTGG...CCAGTTAGGTGGGAGGTAGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp GGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTACCTCCCACCTAACTGGCATCGTCTCTGTGGTTaGTGTGTTCTTTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: GLGQRSPSTPFNYLPPNWHRLCG*CVLSTQ
Trigger: CTGAGTGGAAAGAACACATCAACCACAGAGACGATG...CCAGTTAGGTGGGAGGTAGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp ACAGCCTTGGCTCTGCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCAACTGGAACAAGTTGTaGAGCCCCTGGACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TALALLAVLQQCAKRCGINWNKL*SPWTCL
Trigger: CAGGCAGGTCCAGGGGCTTCACAACTTGTTCCAGTT...GATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp AAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACAGAGCTGTGGAACTTCATaGTGCTGTACTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KGEPGLRGRLWQGVLWAQSCGTS*CCTLSP
Trigger: TGGAGACAGAGTACAGCATCATGAAGTTCCACAGCT...CTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp CCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCTTCGTCACAAAGATCTaGTGTAGATGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PKGRAWTQGSLMARCTLGFVTKI*CRCSSW
Trigger: CCAGCTGGAGCATCTACATCAGATCTTTGTGACGAA...GCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp ACAGCCTTGGCTCTGCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCGGCCATGGGGTTTTCTaGCAGCACTCTCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: TALALLAVLQQCAKRCGIGHGVF*QHSLVE
Trigger: TTCCACCAGAGAGTGCTGTCAGAAAACCCCATGGCC...GATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp CCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCCATAGTCTATTTCGCTaGAGGAGTCAAGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: PKGRAWTQGSLMARCTLGHSLFR*RSQAGR
Trigger: ACGTCCTGCTTGACTCCTTCAGCGAAATAGACTATG...GCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp GGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTACCTCCCACCTAACTGGCAGGCTTCACTCTCTTaGTCCTCATCTATACCATCC +
Preference number: 4 (lower is better)
Translates to: GLGQRSPSTPFNYLPPNWQASLS*SSSIPS
Trigger: GGATGGTATAGATGAGGAGCAAGAGAGTGAAGCCTG...CCAGTTAGGTGGGAGGTAGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp AAAGCAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGACACTGTGGCTCCTCCTaGACAGGCTTCACTCTCTTG +
Preference number: 4 (lower is better)
Translates to: KAAATWKKSWFCGRQSPRHCGSS*TGFTLL
Trigger: CAAGAGAGTGAAGCCTGTGCAGGAGGAGCCACAGTG...TCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp ACAGCCTTGGCTCTGCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCAGACTCTGCGCAGCTTaGGCTGGATCAAGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: TALALLAVLQQCAKRCGIRLCAA*AGSRPF
Trigger: GAAAGGCCTTGATCCAGCGCAAGCTGCGCAGAGTCT...GATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp ACAGCCTTGGCTCTGCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCTATCCTCTCTGCTGTaGTCTGTCTGGACCCACCTC +
Preference number: 4 (lower is better)
Translates to: TALALLAVLQQCAKRCGILSSLL*SVWTHL
Trigger: GAGGTGGGTCCAGACAGAGCACAGCAGAGAGGATAG...GATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp CAGACAACCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTCCCTTCACATAGGTTaGGTCCCATTGGAGACACTC +
Preference number: 4 (lower is better)
Translates to: QTTKRESLDSGVAYGKVYSLHIG*VPLETL
Trigger: GAGTGTCTCCAATGGGACCCAACCTATGTGAAGGGA...GTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGGTTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp GCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTAGCAGCGGCCTGTCCTaGCTGTCTTGGAGACCCTCA +
Preference number: 4 (lower is better)
Translates to: ACCFTAVCQEMWDPQRDFSSGLS*LSWRPS
Trigger: TGAGGGTCTCCAAGACAGCCAGGACAGGCCGCTGCT...AAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTCAGACAACCAAACCCCAGGTGGGCAGCTaGGTCTTGGCGGTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: KSPETTGKYTTVATQTTKPQVGS*VLAVLP
Trigger: CGGAAGAACCGCCAAGACCCAGCTGCCCACCTGGGG...TTTGGTTGTCTGAGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp ACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCTGAAGAGCCCAGTGAGTTGGCTGTCCCCTGCTaGCTCCACTGTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TIIRSSSVHCTPAEEPSELAVPC*LHCGSS
Trigger: GGAGGAGCCACAGTGGAGCCAGCAGGGGACAGCCAA...CTCACTGGGCTCTTCAGCTGGTGTACAATGGACAGAGGAACTTCTAATGATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACAGGTTTATAGTGACTGGTaGCCTTGGTGGACTTGGAGA +
Preference number: 4 (lower is better)
Translates to: KGEPGLRGRLWQGVLWAQVYSDW*PWWTWR
Trigger: TCTCCAAGTCCACCAAGGCCACCAGTCACTATAAAC...CTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp CAGACAACCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTCTCATCCTCCCTGTTaGGCACCAACATGCCAAACT +
Preference number: 4 (lower is better)
Translates to: QTTKRESLDSGVAYGKVYSHPPC*APTCQT
Trigger: AGTTTGGCATGTTGGTGCCCAACAGGGAGGATGAGA...GTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGGTTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR CAA 72 bp CGCTTATGGCAAGGTGTACTTTGGGCACAGACAGCCTaGGCTCTGCTTGCTGTTTTACAGCAGTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: RLWQGVLWAQTA*ALLAVLQQCAK
Trigger: CTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGTCTGTGCCCAAAGTACACCTTGCCATAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp TTCTGTGGGAGGCAAAGCCCCAGAGACCGGCGTGAACCTGGGCTGAGTGGGGAAGATTTTCATGTTAGCTaGTACCTGTCCTTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: FCGRQSPRDRREPGLSGEDFHVS*YLSFVD
Trigger: ATCAACAAAGGACAGGTATCAGCTAACATGAAAATC...TTCCCCACTCAGCCCAGGTTCACGCCGGTCTCTGGGGCTTTGCCTCCCACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp GGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTACCTCCCACCTAACTGGTCTGCTCAAAGCATCTaGAAGCATCTTGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: GLGQRSPSTPFNYLPPNWSAQSI*KHLGST
Trigger: AGTGCTTCCAAGATGCTTTCAGATGCTTTGAGCAGA...CCAGTTAGGTGGGAGGTAGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp ACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCTGAAGAGCCCAGTGAGTCCGGCCCTCCCTGTTaGGCAATTCTGCCGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TIIRSSSVHCTPAEEPSESGPPC*AILPLL
Trigger: CAGAAGCGGCAGAATTGCTCAACAGGGAGGGCCGGA...CTCACTGGGCTCTTCAGCTGGTGTACAATGGACAGAGGAACTTCTAATGATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp AAAGCAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAGCTCATAAGACTCACTaGTTCTCTCTCGGCACTCCC +
Preference number: 4 (lower is better)
Translates to: KAAATWKKSWFCGRQSPRAHKTH*FSLGTP
Trigger: GGGAGTGCCGAGAGAGAATCAGTGAGTCTTATGAGC...TCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp CAGACAACCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACACAGGGTCAGAATTTTaGCCTGCTGAGTCATCACCT +
Preference number: 4 (lower is better)
Translates to: QTTKRESLDSGVAYGKVYTGSEF*PAESSP
Trigger: AGGTGATGACTCAGCAGGTCAAAATTCTGACCCTGT...GTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGGTTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp AAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACAGTGCACTCAGGTACTTTaGAGCAGCTTCCAGGTAAAA +
Preference number: 4 (lower is better)
Translates to: KGEPGLRGRLWQGVLWAQCTQVL*SSFQVK
Trigger: TTTTACCTGGAAGCTGCTGCAAAGTACCTGAGTGCA...CTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp CATAGGTGTGAAATGTGCCAGGGAAAACCAGGAAACACAGATGTGCAAGGCATAATGCTCCAGCTGGTGTaGGTGGTCCGGCACACATCC +
Preference number: 4 (lower is better)
Translates to: HRCEMCQGKPGNTDVQGIMLQLV*VVRHTS
Trigger: GGATGTGTGCCGGACCACCCACACCAGCTGGAGCAT...TATGCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACAGCCTTTCATTATGCTTTaGGCAGTGTCTCCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: KGEPGLRGRLWQGVLWAQPFIML*AVSPVR
Trigger: CCTTACTGGAGACACTGCCCAAAGCATAATGAAAGG...CTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TATGAGCCCAGGAGCCTGGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTGAGTCCAGAATCTCTTaGAAGGCGATCAAAGGATTC +
Preference number: 4 (lower is better)
Translates to: YEPRSLAWGREVPALLSTESRIS*KAIKGF
Trigger: GAATCCTTTGATCGCCTTCCAAGAGATTCTGGACTC...AGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCCAGGCTCCTGGGCTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TATGAGCCCAGGAGCCTGGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTAGAATCCAAGAGAGTTaGCTTGGGACCATCAAAGAG +
Preference number: 4 (lower is better)
Translates to: YEPRSLAWGREVPALLSTRIQES*LGTIKE
Trigger: CTCTTTGATGGTCCCAAGCCAACTCTCTTGGATTCT...AGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCCAGGCTCCTGGGCTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp CCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCTCAAAAAGCTCCTCTTaGCAGTACATTCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PKGRAWTQGSLMARCTLGSKSSS*QYILRA
Trigger: TGCCCTCAGAATGTACTGCCAAGAGGAGCTTTTTGA...GCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp GCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTTGGATCTCCCGGAAGTaGCGGAAGAGAAGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: ACCFTAVCQEMWDPQRDFWISRK*RKRSGL
Trigger: CAAGCCGCTTCTCTTCCGCCACTTCCGGGAGATCCA...AAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AAGAAGGCAGAAAAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTCCTTCAGCAGCCTCTTaGGCACCTGGCCCGGCCAAT +
Preference number: 4 (lower is better)
Translates to: KKAEKSPETTGKYTTVATPSAAS*APGPAN
Trigger: ATTGGCCGGGCCAGGTGCCCAAGAGGCTGCTGAAGG...AGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTTTTCTGCCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTAACCTGCAGCAAACTGGTCCATaGGGCCCGTACAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FYSSVPRDVGSTEGFSNLQQTGP*GPYRAG
Trigger: GCCTGCTCTGTACGGGCCCCATGGACCAGTTTGCTG...CAGGTTAGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp CCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCCCAAATTCGATGGGCTaGGTTTTTCTTTTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: PKGRAWTQGSLMARCTLGPNSMG*VFLLFP
Trigger: AGGGAACAAAAGAAAAACTCAGCCCATCGAATTTGG...GCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp AAAGCAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAAGGATCTGTGTGATCTaGCACAGTCTGCCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: KAAATWKKSWFCGRQSPRRICVI*HSLPKR
Trigger: CCTTTTGGGCAGACTGTGTCAGATCACACAGATCCT...TCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp CAGACAACCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTGTGCACTCTCTTTCTaGAACAGGTCATGGATGTAC +
Preference number: 4 (lower is better)
Translates to: QTTKRESLDSGVAYGKVYCALSF*NRSWMY
Trigger: GTACATCCATGACCTGTTTCAGAAAGAGAGTGCACA...GTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGGTTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp AAAGCAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAATACCCAGCTCCACCTaGTGGATCAGAACTGTGATG +
Preference number: 4 (lower is better)
Translates to: KAAATWKKSWFCGRQSPRIPSST*WIRTVM
Trigger: CATCACAGTTCTGATCCAGCAGGTGGAGCTGGGTAT...TCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp TATGAGCCCAGGAGCCTGGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTTCACCATTTCCCAACTaGTGGATGGCAAGGATTATT +
Preference number: 4 (lower is better)
Translates to: YEPRSLAWGREVPALLSTSPFPN*WMARII
Trigger: AATAATCCTTGCCATCCAGCAGTTGGGAAATGGTGA...AGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCCAGGCTCCTGGGCTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp ACAGCCTTGGCTCTGCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCCACGCCTTTCATTATaGTTTGGGCAGTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TALALLAVLQQCAKRCGIPRLSL*FGQCLQ
Trigger: CTGGAGACACTGCCCAAAGCATAATGAAAGGCGTGG...GATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp TTCTCTTCTGCACCAGCCAGCATTCAGAAGTTTAACAGAGGATGGAATGGTCTGGACAGAAGGAAGGCCTaGATGGCACTCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: FSSAPASIQKFNRGWNGLDRRKA*MALSHR
Trigger: CCTGTGGCTGAGTGCCATGCAGGCCTTCCTTCTGTC...CAGACCATTCCATCCTCTGTTAAACTTCTGAATGCTGGCTGGTGCAGAAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp CATAGGTGTGAAATGTGCCAGGGAAAACCAGGAAACACAGATGTGCAAGGCATAACCTCCTCCAGCGGATaGACAGAGACACCACTAGGC +
Preference number: 4 (lower is better)
Translates to: HRCEMCQGKPGNTDVQGITSSSG*TETPLG
Trigger: GCCTAGTGGTGTCTCTGTGCATCCGCTGGAGGAGGT...TATGCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp CAGACAACCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACACCATTCCAGCTGAGTaGTTGAGCATGTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: QTTKRESLDSGVAYGKVYTIPAE*LSMSNL
Trigger: CAAGTTTGACATGCTCAACCACTCAGCTGGAATGGT...GTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGGTTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp CAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAGACCTCATTCTGGGCTATCTaGCAATATTTGGCATCCACC +
Preference number: 4 (lower is better)
Translates to: QQQHGRKAGSVGGKAPETSFWAI*QYLAST
Trigger: GGTGGATGCCAAATATTGCCAGATAGCCCAGAATGA...GGTCTCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TTCTGTGGGAGGCAAAGCCCCAGAGACCGGCGTGAACCTGGGCTGAGTGGGGAAAAAGGACTTGTAATTTaGCTTGAGGATGTCTTTACA +
Preference number: 4 (lower is better)
Translates to: FCGRQSPRDRREPGLSGEKGLVI*LEDVFT
Trigger: TGTAAAGACATCCTCAAGCCAAATTACAAGTCCTTT...TTCCCCACTCAGCCCAGGTTCACGCCGGTCTCTGGGGCTTTGCCTCCCACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AAGAAGGCAGAAAAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTCCACAGACTTCACACTaGCTGCCACCAGCACCCGCT +
Preference number: 4 (lower is better)
Translates to: KKAEKSPETTGKYTTVATPQTSH*LPPAPA
Trigger: AGCGGGTGCTGGTGGCAGCCAGTGTGAAGTCTGTGG...AGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTTTTCTGCCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp CCAAGGCAAAGGCAAGACCACTTTGGAGTGTGCAGGAAATACCTTCAAATGTTCTGCTTCCCACATTTCTaGGCACGCCTTCTAGGGCGG +
Preference number: 4 (lower is better)
Translates to: PRQRQDHFGVCRKYLQMFCFPHF*ARLLGR
Trigger: CCGCCCTAGAAGGCGTGCCCAGAAATGTGGGAAGCA...GAACATTTGAAGGTATTTCCTGCACACTCCAAAGTGGTCTTGCCTTTGCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR CAA 72 bp AAGGTGTACTTTGGGCACAGACAGCCTTGGCTCTGCTaGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: KVYFGHRQPWLC*LFYSSVPRDVG
Trigger: TCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGTCTGTGCCCAAAGTACACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp ATGGCAGTGATCCACAGAACTATCATTAGAAGTTCCTCTGTCCATTGTACACCATTGGGAGAGTCTCGCTaGGGAGAGTCCTCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: MAVIHRTIIRSSSVHCTPLGESR*GESSGR
Trigger: TCTCCCCGAGGACTCTCCTCAGCGAGACTCTCCCAA...TGGTGTACAATGGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp TTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTGATCTGAAACCCTCCTaGTGTGCTCCTGCACCTTCC +
Preference number: 4 (lower is better)
Translates to: LLFYSSVPRDVGSTEGFSDLKPS*CAPAPS
Trigger: GGAAGGTGCAGGAGCACATCAGGAGGGTTTCAGATC...AGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp TTCTCTTCTGCACCAGCCAGCATTCAGAAGTTTAACAGAGGATGGAATGGTCTGAACACTGCGGGGGTCTaGACCCTTGGTCAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: FSSAPASIQKFNRGWNGLNTAGV*TLGQEK
Trigger: CTTCTCTTGACCAAGGGTGCAGACCCCCGCAGTGTT...CAGACCATTCCATCCTCTGTTAAACTTCTGAATGCTGGCTGGTGCAGAAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp GGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTACCTCCCACCTAACTGGTTCTGGAAAAGGAGATaGATCAATGTGTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: GLGQRSPSTPFNYLPPNWFWKRR*INVFPL
Trigger: CAATGGGAACACATTGATGCATCTCCTTTTCCAGAA...CCAGTTAGGTGGGAGGTAGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp AAAGCAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGATGTCTACTGTGCTTCTaGTGGCATAGTGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: KAAATWKKSWFCGRQSPRCLLCF*WHSGTE
Trigger: CTCTGTTCCACTATGCCAGCAGAAGCACAGTAGACA...TCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp TTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTCACCAGTGTCCGCTCTaGCTCCCCCGATATCACATA +
Preference number: 4 (lower is better)
Translates to: LLFYSSVPRDVGSTEGFSHQCPL*LPRYHI
Trigger: TATGTGATATCGGGGGAGGCAGAGCGGACACTGGTG...AGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp GCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTGGCTTGCAGAAAGGCTaGAGGACTTCCTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: ACCFTAVCQEMWDPQRDFGLQKG*RTSSAF
Trigger: GAATGCTGAGGAAGTCCTGCAGCCTTTCTGCAAGCC...AAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp GCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTTCCATGCTCATCAGCTaGAGCCTTGTCTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: ACCFTAVCQEMWDPQRDFSMLIS*SLVWIS
Trigger: GGAGATCCAGACAAGGCTGCAGCTGATGAGCATGGA...AAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp ACAGCCTTGGCTCTGCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCGCCACTGAACCAACTTaGGCACTTGTTCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: TALALLAVLQQCAKRCGIATEPT*ALVPVS
Trigger: AGAAACTGGAACAAGTGCCCAAGTTGGTTCAGTGGC...GATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp CAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAGACCGGGCACCAAATTCGATaGGCTGAGTTTTTCTTTTGT +
Preference number: 4 (lower is better)
Translates to: QQQHGRKAGSVGGKAPETGHQIR*AEFFFC
Trigger: ACAAAAGAAAAACTCAGCCCATCGAATTTGGTGCCC...GGTCTCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTAACCTGAGTCCTCTGGGTAGCTaGAGGACAGAAGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: FYSSVPRDVGSTEGFSNLSPLGS*RTEGRP
Trigger: AGGCCTTCCTTCTGTCCTCCAGCTACCCAGAGGACT...CAGGTTAGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTGCCTTTCGCTGCTTCTaGGAAAGGATGGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LLFYSSVPRDVGSTEGFSAFRCF*ERMAAR
Trigger: TCTGGCTGCCATCCTTTCCCAGAAGCAGCGAAAGGC...AGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp ACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCTGAAGAGCCCAGTGAGCCTCCAGTTCAGCCCTaGAAATCAGCACAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TIIRSSSVHCTPAEEPSEPPVQP*KSAQPL
Trigger: CAGAGGCTGTGCTGATTTCCAGGGCTGAACTGGAGG...CTCACTGGGCTCTTCAGCTGGTGTACAATGGACAGAGGAACTTCTAATGATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTCAGACAACCAAATGTGGCTCTGCTCCTTaGAGCCCAGGTGACTACGGA +
Preference number: 4 (lower is better)
Translates to: KSPETTGKYTTVATQTTKCGSAP*SPGDYG
Trigger: TCCGTAGTCACCTGGGCTCCAAGGAGCAGAGCCACA...TTTGGTTGTCTGAGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp TATGAGCCCAGGAGCCTGGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTTTGCCACACTTCTGTTaGAAATCCAGTAGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: YEPRSLAWGREVPALLSTLPHFC*KSSSEN
Trigger: ATTTTCACTACTGGATTTTCAACAGAAGTGTGGCAA...AGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCCAGGCTCCTGGGCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp TTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTCCACCGTTTCCACTTTaGTGGAACCCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLFYSSVPRDVGSTEGFSPPFPL*WNPPLP
Trigger: AGGAAGAGGAGGGTTCCATCAAAGTGGAAACGGTGG...AGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp CCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCTATTTGGCATCCACCTaGAAAATTCCAAAGAACTCA +
Preference number: 4 (lower is better)
Translates to: PKGRAWTQGSLMARCTLGYLAST*KIPKNS
Trigger: TGAGTTCTTTGGAATTTTTCAGGTGGATGCCAAATA...GCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp CCAAGGCAAAGGCAAGACCACTTTGGAGTGTGCAGGAAATACCTTCAAATGTTCGCTTGTACTCTTGGATaGTGGAGAACACCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PRQRQDHFGVCRKYLQMFACTLG*WRTPPQ
Trigger: CTGGGGAGGTGTTCTCCATCATCCAAGAGTACAAGC...GAACATTTGAAGGTATTTCCTGCACACTCCAAAGTGGTCTTGCCTTTGCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp CAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAGACCTGGAATCTGACAGCTTaGAGTGATCTAAGACAATGT +
Preference number: 4 (lower is better)
Translates to: QQQHGRKAGSVGGKAPETWNLTA*SDLRQC
Trigger: ACATTGTCTTAGATCACTGCAAGCTGTCAGATTCCA...GGTCTCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp TTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTAACCTGCTGGTAACACTTAGCTaGCACCTTCCAGCACTGGTG +
Preference number: 4 (lower is better)
Translates to: FYSSVPRDVGSTEGFSNLLVTLS*HLPALV
Trigger: CACCAGTGCTGGAAGGTGGCAGCTAAGTGTTACCAG...CAGGTTAGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp AAAGCAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGACGGCCATCATTTCCTTaGTCTTATTTGCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: KAAATWKKSWFCGRQSPRRPSFP*SYLHSG
Trigger: ACCTGAGTGCAAATAAGAGCAAGGAAATGATGGCCG...TCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp AAGAAGGCAGAAAAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTCCAGAAGTGCAGGAGTaGGATGTAGCTCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: KKAEKSPETTGKYTTVATPEVQE*DVALGE
Trigger: CTCCCCAAGAGCTACATCGCACTCCTGCACTTCTGG...AGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTTTTCTGCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp CATAGGTGTGAAATGTGCCAGGGAAAACCAGGAAACACAGATGTGCAAGGCATACTCTGCTCAATGCCCTaGACCACCACTTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: HRCEMCQGKPGNTDVQGILCSMP*TTTLPS
Trigger: AGAAGGCAAAGTGGTGGTGCAGGGCATTGAGCAGAG...TATGCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp ATGGCAGTGATCCACAGAACTATCATTAGAAGTTCCTCTGTCCATTGTACACCATCCTGCACCTTCCTCTaGAGCATGTGGCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: MAVIHRTIIRSSSVHCTPSCTFL*SMWLCS
Trigger: GGAGCAGAGCCACATGCTGCAGAGGAAGGTGCAGGA...TGGTGTACAATGGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp ATGGCAGTGATCCACAGAACTATCATTAGAAGTTCCTCTGTCCATTGTACACCACTCTTCTGCAGGCCCTaGGTCCACTCACCATTTCCC +
Preference number: 4 (lower is better)
Translates to: MAVIHRTIIRSSSVHCTPLFCRP*VHSPFP
Trigger: GGGAAATGGTGAGTGGACCCAGGGCCTGCAGAAGAG...TGGTGTACAATGGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AAAGCAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGATCCAGCACTGGTGCTTaGCATAATAGTCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: KAAATWKKSWFCGRQSPRSSTGA*HNSLLV
Trigger: TACAAGGAGACTATTATGCCAAGCACCAGTGCTGGA...TCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp ACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCTGAAGAGCCCAGTGAGTGCCAGCCAGCTGGCTaGTTTGATAGCAGAGATCGA +
Preference number: 4 (lower is better)
Translates to: TIIRSSSVHCTPAEEPSECQPAG*FDSRDR
Trigger: TCGATCTCTGCTATCAAACCAGCCAGCTGGCTGGCA...CTCACTGGGCTCTTCAGCTGGTGTACAATGGACAGAGGAACTTCTAATGATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp GCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTTCTCAAAGTCCTCTaGGTAGCTGGAGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: ACCFTAVCQEMWDPQRDFLLKVL*VAGGQK
Trigger: CTTCTGTCCTCCAGCTACCCAGAGGACTTTGAGAAG...AAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp GCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTTTCCACTCAGGCTTTTaGTCCATTACCCACCGGAAA +
Preference number: 4 (lower is better)
Translates to: ACCFTAVCQEMWDPQRDFFHSGF*SITHRK
Trigger: TTTCCGGTGGGTAATGGATCAAAAGCCTGAGTGGAA...AAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp AAAGCAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAATACCTGTCCTTTGTTaGTACCCTTCAGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: KAAATWKKSWFCGRQSPRIPVLC*YPSASF
Trigger: GAAAGAAGCTGAAGGGTATCAACAAAGGACAGGTAT...TCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp CAGACAACCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTGCTGTCATATCATTaGGAATGTTTAAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: QTTKRESLDSGVAYGKVYLLSYH*ECLRPC
Trigger: ACATGGCCTTAAACATTCTCAATGATATGACAGCAA...GTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGGTTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp TTCTCTTCTGCACCAGCCAGCATTCAGAAGTTTAACAGAGGATGGAATGGTCTGACCCTTTCTGGGACCTaGTCTGTTGATACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: FSSAPASIQKFNRGWNGLTLSGT*SVDTGR
Trigger: TCTGCCTGTATCAACAGATCAGGTCCCAGAAAGGGT...CAGACCATTCCATCCTCTGTTAAACTTCTGAATGCTGGCTGGTGCAGAAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp TTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTAACCTGTGGCGTTGGGGTCATTaGTGCATTTCATCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: FYSSVPRDVGSTEGFSNLWRWGH*CISSAV
Trigger: CACTGCTGATGAAATGCATCAATGACCCCAACGCCA...CAGGTTAGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp CATAGGTGTGAAATGTGCCAGGGAAAACCAGGAAACACAGATGTGCAAGGCATATACTCAGGATCTACCTaGTCTAAGCTCTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: HRCEMCQGKPGNTDVQGIYSGST*SKLFSA
Trigger: GGCCGAGAAGAGCTTAGAGCAGGTAGATCCTGAGTA...TATGCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp CATAGGTGTGAAATGTGCCAGGGAAAACCAGGAAACACAGATGTGCAAGGCATAATTCCCGGTCCTTCTTaGCGTACAGAAACTCCCAGA +
Preference number: 4 (lower is better)
Translates to: HRCEMCQGKPGNTDVQGIIPGPS*RTETPR
Trigger: TCTGGGAGTTTCTGTACGGCAAGAAGGACCGGGAAT...TATGCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp GACAACGGACAGCAAAGGTGGCTGTCCCTTTTTAACACTAATTCACATTATATTGGCCCGGCCAATCCATaGTCATCAGCTGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: DNGQQRWLSLFNTNSHYIGPANP*SSAAAL
Trigger: CAAGGCTGCAGCTGATGAGCATGGATTGGCCGGGCC...AATATAATGTGAATTAGTGTTAAAAAGGGACAGCCACCTTTGCTGTCCGTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp GACAACGGACAGCAAAGGTGGCTGTCCCTTTTTAACACTAATTCACATTATATTGTACTTCTGGTAGGCTaGTTGCTGCCTCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: DNGQQRWLSLFNTNSHYIVLLVG*LLPPVA
Trigger: GGCCACCGGAGGCAGCAAGCAGCCTACCAGAAGTAC...AATATAATGTGAATTAGTGTTAAAAAGGGACAGCCACCTTTGCTGTCCGTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp ATGGCAGTGATCCACAGAACTATCATTAGAAGTTCCTCTGTCCATTGTACACCACTCCTGATGTGCTCCTaGACCTTCCTCTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: MAVIHRTIIRSSSVHCTPLLMCS*TFLCSM
Trigger: CATGCTGCAGAGGAAGGTGCAGGAGCACATCAGGAG...TGGTGTACAATGGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp ACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCTGAAGAGCCCAGTGAGAACCTGCAGTTGGTCTaGGCTTCTCTGCAAAAGTCG +
Preference number: 4 (lower is better)
Translates to: TIIRSSSVHCTPAEEPSENLQLV*ASLQKS
Trigger: CGACTTTTGCAGAGAAGCCCAGACCAACTGCAGGTT...CTCACTGGGCTCTTCAGCTGGTGTACAATGGACAGAGGAACTTCTAATGATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp GACAACGGACAGCAAAGGTGGCTGTCCCTTTTTAACACTAATTCACATTATATTAGGCGGCTCAGAAGCTaGGTCTTCCTCTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: DNGQQRWLSLFNTNSHYIRRLRS*VFLWSQ
Trigger: CTGGGACCAGAGGAAGACCCAGCTTCTGAGCCGCCT...AATATAATGTGAATTAGTGTTAAAAAGGGACAGCCACCTTTGCTGTCCGTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp CCAAGGCAAAGGCAAGACCACTTTGGAGTGTGCAGGAAATACCTTCAAATGTTCGGGGGTCTGCACCCTTaGTCAAGAGAAGAAAAGCTA +
Preference number: 4 (lower is better)
Translates to: PRQRQDHFGVCRKYLQMFGGLHP*SREEKL
Trigger: TAGCTTTTCTTCTCTTGACCAAGGGTGCAGACCCCC...GAACATTTGAAGGTATTTCCTGCACACTCCAAAGTGGTCTTGCCTTTGCCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp CCAAGGCAAAGGCAAGACCACTTTGGAGTGTGCAGGAAATACCTTCAAATGTTCGTGGTTTATAGTGACTaGTGGCCTTGGTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: PRQRQDHFGVCRKYLQMFVVYSD*WPWWTW
Trigger: CCAAGTCCACCAAGGCCACCAGTCACTATAAACCAC...GAACATTTGAAGGTATTTCCTGCACACTCCAAAGTGGTCTTGCCTTTGCCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TTCTCTTCTGCACCAGCCAGCATTCAGAAGTTTAACAGAGGATGGAATGGTCTGGAGCTTGTACATCTCTaGGTTCACCATAAGGGACCG +
Preference number: 4 (lower is better)
Translates to: FSSAPASIQKFNRGWNGLELVHL*VHHKGP
Trigger: CGGTCCCTTATGGTGAACCCAGAGATGTACAAGCTC...CAGACCATTCCATCCTCTGTTAAACTTCTGAATGCTGGCTGGTGCAGAAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp CATAGGTGTGAAATGTGCCAGGGAAAACCAGGAAACACAGATGTGCAAGGCATAGGCCCTGGGTCATTCTaGGCTATCTGGCAATATTTG +
Preference number: 4 (lower is better)
Translates to: HRCEMCQGKPGNTDVQGIGPGSF*AIWQYL
Trigger: CAAATATTGCCAGATAGCCCAGAATGACCCAGGGCC...TATGCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTTCTGGTGGAAATGCCTaGGGAAGAGGAGGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: LLFYSSVPRDVGSTEGFSSGGNA*GRGGLG
Trigger: TCCTAAACCTCCTCTTCCCCAGGCATTTCCACCAGA...AGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp CATAGGTGTGAAATGTGCCAGGGAAAACCAGGAAACACAGATGTGCAAGGCATAAGAATTTTGACCTGCTaGGTCATCACCTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: HRCEMCQGKPGNTDVQGIRILTC*VITSSA
Trigger: AGCAGAGGAGGTGATGACTCAGCAGGTCAAAATTCT...TATGCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp AAAGCAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGATCATACTCTTCCTCCTaGACAGTACCTTCATCTTTT +
Preference number: 4 (lower is better)
Translates to: KAAATWKKSWFCGRQSPRSYSSS*TVPSSF
Trigger: AAAAGATGAAGGTACTGTTCAGGAGGAAGAGTATGA...TCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp TTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTAACCTGAGAAAATCAGGAACCTaGAGTTGGTCTGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: FYSSVPRDVGSTEGFSNLRKSGT*SWSGLL
Trigger: GAGAAGCCCAGACCAACTGCAGGTTCCTGATTTTCT...CAGGTTAGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp GCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTTATGGTTTCAATGTTTaGACCGATGGAGACGAGCCA +
Preference number: 4 (lower is better)
Translates to: ACCFTAVCQEMWDPQRDFYGFNV*TDGDEP
Trigger: TGGCTCGTCTCCATCGGTGCAAACATTGAAACCATA...AAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp GACAACGGACAGCAAAGGTGGCTGTCCCTTTTTAACACTAATTCACATTATATTGAGACCCTCAGGCAGTaGTCCACTGTCAATCAGGCG +
Preference number: 4 (lower is better)
Translates to: DNGQQRWLSLFNTNSHYIETLRQ*STVNQA
Trigger: CGCCTGATTGACAGTGGAGCACTGCCTGAGGGTCTC...AATATAATGTGAATTAGTGTTAAAAAGGGACAGCCACCTTTGCTGTCCGTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp ACAGCCTTGGCTCTGCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCGGTTTAGGAACGATTTaGAAAGGCCATATGTATCTG +
Preference number: 4 (lower is better)
Translates to: TALALLAVLQQCAKRCGIGLGTI*KGHMYL
Trigger: CAGATACATATGGCCTTTGCAAATCGTTCCTAAACC...GATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp CATAGGTGTGAAATGTGCCAGGGAAAACCAGGAAACACAGATGTGCAAGGCATATCCTGGCACAGGACATaGTTCTTCGTCACAAAGATC +
Preference number: 4 (lower is better)
Translates to: HRCEMCQGKPGNTDVQGISWHRT*FFVTKI
Trigger: GATCTTTGTGACGAAGAACCATGTCCTGTGCCAGGA...TATGCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTAACCTGTTTCTTTGCACCTCCTaGCACAGGACATGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FYSSVPRDVGSTEGFSNLFLCTS*HRTWFF
Trigger: GAAGAACCATGTCCTGTGCCAGGAGGTGCAAAGAAA...CAGGTTAGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp ACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCTGAAGAGCCCAGTGAGCTGGATATTCCCTTTTaGGTGTTTCAGCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TIIRSSSVHCTPAEEPSELDIPF*VFQPLL
Trigger: CAGAAGAGGCTGAAACACTCAAAAGGGAATATCCAG...CTCACTGGGCTCTTCAGCTGGTGTACAATGGACAGAGGAACTTCTAATGATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp AAGAAGGCAGAAAAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTCCCTCGCAGCAAGATTaGCAAGTCACTTACACTACA +
Preference number: 4 (lower is better)
Translates to: KKAEKSPETTGKYTTVATPSQQD*QVTYTT
Trigger: TGTAGTGTAAGTGACTTGGCAATCTTGCTGCGAGGG...AGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTTTTCTGCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp ACAGCCTTGGCTCTGCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCTTCATACTTTTCCACTaGAATAGCAGCTTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: TALALLAVLQQCAKRCGIFILFH*NSSFLK
Trigger: TTTGAGGAAGCTGCTATTGCAGTGGAAAAGTATGAA...GATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp CATAGGTGTGAAATGTGCCAGGGAAAACCAGGAAACACAGATGTGCAAGGCATAAGTCTGCCCAAAAGGTaGTTATTCAGGGCTAGTTTC +
Preference number: 4 (lower is better)
Translates to: HRCEMCQGKPGNTDVQGISLPKR*LFRASF
Trigger: GAAACTAGCCCTGAATAAGCACCTTTTGGGCAGACT...TATGCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp GACAACGGACAGCAAAGGTGGCTGTCCCTTTTTAACACTAATTCACATTATATTACAGTGCCTTTGGTATaGACACTGTCCCACCGCCAG +
Preference number: 4 (lower is better)
Translates to: DNGQQRWLSLFNTNSHYITVPLV*TLSHRQ
Trigger: CTGGCGGTGGGACAGTGTGCATACCAAAGGCACTGT...AATATAATGTGAATTAGTGTTAAAAAGGGACAGCCACCTTTGCTGTCCGTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp GACAACGGACAGCAAAGGTGGCTGTCCCTTTTTAACACTAATTCACATTATATTGAAACCCTCCTGATGTaGTCCTGCACCTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: DNGQQRWLSLFNTNSHYIETLLM*SCTFLC
Trigger: GCAGAGGAAGGTGCAGGAGCACATCAGGAGGGTTTC...AATATAATGTGAATTAGTGTTAAAAAGGGACAGCCACCTTTGCTGTCCGTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AAGAAGGCAGAAAAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTATTGGAGACACTCCTTaGCAGCAAGAAAAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: KKAEKSPETTGKYTTVATIGDTP*QQEKPR
Trigger: ACGAGGCTTTTCTTGCTGCCAAGGAGTGTCTCCAAT...AGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTTTTCTGCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp CCAAGGCAAAGGCAAGACCACTTTGGAGTGTGCAGGAAATACCTTCAAATGTTCTGGACCCTCTTTTCCTaGTTCTACTTCCAACCTTCT +
Preference number: 4 (lower is better)
Translates to: PRQRQDHFGVCRKYLQMFWTLFS*FYFQPS
Trigger: AGAAGGTTGGAAGTAGAACCAGGAAAAGAGGGTCCA...GAACATTTGAAGGTATTTCCTGCACACTCCAAAGTGGTCTTGCCTTTGCCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp GCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTGGAGTTTGTGGACATTaGGATCCAGTGGTTTATAGT +
Preference number: 4 (lower is better)
Translates to: ACCFTAVCQEMWDPQRDFGVCGH*DPVVYS
Trigger: ACTATAAACCACTGGATCCCAATGTCCACAAACTCC...AAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TTCTCTTCTGCACCAGCCAGCATTCAGAAGTTTAACAGAGGATGGAATGGTCTGTTTCCAAATCAGTGCTaGGTTGTAGGAACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FSSAPASIQKFNRGWNGLFPNQC*VVGTSP
Trigger: GGGAGAAGTTCCTACAACCCAGCACTGATTTGGAAA...CAGACCATTCCATCCTCTGTTAAACTTCTGAATGCTGGCTGGTGCAGAAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTCAGACAACCAAAGCAACAAGAATCACCTaGTGGGCACCAAATTCGATG +
Preference number: 4 (lower is better)
Translates to: KSPETTGKYTTVATQTTKATRIT*WAPNSM
Trigger: CATCGAATTTGGTGCCCACCAGGTGATTCTTGTTGC...TTTGGTTGTCTGAGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TTCTCTTCTGCACCAGCCAGCATTCAGAAGTTTAACAGAGGATGGAATGGTCTGAGGAGAGCTTGGGAATaGGAAAGGTCTTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FSSAPASIQKFNRGWNGLRRAWE*ERSCSS
Trigger: TGAAGAACAAGACCTTTCCCATTCCCAAGCTCTCCT...CAGACCATTCCATCCTCTGTTAAACTTCTGAATGCTGGCTGGTGCAGAAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AAGAAGGCAGAAAAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTCCAGGTAAAACTGACTaGCAGAATAGGAGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: KKAEKSPETTGKYTTVATPGKTD*QNRRAW
Trigger: CCAAGCTCTCCTATTCTGCCAGTCAGTTTTACCTGG...AGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTTTTCTGCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp CCAAGGCAAAGGCAAGACCACTTTGGAGTGTGCAGGAAATACCTTCAAATGTTCCCTTCTCCTTGGGGCTaGATTTCTTGGATTTCATAT +
Preference number: 4 (lower is better)
Translates to: PRQRQDHFGVCRKYLQMFPSPWG*ISWISY
Trigger: ATATGAAATCCAAGAAATTCAGCCCCAAGGAGAAGG...GAACATTTGAAGGTATTTCCTGCACACTCCAAAGTGGTCTTGCCTTTGCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp GACAACGGACAGCAAAGGTGGCTGTCCCTTTTTAACACTAATTCACATTATATTAACCCCCAGGAGGCATaGGGCCTGAAAATCCTTGTT +
Preference number: 4 (lower is better)
Translates to: DNGQQRWLSLFNTNSHYINPQEA*GLKILV
Trigger: AACAAGGATTTTCAGGCCTCATGCCTCCTGGGGGTT...AATATAATGTGAATTAGTGTTAAAAAGGGACAGCCACCTTTGCTGTCCGTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp ACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCTGAAGAGCCCAGTGAGGCATCTCTAAGCTTCTaGAAGTCTCTCAGGATAATC +
Preference number: 4 (lower is better)
Translates to: TIIRSSSVHCTPAEEPSEASLSF*KSLRII
Trigger: GATTATCCTGAGAGACTTTCAGAAGCTTAGAGATGC...CTCACTGGGCTCTTCAGCTGGTGTACAATGGACAGAGGAACTTCTAATGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp GCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTACTCAAAGCAAGATTTaGCCATTTCCTTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: ACCFTAVCQEMWDPQRDFTQSKI*PFPSQH
Trigger: ATGCTGAGAAGGAAATGGTCAAATCTTGCTTTGAGT...AAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp ACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCTGAAGAGCCCAGTGAGACTTGTAATTTGGCTTaGGGATGTCTTTACAGGCCA +
Preference number: 4 (lower is better)
Translates to: TIIRSSSVHCTPAEEPSETCNLA*GCLYRP
Trigger: TGGCCTGTAAAGACATCCTCAAGCCAAATTACAAGT...CTCACTGGGCTCTTCAGCTGGTGTACAATGGACAGAGGAACTTCTAATGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp ATGGCAGTGATCCACAGAACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAACTCCTGTGCGTTCTTaGCTGACAGGGTCAGAATTT +
Preference number: 4 (lower is better)
Translates to: MAVIHRTIIRSSSVHCTPTPVRS*LTGSEF
Trigger: AAATTCTGACCCTGTCAGTCAAGAACGCACAGGAGT...TGGTGTACAATGGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp AAGAAGGCAGAAAAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTATTGCTTGTCTACTGTaGTTCTGCTGGCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: KKAEKSPETTGKYTTVATIACLL*FCWHSG
Trigger: TCCACTATGCCAGCAGAAGCACAGTAGACAAGCAAT...AGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTTTTCTGCCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp CCAAGGCAAAGGCAAGACCACTTTGGAGTGTGCAGGAAATACCTTCAAATGTTCTTCCTTGCTCTTATTTaGACTCAGGTACTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PRQRQDHFGVCRKYLQMFFLALI*TQVLCS
Trigger: GCTGCAAAGTACCTGAGTGCAAATAAGAGCAAGGAA...GAACATTTGAAGGTATTTCCTGCACACTCCAAAGTGGTCTTGCCTTTGCCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp CATAGGTGTGAAATGTGCCAGGGAAAACCAGGAAACACAGATGTGCAAGGCATAAACTCTGCAAAACAATaGAGTCACTGCTCATCGTTG +
Preference number: 4 (lower is better)
Translates to: HRCEMCQGKPGNTDVQGINSAKQ*SHCSSL
Trigger: CAACGATGAGCAGTGACTCCATTGTTTTGCAGAGTT...TATGCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AAGAAGGCAGAAAAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTGACATGAATGTTGCTTaGCAGCCTGTCTTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: KKAEKSPETTGKYTTVATDMNVA*QPVFLC
Trigger: GCAAAGAAAGACAGGCTGCCAAGCAACATTCATGTC...AGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTTTTCTGCCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp GACAACGGACAGCAAAGGTGGCTGTCCCTTTTTAACACTAATTCACATTATATTCTGTCTCCACAGCACTaGCTGGAGGAAAGTACTCAG +
Preference number: 4 (lower is better)
Translates to: DNGQQRWLSLFNTNSHYILSPQH*LEESTQ
Trigger: CTGAGTACTTTCCTCCAGCCAGTGCTGTGGAGACAG...AATATAATGTGAATTAGTGTTAAAAAGGGACAGCCACCTTTGCTGTCCGTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp ATGGCAGTGATCCACAGAACTATCATTAGAAGTTCCTCTGTCCATTGTACACCACTACTGTGCTTCTGCTaGCATAGTGGAACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: MAVIHRTIIRSSSVHCTPLLCFC*HSGTER
Trigger: TCTCTCTGTTCCACTATGCCAGCAGAAGCACAGTAG...TGGTGTACAATGGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AAGAAGGCAGAAAAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTCATCTGAAAGCATCTTaGAAGCACTGGCTTCGCTTA +
Preference number: 4 (lower is better)
Translates to: KKAEKSPETTGKYTTVATHLKAS*KHWLRL
Trigger: TAAGCGAAGCCAGTGCTTCCAAGATGCTTTCAGATG...AGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTTTTCTGCCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AAGAAGGCAGAAAAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTTTTGGCTTGTACTCTTaGATGATGGAGAACACCTCC +
Preference number: 4 (lower is better)
Translates to: KKAEKSPETTGKYTTVATFGLYS*MMENTS
Trigger: GGAGGTGTTCTCCATCATCCAAGAGTACAAGCCAAA...AGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTTTTCTGCCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp ATGGCAGTGATCCACAGAACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCCAGCTTTTCCAGGTaGCTGTTGATTTTGTCAATC +
Preference number: 4 (lower is better)
Translates to: MAVIHRTIIRSSSVHCTPASFSR*LLILSI
Trigger: GATTGACAAAATCAACAGTCACCTGGAAAAGCTGGC...TGGTGTACAATGGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR TCA 90 bp AAGAAGGCAGAAAAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTAGGAACTTCTCCCTTTaGTCATTTTGGGCCATATCT +
Preference number: 4 (lower is better)
Translates to: KKAEKSPETTGKYTTVATRNFSL*SFWAIS
Trigger: AGATATGGCCCAAAATGATCAAAGGGAGAAGTTCCT...AGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTTTTCTGCCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp ACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCTGAAGAGCCCAGTGAGATAGCAGAGATCGAGTaGTTCTCTCAGAATAACCTT +
Preference number: 4 (lower is better)
Translates to: TIIRSSSVHCTPAEEPSEIAEIE*FSQNNL
Trigger: AAGGTTATTCTGAGAGAAGCACTCGATCTCTGCTAT...CTCACTGGGCTCTTCAGCTGGTGTACAATGGACAGAGGAACTTCTAATGATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp GACAACGGACAGCAAAGGTGGCTGTCCCTTTTTAACACTAATTCACATTATATTTTTTTGACTGAACCATaGACTTGGCCTCACAGCGCC +
Preference number: 4 (lower is better)
Translates to: DNGQQRWLSLFNTNSHYIFLTEP*TWPHSA
Trigger: GGCGCTGTGAGGCCAAGTGCATGGTTCAGTCAAAAA...AATATAATGTGAATTAGTGTTAAAAAGGGACAGCCACCTTTGCTGTCCGTTGTC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AAGAAGGCAGAAAAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTTTGGTACTGAAGCTGTaGAACTTCATGATGCTGTAC +
Preference number: 4 (lower is better)
Translates to: KKAEKSPETTGKYTTVATLVLKL*NFMMLY
Trigger: GTACAGCATCATGAAGTTCCACAGCTTCAGTACCAA...AGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTTTTCTGCCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp GACAACGGACAGCAAAGGTGGCTGTCCCTTTTTAACACTAATTCACATTATATTTCATCCCTCAGGTCCTaGAGTTTGTGGACATTGGGA +
Preference number: 4 (lower is better)
Translates to: DNGQQRWLSLFNTNSHYISSLRS*SLWTLG
Trigger: TCCCAATGTCCACAAACTCCAGGACCTGAGGGATGA...AATATAATGTGAATTAGTGTTAAAAAGGGACAGCCACCTTTGCTGTCCGTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp ATGGCAGTGATCCACAGAACTATCATTAGAAGTTCCTCTGTCCATTGTACACCACAAACTCCAGCCCTTTaGCCTCATAAACAGTTAGCA +
Preference number: 4 (lower is better)
Translates to: MAVIHRTIIRSSSVHCTPQTPAL*PHKQLA
Trigger: TGCTAACTGTTTATGAGGCCAAAGGGCTGGAGTTTG...TGGTGTACAATGGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp AAGAAGGCAGAAAAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTTCTGGTCACATCCTTTaGCTTGTACTCTTGGATGAT +
Preference number: 4 (lower is better)
Translates to: KKAEKSPETTGKYTTVATSGHIL*LVLLDD
Trigger: ATCATCCAAGAGTACAAGCCAAAGGATGTGACCAGA...AGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTTTTCTGCCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
3UTR CAA 72 bp CATCTACACAATAGCCAAGGCAAAGGCAAGACCACTTaGGAGTGTGCAGGAAATACCTTCAAATGTTCATTG +
Preference number: 4 (lower is better)
Translates to: HLHNSQGKGKTT*ECAGNTFKCSL
Trigger: CAATGAACATTTGAAGGTATTTCCTGCACACTCCAAAGTGGTCTTGCCTTTGCCTTGGCTATTGTGTAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp ACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCTGAAGAGCCCAGTGAGTGGAAATCTTCACACTaGTCATCCTCACATTTCAAA +
Preference number: 4 (lower is better)
Translates to: TIIRSSSVHCTPAEEPSEWKSSH*SSSHFK
Trigger: TTTGAAATGTGAGGATGAGCAGTGTGAAGATTTCCA...CTCACTGGGCTCTTCAGCTGGTGTACAATGGACAGAGGAACTTCTAATGATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTTTTGCTTCAAAGAGCTaGATATTCCCTTTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: LLFYSSVPRDVGSTEGFSFASKS*IFPFEC
Trigger: ACACTCAAAAGGGAATATCCAGCTCTTTGAAGCAAA...AGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp GACAACGGACAGCAAAGGTGGCTGTCCCTTTTTAACACTAATTCACATTATATTTTGGCAAGATCTGTTTaGACAGCAATGGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: DNGQQRWLSLFNTNSHYILARSV*TAMGFL
Trigger: CAGGAAGCCCATTGCTGTCCAAACAGATCTTGCCAA...AATATAATGTGAATTAGTGTTAAAAAGGGACAGCCACCTTTGCTGTCCGTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp TTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTAACCTGTGGACCATCCTACAATaGTTCTTTTTAAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: FYSSVPRDVGSTEGFSNLWTILQ*FFLSFH
Trigger: ATGGAAGCTTAAAAAGAACCATTGTAGGATGGTCCA...CAGGTTAGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR GCA 90 bp ATGGCAGTGATCCACAGAACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAACCTTTGTCCAGCTTTaGTTCAAAGAGCTGGATATT +
Preference number: 4 (lower is better)
Translates to: MAVIHRTIIRSSSVHCTPTFVQL*FKELDI
Trigger: AATATCCAGCTCTTTGAAGCAAAGCTGGACAAAGGT...TGGTGTACAATGGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp ATGGCAGTGATCCACAGAACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAAAATTATTCTTAATATaGGCCCTGGGTCATTCTGGG +
Preference number: 4 (lower is better)
Translates to: MAVIHRTIIRSSSVHCTPKLFLI*ALGHSG
Trigger: CCCAGAATGACCCAGGGCCCATATTAAGAATAATTT...TGGTGTACAATGGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CCA 90 bp GACAACGGACAGCAAAGGTGGCTGTCCCTTTTTAACACTAATTCACATTATATTTTCCCAACTGCTGGATaGCAAGGATTATTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: DNGQQRWLSLFNTNSHYIFPTAG*QGLFSS
Trigger: AGAAGAAAATAATCCTTGCCATCCAGCAGTTGGGAA...AATATAATGTGAATTAGTGTTAAAAAGGGACAGCCACCTTTGCTGTCCGTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp CGCGCGGGTCCCACATGGCCGGGACTCGCCGCCGCCGCCTCGGGATaGGCGCAGGTGACACCGAGGCCCCGCGTTCCGAGGCCGGGGCCA +
Preference number: 5 (lower is better)
Translates to: RAGPTWPGLAAAASG*AQVTPRPRVPRPGP
Trigger: TGGCCCCGGCCTCGGAACGCGGGGCCTCGGTGTCACCTGCGCGCATCCCGAGGCGGCGGCGGCGAGTCCCGGCCATGTGGGACCCGCGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp GGGGCCAGGCGGAAAGCTGCTTCCCGCGGCTCGTGCGGGACCGGCTaGGGGAGCGCCGCGCAGGCCGAGTCCGTGCTCCCACGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: GARRKAASRGSCGTG*GSAAQAESVLPRGC
Trigger: GCAGCCGCGTGGGAGCACGGACTCGGCCTGCGCGGCGCTCCCGCAGCCGGTCCCGCACGAGCCGCGGGAAGCAGCTTTCCGCCTGGCCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp CCACATGGCCGGGACTCGCCGCCGCCGCCTCGGGATGCGCGCAGGTaGCACCGAGGCCCCGCGTTCCGAGGCCGGGGCCAGGCGGAAAGC +
Preference number: 5 (lower is better)
Translates to: PHGRDSPPPPRDARR*HRGPAFRGRGQAES
Trigger: GCTTTCCGCCTGGCCCCGGCCTCGGAACGCGGGGCCTCGGTGTCACCTGCGCGCATCCCGAGGCGGCGGCGGCGAGTCCCGGCCATGTGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp AGCAGCCTCTTGGGCACCTGGCCCGGCCAATCCATGCTCATCAGCTaGAGCCTTGTCTGGATCTCCCGGAAGTGGCGGAAGAGAAGCGGC +
Preference number: 5 (lower is better)
Translates to: SSLLGTWPGQSMLIS*SLVWISRKWRKRSG
Trigger: GCCGCTTCTCTTCCGCCACTTCCGGGAGATCCAGACAAGGCTGCAGCTGATGAGCATGGATTGGCCGGGCCAGGTGCCCAAGAGGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp GGGGCAGAAGATCTGGAGAGCCTCCCCAGGTGGGCAGCTGGGTCTTaGCGGTTCTTCCGCCTGCTCTCTGTCAGCGCTTTGTTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: GAEDLESLPRWAAGS*RFFRLLSVSALFQA
Trigger: GGCTTGGAACAAAGCGCTGACAGAGAGCAGGCGGAAGAACCGCCAAGACCCAGCTGCCCACCTGGGGAGGCTCTCCAGATCTTCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp ATGGCCAGGGGCAGAAGATCTGGAGAGCCTCCCCAGGTGGGCAGCTaGGTCTTGGCGGTTCTTCCGCCTGCTCTCTGTCAGCGCTTTGTT +
Preference number: 5 (lower is better)
Translates to: MARGRRSGEPPQVGS*VLAVLPPALCQRFV
Trigger: AACAAAGCGCTGACAGAGAGCAGGCGGAAGAACCGCCAAGACCCAGCTGCCCACCTGGGGAGGCTCTCCAGATCTTCTGCCCCTGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp GGCACCTGGCCCGGCCAATCCATGCTCATCAGCTGCAGCCTTGTCTaGATCTCCCGGAAGTGGCGGAAGAGAAGCGGCTTGCAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: GTWPGQSMLISCSLV*ISRKWRKRSGLQKG
Trigger: GCCTTTCTGCAAGCCGCTTCTCTTCCGCCACTTCCGGGAGATCCAGACAAGGCTGCAGCTGATGAGCATGGATTGGCCGGGCCAGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp CTGACCTCCTCATGGCAGAGGCCACGGACCACAGTGCCTTTGGTATaGACACTGTCCCACCGCCAGTGGCAATCCACCAGGTACTCCTCG +
Preference number: 5 (lower is better)
Translates to: LTSSWQRPRTTVPLV*TLSHRQWQSTRYSS
Trigger: CGAGGAGTACCTGGTGGATTGCCACTGGCGGTGGGACAGTGTGCATACCAAAGGCACTGTGGTCCGTGGCCTCTGCCATGAGGAGGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp TCCTCGTGTCTCAGGCACATGAGCAGCGGCCTGTCCTGGCTGTCTTaGAGACCCTCAGGCAGTGCTCCACTGTCAATCAGGCGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: SSCLRHMSSGLSWLS*RPSGSAPLSIRRLR
Trigger: TCTGAGCCGCCTGATTGACAGTGGAGCACTGCCTGAGGGTCTCCAAGACAGCCAGGACAGGCCGCTGCTCATGTGCCTGAGACACGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp TCCATGGGGCCCGTACAGAGCAGGCGGTTCAGTCTGACCTCCTCATaGCAGAGGCCACGGACCACAGTGCCTTTGGTATGCACACTGTCC +
Preference number: 5 (lower is better)
Translates to: SMGPVQSRRFSLTSS*QRPRTTVPLVCTLS
Trigger: GGACAGTGTGCATACCAAAGGCACTGTGGTCCGTGGCCTCTGCCATGAGGAGGTCAGACTGAACCGCCTGCTCTGTACGGGCCCCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp TCTCTGGCCACATTGAAGCGGGCAACCCCCAGGAGGCATGAGGCCTaGAAATCCTTGTTGGCAGTGAGCCTGGCAGCCTCCAGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: SLATLKRATPRRHEA*KSLLAVSLAASRRQ
Trigger: CTGCCTTCTGGAGGCTGCCAGGCTCACTGCCAACAAGGATTTTCAGGCCTCATGCCTCCTGGGGGTTGCCCGCTTCAATGTGGCCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp CAGCAAACTGGTCCATGGGGCCCGTACAGAGCAGGCGGTTCAGTCTaGCCTCCTCATGGCAGAGGCCACGGACCACAGTGCCTTTGGTAT +
Preference number: 5 (lower is better)
Translates to: QQTGPWGPYRAGGSV*PPHGRGHGPQCLWY
Trigger: ATACCAAAGGCACTGTGGTCCGTGGCCTCTGCCATGAGGAGGTCAGACTGAACCGCCTGCTCTGTACGGGCCCCATGGACCAGTTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp TGCACCTTCCTCTGCAGCATGTGGCTCTGCTCCTTGGAGCCCAGGTaGCTACGGATCCAGACGCTCTGCTCAATGCCCTGCACCACCACT +
Preference number: 5 (lower is better)
Translates to: CTFLCSMWLCSLEPR*LRIQTLCSMPCTTT
Trigger: AGTGGTGGTGCAGGGCATTGAGCAGAGCGTCTGGATCCGTAGTCACCTGGGCTCCAAGGAGCAGAGCCACATGCTGCAGAGGAAGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp AGAGCCTCCCCAGGTGGGCAGCTGGGTCTTGGCGGTTCTTCCGCCTaGTCTCTGTCAGCGCTTTGTTCCAAGCCAAAAGCAGAGCATCGT +
Preference number: 5 (lower is better)
Translates to: RASPGGQLGLGGSSA*SLSALCSKPKAEHR
Trigger: ACGATGCTCTGCTTTTGGCTTGGAACAAAGCGCTGACAGAGAGCAGGCGGAAGAACCGCCAAGACCCAGCTGCCCACCTGGGGAGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp CCCACCTCCTCCAGCGGATGCACAGAGACACCACTAGGCAGACTCTaGGCAGCTTGCGCTGGATCAAGGCCTTTCGCTGCTTCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: PTSSSGCTETPLGRL*AACAGSRPFAASGK
Trigger: TTTCCCAGAAGCAGCGAAAGGCCTTGATCCAGCGCAAGCTGCGCAGAGTCTGCCTAGTGGTGTCTCTGTGCATCCGCTGGAGGAGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp TATCCTCTCTGCTGTGCTCTGTCTGGACCCACCTCCTCCAGCGGATaGACAGAGACACCACTAGGCAGACTCTGCGCAGCTTGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: YPLCCALSGPTSSSG*TETPLGRLCAACAG
Trigger: TCCAGCGCAAGCTGCGCAGAGTCTGCCTAGTGGTGTCTCTGTGCATCCGCTGGAGGAGGTGGGTCCAGACAGAGCACAGCAGAGAGGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp TCTCAAAGTCCTCTGGGTAGCTGGAGGACAGAAGGAAGGCCTGCATaGCACTCAGCCACAGGTCTGTGGACTCCCTGCGGCTGTGTGCAC +
Preference number: 5 (lower is better)
Translates to: SQSPLGSWRTEGRPA*HSATGLWTPCGCVH
Trigger: GTGCACACAGCCGCAGGGAGTCCACAGACCTGTGGCTGAGTGCCATGCAGGCCTTCCTTCTGTCCTCCAGCTACCCAGAGGACTTTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp GGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTACCTCCCACCTAACTGGCCTGTCCTGGCTGTCTaGGAGACCCTCAGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: GLGQRSPSTPFNYLPPNWPVLAV*ETLRQC
Trigger: GCACTGCCTGAGGGTCTCCAAGACAGCCAGGACAGG...CCAGTTAGGTGGGAGGTAGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp TCTTTCTTTCCTTCTGTGCCAGCTGCTACCTTGGGAGAGTCTCGCTaGGGAGAGTCCTCGGGGAGAGGCATACCCAGCTCCACCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SFFPSVPAATLGESR*GESSGRGIPSSTCW
Trigger: CCAGCAGGTGGAGCTGGGTATGCCTCTCCCCGAGGACTCTCCTCAGCGAGACTCTCCCAAGGTAGCAGCTGGCACAGAAGGAAAGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp GTCAGAATCTCTGGCCACATTGAAGCGGGCAACCCCCAGGAGGCATaGGGCCTGAAAATCCTTGTTGGCAGTGAGCCTGGCAGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: VRISGHIEAGNPQEA*GLKILVGSEPGSLQ
Trigger: CTGGAGGCTGCCAGGCTCACTGCCAACAAGGATTTTCAGGCCTCATGCCTCCTGGGGGTTGCCCGCTTCAATGTGGCCAGAGATTCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp GCCTCCGGTGGCCTTCCAGGCGAATGTGCTGCTCATAAGACTCACTaGTTCTCTCTCGGCACTCCCTCCCCTCCAGTTCAGCCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: ASGGLPGECAAHKTH*FSLGTPSPPVQPWK
Trigger: TTTCCAGGGCTGAACTGGAGGGGAGGGAGTGCCGAGAGAGAATCAGTGAGTCTTATGAGCAGCACATTCGCCTGGAAGGCCACCGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp TCCAGCGGATGCACAGAGACACCACTAGGCAGACTCTGCGCAGCTTaGGCTGGATCAAGGCCTTTCGCTGCTTCTGGGAAAGGATGGCAG +
Preference number: 5 (lower is better)
Translates to: SSGCTETPLGRLCAA*AGSRPFAASGKGWQ
Trigger: CTGCCATCCTTTCCCAGAAGCAGCGAAAGGCCTTGATCCAGCGCAAGCTGCGCAGAGTCTGCCTAGTGGTGTCTCTGTGCATCCGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp CGGATGCACAGAGACACCACTAGGCAGACTCTGCGCAGCTTGCGCTaGATCAAGGCCTTTCGCTGCTTCTGGGAAAGGATGGCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: RMHRDTTRQTLRSLR*IKAFRCFWERMAAR
Trigger: TCTGGCTGCCATCCTTTCCCAGAAGCAGCGAAAGGCCTTGATCCAGCGCAAGCTGCGCAGAGTCTGCCTAGTGGTGTCTCTGTGCATCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp GTTTGTCGCCTGCTGGTGTACCCTGGGAAGTGGGCAGCAGCGACATaGAGGACAGTGCAGCCAGCATCGTCTCTGTGGTTGATGTGTTCT +
Preference number: 5 (lower is better)
Translates to: VCRLLVYPGKWAAAT*RTVQPASSLWLMCS
Trigger: AGAACACATCAACCACAGAGACGATGCTGGCTGCACTGTCCTGCATGTCGCTGCTGCCCACTTCCCAGGGTACACCAGCAGGCGACAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp CTGCTCCAAAGCTCAGCAGCATCTGCACATCTTCAGTTTGTCGCCTaGTGGTGTACCCTGGGAAGTGGGCAGCAGCGACATGCAGGACAG +
Preference number: 5 (lower is better)
Translates to: LLQSSAASAHLQFVA*WCTLGSGQQRHAGQ
Trigger: CTGTCCTGCATGTCGCTGCTGCCCACTTCCCAGGGTACACCAGCAGGCGACAAACTGAAGATGTGCAGATGCTGCTGAGCTTTGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp TGCCAAACTTCCCTTCTATGCCTCTCACTCTGCTGCCTCGACCCCTaGCTCTGTCCTCTCTGTCAGACTCGAGCACTTTCAGCTCCCGGT +
Preference number: 5 (lower is better)
Translates to: CQTSLLCLSLCCLDP*LCPLCQTRALSAPG
Trigger: ACCGGGAGCTGAAAGTGCTCGAGTCTGACAGAGAGGACAGAGGCAGGGGTCGAGGCAGCAGAGTGAGAGGCATAGAAGGGAAGTTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp TGGATCTCCCGGAAGTGGCGGAAGAGAAGCGGCTTGCAGAAAGGCTaGAGGACTTCCTCAGCATTCACCAGCATCACCAAGCACAGCACC +
Preference number: 5 (lower is better)
Translates to: WISRKWRKRSGLQKG*RTSSAFTSITKHST
Trigger: GGTGCTGTGCTTGGTGATGCTGGTGAATGCTGAGGAAGTCCTGCAGCCTTTCTGCAAGCCGCTTCTCTTCCGCCACTTCCGGGAGATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp ATCTGCACATCTTCAGTTTGTCGCCTGCTGGTGTACCCTGGGAAGTaGGCAGCAGCGACATGCAGGACAGTGCAGCCAGCATCGTCTCTG +
Preference number: 5 (lower is better)
Translates to: ICTSSVCRLLVYPGK*AAATCRTVQPASSL
Trigger: CAGAGACGATGCTGGCTGCACTGTCCTGCATGTCGCTGCTGCCCACTTCCCAGGGTACACCAGCAGGCGACAAACTGAAGATGTGCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp AGACCCTCAGGCAGTGCTCCACTGTCAATCAGGCGGCTCAGAAGCTaGGTCTTCCTCTGGTCCCAGGAGCTGAGATGGGGAATGACAGTA +
Preference number: 5 (lower is better)
Translates to: RPSGSAPLSIRRLRS*VFLWSQELRWGMTV
Trigger: TACTGTCATTCCCCATCTCAGCTCCTGGGACCAGAGGAAGACCCAGCTTCTGAGCCGCCTGATTGACAGTGGAGCACTGCCTGAGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp GGGAATGCAGGCCTCATGCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTCTTTCCAGTAAGAATTaGATGAAGGTGGTGGCACAG +
Preference number: 5 (lower is better)
Translates to: GNAGLMQPPGRAYRPHGSLSSKN*MKVVAQ
Trigger: CTGTGCCACCACCTTCATCAAATTCTTACTGGAAAG...ACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGCATGAGGCCTGCATTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp GGGAATGCAGGCCTCATGCAGCCCCCTGGCAGGGCCTACAGGCCACATGGCAGTATGTTTAAGGCCATGTaGGTACTGAAGCTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: GNAGLMQPPGRAYRPHGSMFKAM*VLKLWN
Trigger: GTTCCACAGCTTCAGTACCAACATGGCCTTAAACAT...ACTGCCATGTGGCCTGTAGGCCCTGCCAGGGGGCTGCATGAGGCCTGCATTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp TTCTGTGGGAGGCAAAGCCCCAGAGACCGGCGTGAACCTGGGCTGAGTGGGGAACTCAAAAAGCTCCTCTaGGCAGTACATTCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: FCGRQSPRDRREPGLSGELKKLL*AVHSEG
Trigger: GCCCTCAGAATGTACTGCCAAGAGGAGCTTTTTGAG...TTCCCCACTCAGCCCAGGTTCACGCCGGTCTCTGGGGCTTTGCCTCCCACAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp TCCAGGTCCGAGAGGTCACAATCCTTGATGACGCCATTTCTGAGCTaGGGCTGCCCGCTGACTTTGCGGGTGAGCAGCAGAAGCACTTCA +
Preference number: 5 (lower is better)
Translates to: SRSERSQSLMTPFLS*GCPLTLRVSSRSTS
Trigger: TGAAGTGCTTCTGCTGCTCACCCGCAAAGTCAGCGGGCAGCCTCAGCTCAGAAATGGCGTCATCAAGGATTGTGACCTCTCGGACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp GGGCAACCCCCAGGAGGCATGAGGCCTGAAAATCCTTGTTGGCAGTaGGCCTGGCAGCCTCCAGAAGGCAGCCATGTTGCTTCATCAATA +
Preference number: 5 (lower is better)
Translates to: GQPPGGMRPENPCWQ*AWQPPEGSHVASSI
Trigger: TATTGATGAAGCAACATGGCTGCCTTCTGGAGGCTGCCAGGCTCACTGCCAACAAGGATTTTCAGGCCTCATGCCTCCTGGGGGTTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp CTTGGCCTCCAGAAGCAACCCGTTGATTGCAACCAGGTGCATTTTTaGCTGAACCATGCACTTGGCCTCACAGCGCCTGAGGGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: LGLQKQPVDCNQVHF*LNHALGLTAPEGPV
Trigger: CACAGGCCCCTCAGGCGCTGTGAGGCCAAGTGCATGGTTCAGTCAAAAATGCACCTGGTTGCAATCAACGGGTTGCTTCTGGAGGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp TGGGCACCAACATGCCAAACTTCCCTTCTATGCCTCTCACTCTGCTaGCTCGACCCCTGCCTCTGTCCTCTCTGTCAGACTCGAGCACTT +
Preference number: 5 (lower is better)
Translates to: WAPTCQTSLLCLSLC*LDPCLCPLCQTRAL
Trigger: AAGTGCTCGAGTCTGACAGAGAGGACAGAGGCAGGGGTCGAGGCAGCAGAGTGAGAGGCATAGAAGGGAAGTTTGGCATGTTGGTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp TGTTGGGCACCAACATGCCAAACTTCCCTTCTATGCCTCTCACTCTaGTGCCTCGACCCCTGCCTCTGTCCTCTCTGTCAGACTCGAGCA +
Preference number: 5 (lower is better)
Translates to: CWAPTCQTSLLCLSL*CLDPCLCPLCQTRA
Trigger: TGCTCGAGTCTGACAGAGAGGACAGAGGCAGGGGTCGAGGCAGCAGAGTGAGAGGCATAGAAGGGAAGTTTGGCATGTTGGTGCCCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp GCATTCTTCCAGAGGCGGGTCAGTACCACCCCACAGTGCACAAACTaGAGCTCCAGCAGCACCACTGTATTGATAATGCTGGGGACCAGC +
Preference number: 5 (lower is better)
Translates to: AFFQRRVSTTPQCTN*SSSSTTVLIMLGTS
Trigger: GCTGGTCCCCAGCATTATCAATACAGTGGTGCTGCTGGAGCTGCAGTTTGTGCACTGTGGGGTGGTACTGACCCGCCTCTGGAAGAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp AGTGCTCCACTGTCAATCAGGCGGCTCAGAAGCTGGGTCTTCCTCTaGTCCCAGGAGCTGAGATGGGGAATGACAGTACAGATGTCCAGG +
Preference number: 5 (lower is better)
Translates to: SAPLSIRRLRSWVFL*SQELRWGMTVQMSR
Trigger: CCTGGACATCTGTACTGTCATTCCCCATCTCAGCTCCTGGGACCAGAGGAAGACCCAGCTTCTGAGCCGCCTGATTGACAGTGGAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp TGCCGTACAGAAACTCCCAGAAGTGCAGGAGTGCGATGTAGCTCTTaGGGAGGCACAGGACAGCATTCTTCCAGAGGCGGGTCAGTACCA +
Preference number: 5 (lower is better)
Translates to: CRTETPRSAGVRCSS*GGTGQHSSRGGSVP
Trigger: TGGTACTGACCCGCCTCTGGAAGAATGCTGTCCTGTGCCTCCCCAAGAGCTACATCGCACTCCTGCACTTCTGGGAGTTTCTGTACGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp CAATCCATGCTCATCAGCTGCAGCCTTGTCTGGATCTCCCGGAAGTaGCGGAAGAGAAGCGGCTTGCAGAAAGGCTGCAGGACTTCCTCA +
Preference number: 5 (lower is better)
Translates to: QSMLISCSLVWISRK*RKRSGLQKGCRTSS
Trigger: TGAGGAAGTCCTGCAGCCTTTCTGCAAGCCGCTTCTCTTCCGCCACTTCCGGGAGATCCAGACAAGGCTGCAGCTGATGAGCATGGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp CAGACTCTGCGCAGCTTGCGCTGGATCAAGGCCTTTCGCTGCTTCTaGGAAAGGATGGCAGCCAGAAAATTATCTCGGTCTTCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: QTLRSLRWIKAFRCF*ERMAARKLSRSSWA
Trigger: GGCCCAGGAAGACCGAGATAATTTTCTGGCTGCCATCCTTTCCCAGAAGCAGCGAAAGGCCTTGATCCAGCGCAAGCTGCGCAGAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp CAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAGACCCGGACCACAGTGCCTTaGGTATGCACACTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: QQQHGRKAGSVGGKAPETRTTVP*VCTLSH
Trigger: GTGGGACAGTGTGCATACCAAAGGCACTGTGGTCCG...GGTCTCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp GCCTCCAGAAGCAACCCGTTGATTGCAACCAGGTGCATTTTTGACTaGACCATGCACTTGGCCTCACAGCGCCTGAGGGGCCTGTGGAAA +
Preference number: 5 (lower is better)
Translates to: ASRSNPLIATRCIFD*TMHLASQRLRGLWK
Trigger: TTTCCACAGGCCCCTCAGGCGCTGTGAGGCCAAGTGCATGGTTCAGTCAAAAATGCACCTGGTTGCAATCAACGGGTTGCTTCTGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp TCCTGCGAACATAGAGCTGGTCCATGGAACTCTCCAGCAGCCGGATaGAGCACAGGTAGGACTTCTCCACGTTCTCATCCTCCCTGTTGG +
Preference number: 5 (lower is better)
Translates to: SCEHRAGPWNSPAAG*STGRTSPRSHPPCW
Trigger: CCAACAGGGAGGATGAGAACGTGGAGAAGTCCTACCTGTGCTTCATCCGGCTGCTGGAGAGTTCCATGGACCAGCTCTATGTTCGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp CTCAGGCTTTTGATCCATTACCCACCGGAAAAGCTGACTTTCCCTTaGTTGGATGCAGAGCCGCATAAGGGCATGGAGAGGGTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: LRLLIHYPPEKLTFP*LDAEPHKGMERVGP
Trigger: GGGCCCAACCCTCTCCATGCCCTTATGCGGCTCTGCATCCAAGCAAGGGAAAGTCAGCTTTTCCGGTGGGTAATGGATCAAAAGCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp CCTGCTGGCTCCACTGTGGCTCCTCCTGCACAGGCTTCACTCTCTTaGTCCTCATCTATACCATCCACCGTTTCCACTTTGATGGAACCC +
Preference number: 5 (lower is better)
Translates to: PAGSTVAPPAQASLS*SSSIPSTVSTLMEP
Trigger: GGGTTCCATCAAAGTGGAAACGGTGGATGGTATAGATGAGGAGCAAGAGAGTGAAGCCTGTGCAGGAGGAGCCACAGTGGAGCCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp GAAGGAAGGCCTGCATGGCACTCAGCCACAGGTCTGTGGACTCCCTaGGGCTGTGTGCACTCTCTTTCTGAAACAGGTCATGGATGTACT +
Preference number: 5 (lower is better)
Translates to: EGRPAWHSATGLWTP*GCVHSLSETGHGCT
Trigger: AGTACATCCATGACCTGTTTCAGAAAGAGAGTGCACACAGCCGCAGGGAGTCCACAGACCTGTGGCTGAGTGCCATGCAGGCCTTCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp TTCCCGGTCCTTCTTGCCGTACAGAAACTCCCAGAAGTGCAGGAGTaGGATGTAGCTCTTGGGGAGGCACAGGACAGCATTCTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: FPVLLAVQKLPEVQE*DVALGEAQDSILPE
Trigger: CTCTGGAAGAATGCTGTCCTGTGCCTCCCCAAGAGCTACATCGCACTCCTGCACTTCTGGGAGTTTCTGTACGGCAAGAAGGACCGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp CGGAAGTCCCGGATAGCTCTGGTCACATCCTTTGGCTTGTACTCTTaGATGATGGAGAACACCTCCCCAGATTCCCGGTCCTTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: RKSRIALVTSFGLYS*MMENTSPDSRSFLP
Trigger: CGGCAAGAAGGACCGGGAATCTGGGGAGGTGTTCTCCATCATCCAAGAGTACAAGCCAAAGGATGTGACCAGAGCTATCCGGGACTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp GGACAGGTGGAACCGGAAGTCCCGGATAGCTCTGGTCACATCCTTTaGCTTGTACTCTTGGATGATGGAGAACACCTCCCCAGATTCCCG +
Preference number: 5 (lower is better)
Translates to: GQVEPEVPDSSGHIL*LVLLDDGEHLPRFP
Trigger: CGGGAATCTGGGGAGGTGTTCTCCATCATCCAAGAGTACAAGCCAAAGGATGTGACCAGAGCTATCCGGGACTTCCGGTTCCACCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp CAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAGACCAGGGCATGGAGAGGGTaGGGCCCTATGGTTTCAATG +
Preference number: 5 (lower is better)
Translates to: QQQHGRKAGSVGGKAPETRAWRG*GPMVSM
Trigger: CATTGAAACCATAGGGCCCAACCCTCTCCATGCCCT...GGTCTCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp CCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCTCAAAGATCCAAAGGTaGACCCGAGCCCGAGTGATG +
Preference number: 5 (lower is better)
Translates to: PKGRAWTQGSLMARCTLGSKIQR*TRARVM
Trigger: CATCACTCGGGCTCGGGTCAACCTTTGGATCTTTGA...GCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp AATGCCTACTCCCCTGCTACAGTGGTTATGAGCCCAGGAGCCTGGCTTGGGGCATGCAGCTCCTTCTCCTaGGGGCTGAATTTCTTGGAT +
Preference number: 5 (lower is better)
Translates to: NAYSPATVVMSPGAWLGACSSFS*GLNFLD
Trigger: ATCCAAGAAATTCAGCCCCAAGGAGAAGGAGCTGCA...TGCCCCAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAGGGGAGTAGGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp CCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCTTCTCATCCTCCCTGTaGGGCACCAACATGCCAAAC +
Preference number: 5 (lower is better)
Translates to: PKGRAWTQGSLMARCTLGFSSSL*GTNMPN
Trigger: GTTTGGCATGTTGGTGCCCAACAGGGAGGATGAGAA...GCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp CAGACAACCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTCATCAGCTGCAGCCTaGTCTGGATCTCCCGGAAGT +
Preference number: 5 (lower is better)
Translates to: QTTKRESLDSGVAYGKVYSSAAA*SGSPGS
Trigger: ACTTCCGGGAGATCCAGACAAGGCTGCAGCTGATGA...GTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGGTTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp TCAAGAGAAGAAAAGCTAAGTCAAAGTCCTCGTGTCTCAGGCACATaGGCAGCGGCCTGTCCTGGCTGTCTTGGAGACCCTCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: SREEKLSQSPRVSGT*AAACPGCLGDPQAV
Trigger: CACTGCCTGAGGGTCTCCAAGACAGCCAGGACAGGCCGCTGCTCATGTGCCTGAGACACGAGGACTTTGACTTAGCTTTTCTTCTCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp GAGGCAACAGGGTTGTTTCCGCTGCAGCCAGAGCTCCCCATCCTCTaGGTTCTCTGGAGTTTGTCTTTCTTTCCTTCTGTGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: EATGLFPLQPELPIL*VLWSLSFFPSVPAA
Trigger: AGCAGCTGGCACAGAAGGAAAGAAAGACAAACTCCAGAGAACTCAGAGGATGGGGAGCTCTGGCTGCAGCGGAAACAACCCTGTTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp GAATCTCATCACCATAAAGCTCATGGATGGACCAGGGGAGCACCCTaGGCTTCGACAGCCTCCAGGACAGGTTGTACAGGACGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: ESHHHKAHGWTRGAP*ASTASRTGCTGRPL
Trigger: AAGAGGACGTCCTGTACAACCTGTCCTGGAGGCTGTCGAAGCTCAGGGTGCTCCCCTGGTCCATCCATGAGCTTTATGGTGATGAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp AGCCACAGGTCTGTGGACTCCCTGCGGCTGTGTGCACTCTCTTTCTaGAACAGGTCATGGATGTACTCTTTCAAGGCACACCGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: SHRSVDSLRLCALSF*NRSWMYSFKAHRKE
Trigger: CTCCTTCCGGTGTGCCTTGAAAGAGTACATCCATGACCTGTTTCAGAAAGAGAGTGCACACAGCCGCAGGGAGTCCACAGACCTGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp CCGCATAAGGGCATGGAGAGGGTTGGGCCCTATGGTTTCAATGTTTaGACCGATGGAGACGAGCCACTGAACCAACTTGGGCACTTGTTC +
Preference number: 5 (lower is better)
Translates to: PHKGMERVGPYGFNV*TDGDEPLNQLGHLF
Trigger: GAACAAGTGCCCAAGTTGGTTCAGTGGCTCGTCTCCATCGGTGCAAACATTGAAACCATAGGGCCCAACCCTCTCCATGCCCTTATGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp TCCCCATCCTCTGAGTTCTCTGGAGTTTGTCTTTCTTTCCTTCTGTaGCAGCTGCTACCTTGGGAGAGTCTCGCTGAGGAGAGTCCTCGG +
Preference number: 5 (lower is better)
Translates to: SPSSEFSGVCLSFLL*QLLPWESLAEESPR
Trigger: CCGAGGACTCTCCTCAGCGAGACTCTCCCAAGGTAGCAGCTGGCACAGAAGGAAAGAAAGACAAACTCCAGAGAACTCAGAGGATGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp CTGCATGGCACTCAGCCACAGGTCTGTGGACTCCCTGCGGCTGTGTaGACTCTCTTTCTGAAACAGGTCATGGATGTACTCTTTCAAGGC +
Preference number: 5 (lower is better)
Translates to: LHGTQPQVCGLPAAV*TLFLKQVMDVLFQG
Trigger: GCCTTGAAAGAGTACATCCATGACCTGTTTCAGAAAGAGAGTGCACACAGCCGCAGGGAGTCCACAGACCTGTGGCTGAGTGCCATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp CACAGGACAGCATTCTTCCAGAGGCGGGTCAGTACCACCCCACAGTaGACAAACTGCAGCTCCAGCAGCACCACTGTATTGATAATGCTG +
Preference number: 5 (lower is better)
Translates to: HRTAFFQRRVSTTPQ*TNCSSSSTTVLIML
Trigger: CAGCATTATCAATACAGTGGTGCTGCTGGAGCTGCAGTTTGTGCACTGTGGGGTGGTACTGACCCGCCTCTGGAAGAATGCTGTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp ACTAGGCAGACTCTGCGCAGCTTGCGCTGGATCAAGGCCTTTCGCTaGTTCTGGGAAAGGATGGCAGCCAGAAAATTATCTCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: TRQTLRSLRWIKAFR*FWERMAARKLSRSS
Trigger: GGAAGACCGAGATAATTTTCTGGCTGCCATCCTTTCCCAGAAGCAGCGAAAGGCCTTGATCCAGCGCAAGCTGCGCAGAGTCTGCCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp TCTGCCGCTTCTGCTAGGCATTTCCGTGACTTAAGGAACACCAGCTaGTCCTCTACGTCGAGCTTGGAGAGGACGGCCATCATTTCCTTG +
Preference number: 5 (lower is better)
Translates to: SAASARHFRDLRNTS*SSTSSLERTAIISL
Trigger: CAAGGAAATGATGGCCGTCCTCTCCAAGCTCGACGTAGAGGACCAGCTGGTGTTCCTTAAGTCACGGAAATGCCTAGCAGAAGCGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp CCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCATCCCTTCACATAGGTaGGGTCCCATTGGAGACACT +
Preference number: 5 (lower is better)
Translates to: PKGRAWTQGSLMARCTLGIPSHR*GPIGDT
Trigger: AGTGTCTCCAATGGGACCCAACCTATGTGAAGGGAT...GCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp TTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTAACCTGGGCTGCCCGCTGACTTaGCGGGTGAGCAGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: FYSSVPRDVGSTEGFSNLGCPLT*RVSSRS
Trigger: GCTTCTGCTGCTCACCCGCAAAGTCAGCGGGCAGCC...CAGGTTAGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp TATGAGCCCAGGAGCCTGGCTTGGGGCAGAGAAGTCCCAGCACTCCTTTCAACTGAGAGGTCACAATCCTaGATGACGCCATTTCTGAGC +
Preference number: 5 (lower is better)
Translates to: YEPRSLAWGREVPALLSTERSQS*MTPFLS
Trigger: GCTCAGAAATGGCGTCATCAAGGATTGTGACCTCTC...AGTTGAAAGGAGTGCTGGGACTTCTCTGCCCCAAGCCAGGCTCCTGGGCTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp AATGCCTACTCCCCTGCTACAGTGGTTATGAGCCCAGGAGCCTGGCTTGGGGCATTTGGCAAGATCTGTTaGGACAGCAATGGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: NAYSPATVVMSPGAWLGAFGKIC*DSNGLP
Trigger: AGGAAGCCCATTGCTGTCCAAACAGATCTTGCCAAA...TGCCCCAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAGGGGAGTAGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp CCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCTCCAGAAGCAACCCGTaGATTGCAACCAGGTGCATT +
Preference number: 5 (lower is better)
Translates to: PKGRAWTQGSLMARCTLGSRSNP*IATRCI
Trigger: AATGCACCTGGTTGCAATCAACGGGTTGCTTCTGGA...GCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp CAGACAACCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTAGGGAACACTTTCTaGGCCTCCAGAAGCAACCCG +
Preference number: 5 (lower is better)
Translates to: QTTKRESLDSGVAYGKVYLGNTF*ASRSNP
Trigger: CGGGTTGCTTCTGGAGGCCAAGAAAGTGTTCCCTAA...GTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGGTTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp ACAGCCTTGGCTCTGCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCCCTGCACCACCACTTaGCCTTCTTCGATGATGGGG +
Preference number: 5 (lower is better)
Translates to: TALALLAVLQQCAKRCGIPCTTT*PSSMMG
Trigger: CCCCATCATCGAAGAAGGCAAAGTGGTGGTGCAGGG...GATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp CAGCAGCGACATGCAGGACAGTGCAGCCAGCATCGTCTCTGTGGTTaGTGTGTTCTTTCCACTCAGGCTTTTGATCCATTACCCACCGGA +
Preference number: 5 (lower is better)
Translates to: QQRHAGQCSQHRLCG*CVLSTQAFDPLPTG
Trigger: TCCGGTGGGTAATGGATCAAAAGCCTGAGTGGAAAGAACACATCAACCACAGAGACGATGCTGGCTGCACTGTCCTGCATGTCGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp GTACATCTCTGGGTTCACCATAAGGGACCGCGCCTGAGAGGGACTTaGTCTCTCCAAGGGAACGTCAACCAATGGCCACTTTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: VHLWVHHKGPRLRGT*SLQGNVNQWPLFLS
Trigger: AGAGAGGAAAAGTGGCCATTGGTTGACGTTCCCTTGGAGAGATCAAGTCCCTCTCAGGCGCGGTCCCTTATGGTGAACCCAGAGATGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp GGGCATGGAGAGGGTTGGGCCCTATGGTTTCAATGTTTGCACCGATaGAGACGAGCCACTGAACCAACTTGGGCACTTGTTCCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: GHGEGWALWFQCLHR*RRATEPTWALVPVS
Trigger: AGAAACTGGAACAAGTGCCCAAGTTGGTTCAGTGGCTCGTCTCCATCGGTGCAAACATTGAAACCATAGGGCCCAACCCTCTCCATGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp GAGTGTCACCTTCCACGAGAGAAACACTGCGGGGGTCTGCACCCTTaGTCAAGAGAAGAAAAGCTAAGTCAAAGTCCTCGTGTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: ECHLPREKHCGGLHP*SREEKLSQSPRVSG
Trigger: GCCTGAGACACGAGGACTTTGACTTAGCTTTTCTTCTCTTGACCAAGGGTGCAGACCCCCGCAGTGTTTCTCTCGTGGAAGGTGACACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp CACTGCACCGAGCAGAGAAGTCGATGGCAAGCTCCCACAGCATCCTaGCACCTTTGTCCAGCTTTGCTTCAAAGAGCTGGATATTCCCTT +
Preference number: 5 (lower is better)
Translates to: HCTEQRSRWQAPTAS*HLCPALLQRAGYSL
Trigger: AAGGGAATATCCAGCTCTTTGAAGCAAAGCTGGACAAAGGTGCCAGGATGCTGTGGGAGCTTGCCATCGACTTCTCTGCTCGGTGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp AATGCCTACTCCCCTGCTACAGTGGTTATGAGCCCAGGAGCCTGGCTTGGGGCAAGACATGAATGTTGCTaGGCAGCCTGTCTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: NAYSPATVVMSPGAWLGARHECC*AACLSL
Trigger: CAAAGAAAGACAGGCTGCCAAGCAACATTCATGTCT...TGCCCCAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAGGGGAGTAGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp AAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACAGGGCGCTTTGCACCTCTaGATGAGAACATTCATGAAG +
Preference number: 5 (lower is better)
Translates to: KGEPGLRGRLWQGVLWAQGALHL*MRTFMK
Trigger: CTTCATGAATGTTCTCATCAAGAGGTGCAAAGCGCC...CTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp CCAAGGCAAAGGCAAGACCACTTTGGAGTGTGCAGGAAATACCTTCAAATGTTCCTTCTGGTAGGCTGCTaGCTGCCTCCGGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PRQRQDHFGVCRKYLQMFLLVGC*LPPVAF
Trigger: GAAGGCCACCGGAGGCAGCAAGCAGCCTACCAGAAG...GAACATTTGAAGGTATTTCCTGCACACTCCAAAGTGGTCTTGCCTTTGCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp CCAGGTGCATTTTTGACTGAACCATGCACTTGGCCTCACAGCGCCTaGGGGGCCTGTGGAAATCTTCACACTGCTCATCCTCACATTTCA +
Preference number: 5 (lower is better)
Translates to: PGAFLTEPCTWPHSA*GACGNLHTAHPHIS
Trigger: TGAAATGTGAGGATGAGCAGTGTGAAGATTTCCACAGGCCCCTCAGGCGCTGTGAGGCCAAGTGCATGGTTCAGTCAAAAATGCACCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp TCCCACAGCATCCTGGCACCTTTGTCCAGCTTTGCTTCAAAGAGCTaGATATTCCCTTTTGAGTGTTTCAGCCTCTTCTGCAGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: SHSILAPLSSFASKS*IFPFECFSLFCRPW
Trigger: CCAGGGCCTGCAGAAGAGGCTGAAACACTCAAAAGGGAATATCCAGCTCTTTGAAGCAAAGCTGGACAAAGGTGCCAGGATGCTGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp AAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTCAGACAACCAAAACATCCCTCTGCTCCTaGGCTGTCCCCTGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: KSPETTGKYTTVATQTTKTSLCS*AVPCWL
Trigger: GAGCCAGCAGGGGACAGCCAAGGAGCAGAGGGATGT...TTTGGTTGTCTGAGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp AAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACAGATCACTGTCCCCTGTTaGTGTTTCTGTAGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: KGEPGLRGRLWQGVLWAQITVPC*CFCSFL
Trigger: GAGAAAGCTACAGAAACACAAACAGGGGACAGTGAT...CTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp AAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACAGAAGAATCCAAGAGAGTaGGCTTGGGACCATCAAAGA +
Preference number: 5 (lower is better)
Translates to: KGEPGLRGRLWQGVLWAQKNPRE*AWDHQR
Trigger: TCTTTGATGGTCCCAAGCCAACTCTCTTGGATTCTT...CTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp AAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACAGATTCCAGCTGAGTGGTaGAGCATGTCAAACTTGATG +
Preference number: 5 (lower is better)
Translates to: KGEPGLRGRLWQGVLWAQIPAEW*SMSNLM
Trigger: CATCAAGTTTGACATGCTCAACCACTCAGCTGGAAT...CTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp CTACTGTGCTTCTGCTGGCATAGTGGAACAGAGAGAGCAGGTCACTaGAACGGAAAGCCACGCCTTTCATTATGCTTTGGGCAGTGTCTC +
Preference number: 5 (lower is better)
Translates to: LLCFCWHSGTERAGH*NGKPRLSLCFGQCL
Trigger: GAGACACTGCCCAAAGCATAATGAAAGGCGTGGCTTTCCGTTTCAGTGACCTGCTCTCTCTGTTCCACTATGCCAGCAGAAGCACAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp ATCTCATGCAGATTCCTGGGTAGGCCTTCCCGAGCAGGATCTGTGTaGTCTGACACAGTCTGCCCAAAAGGTGCTTATTCAGGGCTAGTT +
Preference number: 5 (lower is better)
Translates to: ISCRFLGRPSRAGSV*SDTVCPKGAYSGLV
Trigger: AACTAGCCCTGAATAAGCACCTTTTGGGCAGACTGTGTCAGATCACACAGATCCTGCTCGGGAAGGCCTACCCAGGAATCTGCATGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp ACAGAGGGAAGTTTTCATCCCTCAGGTCCTGGAGTTTGTGGACATTaGGATCCAGTGGTTTATAGTGACTGGTGGCCTTGGTGGACTTGG +
Preference number: 5 (lower is better)
Translates to: TEGSFHPSGPGVCGH*DPVVYSDWWPWWTW
Trigger: CCAAGTCCACCAAGGCCACCAGTCACTATAAACCACTGGATCCCAATGTCCACAAACTCCAGGACCTGAGGGATGAAAACTTCCCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp GAGAGCAGGTCACTGAAACGGAAAGCCACGCCTTTCATTATGCTTTaGGCAGTGTCTCCAGTAAGGAACATGGCGTTGGGGTCATTGATG +
Preference number: 5 (lower is better)
Translates to: ESRSLKRKATPFIML*AVSPVRNMALGSLM
Trigger: CATCAATGACCCCAACGCCATGTTCCTTACTGGAGACACTGCCCAAAGCATAATGAAAGGCGTGGCTTTCCGTTTCAGTGACCTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp GCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTATAGGTTGGGTCCCATaGGAGACACTCCTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: ACCFTAVCQEMWDPQRDFIGWVP*ETLLGS
Trigger: GCTGCCAAGGAGTGTCTCCAATGGGACCCAACCTAT...AAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp AATGCCTACTCCCCTGCTACAGTGGTTATGAGCCCAGGAGCCTGGCTTGGGGCAGTTGCTGTCATATCATaGAGAATGTTTAAGGCCATG +
Preference number: 5 (lower is better)
Translates to: NAYSPATVVMSPGAWLGAVAVIS*RMFKAM
Trigger: CATGGCCTTAAACATTCTCAATGATATGACAGCAAC...TGCCCCAAGCCAGGCTCCTGGGCTCATAACCACTGTAGCAGGGGAGTAGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp CTTGGCAGCAAGAAAAGCCTCGTTCCATTTCCCGAGGTTGTAAAATaGATTGGATTTGTTGCACAGCAGCATAGCCAGTTCCCGAGGAGG +
Preference number: 5 (lower is better)
Translates to: LGSKKSLVPFPEVVK*IGFVAQQHSQFPRR
Trigger: CCTCCTCGGGAACTGGCTATGCTGCTGTGCAACAAATCCAATGCATTTTACAACCTCGGGAAATGGAACGAGGCTTTTCTTGCTGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078626.8
ENSMUST00000197049.2
CDS GCA 90 bp TACGTCGAGCTTGGAGAGGACGGCCATCATTTCCTTGCTCTTATTTaGACTCAGGTACTTTGCAGCAGCTTCCAGGTAAAACTGACTGGC +
Preference number: 5 (lower is better)
Translates to: YVELGEDGHHFLALI*TQVLCSSFQVKLTG
Trigger: GCCAGTCAGTTTTACCTGGAAGCTGCTGCAAAGTACCTGAGTGCAAATAAGAGCAAGGAAATGATGGCCGTCCTCTCCAAGCTCGACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp ACCAGCAGATCTATGAGCTTCTTCGTGCGCTTCAGCATGCCCTTCTaGAAAAGGAGATGCATCAATGTGTTCCCATTGCTGTCTTGGACG +
Preference number: 5 (lower is better)
Translates to: TSRSMSFFVRFSMPF*KRRCINVFPLLSWT
Trigger: CGTCCAAGACAGCAATGGGAACACATTGATGCATCTCCTTTTCCAGAAGGGCATGCTGAAGCGCACGAAGAAGCTCATAGATCTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp ACTCTCTGTGAGCCCCTTAGAAAGGGTTGTGTCAGCAGTACCACATaGCAAAGACTTGAAGGACGTCTGGGACTTGAGCTGAGATGTATG +
Preference number: 5 (lower is better)
Translates to: TLCEPLRKGCVSSTT*QRLEGRLGLELRCM
Trigger: CATACATCTCAGCTCAAGTCCCAGACGTCCTTCAAGTCTTTGCCATGTGGTACTGCTGACACAACCCTTTCTAAGGGGCTCACAGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp AGCTGGATATTCCCTTTTGAGTGTTTCAGCCTCTTCTGCAGGCCCTaGGTCCACTCACCATTTCCCAACTGCTGGATGGCAAGGATTATT +
Preference number: 5 (lower is better)
Translates to: SWIFPFECFSLFCRP*VHSPFPNCWMARII
Trigger: AATAATCCTTGCCATCCAGCAGTTGGGAAATGGTGAGTGGACCCAGGGCCTGCAGAAGAGGCTGAAACACTCAAAAGGGAATATCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp GTTTTCATCCCTCAGGTCCTGGAGTTTGTGGACATTGGGATCCAGTaGTTTATAGTGACTGGTGGCCTTGGTGGACTTGGAGAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: VFIPQVLEFVDIGIQ*FIVTGGLGGLGELN
Trigger: ATTGAGCTCTCCAAGTCCACCAAGGCCACCAGTCACTATAAACCACTGGATCCCAATGTCCACAAACTCCAGGACCTGAGGGATGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp AAAGCAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAACGGCCATCATTTCCTaGCTCTTATTTGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: KAAATWKKSWFCGRQSPRTAIIS*LLFALR
Trigger: CCTGAGTGCAAATAAGAGCAAGGAAATGATGGCCGT...TCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp AAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACTTTGGGCACAGATTTCCTTCTCAGCATaGTTGGTCACGTTTTTAAGG +
Preference number: 5 (lower is better)
Translates to: KGEPGLRGRLWQGVLWAQISFSA*LVTFLR
Trigger: CCTTAAAAACGTGACCAACAATGCTGAGAAGGAAAT...CTGTGCCCAAAGTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp GAGTGGTTGAGCATGTCAAACTTGATGAAGGCATCTCTAAGCTTCTaGAAGTCTCTCAGGATAATCCCTAGCAGGAACTGGGCCTCTGCG +
Preference number: 5 (lower is better)
Translates to: EWLSMSNLMKASLSF*KSLRIIPSRNWASA
Trigger: CGCAGAGGCCCAGTTCCTGCTAGGGATTATCCTGAGAGACTTTCAGAAGCTTAGAGATGCCTTCATCAAGTTTGACATGCTCAACCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp CTTTCAAGGCACACCGGAAGGAGCGAAAGGACTTGTAATTTGGCTTaGGGATGTCTTTACAGGCCATGGGGTTTTCTGACAGCACTCTCT +
Preference number: 5 (lower is better)
Translates to: LSRHTGRSERTCNLA*GCLYRPWGFLTALS
Trigger: AGAGAGTGCTGTCAGAAAACCCCATGGCCTGTAAAGACATCCTCAAGCCAAATTACAAGTCCTTTCGCTCCTTCCGGTGTGCCTTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp CATGGCGTTGGGGTCATTGATGCATTTCATCAGCAGTGCCAGCTCTaGTTGGGTGAAGTCCTGAATCTCATCACCATAAAGCTCATGGAT +
Preference number: 5 (lower is better)
Translates to: HGVGVIDAFHQQCQL*LGEVLNLITIKLMD
Trigger: ATCCATGAGCTTTATGGTGATGAGATTCAGGACTTCACCCAAGCAGAGCTGGCACTGCTGATGAAATGCATCAATGACCCCAACGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp TACAGGCCATGGGGTTTTCTGACAGCACTCTCTGGTGGAAATGCCTaGGGAAGAGGAGGTTTAGGAACGATTTGCAAAGGCCATATGTAT +
Preference number: 5 (lower is better)
Translates to: YRPWGFLTALSGGNA*GRGGLGTICKGHMY
Trigger: ATACATATGGCCTTTGCAAATCGTTCCTAAACCTCCTCTTCCCCAGGCATTTCCACCAGAGAGTGCTGTCAGAAAACCCCATGGCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp ACAGCCTTGGCTCTGCTTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCAATGCATTGGATTTGTaGCACAGCAGCATAGCCAGT +
Preference number: 5 (lower is better)
Translates to: TALALLAVLQQCAKRCGINALDL*HSSIAS
Trigger: ACTGGCTATGCTGCTGTGCAACAAATCCAATGCATT...GATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAAGCAGAGCCAAGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp CAGACAACCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACAACCAACTTGGGCACTaGTTCCAGTTTCTCATAAAA +
Preference number: 5 (lower is better)
Translates to: QTTKRESLDSGVAYGKVYNQLGH*FQFLIK
Trigger: TTTTATGAGAAACTGGAACAAGTGCCCAAGTTGGTT...GTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGGTTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp TTCTCTTCTGCACCAGCCAGCATTCAGAAGTTTAACAGAGGATGGAATGGTCTGAAAGCTGACTTTCCCTaGCTTGGATGCAGAGCCGCA +
Preference number: 5 (lower is better)
Translates to: FSSAPASIQKFNRGWNGLKADFP*LGCRAA
Trigger: TGCGGCTCTGCATCCAAGCAAGGGAAAGTCAGCTTT...CAGACCATTCCATCCTCTGTTAAACTTCTGAATGCTGGCTGGTGCAGAAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp AAAGCAGCAGCAACATGGAAGAAAAGCTGGTTCTGTGGGAGGCAAAGCCCCAGAATCGCTCTGAAGTTCTaGTTCCTCTTCAGAACATCC +
Preference number: 5 (lower is better)
Translates to: KAAATWKKSWFCGRQSPRIALKF*FLFRTS
Trigger: GGATGTTCTGAAGAGGAACAAGAACTTCAGAGCGAT...TCTGGGGCTTTGCCTCCCACAGAACCAGCTTTTCTTCCATGTTGCTGCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp AAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTCAGACAACCAAACGGGGGTCTGCACCCTaGGTCAAGAGAAGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: KSPETTGKYTTVATQTTKRGSAP*VKRRKA
Trigger: AGCTTTTCTTCTCTTGACCAAGGGTGCAGACCCCCG...TTTGGTTGTCTGAGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp CAGACAACCAAAAGGGAGAGCCTGGACTCAGGGGTCGCTTATGGCAAGGTGTACCTCCTAATGAAATATTaGAAAGCAGGAGCTCGTTTC +
Preference number: 5 (lower is better)
Translates to: QTTKRESLDSGVAYGKVYLLMKY*KAGARF
Trigger: GAAACGAGCTCCTGCTTTCAAATATTTCATTAGGAG...GTACACCTTGCCATAAGCGACCCCTGAGTCCAGGCTCTCCCTTTTGGTTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp ATGGCAGTGATCCACAGAACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAAGGGCCCTGACCAGATaGAGAAGGACTTCCAAGCCC +
Preference number: 5 (lower is better)
Translates to: MAVIHRTIIRSSSVHCTPRALTR*RRTSKP
Trigger: GGGCTTGGAAGTCCTTCTCAATCTGGTCAGGGCCCT...TGGTGTACAATGGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp AGGGCAAGAAACTCTGCAAAACAATGGAGTCACTGCTCATCGTTGTaGAGATCCCAACAAGAAAATCAGGAACCTGCAGTTGGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: RARNSAKQWSHCSSL*RSQQENQEPAVGLG
Trigger: GCCCAGACCAACTGCAGGTTCCTGATTTTCTTGTTGGGATCTTCACAACGATGAGCAGTGACTCCATTGTTTTGCAGAGTTTCTTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp GGTTGTACAGGACGTCCTCTTCATCAAAATACCCTTTCTGGGACCTaGTCTGTTGATACAGGCAGAAGAGGCTGTAGATCTCACTCCGAT +
Preference number: 5 (lower is better)
Translates to: GCTGRPLHQNTLSGT*SVDTGRRGCRSHSD
Trigger: ATCGGAGTGAGATCTACAGCCTCTTCTGCCTGTATCAACAGATCAGGTCCCAGAAAGGGTATTTTGATGAAGAGGACGTCCTGTACAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp CTCACACAGGCTGGCTGCTTCATAGAGAGCTTCTACCATTCCAGCTaGGTGGTTGAGCATGTCAAACTTGATGAAGGCATCTCTAAGCTT +
Preference number: 5 (lower is better)
Translates to: LTQAGCFIESFYHSS*VVEHVKLDEGISKL
Trigger: AAGCTTAGAGATGCCTTCATCAAGTTTGACATGCTCAACCACTCAGCTGGAATGGTAGAAGCTCTCTATGAAGCAGCCAGCCTGTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp ATGAGCTTCTTCGTGCGCTTCAGCATGCCCTTCTGGAAAAGGAGATaGATCAATGTGTTCCCATTGCTGTCTTGGACGTTAGGATTAAGG +
Preference number: 5 (lower is better)
Translates to: MSFFVRFSMPFWKRR*INVFPLLSWTLGLR
Trigger: CCTTAATCCTAACGTCCAAGACAGCAATGGGAACACATTGATGCATCTCCTTTTCCAGAAGGGCATGCTGAAGCGCACGAAGAAGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp AGTAAGGAACATGGCGTTGGGGTCATTGATGCATTTCATCAGCAGTaGCAGCTCTGCTTGGGTGAAGTCCTGAATCTCATCACCATAAAG +
Preference number: 5 (lower is better)
Translates to: SKEHGVGVIDAFHQQ*QLCLGEVLNLITIK
Trigger: CTTTATGGTGATGAGATTCAGGACTTCACCCAAGCAGAGCTGGCACTGCTGATGAAATGCATCAATGACCCCAACGCCATGTTCCTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp CTCTGCGATGCCAGCCAGCTGGCTGGTTTGATAGCAGAGATCGAGTaGTTCTCTCAGAATAACCTTTGTGTGTTCTATGTCAGAATCTCT +
Preference number: 5 (lower is better)
Translates to: LCDASQLAGLIAEIE*FSQNNLCVFYVRIS
Trigger: AGAGATTCTGACATAGAACACACAAAGGTTATTCTGAGAGAAGCACTCGATCTCTGCTATCAAACCAGCCAGCTGGCTGGCATCGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp TTCCTGAGTGAGATCTGTAATTCTGGTACAGCTGATGGATCCTCTTaGGCTTTCGAACAGCACATTGCTTGTCTACTGTGCTTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: FLSEICNSGTADGSS*AFEQHIACLLCFCW
Trigger: CCAGCAGAAGCACAGTAGACAAGCAATGTGCTGTTCGAAAGCCCAAGAGGATCCATCAGCTGTACCAGAATTACAGATCTCACTCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp CTCATCCTCACATTTCAAACCCACAATAAATCTCATGCAGATTCCTaGGTAGGCCTTCCCGAGCAGGATCTGTGTGATCTGACACAGTCT +
Preference number: 5 (lower is better)
Translates to: LILTFQTHNKSHADS*VGLPEQDLCDLTQS
Trigger: AGACTGTGTCAGATCACACAGATCCTGCTCGGGAAGGCCTACCCAGGAATCTGCATGAGATTTATTGTGGGTTTGAAATGTGAGGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp CATAGGTGTGAAATGTGCCAGGGAAAACCAGGAAACACAGATGTGCAAGGCATACTATGGTTTCAATGTTaGCACCGATGGAGACGAGCC +
Preference number: 5 (lower is better)
Translates to: HRCEMCQGKPGNTDVQGILWFQC*HRWRRA
Trigger: GGCTCGTCTCCATCGGTGCAAACATTGAAACCATAG...TATGCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp CATAGGTGTGAAATGTGCCAGGGAAAACCAGGAAACACAGATGTGCAAGGCATAAGCATCCTGGCACCTTaGTCCAGCTTTGCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: HRCEMCQGKPGNTDVQGISILAP*SSFASK
Trigger: CTTTGAAGCAAAGCTGGACAAAGGTGCCAGGATGCT...TATGCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp AAGAAGGCAGAAAAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTCTCAGGTCCTGGAGTTaGTGGACATTGGGATCCAGT +
Preference number: 5 (lower is better)
Translates to: KKAEKSPETTGKYTTVATLRSWS*WTLGSS
Trigger: ACTGGATCCCAATGTCCACAAACTCCAGGACCTGAG...AGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTTTTCTGCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp TTCTCTTCTGCACCAGCCAGCATTCAGAAGTTTAACAGAGGATGGAATGGTCTGGATGGCAGTGTAGAGTaGCTTCAGCTCTCCATTGAG +
Preference number: 5 (lower is better)
Translates to: FSSAPASIQKFNRGWNGLDGSVE*LQLSIE
Trigger: CTCAATGGAGAGCTGAAGCAACTCTACACTGCCATC...CAGACCATTCCATCCTCTGTTAAACTTCTGAATGCTGGCTGGTGCAGAAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp AATCTGACAGCTTGCAGTGATCTAAGACAATGTCCCAGATGCGGATaGTTTCTGTATAGACCCGCCCTGATTTTTCCAGGGAGTAGGTGT +
Preference number: 5 (lower is better)
Translates to: NLTACSDLRQCPRCG*FLYRPALIFPGSRC
Trigger: ACACCTACTCCCTGGAAAAATCAGGGCGGGTCTATACAGAAATCATCCGCATCTGGGACATTGTCTTAGATCACTGCAAGCTGTCAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp TCATTGGCAACAAGAATCACCTGGTGGGCACCAAATTCGATGGGCTaGGTTTTTCTTTTGTTCCCTCGCAGCAAGATTGCCAAGTCACTT +
Preference number: 5 (lower is better)
Translates to: SLATRITWWAPNSMG*VFLLFPRSKIAKSL
Trigger: AAGTGACTTGGCAATCTTGCTGCGAGGGAACAAAAGAAAAACTCAGCCCATCGAATTTGGTGCCCACCAGGTGATTCTTGTTGCCAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp TCACTGCTCATCGTTGTGAAGATCCCAACAAGAAAATCAGGAACCTaGAGTTGGTCTGGGCTTCTCTGCAAAAGTCGTAGACCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: SLLIVVKIPTRKSGT*SWSGLLCKSRRPSK
Trigger: TTTTGAGGGTCTACGACTTTTGCAGAGAAGCCCAGACCAACTGCAGGTTCCTGATTTTCTTGTTGGGATCTTCACAACGATGAGCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp CAGCAAGATTGCCAAGTCACTTACACTACAAGAATCCAAGAGAGTTaGCTTGGGACCATCAAAGAGTCCAGAATCTCTTGGAAGGCGATC +
Preference number: 5 (lower is better)
Translates to: QQDCQVTYTTRIQES*LGTIKESRISWKAI
Trigger: GATCGCCTTCCAAGAGATTCTGGACTCTTTGATGGTCCCAAGCCAACTCTCTTGGATTCTTGTAGTGTAAGTGACTTGGCAATCTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp CATAGGTGTGAAATGTGCCAGGGAAAACCAGGAAACACAGATGTGCAAGGCATATGCTTCAGCTCTCCATaGAGGAGCTTGTACATCTCT +
Preference number: 5 (lower is better)
Translates to: HRCEMCQGKPGNTDVQGICFSSP*RSLYIS
Trigger: AGAGATGTACAAGCTCCTCAATGGAGAGCTGAAGCA...TATGCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp CATAGGTGTGAAATGTGCCAGGGAAAACCAGGAAACACAGATGTGCAAGGCATAGTCACATCCTTTGGCTaGTACTCTTGGATGATGGAG +
Preference number: 5 (lower is better)
Translates to: HRCEMCQGKPGNTDVQGIVTSFG*YSWMME
Trigger: CTCCATCATCCAAGAGTACAAGCCAAAGGATGTGAC...TATGCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp GCCAGAAAATTATCTCGGTCTTCCTGGGCCAACTCATCTAATTCATaGGTCTCATCTTCACCAAAATCCCACTCTGAGTCAGCAAACTGG +
Preference number: 5 (lower is better)
Translates to: ARKLSRSSWANSSNS*VSSSPKSHSESANW
Trigger: CCAGTTTGCTGACTCAGAGTGGGATTTTGGTGAAGATGAGACTCATGAATTAGATGAGTTGGCCCAGGAAGACCGAGATAATTTTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp ATACTGCTCATCGTTGTGAAGATCCCAACAAGAAAATCAGGAACCTaGAGTTGGTCTGGGCTTCTCTGCAAAAGTCGTAGACCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: ILLIVVKIPTRKSGT*SWSGLLCKSRRPSK
Trigger: TTTTGAGGGTCTACGACTTTTGCAGAGAAGCCCAGACCAACTGCAGGTTCCTGATTTTCTTGTTGGGATCTTCACAACGATGAGCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197049.2
CDS CCA 90 bp GTCATATCATTGAGAATGTTTAAGGCCATGTTGGTACTGAAGCTGTaGAACTTCATGATGCTGTACTCTGTCTCCACAGCACTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: VISLRMFKAMLVLKL*NFMMLYSVSTALAG
Trigger: TCCAGCCAGTGCTGTGGAGACAGAGTACAGCATCATGAAGTTCCACAGCTTCAGTACCAACATGGCCTTAAACATTCTCAATGATATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp AGATTGCCAAGTCACTTACACTACAAGAATCCAAGAGAGTTGGCTTaGGACCATCAAAGAGTCCAGAATCTCTTGGAAGGCGATCAAAGG +
Preference number: 5 (lower is better)
Translates to: RLPSHLHYKNPRELA*DHQRVQNLLEGDQR
Trigger: CCTTTGATCGCCTTCCAAGAGATTCTGGACTCTTTGATGGTCCCAAGCCAACTCTCTTGGATTCTTGTAGTGTAAGTGACTTGGCAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp CCAAGGCAAAGGCAAGACCACTTTGGAGTGTGCAGGAAATACCTTCAAATGTTCGTTCCCATTGCTGTCTaGGACGTTAGGATTAAGGTA +
Preference number: 5 (lower is better)
Translates to: PRQRQDHFGVCRKYLQMFVPIAV*DVRIKV
Trigger: TACCTTAATCCTAACGTCCAAGACAGCAATGGGAAC...GAACATTTGAAGGTATTTCCTGCACACTCCAAAGTGGTCTTGCCTTTGCCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp ACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCTGAAGAGCCCAGTGAGCACCTTTGTCCAGCTTaGCTTCAAAGAGCTGGATAT +
Preference number: 5 (lower is better)
Translates to: TIIRSSSVHCTPAEEPSEHLCPA*LQRAGY
Trigger: ATATCCAGCTCTTTGAAGCAAAGCTGGACAAAGGTG...CTCACTGGGCTCTTCAGCTGGTGTACAATGGACAGAGGAACTTCTAATGATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp ACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCTGAAGAGCCCAGTGAGCTTCCAACCTTCTCTTaGGCAAGATCTGTTTGGACA +
Preference number: 5 (lower is better)
Translates to: TIIRSSSVHCTPAEEPSELPTFS*ARSVWT
Trigger: TGTCCAAACAGATCTTGCCAAAGAGAAGGTTGGAAG...CTCACTGGGCTCTTCAGCTGGTGTACAATGGACAGAGGAACTTCTAATGATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp AAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTCAGACAACCAAAACAGGCTTCACTCTCTaGCTCCTCATCTATACCATC +
Preference number: 5 (lower is better)
Translates to: KSPETTGKYTTVATQTTKTGFTL*LLIYTI
Trigger: GATGGTATAGATGAGGAGCAAGAGAGTGAAGCCTGT...TTTGGTTGTCTGAGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp TTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTAACCTGTTGGGCCATATCTCATaGGTGAACACCTCAAATGTC +
Preference number: 5 (lower is better)
Translates to: FYSSVPRDVGSTEGFSNLLGHIS*VNTSNV
Trigger: GACATTTGAGGTGTTCACCAATGAGATATGGCCCAA...CAGGTTAGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp TTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTAGAGTCCAGAATCTCTaGGAAGGCGATCAAAGGATT +
Preference number: 5 (lower is better)
Translates to: LLFYSSVPRDVGSTEGFSRVQNL*EGDQRI
Trigger: AATCCTTTGATCGCCTTCCAAGAGATTCTGGACTCT...AGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp ACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCTGAAGAGCCCAGTGAGTCCTTAGCCTTTTCATaGGCAACAAGAATCACCTGG +
Preference number: 5 (lower is better)
Translates to: TIIRSSSVHCTPAEEPSESLAFS*ATRITW
Trigger: CCAGGTGATTCTTGTTGCCAATGAAAAGGCTAAGGA...CTCACTGGGCTCTTCAGCTGGTGTACAATGGACAGAGGAACTTCTAATGATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp ATGGCAGTGATCCACAGAACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCATCTGAAAGCATCTaGGAAGCACTGGCTTCGCTT +
Preference number: 5 (lower is better)
Translates to: MAVIHRTIIRSSSVHCTPASESI*EALASL
Trigger: AAGCGAAGCCAGTGCTTCCAAGATGCTTTCAGATGC...TGGTGTACAATGGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp AAGTCGCCAGAGACAACAGGAAAATATACCACAGTAGCCACTCAGACAACCAAATCCTTCTCAGCATTGTaGGTCACGTTTTTAAGGGCC +
Preference number: 5 (lower is better)
Translates to: KSPETTGKYTTVATQTTKSFSAL*VTFLRA
Trigger: GGCCCTTAAAAACGTGACCAACAATGCTGAGAAGGA...TTTGGTTGTCTGAGTGGCTACTGTGGTATATTTTCCTGTTGTCTCTGGCGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp GGAATTTCTGATAGGCCCTTAGAACTGGATGCCAGCTTTTCCAGGTaGCTGTTGATTTTGTCAATCGCTCTGAAGTTCTTGTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: GISDRPLELDASFSR*LLILSIALKFLFLF
Trigger: GAAGAGGAACAAGAACTTCAGAGCGATTGACAAAATCAACAGTCACCTGGAAAAGCTGGCATCCAGTTCTAAGGGCCTATCAGAAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp GGCCCTGGGTCATTCTGGGCTATCTGGCAATATTTGGCATCCACCTaGAAAATTCCAAAGAACTCAAAGCAAGATTTGACCATTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GPGSFWAIWQYLAST*KIPKNSKQDLTISF
Trigger: GAAGGAAATGGTCAAATCTTGCTTTGAGTTCTTTGGAATTTTTCAGGTGGATGCCAAATATTGCCAGATAGCCCAGAATGACCCAGGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp AAGCAGAGCATCGTTCTTCTTAATCCGGTGTCTAACACCTTTGCCTaGTTTGTTCTTCAGGTTGAAGTTGATGTCAAACTTCACCAGCAG +
Preference number: 5 (lower is better)
Translates to: KQSIVLLNPVSNTFA*FVLQVEVDVKLHQQ
Trigger: CTGCTGGTGAAGTTTGACATCAACTTCAACCTGAAGAACAAAGCAGGCAAAGGTGTTAGACACCGGATTAAGAAGAACGATGCTCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 90 bp AAATTCGATGGGCTGAGTTTTTCTTTTGTTCCCTCGCAGCAAGATTaGCAAGTCACTTACACTACAAGAATCCAAGAGAGTTGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: KFDGLSFSFVPSQQD*QVTYTTRIQESWLG
Trigger: CCCAAGCCAACTCTCTTGGATTCTTGTAGTGTAAGTGACTTGGCAATCTTGCTGCGAGGGAACAAAAGAAAAACTCAGCCCATCGAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp CAGCTTCCAGGTAAAACTGACTGGCAGAATAGGAGAGCTTGGGAATaGGAAAGGTCTTGTTCTTCAGCATTTCTTCATACTTTTCCACTG +
Preference number: 5 (lower is better)
Translates to: QLPGKTDWQNRRAWE*ERSCSSAFLHTFPL
Trigger: CAGTGGAAAAGTATGAAGAAATGCTGAAGAACAAGACCTTTCCCATTCCCAAGCTCTCCTATTCTGCCAGTCAGTTTTACCTGGAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp ATGGCAGTGATCCACAGAACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCATCGTCTCTGTGGTaGATGTGTTCTTTCCACTCA +
Preference number: 5 (lower is better)
Translates to: MAVIHRTIIRSSSVHCTPASSLW*MCSFHS
Trigger: TGAGTGGAAAGAACACATCAACCACAGAGACGATGC...TGGTGTACAATGGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp ACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCTGAAGAGCCCAGTGAGCATGTTATCAAAGTCTaGCAGACAGGCTTGAATCTC +
Preference number: 5 (lower is better)
Translates to: TIIRSSSVHCTPAEEPSEHVIKV*QTGLNL
Trigger: GAGATTCAAGCCTGTCTGCAAGACTTTGATAACATG...CTCACTGGGCTCTTCAGCTGGTGTACAATGGACAGAGGAACTTCTAATGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp TTGCTGTTTTACAGCAGTGTGCCAAGAGATGTGGGATCCACAGAGGGATTTTCTGATACCTGTCCTTTGTaGATACCCTTCAGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: LLFYSSVPRDVGSTEGFSDTCPL*IPFSFF
Trigger: AAAGAAGCTGAAGGGTATCAACAAAGGACAGGTATC...AGAAAATCCCTCTGTGGATCCCACATCTCTTGGCACACTGCTGTAAAACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp ATGGCAGTGATCCACAGAACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGTAAGGAACATGGCGTaGGGGTCATTGATGCATTTC +
Preference number: 5 (lower is better)
Translates to: MAVIHRTIIRSSSVHCTPVRNMA*GSLMHF
Trigger: GAAATGCATCAATGACCCCAACGCCATGTTCCTTAC...TGGTGTACAATGGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp TTGCAGCAGCTTCCAGGTAAAACTGACTGGCAGAATAGGAGAGCTTaGGAATGGGAAAGGTCTTGTTCTTCAGCATTTCTTCATACTTTT +
Preference number: 5 (lower is better)
Translates to: LQQLPGKTDWQNRRA*EWERSCSSAFLHTF
Trigger: AAAAGTATGAAGAAATGCTGAAGAACAAGACCTTTCCCATTCCCAAGCTCTCCTATTCTGCCAGTCAGTTTTACCTGGAAGCTGCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp ACTATCATTAGAAGTTCCTCTGTCCATTGTACACCAGCTGAAGAGCCCAGTGAGGCTTTGTTCTTCAGGTaGAAGTTGATGTCAAACTTC +
Preference number: 5 (lower is better)
Translates to: TIIRSSSVHCTPAEEPSEALFFR*KLMSNF
Trigger: GAAGTTTGACATCAACTTCAACCTGAAGAACAAAGC...CTCACTGGGCTCTTCAGCTGGTGTACAATGGACAGAGGAACTTCTAATGATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp GACAACGGACAGCAAAGGTGGCTGTCCCTTTTTAACACTAATTCACATTATATTTGTACAAGCAACAGGTaGTTTTTCCAGTGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: DNGQQRWLSLFNTNSHYICTSNR*FFQCRS
Trigger: GGAGCGGCACTGGAAAAACAACCTGTTGCTTGTACA...AATATAATGTGAATTAGTGTTAAAAAGGGACAGCCACCTTTGCTGTCCGTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp GACAACGGACAGCAAAGGTGGCTGTCCCTTTTTAACACTAATTCACATTATATTTCCAAGAGAGTTGGCTaGGGACCATCAAAGAGTCCA +
Preference number: 5 (lower is better)
Translates to: DNGQQRWLSLFNTNSHYISKRVG*GPSKSP
Trigger: TGGACTCTTTGATGGTCCCAAGCCAACTCTCTTGGA...AATATAATGTGAATTAGTGTTAAAAAGGGACAGCCACCTTTGCTGTCCGTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp CATAGGTGTGAAATGTGCCAGGGAAAACCAGGAAACACAGATGTGCAAGGCATAAACTCAAAGCAAGATTaGACCATTTCCTTCTCAGCA +
Preference number: 5 (lower is better)
Translates to: HRCEMCQGKPGNTDVQGINSKQD*TISFSA
Trigger: TGCTGAGAAGGAAATGGTCAAATCTTGCTTTGAGTT...TATGCCTTGCACATCTGTGTTTCCTGGTTTTCCCTGGCACATTTCACACCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 90 bp TCTTCTCACTCAAGGTCAAATCCAGGTCTAAAATTATTCTTAATATaGGCCCTGGGTCATTCTGGGCTATCTGGCAATATTTGGCATCCA +
Preference number: 5 (lower is better)
Translates to: SSHSRSNPGLKLFLI*ALGHSGLSGNIWHP
Trigger: TGGATGCCAAATATTGCCAGATAGCCCAGAATGACCCAGGGCCCATATTAAGAATAATTTTAGACCTGGATTTGACCTTGAGTGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp GACAACGGACAGCAAAGGTGGCTGTCCCTTTTTAACACTAATTCACATTATATTCGATCTTCCTTAAAATaGGGGGATCGTTTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: DNGQQRWLSLFNTNSHYIRSSLK*GDRFLP
Trigger: AGGGAGGAAACGATCCCCCAATTTTAAGGAAGATCG...AATATAATGTGAATTAGTGTTAAAAAGGGACAGCCACCTTTGCTGTCCGTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS-3UTR CAA 90 bp ATGGCAGTGATCCACAGAACTATCATTAGAAGTTCCTCTGTCCATTGTACACCATTGGGGCTGAATTTCTaGGATTTCATATTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: MAVIHRTIIRSSSVHCTPLGLNF*DFIFRA
Trigger: TGCCCTGAATATGAAATCCAAGAAATTCAGCCCCAA...TGGTGTACAATGGACAGAGGAACTTCTAATGATAGTTCTGTGGATCACTGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp AAGACATACTTCTCAAAAAGACTTTGTAGTGACAACTCAGAGACATaGATGTTGCTTGGCAGCCTGTCTTTCTTTGCTGACAACAGTAGA +
Preference number: 5 (lower is better)
Translates to: KTYFSKRLCSDNSET*MLLGSLSFFADNSR
Trigger: TCTACTGTTGTCAGCAAAGAAAGACAGGCTGCCAAGCAACATTCATGTCTCTGAGTTGTCACTACAAAGTCTTTTTGAGAAGTATGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp TGCTTATTCAGGGCTAGTTTCACCTGGTCAGTCACTATTAAGAAATaGTCCTTTGTTTTCTTCTCACTCAAGGTCAAATCCAGGTCTAAA +
Preference number: 5 (lower is better)
Translates to: CLFRASFTWSVTIKK*SFVFFSLKVKSRSK
Trigger: TTTAGACCTGGATTTGACCTTGAGTGAGAAGAAAACAAAGGATCATTTCTTAATAGTGACTGACCAGGTGAAACTAGCCCTGAATAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 90 bp GTGCTTGGCATAATAGTCTCCTTGTATGATCCATTCATAAGGAGTTaGGGTCTTAACAAACATGCTATCATCAAAGTCTTTATTTTCATC +
Preference number: 5 (lower is better)
Translates to: VLGIIVSLYDPFIRS*GLNKHAIIKVFIFI
Trigger: GATGAAAATAAAGACTTTGATGATAGCATGTTTGTTAAGACCTCAACTCCTTATGAATGGATCATACAAGGAGACTATTATGCCAAGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp CCCGAGGAGGAGTCCTTGCCGCGCGCGGGTCCCACATaGCCGGGACTCGCCGCCGCCGCCTCGGGATGCGCG +
Preference number: 6 (lower is better)
Translates to: PEEESLPRAGPT*PGLAAAASGCA
Trigger: CGCGCATCCCGAGGCGGCGGCGGCGAGTCCCGGCCATGTGGGACCCGCGCGCGGCAAGGACTCCTCCTCGGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp CCCACATGGCCGGGACTCGCCGCCGCCGCCTCGGGATaGGCGCAGGTGACACCGAGGCCCCGCGTTCCGAGG +
Preference number: 6 (lower is better)
Translates to: PTWPGLAAAASG*AQVTPRPRVPR
Trigger: CCTCGGAACGCGGGGCCTCGGTGTCACCTGCGCGCATCCCGAGGCGGCGGCGGCGAGTCCCGGCCATGTGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp CGGAAAGCTGCTTCCCGCGGCTCGTGCGGGACCGGCTaGGGGAGCGCCGCGCAGGCCGAGTCCGTGCTCCCA +
Preference number: 6 (lower is better)
Translates to: RKAASRGSCGTG*GSAAQAESVLP
Trigger: TGGGAGCACGGACTCGGCCTGCGCGGCGCTCCCGCAGCCGGTCCCGCACGAGCCGCGGGAAGCAGCTTTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp GCCACAGACTTCACACTGGCTGCCACCAGCACCCGCTaGACCACCTTCAGCAGCCTCTTGGGCACCTGGCCC +
Preference number: 6 (lower is better)
Translates to: ATDFTLAATSTR*TTFSSLLGTWP
Trigger: GGGCCAGGTGCCCAAGAGGCTGCTGAAGGTGGTGCAGCGGGTGCTGGTGGCAGCCAGTGTGAAGTCTGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp GGTCCATGGGGCCCGTACAGAGCAGGCGGTTCAGTCTaGCCTCCTCATGGCAGAGGCCACGGACCACAGTGC +
Preference number: 6 (lower is better)
Translates to: GPWGPYRAGGSV*PPHGRGHGPQC
Trigger: GCACTGTGGTCCGTGGCCTCTGCCATGAGGAGGTCAGACTGAACCGCCTGCTCTGTACGGGCCCCATGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp GATCTGGAGAGCCTCCCCAGGTGGGCAGCTGGGTCTTaGCGGTTCTTCCGCCTGCTCTCTGTCAGCGCTTTG +
Preference number: 6 (lower is better)
Translates to: DLESLPRWAAGS*RFFRLLSVSAL
Trigger: CAAAGCGCTGACAGAGAGCAGGCGGAAGAACCGCCAAGACCCAGCTGCCCACCTGGGGAGGCTCTCCAGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp AGGGGCAGAAGATCTGGAGAGCCTCCCCAGGTGGGCAGCTGGGTCTaGGCGGTTCTTCCGCCTGCTCTCTGTCAGCGCTTTGTTCCAAGC +
Preference number: 6 (lower is better)
Translates to: RGRRSGEPPQVGSWV*AVLPPALCQRFVPS
Trigger: GCTTGGAACAAAGCGCTGACAGAGAGCAGGCGGAAGAACCGCCAAGACCCAGCTGCCCACCTGGGGAGGCTCTCCAGATCTTCTGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp GCAGTGAGCCTGGCAGCCTCCAGAAGGCAGCCATGTTaGTTCATCAATAGGGCAGCCTCTTCCCTCCGGCCC +
Preference number: 6 (lower is better)
Translates to: AVSLAASRRQPC*FINRAASSLRP
Trigger: GGGCCGGAGGGAAGAGGCTGCCCTATTGATGAAGCAACATGGCTGCCTTCTGGAGGCTGCCAGGCTCACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp AGATCTGGAGAGCCTCCCCAGGTGGGCAGCTGGGTCTaGGCGGTTCTTCCGCCTGCTCTCTGTCAGCGCTTT +
Preference number: 6 (lower is better)
Translates to: RSGEPPQVGSWV*AVLPPALCQRF
Trigger: AAAGCGCTGACAGAGAGCAGGCGGAAGAACCGCCAAGACCCAGCTGCCCACCTGGGGAGGCTCTCCAGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp CCTGGCCCGGCCAATCCATGCTCATCAGCTGCAGCCTaGTCTGGATCTCCCGGAAGTGGCGGAAGAGAAGCG +
Preference number: 6 (lower is better)
Translates to: PGPANPCSSAAA*SGSPGSGGREA
Trigger: CGCTTCTCTTCCGCCACTTCCGGGAGATCCAGACAAGGCTGCAGCTGATGAGCATGGATTGGCCGGGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp TCTTGGGCACCTGGCCCGGCCAATCCATGCTCATCAGCTGCAGCCTaGTCTGGATCTCCCGGAAGTGGCGGAAGAGAAGCGGCTTGCAGA +
Preference number: 6 (lower is better)
Translates to: SWAPGPANPCSSAAA*SGSPGSGGREAACR
Trigger: TCTGCAAGCCGCTTCTCTTCCGCCACTTCCGGGAGATCCAGACAAGGCTGCAGCTGATGAGCATGGATTGGCCGGGCCAGGTGCCCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp CTCAGGCACATGAGCAGCGGCCTGTCCTGGCTGTCTTaGAGACCCTCAGGCAGTGCTCCACTGTCAATCAGG +
Preference number: 6 (lower is better)
Translates to: LRHMSSGLSWLS*RPSGSAPLSIR
Trigger: CCTGATTGACAGTGGAGCACTGCCTGAGGGTCTCCAAGACAGCCAGGACAGGCCGCTGCTCATGTGCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp GTCCTCCTCCTGGCGGAGCAGCTTCTCAAAGTCCTCTaGGTAGCTGGAGGACAGAAGGAAGGCCTGCATGGC +
Preference number: 6 (lower is better)
Translates to: VLLLAEQLLKVL*VAGGQKEGLHG
Trigger: GCCATGCAGGCCTTCCTTCTGTCCTCCAGCTACCCAGAGGACTTTGAGAAGCTGCTCCGCCAGGAGGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp CCCGTACAGAGCAGGCGGTTCAGTCTGACCTCCTCATaGCAGAGGCCACGGACCACAGTGCCTTTGGTATGC +
Preference number: 6 (lower is better)
Translates to: PVQSRRFSLTSS*QRPRTTVPLVC
Trigger: GCATACCAAAGGCACTGTGGTCCGTGGCCTCTGCCATGAGGAGGTCAGACTGAACCGCCTGCTCTGTACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp CCTGCACCTTCCTCTGCAGCATGTGGCTCTGCTCCTTaGAGCCCAGGTGACTACGGATCCAGACGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: PAPSSAACGSAP*SPGDYGSRRSA
Trigger: AGCAGAGCGTCTGGATCCGTAGTCACCTGGGCTCCAAGGAGCAGAGCCACATGCTGCAGAGGAAGGTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp ACATTGAAGCGGGCAACCCCCAGGAGGCATGAGGCCTaGAAATCCTTGTTGGCAGTGAGCCTGGCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: TLKRATPRRHEA*KSLLAVSLAAS
Trigger: GGAGGCTGCCAGGCTCACTGCCAACAAGGATTTTCAGGCCTCATGCCTCCTGGGGGTTGCCCGCTTCAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp TCTGGCCACATTGAAGCGGGCAACCCCCAGGAGGCATaGGGCCTGAAAATCCTTGTTGGCAGTGAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: SGHIEAGNPQEA*GLKILVGSEPG
Trigger: GCCAGGCTCACTGCCAACAAGGATTTTCAGGCCTCATGCCTCCTGGGGGTTGCCCGCTTCAATGTGGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp CCAGGTGGGCAGCTGGGTCTTGGCGGTTCTTCCGCCTaGTCTCTGTCAGCGCTTTGTTCCAAGCCAAAAGCA +
Preference number: 6 (lower is better)
Translates to: PGGQLGLGGSSA*SLSALCSKPKA
Trigger: TGCTTTTGGCTTGGAACAAAGCGCTGACAGAGAGCAGGCGGAAGAACCGCCAAGACCCAGCTGCCCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp TCCAGCGGATGCACAGAGACACCACTAGGCAGACTCTaGGCAGCTTGCGCTGGATCAAGGCCTTTCGCTGCT +
Preference number: 6 (lower is better)
Translates to: SSGCTETPLGRL*AACAGSRPFAA
Trigger: AGCAGCGAAAGGCCTTGATCCAGCGCAAGCTGCGCAGAGTCTGCCTAGTGGTGTCTCTGTGCATCCGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp AAGTTCCCAGGTCTGACCTCCCTATCCTCTCTGCTGTaGTCTGTCTGGACCCACCTCCTCCAGCGGATGCAC +
Preference number: 6 (lower is better)
Translates to: KFPGLTSLSSLL*SVWTHLLQRMH
Trigger: GTGCATCCGCTGGAGGAGGTGGGTCCAGACAGAGCACAGCAGAGAGGATAGGGAGGTCAGACCTGGGAACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp TCTTCAGTTTGTCGCCTGCTGGTGTACCCTGGGAAGTaGGCAGCAGCGACATGCAGGACAGTGCAGCCAGCA +
Preference number: 6 (lower is better)
Translates to: SSVCRLLVYPGK*AAATCRTVQPA
Trigger: TGCTGGCTGCACTGTCCTGCATGTCGCTGCTGCCCACTTCCCAGGGTACACCAGCAGGCGACAAACTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp GAGTCCTCGGGGAGAGGCATACCCAGCTCCACCTGCTaGATCAGAACTGTGATGTCCTGTACAAGGCGGTCC +
Preference number: 6 (lower is better)
Translates to: ESSGRGIPSSTC*IRTVMSCTRRS
Trigger: GGACCGCCTTGTACAGGACATCACAGTTCTGATCCAGCAGGTGGAGCTGGGTATGCCTCTCCCCGAGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp CTCATCAGCTGCAGCCTTGTCTGGATCTCCCGGAAGTaGCGGAAGAGAAGCGGCTTGCAGAAAGGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: LISCSLVWISRK*RKRSGLQKGCR
Trigger: CCTGCAGCCTTTCTGCAAGCCGCTTCTCTTCCGCCACTTCCGGGAGATCCAGACAAGGCTGCAGCTGATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp TCTCAGGCACATGAGCAGCGGCCTGTCCTGGCTGTCTaGGAGACCCTCAGGCAGTGCTCCACTGTCAATCAG +
Preference number: 6 (lower is better)
Translates to: SQAHEQRPVLAV*ETLRQCSTVNQ
Trigger: CTGATTGACAGTGGAGCACTGCCTGAGGGTCTCCAAGACAGCCAGGACAGGCCGCTGCTCATGTGCCTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp GTGCCGCTCCGTCCAATGAGGATGATGGGCTCTAGGGGCTTAGGGTaGAGGTCAATCACGGCGTACTCAAGCTCGCCCACTCGGAATGGA +
Preference number: 6 (lower is better)
Translates to: VPLRPMRMMGSRGLG*RSITAYSSSPTRNG
Trigger: TCCATTCCGAGTGGGCGAGCTTGAGTACGCCGTGATTGACCTCAACCCTAAGCCCCTAGAGCCCATCATCCTCATTGGACGGAGCGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp TTCAGTCTGACCTCCTCATGGCAGAGGCCACGGACCACAGTGCCTTaGGTATGCACACTGTCCCACCGCCAGTGGCAATCCACCAGGTAC +
Preference number: 6 (lower is better)
Translates to: FSLTSSWQRPRTTVP*VCTLSHRQWQSTRY
Trigger: GTACCTGGTGGATTGCCACTGGCGGTGGGACAGTGTGCATACCAAAGGCACTGTGGTCCGTGGCCTCTGCCATGAGGAGGTCAGACTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp CTCCAGCGGATGCACAGAGACACCACTAGGCAGACTCTGCGCAGCTaGCGCTGGATCAAGGCCTTTCGCTGCTTCTGGGAAAGGATGGCA +
Preference number: 6 (lower is better)
Translates to: LQRMHRDTTRQTLRS*RWIKAFRCFWERMA
Trigger: TGCCATCCTTTCCCAGAAGCAGCGAAAGGCCTTGATCCAGCGCAAGCTGCGCAGAGTCTGCCTAGTGGTGTCTCTGTGCATCCGCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp TGCAGCCTTGTCTGGATCTCCCGGAAGTGGCGGAAGAGAAGCGGCTaGCAGAAAGGCTGCAGGACTTCCTCAGCATTCACCAGCATCACC +
Preference number: 6 (lower is better)
Translates to: CSLVWISRKWRKRSG*QKGCRTSSAFTSIT
Trigger: GGTGATGCTGGTGAATGCTGAGGAAGTCCTGCAGCCTTTCTGCAAGCCGCTTCTCTTCCGCCACTTCCGGGAGATCCAGACAAGGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp GGCTACTCCCAATCTGTTACCAACTGGAACAAGTTGTaGAGCCCCTGGACCTGCCTGAGCGCCATCCCCAGC +
Preference number: 6 (lower is better)
Translates to: GYSQSVTNWNKL*SPWTCLSAIPS
Trigger: GCTGGGGATGGCGCTCAGGCAGGTCCAGGGGCTTCACAACTTGTTCCAGTTGGTAACAGATTGGGAGTAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp CCAGGAGGCATGAGGCCTGAAAATCCTTGTTGGCAGTaGGCCTGGCAGCCTCCAGAAGGCAGCCATGTTGCT +
Preference number: 6 (lower is better)
Translates to: PGGMRPENPCWQ*AWQPPEGSHVA
Trigger: AGCAACATGGCTGCCTTCTGGAGGCTGCCAGGCTCACTGCCAACAAGGATTTTCAGGCCTCATGCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp CTGCACATCTTCAGTTTGTCGCCTGCTGGTGTACCCTaGGAAGTGGGCAGCAGCGACATGCAGGACAGTGCA +
Preference number: 6 (lower is better)
Translates to: LHIFSLSPAGVP*EVGSSDMQDSA
Trigger: TGCACTGTCCTGCATGTCGCTGCTGCCCACTTCCCAGGGTACACCAGCAGGCGACAAACTGAAGATGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp GTCTGGATCTCCCGGAAGTGGCGGAAGAGAAGCGGCTaGCAGAAAGGCTGCAGGACTTCCTCAGCATTCACC +
Preference number: 6 (lower is better)
Translates to: VWISRKWRKRSG*QKGCRTSSAFT
Trigger: GGTGAATGCTGAGGAAGTCCTGCAGCCTTTCTGCAAGCCGCTTCTCTTCCGCCACTTCCGGGAGATCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp AGTAGGGTCTGCTCCAAAGCTCAGCAGCATCTGCACATCTTCAGTTaGTCGCCTGCTGGTGTACCCTGGGAAGTGGGCAGCAGCGACATG +
Preference number: 6 (lower is better)
Translates to: SRVCSKAQQHLHIFS*SPAGVPWEVGSSDM
Trigger: CATGTCGCTGCTGCCCACTTCCCAGGGTACACCAGCAGGCGACAAACTGAAGATGTGCAGATGCTGCTGAGCTTTGGAGCAGACCCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp GAGAGGTCACAATCCTTGATGACGCCATTTCTGAGCTaGGGCTGCCCGCTGACTTTGCGGGTGAGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: ERSQSLMTPFLS*GCPLTLRVSSR
Trigger: TCTGCTGCTCACCCGCAAAGTCAGCGGGCAGCCTCAGCTCAGAAATGGCGTCATCAAGGATTGTGACCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp TGTCCTGTACAAGGCGGTCCCTCAAAGAACGTGTCCTaGCGGCTTCAGGTTCCTGCCTGCTCACCTGGACAT +
Preference number: 6 (lower is better)
Translates to: CPVQGGPSKNVS*RLQVPACSPGH
Trigger: ATGTCCAGGTGAGCAGGCAGGAACCTGAAGCCGTCAGGACACGTTCTTTGAGGGACCGCCTTGTACAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp CACCATAAAGCTCATGGATGGACCAGGGGAGCACCCTaGGCTTCGACAGCCTCCAGGACAGGTTGTACAGGA +
Preference number: 6 (lower is better)
Translates to: HHKAHGWTRGAP*ASTASRTGCTG
Trigger: TCCTGTACAACCTGTCCTGGAGGCTGTCGAAGCTCAGGGTGCTCCCCTGGTCCATCCATGAGCTTTATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp GGCCTTCCAGGCGAATGTGCTGCTCATAAGACTCACTaGTTCTCTCTCGGCACTCCCTCCCCTCCAGTTCAG +
Preference number: 6 (lower is better)
Translates to: GLPGECAAHKTH*FSLGTPSPPVQ
Trigger: CTGAACTGGAGGGGAGGGAGTGCCGAGAGAGAATCAGTGAGTCTTATGAGCAGCACATTCGCCTGGAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp AGCTCAGCAGCATCTGCACATCTTCAGTTTGTCGCCTaGTGGTGTACCCTGGGAAGTGGGCAGCAGCGACAT +
Preference number: 6 (lower is better)
Translates to: SSAASAHLQFVA*WCTLGSGQQRH
Trigger: ATGTCGCTGCTGCCCACTTCCCAGGGTACACCAGCAGGCGACAAACTGAAGATGTGCAGATGCTGCTGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp CCTGCATGGCACTCAGCCACAGGTCTGTGGACTCCCTaGGGCTGTGTGCACTCTCTTTCTGAAACAGGTCAT +
Preference number: 6 (lower is better)
Translates to: PAWHSATGLWTP*GCVHSLSETGH
Trigger: ATGACCTGTTTCAGAAAGAGAGTGCACACAGCCGCAGGGAGTCCACAGACCTGTGGCTGAGTGCCATGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp TCCCTTCTATGCCTCTCACTCTGCTGCCTCGACCCCTaGCTCTGTCCTCTCTGTCAGACTCGAGCACTTTCA +
Preference number: 6 (lower is better)
Translates to: SLLCLSLCCLDP*LCPLCQTRALS
Trigger: TGAAAGTGCTCGAGTCTGACAGAGAGGACAGAGGCAGGGGTCGAGGCAGCAGAGTGAGAGGCATAGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp CCAACATGCCAAACTTCCCTTCTATGCCTCTCACTCTaGTGCCTCGACCCCTGCCTCTGTCCTCTCTGTCAG +
Preference number: 6 (lower is better)
Translates to: PTCQTSLLCLSL*CLDPCLCPLCQ
Trigger: CTGACAGAGAGGACAGAGGCAGGGGTCGAGGCAGCAGAGTGAGAGGCATAGAAGGGAAGTTTGGCATGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp TCTGGATCTCCCGGAAGTGGCGGAAGAGAAGCGGCTTaGAGAAAGGCTGCAGGACTTCCTCAGCATTCACCA +
Preference number: 6 (lower is better)
Translates to: SGSPGSGGREAA*RKAAGLPQHSP
Trigger: TGGTGAATGCTGAGGAAGTCCTGCAGCCTTTCTGCAAGCCGCTTCTCTTCCGCCACTTCCGGGAGATCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp TCAGCAGCATCTGCACATCTTCAGTTTGTCGCCTGCTaGTGTACCCTGGGAAGTGGGCAGCAGCGACATGCA +
Preference number: 6 (lower is better)
Translates to: SAASAHLQFVAC*CTLGSGQQRHA
Trigger: TGCATGTCGCTGCTGCCCACTTCCCAGGGTACACCAGCAGGCGACAAACTGAAGATGTGCAGATGCTGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp AGAGACACCACTAGGCAGACTCTGCGCAGCTTGCGCTaGATCAAGGCCTTTCGCTGCTTCTGGGAAAGGATG +
Preference number: 6 (lower is better)
Translates to: RDTTRQTLRSLR*IKAFRCFWERM
Trigger: CATCCTTTCCCAGAAGCAGCGAAAGGCCTTGATCCAGCGCAAGCTGCGCAGAGTCTGCCTAGTGGTGTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp TGCTCCAAAGCTCAGCAGCATCTGCACATCTTCAGTTaGTCGCCTGCTGGTGTACCCTGGGAAGTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: CSKAQQHLHIFS*SPAGVPWEVGS
Trigger: GCTGCCCACTTCCCAGGGTACACCAGCAGGCGACAAACTGAAGATGTGCAGATGCTGCTGAGCTTTGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp CGTCCAATGAGGATGATGGGCTCTAGGGGCTTAGGGTaGAGGTCAATCACGGCGTACTCAAGCTCGCCCACT +
Preference number: 6 (lower is better)
Translates to: RPMRMMGSRGLG*RSITAYSSSPT
Trigger: AGTGGGCGAGCTTGAGTACGCCGTGATTGACCTCAACCCTAAGCCCCTAGAGCCCATCATCCTCATTGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp GCATTGTTGGTCACGTTTTTAAGGGCCCTGACCAGATaGAGAAGGACTTCCAAGCCCCCAGGAGCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: ALLVTFLRALTR*RRTSKPPGASA
Trigger: GGCGCTGGCTCCTGGGGGCTTGGAAGTCCTTCTCAATCTGGTCAGGGCCCTTAAAAACGTGACCAACAATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp CAGTGCACAAACTGCAGCTCCAGCAGCACCACTGTATaGATAATGCTGGGGACCAGCGGCGCTTTGCACCTC +
Preference number: 6 (lower is better)
Translates to: QCTNCSSSSTTV*IMLGTSGALHL
Trigger: GAGGTGCAAAGCGCCGCTGGTCCCCAGCATTATCAATACAGTGGTGCTGCTGGAGCTGCAGTTTGTGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp ATGCACAGAGACACCACTAGGCAGACTCTGCGCAGCTaGCGCTGGATCAAGGCCTTTCGCTGCTTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: MHRDTTRQTLRS*RWIKAFRCFWE
Trigger: TTCCCAGAAGCAGCGAAAGGCCTTGATCCAGCGCAAGCTGCGCAGAGTCTGCCTAGTGGTGTCTCTGTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp CACAGGTCGCACTGGGTCCTGTCTACATCGGCCCTTTaGAAGTTCCCAGGTCTGACCTCCCTATCCTCTCTG +
Preference number: 6 (lower is better)
Translates to: HRSHWVLSTSAL*KFPGLTSLSSL
Trigger: CAGAGAGGATAGGGAGGTCAGACCTGGGAACTTCAAAAGGGCCGATGTAGACAGGACCCAGTGCGACCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp CCCTGCTGGCTCCACTGTGGCTCCTCCTGCACAGGCTTCACTCTCTaGCTCCTCATCTATACCATCCACCGTTTCCACTTTGATGGAACC +
Preference number: 6 (lower is better)
Translates to: PCWLHCGSSCTGFTL*LLIYTIHRFHFDGT
Trigger: GGTTCCATCAAAGTGGAAACGGTGGATGGTATAGATGAGGAGCAAGAGAGTGAAGCCTGTGCAGGAGGAGCCACAGTGGAGCCAGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp ATGGACCAGGGGAGCACCCTGAGCTTCGACAGCCTCCAGGACAGGTaGTACAGGACGTCCTCTTCATCAAAATACCCTTTCTGGGACCTG +
Preference number: 6 (lower is better)
Translates to: MDQGSTLSFDSLQDR*YRTSSSSKYPFWDL
Trigger: CAGGTCCCAGAAAGGGTATTTTGATGAAGAGGACGTCCTGTACAACCTGTCCTGGAGGCTGTCGAAGCTCAGGGTGCTCCCCTGGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp TCCTTCTCAGCATTGTTGGTCACGTTTTTAAGGGCCCTGACCAGATaGAGAAGGACTTCCAAGCCCCCAGGAGCCAGCGCCAGGACCTTC +
Preference number: 6 (lower is better)
Translates to: SFSALLVTFLRALTR*RRTSKPPGASARTF
Trigger: GAAGGTCCTGGCGCTGGCTCCTGGGGGCTTGGAAGTCCTTCTCAATCTGGTCAGGGCCCTTAAAAACGTGACCAACAATGCTGAGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp CCGGAAGTCCCGGATAGCTCTGGTCACATCCTTTGGCTTGTACTCTaGGATGATGGAGAACACCTCCCCAGATTCCCGGTCCTTCTTGCC +
Preference number: 6 (lower is better)
Translates to: PEVPDSSGHILWLVL*DDGEHLPRFPVLLA
Trigger: GGCAAGAAGGACCGGGAATCTGGGGAGGTGTTCTCCATCATCCAAGAGTACAAGCCAAAGGATGTGACCAGAGCTATCCGGGACTTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp AGGTGGAACCGGAAGTCCCGGATAGCTCTGGTCACATCCTTTGGCTaGTACTCTTGGATGATGGAGAACACCTCCCCAGATTCCCGGTCC +
Preference number: 6 (lower is better)
Translates to: RWNRKSRIALVTSFG*YSWMMENTSPDSRS
Trigger: GGACCGGGAATCTGGGGAGGTGTTCTCCATCATCCAAGAGTACAAGCCAAAGGATGTGACCAGAGCTATCCGGGACTTCCGGTTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp GAAAAGCTAAGTCAAAGTCCTCGTGTCTCAGGCACATaGGCAGCGGCCTGTCCTGGCTGTCTTGGAGACCCT +
Preference number: 6 (lower is better)
Translates to: EKLSQSPRVSGT*AAACPGCLGDP
Trigger: AGGGTCTCCAAGACAGCCAGGACAGGCCGCTGCTCATGTGCCTGAGACACGAGGACTTTGACTTAGCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp GAGGCATACCCAGCTCCACCTGCTGGATCAGAACTGTaGTGTCCTGTACAAGGCGGTCCCTCAAAGAACGTG +
Preference number: 6 (lower is better)
Translates to: EAYPAPPAGSEL*CPVQGGPSKNV
Trigger: CACGTTCTTTGAGGGACCGCCTTGTACAGGACATCACAGTTCTGATCCAGCAGGTGGAGCTGGGTATGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp TCCTGGCACAGGACATGGTTCTTCGTCACAAAGATCTaGTGTAGATGCTCCAGCTGGTGTGGGTGGTCCGGC +
Preference number: 6 (lower is better)
Translates to: SWHRTWFFVTKI*CRCSSWCGWSG
Trigger: GCCGGACCACCCACACCAGCTGGAGCATCTACATCAGATCTTTGTGACGAAGAACCATGTCCTGTGCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp TGGGTTCACCATAAGGGACCGCGCCTGAGAGGGACTTaGTCTCTCCAAGGGAACGTCAACCAATGGCCACTT +
Preference number: 6 (lower is better)
Translates to: WVHHKGPRLRGT*SLQGNVNQWPL
Trigger: AAGTGGCCATTGGTTGACGTTCCCTTGGAGAGATCAAGTCCCTCTCAGGCGCGGTCCCTTATGGTGAACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp AGCAACCCGTTGATTGCAACCAGGTGCATTTTTGACTaGACCATGCACTTGGCCTCACAGCGCCTGAGGGGC +
Preference number: 6 (lower is better)
Translates to: SNPLIATRCIFD*TMHLASQRLRG
Trigger: GCCCCTCAGGCGCTGTGAGGCCAAGTGCATGGTTCAGTCAAAAATGCACCTGGTTGCAATCAACGGGTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp GGCATGGAGAGGGTTGGGCCCTATGGTTTCAATGTTTaGACCGATGGAGACGAGCCACTGAACCAACTTGGG +
Preference number: 6 (lower is better)
Translates to: GMERVGPYGFNV*TDGDEPLNQLG
Trigger: CCCAAGTTGGTTCAGTGGCTCGTCTCCATCGGTGCAAACATTGAAACCATAGGGCCCAACCCTCTCCATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp CAGAGGCGGGTCAGTACCACCCCACAGTGCACAAACTaGAGCTCCAGCAGCACCACTGTATTGATAATGCTG +
Preference number: 6 (lower is better)
Translates to: QRRVSTTPQCTN*SSSSTTVLIML
Trigger: CAGCATTATCAATACAGTGGTGCTGCTGGAGCTGCAGTTTGTGCACTGTGGGGTGGTACTGACCCGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp TCTCAGAGTTCTCACTGCACCGAGCAGAGAAGTCGATaGCAAGCTCCCACAGCATCCTGGCACCTTTGTCCA +
Preference number: 6 (lower is better)
Translates to: SQSSHCTEQRSR*QAPTASWHLCP
Trigger: TGGACAAAGGTGCCAGGATGCTGTGGGAGCTTGCCATCGACTTCTCTGCTCGGTGCAGTGAGAACTCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp TCTGCTAGGCATTTCCGTGACTTAAGGAACACCAGCTaGTCCTCTACGTCGAGCTTGGAGAGGACGGCCATC +
Preference number: 6 (lower is better)
Translates to: SARHFRDLRNTS*SSTSSLERTAI
Trigger: GATGGCCGTCCTCTCCAAGCTCGACGTAGAGGACCAGCTGGTGTTCCTTAAGTCACGGAAATGCCTAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp GGGCTGCGGGTAAACTTTACTCCACACAGGTCGCACTaGGTCCTGTCTACATCGGCCCTTTTGAAGTTCCCA +
Preference number: 6 (lower is better)
Translates to: GLRVNFTPHRSH*VLSTSALLKFP
Trigger: TGGGAACTTCAAAAGGGCCGATGTAGACAGGACCCAGTGCGACCTGTGTGGAGTAAAGTTTACCCGCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp GCTTGGATGCAGAGCCGCATAAGGGCATGGAGAGGGTaGGGCCCTATGGTTTCAATGTTTGCACCGATGGAG +
Preference number: 6 (lower is better)
Translates to: AWMQSRIRAWRG*GPMVSMFAPME
Trigger: CTCCATCGGTGCAAACATTGAAACCATAGGGCCCAACCCTCTCCATGCCCTTATGCGGCTCTGCATCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp ATGATGGAGAACACCTCCCCAGATTCCCGGTCCTTCTaGCCGTACAGAAACTCCCAGAAGTGCAGGAGTGCG +
Preference number: 6 (lower is better)
Translates to: MMENTSPDSRSF*PYRNSQKCRSA
Trigger: CGCACTCCTGCACTTCTGGGAGTTTCTGTACGGCAAGAAGGACCGGGAATCTGGGGAGGTGTTCTCCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp GCAGCTGGGTCTTGGCGGTTCTTCCGCCTGCTCTCTGTCAGCGCTTaGTTCCAAGCCAAAAGCAGAGCATCGTTCTTCTTAATCCGGTGT +
Preference number: 6 (lower is better)
Translates to: AAGSWRFFRLLSVSA*FQAKSRASFFLIRC
Trigger: ACACCGGATTAAGAAGAACGATGCTCTGCTTTTGGCTTGGAACAAAGCGCTGACAGAGAGCAGGCGGAAGAACCGCCAAGACCCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp GTCCCAGATGCGGATGATTTCTGTATAGACCCGCCCTaGTTTTTCCAGGGAGTAGGTGTTCCGCTCCGTACC +
Preference number: 6 (lower is better)
Translates to: VPDADDFCIDPP*FFQGVGVPLRT
Trigger: GGTACGGAGCGGAACACCTACTCCCTGGAAAAATCAGGGCGGGTCTATACAGAAATCATCCGCATCTGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp TTGTACATCTCTGGGTTCACCATAAGGGACCGCGCCTaGGAGGGACTTGATCTCTCCAAGGGAACGTCAACC +
Preference number: 6 (lower is better)
Translates to: LYISGFTIRDRA*EGLDLSKGTST
Trigger: GGTTGACGTTCCCTTGGAGAGATCAAGTCCCTCTCAGGCGCGGTCCCTTATGGTGAACCCAGAGATGTACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp CCTTTGTGTGTTCTATGTCAGAATCTCTGGCCACATTaGAGCGGGCAACCCCCAGGAGGCATGAGGCCTGAA +
Preference number: 6 (lower is better)
Translates to: PLCVLCQNLWPH*SGQPPGGMRPE
Trigger: TTCAGGCCTCATGCCTCCTGGGGGTTGCCCGCTTCAATGTGGCCAGAGATTCTGACATAGAACACACAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp CATAGAGCTGGTCCATGGAACTCTCCAGCAGCCGGATaGAGCACAGGTAGGACTTCTCCACGTTCTCATCCT +
Preference number: 6 (lower is better)
Translates to: HRAGPWNSPAAG*STGRTSPRSHP
Trigger: AGGATGAGAACGTGGAGAAGTCCTACCTGTGCTTCATCCGGCTGCTGGAGAGTTCCATGGACCAGCTCTATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp GCGTTCTTGACTGACAGGGTCAGAATTTTGACCTGCTaGGTCATCACCTCCTCTGCTTCAGCCCAGGCCTTC +
Preference number: 6 (lower is better)
Translates to: AFLTDRVRILTC*VITSSASAQAF
Trigger: GAAGGCCTGGGCTGAAGCAGAGGAGGTGATGACTCAGCAGGTCAAAATTCTGACCCTGTCAGTCAAGAACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp AGCGGAAGAAGAGCCTCTTGTAGTCTCCAGGGTTCCTaGGAACATAGAGCTGGTCCATGGAACTCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: SGRRASCSLQGS*EHRAGPWNSPA
Trigger: TGCTGGAGAGTTCCATGGACCAGCTCTATGTTCGCAGGAACCCTGGAGACTACAAGAGGCTCTTCTTCCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp CTTCTTGCCGTACAGAAACTCCCAGAAGTGCAGGAGTaGGATGTAGCTCTTGGGGAGGCACAGGACAGCATT +
Preference number: 6 (lower is better)
Translates to: LLAVQKLPEVQE*DVALGEAQDSI
Trigger: AATGCTGTCCTGTGCCTCCCCAAGAGCTACATCGCACTCCTGCACTTCTGGGAGTTTCTGTACGGCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp GGAAATCAGCACAGCCTCTGTGGCTGTTCCCTCAAATaGTTTGCCAGGACTAAAGTAGCTTTCGGGGCTGCG +
Preference number: 6 (lower is better)
Translates to: GNQHSLCGCSLK*FARTKVAFGAA
Trigger: CGCAGCCCCGAAAGCTACTTTAGTCCTGGCAAAGCATTTGAGGGAACAGCCACAGAGGCTGTGCTGATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp GAGCAGAGAAGTCGATGGCAAGCTCCCACAGCATCCTaGCACCTTTGTCCAGCTTTGCTTCAAAGAGCTGGA +
Preference number: 6 (lower is better)
Translates to: EQRSRWQAPTAS*HLCPALLQRAG
Trigger: TCCAGCTCTTTGAAGCAAAGCTGGACAAAGGTGCCAGGATGCTGTGGGAGCTTGCCATCGACTTCTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp TTGCTTCAGCTCTCCATTGAGGAGCTTGTACATCTCTaGGTTCACCATAAGGGACCGCGCCTGAGAGGGACT +
Preference number: 6 (lower is better)
Translates to: LLQLSIEELVHL*VHHKGPRLRGT
Trigger: AGTCCCTCTCAGGCGCGGTCCCTTATGGTGAACCCAGAGATGTACAAGCTCCTCAATGGAGAGCTGAAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp CGGATAGCTCTGGTCACATCCTTTGGCTTGTACTCTTaGATGATGGAGAACACCTCCCCAGATTCCCGGTCC +
Preference number: 6 (lower is better)
Translates to: RIALVTSFGLYS*MMENTSPDSRS
Trigger: GGACCGGGAATCTGGGGAGGTGTTCTCCATCATCCAAGAGTACAAGCCAAAGGATGTGACCAGAGCTATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp GAACCGGAAGTCCCGGATAGCTCTGGTCACATCCTTTaGCTTGTACTCTTGGATGATGGAGAACACCTCCCC +
Preference number: 6 (lower is better)
Translates to: EPEVPDSSGHIL*LVLLDDGEHLP
Trigger: GGGGAGGTGTTCTCCATCATCCAAGAGTACAAGCCAAAGGATGTGACCAGAGCTATCCGGGACTTCCGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp TCATCTTCACCAAAATCCCACTCTGAGTCAGCAAACTaGTCCATGGGGCCCGTACAGAGCAGGCGGTTCAGT +
Preference number: 6 (lower is better)
Translates to: SSSPKSHSESAN*SMGPVQSRRFS
Trigger: ACTGAACCGCCTGCTCTGTACGGGCCCCATGGACCAGTTTGCTGACTCAGAGTGGGATTTTGGTGAAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp GGGAGCACCCTGAGCTTCGACAGCCTCCAGGACAGGTaGTACAGGACGTCCTCTTCATCAAAATACCCTTTC +
Preference number: 6 (lower is better)
Translates to: GSTLSFDSLQDR*YRTSSSSKYPF
Trigger: GAAAGGGTATTTTGATGAAGAGGACGTCCTGTACAACCTGTCCTGGAGGCTGTCGAAGCTCAGGGTGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp GAACTGGGCCTCTGCGATGCCAGCCAGCTGGCTGGTTaGATAGCAGAGATCGAGTGCTTCTCTCAGAATAAC +
Preference number: 6 (lower is better)
Translates to: ELGLCDASQLAG*IAEIECFSQNN
Trigger: GTTATTCTGAGAGAAGCACTCGATCTCTGCTATCAAACCAGCCAGCTGGCTGGCATCGCAGAGGCCCAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp CCGGATAGCTCTGGTCACATCCTTTGGCTTGTACTCTaGGATGATGGAGAACACCTCCCCAGATTCCCGGTC +
Preference number: 6 (lower is better)
Translates to: PDSSGHILWLVL*DDGEHLPRFPV
Trigger: GACCGGGAATCTGGGGAGGTGTTCTCCATCATCCAAGAGTACAAGCCAAAGGATGTGACCAGAGCTATCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp AGGCTTTTGATCCATTACCCACCGGAAAAGCTGACTTTCCCTTGCTaGGATGCAGAGCCGCATAAGGGCATGGAGAGGGTTGGGCCCTAT +
Preference number: 6 (lower is better)
Translates to: RLLIHYPPEKLTFPC*DAEPHKGMERVGPY
Trigger: ATAGGGCCCAACCCTCTCCATGCCCTTATGCGGCTCTGCATCCAAGCAAGGGAAAGTCAGCTTTTCCGGTGGGTAATGGATCAAAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp GGAGTGTCACCTTCCACGAGAGAAACACTGCGGGGGTCTGCACCCTaGGTCAAGAGAAGAAAAGCTAAGTCAAAGTCCTCGTGTCTCAGG +
Preference number: 6 (lower is better)
Translates to: GVSPSTRETLRGSAP*VKRRKAKSKSSCLR
Trigger: CCTGAGACACGAGGACTTTGACTTAGCTTTTCTTCTCTTGACCAAGGGTGCAGACCCCCGCAGTGTTTCTCTCGTGGAAGGTGACACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp TTTTTGACTGAACCATGCACTTGGCCTCACAGCGCCTaGGGGGCCTGTGGAAATCTTCACACTGCTCATCCT +
Preference number: 6 (lower is better)
Translates to: FLTEPCTWPHSA*GACGNLHTAHP
Trigger: AGGATGAGCAGTGTGAAGATTTCCACAGGCCCCTCAGGCGCTGTGAGGCCAAGTGCATGGTTCAGTCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp CAGAAGCAACCCGTTGATTGCAACCAGGTGCATTTTTaGCTGAACCATGCACTTGGCCTCACAGCGCCTGAG +
Preference number: 6 (lower is better)
Translates to: QKQPVDCNQVHF*LNHALGLTAPE
Trigger: CTCAGGCGCTGTGAGGCCAAGTGCATGGTTCAGTCAAAAATGCACCTGGTTGCAATCAACGGGTTGCTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp TTGATCCATTACCCACCGGAAAAGCTGACTTTCCCTTaGTTGGATGCAGAGCCGCATAAGGGCATGGAGAGG +
Preference number: 6 (lower is better)
Translates to: LIHYPPEKLTFP*LDAEPHKGMER
Trigger: CCTCTCCATGCCCTTATGCGGCTCTGCATCCAAGCAAGGGAAAGTCAGCTTTTCCGGTGGGTAATGGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp TCTCTGGAGTTTGTCTTTCTTTCCTTCTGTGCCAGCTaGTACCTTGGGAGAGTCTCGCTGAGGAGAGTCCTC +
Preference number: 6 (lower is better)
Translates to: SLEFVFLSFCAS*YLGRVSLRRVL
Trigger: GAGGACTCTCCTCAGCGAGACTCTCCCAAGGTAGCAGCTGGCACAGAAGGAAAGAAAGACAAACTCCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp GAGGGTTGGGCCCTATGGTTTCAATGTTTGCACCGATaGAGACGAGCCACTGAACCAACTTGGGCACTTGTT +
Preference number: 6 (lower is better)
Translates to: EGWALWFQCLHR*RRATEPTWALV
Trigger: AACAAGTGCCCAAGTTGGTTCAGTGGCTCGTCTCCATCGGTGCAAACATTGAAACCATAGGGCCCAACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp GAGCCCCTTAGAAAGGGTTGTGTCAGCAGTACCACATaGCAAAGACTTGAAGGACGTCTGGGACTTGAGCTG +
Preference number: 6 (lower is better)
Translates to: EPLRKGCVSSTT*QRLEGRLGLEL
Trigger: CAGCTCAAGTCCCAGACGTCCTTCAAGTCTTTGCCATGTGGTACTGCTGACACAACCCTTTCTAAGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp CCTCAGGTCCTGGAGTTTGTGGACATTGGGATCCAGTaGTTTATAGTGACTGGTGGCCTTGGTGGACTTGGA +
Preference number: 6 (lower is better)
Translates to: PQVLEFVDIGIQ*FIVTGGLGGLG
Trigger: TCCAAGTCCACCAAGGCCACCAGTCACTATAAACCACTGGATCCCAATGTCCACAAACTCCAGGACCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp ACCATGCACTTGGCCTCACAGCGCCTGAGGGGCCTGTaGAAATCTTCACACTGCTCATCCTCACATTTCAAA +
Preference number: 6 (lower is better)
Translates to: TMHLASQRLRGL*KSSHCSSSHFK
Trigger: TTTGAAATGTGAGGATGAGCAGTGTGAAGATTTCCACAGGCCCCTCAGGCGCTGTGAGGCCAAGTGCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp ATCCATTACCCACCGGAAAAGCTGACTTTCCCTTGCTaGGATGCAGAGCCGCATAAGGGCATGGAGAGGGTT +
Preference number: 6 (lower is better)
Translates to: IHYPPEKLTFPC*DAEPHKGMERV
Trigger: AACCCTCTCCATGCCCTTATGCGGCTCTGCATCCAAGCAAGGGAAAGTCAGCTTTTCCGGTGGGTAATGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp CCTTCCACGAGAGAAACACTGCGGGGGTCTGCACCCTaGGTCAAGAGAAGAAAAGCTAAGTCAAAGTCCTCG +
Preference number: 6 (lower is better)
Translates to: PSTRETLRGSAP*VKRRKAKSKSS
Trigger: CGAGGACTTTGACTTAGCTTTTCTTCTCTTGACCAAGGGTGCAGACCCCCGCAGTGTTTCTCTCGTGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp GCAGTGTCTCCAGTAAGGAACATGGCGTTGGGGTCATaGATGCATTTCATCAGCAGTGCCAGCTCTGCTTGG +
Preference number: 6 (lower is better)
Translates to: AVSPVRNMALGS*MHFISSASSAW
Trigger: CCAAGCAGAGCTGGCACTGCTGATGAAATGCATCAATGACCCCAACGCCATGTTCCTTACTGGAGACACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp AAGGTTGACCCGAGCCCGAGTGATGGCAGTGTAGAGTaGCTTCAGCTCTCCATTGAGGAGCTTGTACATCTC +
Preference number: 6 (lower is better)
Translates to: KVDPSPSDGSVE*LQLSIEELVHL
Trigger: GAGATGTACAAGCTCCTCAATGGAGAGCTGAAGCAACTCTACACTGCCATCACTCGGGCTCGGGTCAACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp CGGAAGTCCCGGATAGCTCTGGTCACATCCTTTGGCTaGTACTCTTGGATGATGGAGAACACCTCCCCAGAT +
Preference number: 6 (lower is better)
Translates to: RKSRIALVTSFG*YSWMMENTSPD
Trigger: ATCTGGGGAGGTGTTCTCCATCATCCAAGAGTACAAGCCAAAGGATGTGACCAGAGCTATCCGGGACTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp CTCGACCTGGACCCTCTTTTCCTGGTTCTACTTCCAACCTTCTCTTaGGCAAGATCTGTTTGGACAGCAATGGGCTTCCTGCCTGCTCAG +
Preference number: 6 (lower is better)
Translates to: LDLDPLFLVLLPTFS*ARSVWTAMGFLPAQ
Trigger: CTGAGCAGGCAGGAAGCCCATTGCTGTCCAAACAGATCTTGCCAAAGAGAAGGTTGGAAGTAGAACCAGGAAAAGAGGGTCCAGGTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp TCCAGCAGCACCACTGTATTGATAATGCTGGGGACCAGCGGCGCTTaGCACCTCTTGATGAGAACATTCATGAAGCGGAAGAAGAGCCTC +
Preference number: 6 (lower is better)
Translates to: SSSTTVLIMLGTSGA*HLLMRTFMKRKKSL
Trigger: GAGGCTCTTCTTCCGCTTCATGAATGTTCTCATCAAGAGGTGCAAAGCGCCGCTGGTCCCCAGCATTATCAATACAGTGGTGCTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp TGGCACCTTTGTCCAGCTTTGCTTCAAAGAGCTGGATATTCCCTTTaGAGTGTTTCAGCCTCTTCTGCAGGCCCTGGGTCCACTCACCAT +
Preference number: 6 (lower is better)
Translates to: WHLCPALLQRAGYSL*SVSASSAGPGSTHH
Trigger: ATGGTGAGTGGACCCAGGGCCTGCAGAAGAGGCTGAAACACTCAAAAGGGAATATCCAGCTCTTTGAAGCAAAGCTGGACAAAGGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp CGAGCAGAGAAGTCGATGGCAAGCTCCCACAGCATCCTGGCACCTTaGTCCAGCTTTGCTTCAAAGAGCTGGATATTCCCTTTTGAGTGT +
Preference number: 6 (lower is better)
Translates to: RAEKSMASSHSILAP*SSFASKSWIFPFEC
Trigger: ACACTCAAAAGGGAATATCCAGCTCTTTGAAGCAAAGCTGGACAAAGGTGCCAGGATGCTGTGGGAGCTTGCCATCGACTTCTCTGCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp AAAGATCCAAAGGTTGACCCGAGCCCGAGTGATGGCAGTGTAGAGTaGCTTCAGCTCTCCATTGAGGAGCTTGTACATCTCTGGGTTCAC +
Preference number: 6 (lower is better)
Translates to: KDPKVDPSPSDGSVE*LQLSIEELVHLWVH
Trigger: GTGAACCCAGAGATGTACAAGCTCCTCAATGGAGAGCTGAAGCAACTCTACACTGCCATCACTCGGGCTCGGGTCAACCTTTGGATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp CATTTCCGTGACTTAAGGAACACCAGCTGGTCCTCTACGTCGAGCTaGGAGAGGACGGCCATCATTTCCTTGCTCTTATTTGCACTCAGG +
Preference number: 6 (lower is better)
Translates to: HFRDLRNTSWSSTSS*ERTAIISLLLFALR
Trigger: CCTGAGTGCAAATAAGAGCAAGGAAATGATGGCCGTCCTCTCCAAGCTCGACGTAGAGGACCAGCTGGTGTTCCTTAAGTCACGGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp TCTGTGGACTCCCTGCGGCTGTGTGCACTCTCTTTCTaGAACAGGTCATGGATGTACTCTTTCAAGGCACAC +
Preference number: 6 (lower is better)
Translates to: SVDSLRLCALSF*NRSWMYSFKAH
Trigger: GTGTGCCTTGAAAGAGTACATCCATGACCTGTTTCAGAAAGAGAGTGCACACAGCCGCAGGGAGTCCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp TCACTGAAACGGAAAGCCACGCCTTTCATTATGCTTTaGGCAGTGTCTCCAGTAAGGAACATGGCGTTGGGG +
Preference number: 6 (lower is better)
Translates to: SLKRKATPFIML*AVSPVRNMALG
Trigger: CCCCAACGCCATGTTCCTTACTGGAGACACTGCCCAAAGCATAATGAAAGGCGTGGCTTTCCGTTTCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp TGGGGTTTTCTGACAGCACTCTCTGGTGGAAATGCCTaGGGAAGAGGAGGTTTAGGAACGATTTGCAAAGGC +
Preference number: 6 (lower is better)
Translates to: WGFLTALSGGNA*GRGGLGTICKG
Trigger: GCCTTTGCAAATCGTTCCTAAACCTCCTCTTCCCCAGGCATTTCCACCAGAGAGTGCTGTCAGAAAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp AGCTCGGTAGTATCCCTTCACATAGGTTGGGTCCCATaGGAGACACTCCTTGGCAGCAAGAAAAGCCTCGTT +
Preference number: 6 (lower is better)
Translates to: SSVVSLHIGWVP*ETLLGSKKSLV
Trigger: AACGAGGCTTTTCTTGCTGCCAAGGAGTGTCTCCAATGGGACCCAACCTATGTGAAGGGATACTACCGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078626.8
ENSMUST00000197049.2
CDS CAA 72 bp TCTTGGCGGTTCTTCCGCCTGCTCTCTGTCAGCGCTTaGTTCCAAGCCAAAAGCAGAGCATCGTTCTTCTTA +
Preference number: 6 (lower is better)
Translates to: SWRFFRLLSVSA*FQAKSRASFFL
Trigger: TAAGAAGAACGATGCTCTGCTTTTGGCTTGGAACAAAGCGCTGACAGAGAGCAGGCGGAAGAACCGCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp AAGTCGATGGCAAGCTCCCACAGCATCCTGGCACCTTaGTCCAGCTTTGCTTCAAAGAGCTGGATATTCCCT +
Preference number: 6 (lower is better)
Translates to: KSMASSHSILAP*SSFASKSWIFP
Trigger: AGGGAATATCCAGCTCTTTGAAGCAAAGCTGGACAAAGGTGCCAGGATGCTGTGGGAGCTTGCCATCGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp ATGCTTTGGGCAGTGTCTCCAGTAAGGAACATGGCGTaGGGGTCATTGATGCATTTCATCAGCAGTGCCAGC +
Preference number: 6 (lower is better)
Translates to: MLWAVSPVRNMA*GSLMHFISSAS
Trigger: GCTGGCACTGCTGATGAAATGCATCAATGACCCCAACGCCATGTTCCTTACTGGAGACACTGCCCAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp TTGATAATGCTGGGGACCAGCGGCGCTTTGCACCTCTaGATGAGAACATTCATGAAGCGGAAGAAGAGCCTC +
Preference number: 6 (lower is better)
Translates to: LIMLGTSGALHL*MRTFMKRKKSL
Trigger: GAGGCTCTTCTTCCGCTTCATGAATGTTCTCATCAAGAGGTGCAAAGCGCCGCTGGTCCCCAGCATTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp GGCGTTGGGGTCATTGATGCATTTCATCAGCAGTGCCAGCTCTGCTaGGGTGAAGTCCTGAATCTCATCACCATAAAGCTCATGGATGGA +
Preference number: 6 (lower is better)
Translates to: GVGVIDAFHQQCQLC*GEVLNLITIKLMDG
Trigger: TCCATCCATGAGCTTTATGGTGATGAGATTCAGGACTTCACCCAAGCAGAGCTGGCACTGCTGATGAAATGCATCAATGACCCCAACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp CCTTTCATTATGCTTTGGGCAGTGTCTCCAGTAAGGAACATGGCGTaGGGGTCATTGATGCATTTCATCAGCAGTGCCAGCTCTGCTTGG +
Preference number: 6 (lower is better)
Translates to: PFIMLWAVSPVRNMA*GSLMHFISSASSAW
Trigger: CCAAGCAGAGCTGGCACTGCTGATGAAATGCATCAATGACCCCAACGCCATGTTCCTTACTGGAGACACTGCCCAAAGCATAATGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp AGAGAGCAGGTCACTGAAACGGAAAGCCACGCCTTTCATTATGCTTaGGGCAGTGTCTCCAGTAAGGAACATGGCGTTGGGGTCATTGAT +
Preference number: 6 (lower is better)
Translates to: REQVTETESHAFHYA*GSVSSKEHGVGVID
Trigger: ATCAATGACCCCAACGCCATGTTCCTTACTGGAGACACTGCCCAAAGCATAATGAAAGGCGTGGCTTTCCGTTTCAGTGACCTGCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp TTCTGCTGGCATAGTGGAACAGAGAGAGCAGGTCACTaGAACGGAAAGCCACGCCTTTCATTATGCTTTGGG +
Preference number: 6 (lower is better)
Translates to: FCWHSGTERAGH*NGKPRLSLCFG
Trigger: CCCAAAGCATAATGAAAGGCGTGGCTTTCCGTTTCAGTGACCTGCTCTCTCTGTTCCACTATGCCAGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp TTCTGTAGCTTTCTCCTCCTCATTGTAGTTCCCATCTaGCTCAACCTCTTCATCATCCTCTTCCCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: FCSFLLLIVVPI*LNLFIILFPAG
Trigger: CCCAGCTGGGAAGAGGATGATGAAGAGGTTGAGGCAGATGGGAACTACAATGAGGAGGAGAAAGCTACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp TCTTGGGCTTTCGAACAGCACATTGCTTGTCTACTGTaGTTCTGCTGGCATAGTGGAACAGAGAGAGCAGGT +
Preference number: 6 (lower is better)
Translates to: SWAFEQHIACLL*FCWHSGTERAG
Trigger: ACCTGCTCTCTCTGTTCCACTATGCCAGCAGAAGCACAGTAGACAAGCAATGTGCTGTTCGAAAGCCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp GTCAATCACGGCGTACTCAAGCTCGCCCACTCGGAATaGATACTCCACCGTTGCTGTCATATCATTGAGAAT +
Preference number: 6 (lower is better)
Translates to: VNHGVLKLAHSE*ILHRCCHIIEN
Trigger: ATTCTCAATGATATGACAGCAACGGTGGAGTATCCATTCCGAGTGGGCGAGCTTGAGTACGCCGTGATTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp CAAGGCACACCGGAAGGAGCGAAAGGACTTGTAATTTaGCTTGAGGATGTCTTTACAGGCCATGGGGTTTTC +
Preference number: 6 (lower is better)
Translates to: QGTPEGAKGLVI*LEDVFTGHGVF
Trigger: GAAAACCCCATGGCCTGTAAAGACATCCTCAAGCCAAATTACAAGTCCTTTCGCTCCTTCCGGTGTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp CAGCTGATGGATCCTCTTGGGCTTTCGAACAGCACATaGCTTGTCTACTGTGCTTCTGCTGGCATAGTGGAA +
Preference number: 6 (lower is better)
Translates to: QLMDPLGLSNST*LVYCASAGIVE
Trigger: TTCCACTATGCCAGCAGAAGCACAGTAGACAAGCAATGTGCTGTTCGAAAGCCCAAGAGGATCCATCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp TCTACGTCGAGCTTGGAGAGGACGGCCATCATTTCCTaGCTCTTATTTGCACTCAGGTACTTTGCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: STSSLERTAIIS*LLFALRYFAAA
Trigger: AGCTGCTGCAAAGTACCTGAGTGCAAATAAGAGCAAGGAAATGATGGCCGTCCTCTCCAAGCTCGACGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp GACTTAAGGAACACCAGCTGGTCCTCTACGTCGAGCTaGGAGAGGACGGCCATCATTTCCTTGCTCTTATTT +
Preference number: 6 (lower is better)
Translates to: DLRNTSWSSTSS*ERTAIISLLLF
Trigger: AAATAAGAGCAAGGAAATGATGGCCGTCCTCTCCAAGCTCGACGTAGAGGACCAGCTGGTGTTCCTTAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp ACCACTGTATTGATAATGCTGGGGACCAGCGGCGCTTaGCACCTCTTGATGAGAACATTCATGAAGCGGAAG +
Preference number: 6 (lower is better)
Translates to: TTVLIMLGTSGA*HLLMRTFMKRK
Trigger: CTTCCGCTTCATGAATGTTCTCATCAAGAGGTGCAAAGCGCCGCTGGTCCCCAGCATTATCAATACAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp GCCAGCATCGTCTCTGTGGTTGATGTGTTCTTTCCACTCAGGCTTTaGATCCATTACCCACCGGAAAAGCTGACTTTCCCTTGCTTGGAT +
Preference number: 6 (lower is better)
Translates to: ASIVSVVDVFFPLRL*IHYPPEKLTFPCLD
Trigger: ATCCAAGCAAGGGAAAGTCAGCTTTTCCGGTGGGTAATGGATCAAAAGCCTGAGTGGAAAGAACACATCAACCACAGAGACGATGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp AGCAGCAGAAGCACTTCAGGCCACTTCTGTCTTTCCAGTAAGAATTaGATGAAGGTGGTGGCACAGTCTCGGTTAACGTCACAAACCAGG +
Preference number: 6 (lower is better)
Translates to: SSRSTSGHFCLSSKN*MKVVAQSRLTSQTR
Trigger: CCTGGTTTGTGACGTTAACCGAGACTGTGCCACCACCTTCATCAAATTCTTACTGGAAAGACAGAAGTGGCCTGAAGTGCTTCTGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp GAACACCTCAAATGTCACATACACCCGGGGATCACTGTCCCCTGTTaGTGTTTCTGTAGCTTTCTCCTCCTCATTGTAGTTCCCATCTGC +
Preference number: 6 (lower is better)
Translates to: EHLKCHIHPGITVPC*CFCSFLLLIVVPIC
Trigger: GCAGATGGGAACTACAATGAGGAGGAGAAAGCTACAGAAACACAAACAGGGGACAGTGATCCCCGGGTGTATGTGACATTTGAGGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp ATTCTGGTACAGCTGATGGATCCTCTTGGGCTTTCGAACAGCACATaGCTTGTCTACTGTGCTTCTGCTGGCATAGTGGAACAGAGAGAG +
Preference number: 6 (lower is better)
Translates to: ILVQLMDPLGLSNST*LVYCASAGIVEQRE
Trigger: CTCTCTCTGTTCCACTATGCCAGCAGAAGCACAGTAGACAAGCAATGTGCTGTTCGAAAGCCCAAGAGGATCCATCAGCTGTACCAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp CATGCAGGACAGTGCAGCCAGCATCGTCTCTGTGGTTaGTGTGTTCTTTCCACTCAGGCTTTTGATCCATTA +
Preference number: 6 (lower is better)
Translates to: HAGQCSQHRLCG*CVLSTQAFDPL
Trigger: TAATGGATCAAAAGCCTGAGTGGAAAGAACACATCAACCACAGAGACGATGCTGGCTGCACTGTCCTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp GCTTGCAGTGATCTAAGACAATGTCCCAGATGCGGATaGTTTCTGTATAGACCCGCCCTGATTTTTCCAGGG +
Preference number: 6 (lower is better)
Translates to: ACSDLRQCPRCG*FLYRPALIFPG
Trigger: CCCTGGAAAAATCAGGGCGGGTCTATACAGAAATCATCCGCATCTGGGACATTGTCTTAGATCACTGCAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp GCTGGCTGCTTCATAGAGAGCTTCTACCATTCCAGCTaGGTGGTTGAGCATGTCAAACTTGATGAAGGCATC +
Preference number: 6 (lower is better)
Translates to: AGCFIESFYHSS*VVEHVKLDEGI
Trigger: GATGCCTTCATCAAGTTTGACATGCTCAACCACTCAGCTGGAATGGTAGAAGCTCTCTATGAAGCAGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp CACACCGGAAGGAGCGAAAGGACTTGTAATTTGGCTTaGGGATGTCTTTACAGGCCATGGGGTTTTCTGACA +
Preference number: 6 (lower is better)
Translates to: HTGRSERTCNLA*GCLYRPWGFLT
Trigger: TGTCAGAAAACCCCATGGCCTGTAAAGACATCCTCAAGCCAAATTACAAGTCCTTTCGCTCCTTCCGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp GCCAGCCAGCTGGCTGGTTTGATAGCAGAGATCGAGTaGTTCTCTCAGAATAACCTTTGTGTGTTCTATGTC +
Preference number: 6 (lower is better)
Translates to: ASQLAGLIAEIE*FSQNNLCVFYV
Trigger: GACATAGAACACACAAAGGTTATTCTGAGAGAAGCACTCGATCTCTGCTATCAAACCAGCCAGCTGGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp GTGAAGATCCCAACAAGAAAATCAGGAACCTGCAGTTaGTCTGGGCTTCTCTGCAAAAGTCGTAGACCCTCA +
Preference number: 6 (lower is better)
Translates to: VKIPTRKSGTCS*SGLLCKSRRPS
Trigger: TGAGGGTCTACGACTTTTGCAGAGAAGCCCAGACCAACTGCAGGTTCCTGATTTTCTTGTTGGGATCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078626.8
ENSMUST00000197049.2
CDS CCA 72 bp TCTATGAGCTTCTTCGTGCGCTTCAGCATGCCCTTCTaGAAAAGGAGATGCATCAATGTGTTCCCATTGCTG +
Preference number: 6 (lower is better)
Translates to: SMSFFVRFSMPF*KRRCINVFPLL
Trigger: CAGCAATGGGAACACATTGATGCATCTCCTTTTCCAGAAGGGCATGCTGAAGCGCACGAAGAAGCTCATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp TGGCAACAAGAATCACCTGGTGGGCACCAAATTCGATaGGCTGAGTTTTTCTTTTGTTCCCTCGCAGCAAGA +
Preference number: 6 (lower is better)
Translates to: WQQESPGGHQIR*AEFFFCSLAAR
Trigger: TCTTGCTGCGAGGGAACAAAAGAAAAACTCAGCCCATCGAATTTGGTGCCCACCAGGTGATTCTTGTTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp AGTTGTAAAGGAGGACATCGTCAAACTCCAGCCCTTTaGCCTCATAAACAGTTAGCACGAGAGCTAACCCCA +
Preference number: 6 (lower is better)
Translates to: SCKGGHRQTPAL*PHKQLARELTP
Trigger: TGGGGTTAGCTCTCGTGCTAACTGTTTATGAGGCCAAAGGGCTGGAGTTTGACGATGTCCTCCTTTACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp AGCTCGCCCACTCGGAATGGATACTCCACCGTTGCTGTCATATCATaGAGAATGTTTAAGGCCATGTTGGTACTGAAGCTGTGGAACTTC +
Preference number: 6 (lower is better)
Translates to: SSPTRNGYSTVAVIS*RMFKAMLVLKLWNF
Trigger: GAAGTTCCACAGCTTCAGTACCAACATGGCCTTAAACATTCTCAATGATATGACAGCAACGGTGGAGTATCCATTCCGAGTGGGCGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp CAGGACGTCCTCTTCATCAAAATACCCTTTCTGGGACCTGATCTGTaGATACAGGCAGAAGAGGCTGTAGATCTCACTCCGATCTTCCTT +
Preference number: 6 (lower is better)
Translates to: QDVLFIKIPFLGPDL*IQAEEAVDLTPIFL
Trigger: AAGGAAGATCGGAGTGAGATCTACAGCCTCTTCTGCCTGTATCAACAGATCAGGTCCCAGAAAGGGTATTTTGATGAAGAGGACGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp AGAGGACGGCCATCATTTCCTTGCTCTTATTTGCACTCAGGTACTTaGCAGCAGCTTCCAGGTAAAACTGACTGGCAGAATAGGAGAGCT +
Preference number: 6 (lower is better)
Translates to: RGRPSFPCSYLHSGT*QQLPGKTDWQNRRA
Trigger: AGCTCTCCTATTCTGCCAGTCAGTTTTACCTGGAAGCTGCTGCAAAGTACCTGAGTGCAAATAAGAGCAAGGAAATGATGGCCGTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp ATCCGGTGTCTAACACCTTTGCCTGCTTTGTTCTTCAGGTTGAAGTaGATGTCAAACTTCACCAGCAGATCTATGAGCTTCTTCGTGCGC +
Preference number: 6 (lower is better)
Translates to: IRCLTPLPALFFRLK*MSNFTSRSMSFFVR
Trigger: GCGCACGAAGAAGCTCATAGATCTGCTGGTGAAGTTTGACATCAACTTCAACCTGAAGAACAAAGCAGGCAAAGGTGTTAGACACCGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp GCAGCAAGATTGCCAAGTCACTTACACTACAAGAATCCAAGAGAGTaGGCTTGGGACCATCAAAGAGTCCAGAATCTCTTGGAAGGCGAT +
Preference number: 6 (lower is better)
Translates to: AARLPSHLHYKNPRE*AWDHQRVQNLLEGD
Trigger: ATCGCCTTCCAAGAGATTCTGGACTCTTTGATGGTCCCAAGCCAACTCTCTTGGATTCTTGTAGTGTAAGTGACTTGGCAATCTTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp GGACGTCCTCTTCATCAAAATACCCTTTCTGGGACCTaGTCTGTTGATACAGGCAGAAGAGGCTGTAGATCT +
Preference number: 6 (lower is better)
Translates to: GRPLHQNTLSGT*SVDTGRRGCRS
Trigger: AGATCTACAGCCTCTTCTGCCTGTATCAACAGATCAGGTCCCAGAAAGGGTATTTTGATGAAGAGGACGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp TATCAAAGTCTTGCAGACAGGCTTGAATCTCCTGCATaGTCCAGTTCTCCTGATTATCACTGGCTACTCCCA +
Preference number: 6 (lower is better)
Translates to: YQSLADRLESPA*SSSPDYHWLLP
Trigger: TGGGAGTAGCCAGTGATAATCAGGAGAACTGGACCATGCAGGAGATTCAAGCCTGTCTGCAAGACTTTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp ATCCTGGCACCTTTGTCCAGCTTTGCTTCAAAGAGCTaGATATTCCCTTTTGAGTGTTTCAGCCTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: ILAPLSSFASKS*IFPFECFSLFC
Trigger: GCAGAAGAGGCTGAAACACTCAAAAGGGAATATCCAGCTCTTTGAAGCAAAGCTGGACAAAGGTGCCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp GAGATCTGTAATTCTGGTACAGCTGATGGATCCTCTTaGGCTTTCGAACAGCACATTGCTTGTCTACTGTGC +
Preference number: 6 (lower is better)
Translates to: EICNSGTADGSS*AFEQHIACLLC
Trigger: GCACAGTAGACAAGCAATGTGCTGTTCGAAAGCCCAAGAGGATCCATCAGCTGTACCAGAATTACAGATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp TGGGCCCTGGGTCATTCTGGGCTATCTGGCAATATTTaGCATCCACCTGAAAAATTCCAAAGAACTCAAAGC +
Preference number: 6 (lower is better)
Translates to: WALGHSGLSGNI*HPPEKFQRTQS
Trigger: GCTTTGAGTTCTTTGGAATTTTTCAGGTGGATGCCAAATATTGCCAGATAGCCCAGAATGACCCAGGGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp GTCTCTGTGGTTGATGTGTTCTTTCCACTCAGGCTTTaGATCCATTACCCACCGGAAAAGCTGACTTTCCCT +
Preference number: 6 (lower is better)
Translates to: VSVVDVFFPLRL*IHYPPEKLTFP
Trigger: AGGGAAAGTCAGCTTTTCCGGTGGGTAATGGATCAAAAGCCTGAGTGGAAAGAACACATCAACCACAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp CTCCCAGGTCATGTTATCAAAGTCTTGCAGACAGGCTaGAATCTCCTGCATGGTCCAGTTCTCCTGATTATC +
Preference number: 6 (lower is better)
Translates to: LPGHVIKVLQTG*NLLHGPVLLII
Trigger: GATAATCAGGAGAACTGGACCATGCAGGAGATTCAAGCCTGTCTGCAAGACTTTGATAACATGACCTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp TCTTGCTCCTCATCTATACCATCCACCGTTTCCACTTaGATGGAACCCTCCTCTTCCTCATGTTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: SCSSSIPSTVST*MEPSSSSCSSS
Trigger: GGAAGAAGAACATGAGGAAGAGGAGGGTTCCATCAAAGTGGAAACGGTGGATGGTATAGATGAGGAGCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp GTCATTGATGCATTTCATCAGCAGTGCCAGCTCTGCTaGGGTGAAGTCCTGAATCTCATCACCATAAAGCTC +
Preference number: 6 (lower is better)
Translates to: VIDAFHQQCQLC*GEVLNLITIKL
Trigger: GAGCTTTATGGTGATGAGATTCAGGACTTCACCCAAGCAGAGCTGGCACTGCTGATGAAATGCATCAATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp TCAAGATCTTCAGCTAAGACATTAGGGAACACTTTCTaGGCCTCCAGAAGCAACCCGTTGATTGCAACCAGG +
Preference number: 6 (lower is better)
Translates to: SRSSAKTLGNTF*ASRSNPLIATR
Trigger: CCTGGTTGCAATCAACGGGTTGCTTCTGGAGGCCAAGAAAGTGTTCCCTAATGTCTTAGCTGAAGATCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp GATAGGCCCTTAGAACTGGATGCCAGCTTTTCCAGGTaGCTGTTGATTTTGTCAATCGCTCTGAAGTTCTTG +
Preference number: 6 (lower is better)
Translates to: DRPLELDASFSR*LLILSIALKFL
Trigger: CAAGAACTTCAGAGCGATTGACAAAATCAACAGTCACCTGGAAAAGCTGGCATCCAGTTCTAAGGGCCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp ATCGTTGTGAAGATCCCAACAAGAAAATCAGGAACCTaGAGTTGGTCTGGGCTTCTCTGCAAAAGTCGTAGA +
Preference number: 6 (lower is better)
Translates to: IVVKIPTRKSGT*SWSGLLCKSRR
Trigger: TCTACGACTTTTGCAGAGAAGCCCAGACCAACTGCAGGTTCCTGATTTTCTTGTTGGGATCTTCACAACGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078626.8
ENSMUST00000197049.2
CDS CCA 72 bp GAATCTCCTGCATGGTCCAGTTCTCCTGATTATCACTaGCTACTCCCAATCTGTTACCAACTGGAACAAGTT +
Preference number: 6 (lower is better)
Translates to: ESPAWSSSPDYH*LLPICYQLEQV
Trigger: AACTTGTTCCAGTTGGTAACAGATTGGGAGTAGCCAGTGATAATCAGGAGAACTGGACCATGCAGGAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp AGTTGGCTTGGGACCATCAAAGAGTCCAGAATCTCTTaGAAGGCGATCAAAGGATTCTGGGAAATAGAACTG +
Preference number: 6 (lower is better)
Translates to: SWLGTIKESRIS*KAIKGFWEIEL
Trigger: CAGTTCTATTTCCCAGAATCCTTTGATCGCCTTCCAAGAGATTCTGGACTCTTTGATGGTCCCAAGCCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp TGCCAAGTCACTTACACTACAAGAATCCAAGAGAGTTaGCTTGGGACCATCAAAGAGTCCAGAATCTCTTGG +
Preference number: 6 (lower is better)
Translates to: CQVTYTTRIQES*LGTIKESRISW
Trigger: CCAAGAGATTCTGGACTCTTTGATGGTCCCAAGCCAACTCTCTTGGATTCTTGTAGTGTAAGTGACTTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp ACCGATGGAGACGAGCCACTGAACCAACTTGGGCACTaGTTCCAGTTTCTCATAAAACCCAATGAAGACATA +
Preference number: 6 (lower is better)
Translates to: TDGDEPLNQLGH*FQFLIKPNEDI
Trigger: TATGTCTTCATTGGGTTTTATGAGAAACTGGAACAAGTGCCCAAGTTGGTTCAGTGGCTCGTCTCCATCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp AGTACACTCAATCTCCCAGGTCATGTTATCAAAGTCTaGCAGACAGGCTTGAATCTCCTGCATGGTCCAGTT +
Preference number: 6 (lower is better)
Translates to: STLNLPGHVIKV*QTGLNLLHGPV
Trigger: AACTGGACCATGCAGGAGATTCAAGCCTGTCTGCAAGACTTTGATAACATGACCTGGGAGATTGAGTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp AAATGTCACATACACCCGGGGATCACTGTCCCCTGTTaGTGTTTCTGTAGCTTTCTCCTCCTCATTGTAGTT +
Preference number: 6 (lower is better)
Translates to: KCHIHPGITVPC*CFCSFLLLIVV
Trigger: AACTACAATGAGGAGGAGAAAGCTACAGAAACACAAACAGGGGACAGTGATCCCCGGGTGTATGTGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp GAACTTCTCCCTTTGATCATTTTGGGCCATATCTCATaGGTGAACACCTCAAATGTCACATACACCCGGGGA +
Preference number: 6 (lower is better)
Translates to: ELLPLIILGHIS*VNTSNVTYTRG
Trigger: TCCCCGGGTGTATGTGACATTTGAGGTGTTCACCAATGAGATATGGCCCAAAATGATCAAAGGGAGAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp GTCTTAGCCAGTTCCAAATACTGCAGCTCCTTCTCCTaGGGGCTGAATTTCTTGGATTTCATATTCAGGGCA +
Preference number: 6 (lower is better)
Translates to: VLASSKYCSSFS*GLNFLDFIFRA
Trigger: TGCCCTGAATATGAAATCCAAGAAATTCAGCCCCAAGGAGAAGGAGCTGCAGTATTTGGAACTGGCTAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp TTCCACTGCAATAGCAGCTTCCTCAAAAAGCTCCTCTaGGCAGTACATTCTGAGGGCAAGATCAAATTCCTG +
Preference number: 6 (lower is better)
Translates to: FHCNSSFLKKLL*AVHSEGKIKFL
Trigger: CAGGAATTTGATCTTGCCCTCAGAATGTACTGCCAAGAGGAGCTTTTTGAGGAAGCTGCTATTGCAGTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp GCCCTTCTGGAAAAGGAGATGCATCAATGTGTTCCCATTGCTGTCTaGGACGTTAGGATTAAGGTAGTAAAATTCGGTAGGGTTGGACAA +
Preference number: 6 (lower is better)
Translates to: ALLEKEMHQCVPIAV*DVRIKVVKFGRVGQ
Trigger: TTGTCCAACCCTACCGAATTTTACTACCTTAATCCTAACGTCCAAGACAGCAATGGGAACACATTGATGCATCTCCTTTTCCAGAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp TACTCCACCGTTGCTGTCATATCATTGAGAATGTTTAAGGCCATGTaGGTACTGAAGCTGTGGAACTTCATGATGCTGTACTCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: YSTVAVISLRMFKAM*VLKLWNFMMLYSVS
Trigger: GGAGACAGAGTACAGCATCATGAAGTTCCACAGCTTCAGTACCAACATGGCCTTAAACATTCTCAATGATATGACAGCAACGGTGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp AAGATTGCCAAGTCACTTACACTACAAGAATCCAAGAGAGTTGGCTaGGGACCATCAAAGAGTCCAGAATCTCTTGGAAGGCGATCAAAG +
Preference number: 6 (lower is better)
Translates to: KIAKSLTLQESKRVG*GPSKSPESLGRRSK
Trigger: CTTTGATCGCCTTCCAAGAGATTCTGGACTCTTTGATGGTCCCAAGCCAACTCTCTTGGATTCTTGTAGTGTAAGTGACTTGGCAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp CAAATTCGATGGGCTGAGTTTTTCTTTTGTTCCCTCGCAGCAAGATaGCCAAGTCACTTACACTACAAGAATCCAAGAGAGTTGGCTTGG +
Preference number: 6 (lower is better)
Translates to: QIRWAEFFFCSLAAR*PSHLHYKNPRELAW
Trigger: CCAAGCCAACTCTCTTGGATTCTTGTAGTGTAAGTGACTTGGCAATCTTGCTGCGAGGGAACAAAAGAAAAACTCAGCCCATCGAATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp GGCAAGATCAAATTCCTGAATCTGCTCAAAGCATCTGAAAGCATCTaGGAAGCACTGGCTTCGCTTATAGAAATAGGCCGCGTCTCTTAT +
Preference number: 6 (lower is better)
Translates to: GKIKFLNLLKASESI*EALASLIEIGRVSY
Trigger: ATAAGAGACGCGGCCTATTTCTATAAGCGAAGCCAGTGCTTCCAAGATGCTTTCAGATGCTTTGAGCAGATTCAGGAATTTGATCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp CCAAAGAACTCAAAGCAAGATTTGACCATTTCCTTCTCAGCATTGTaGGTCACGTTTTTAAGGGCCCTGACCAGATTGAGAAGGACTTCC +
Preference number: 6 (lower is better)
Translates to: PKNSKQDLTISFSAL*VTFLRALTRLRRTS
Trigger: GGAAGTCCTTCTCAATCTGGTCAGGGCCCTTAAAAACGTGACCAACAATGCTGAGAAGGAAATGGTCAAATCTTGCTTTGAGTTCTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp GGGCAAGATCAAATTCCTGAATCTGCTCAAAGCATCTaGAAGCATCTTGGAAGCACTGGCTTCGCTTATAGA +
Preference number: 6 (lower is better)
Translates to: GQDQIPESAQSI*KHLGSTGFAYR
Trigger: TCTATAAGCGAAGCCAGTGCTTCCAAGATGCTTTCAGATGCTTTGAGCAGATTCAGGAATTTGATCTTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp AGCATGTCAAACTTGATGAAGGCATCTCTAAGCTTCTaGAAGTCTCTCAGGATAATCCCTAGCAGGAACTGG +
Preference number: 6 (lower is better)
Translates to: SMSNLMKASLSF*KSLRIIPSRNW
Trigger: CCAGTTCCTGCTAGGGATTATCCTGAGAGACTTTCAGAAGCTTAGAGATGCCTTCATCAAGTTTGACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp TTATCTCGGTCTTCCTGGGCCAACTCATCTAATTCATaGGTCTCATCTTCACCAAAATCCCACTCTGAGTCA +
Preference number: 6 (lower is better)
Translates to: LSRSSWANSSNS*VSSSPKSHSES
Trigger: TGACTCAGAGTGGGATTTTGGTGAAGATGAGACTCATGAATTAGATGAGTTGGCCCAGGAAGACCGAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp GGGCTGAGTTTTTCTTTTGTTCCCTCGCAGCAAGATTaGCAAGTCACTTACACTACAAGAATCCAAGAGAGT +
Preference number: 6 (lower is better)
Translates to: GLSFSFVPSQQD*QVTYTTRIQES
Trigger: ACTCTCTTGGATTCTTGTAGTGTAAGTGACTTGGCAATCTTGCTGCGAGGGAACAAAAGAAAAACTCAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp AATTCGGTAGGGTTGGACAAGAATAAGTCCAACAGGTaGCTCAGGAAGTTAAAGCCAATGTCAGCGTTAATG +
Preference number: 6 (lower is better)
Translates to: NSVGLDKNKSNR*LRKLKPMSALM
Trigger: CATTAACGCTGACATTGGCTTTAACTTCCTGAGCCACCTGTTGGACTTATTCTTGTCCAACCCTACCGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp TTGAGAATGTTTAAGGCCATGTTGGTACTGAAGCTGTaGAACTTCATGATGCTGTACTCTGTCTCCACAGCA +
Preference number: 6 (lower is better)
Translates to: LRMFKAMLVLKL*NFMMLYSVSTA
Trigger: TGCTGTGGAGACAGAGTACAGCATCATGAAGTTCCACAGCTTCAGTACCAACATGGCCTTAAACATTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp CGGTGTCTAACACCTTTGCCTGCTTTGTTCTTCAGGTaGAAGTTGATGTCAAACTTCACCAGCAGATCTATG +
Preference number: 6 (lower is better)
Translates to: RCLTPLPALFFR*KLMSNFTSRSM
Trigger: CATAGATCTGCTGGTGAAGTTTGACATCAACTTCAACCTGAAGAACAAAGCAGGCAAAGGTGTTAGACACCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp ACTCGGAATGGATACTCCACCGTTGCTGTCATATCATaGAGAATGTTTAAGGCCATGTTGGTACTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: TRNGYSTVAVIS*RMFKAMLVLKL
Trigger: CAGCTTCAGTACCAACATGGCCTTAAACATTCTCAATGATATGACAGCAACGGTGGAGTATCCATTCCGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp AAGTCACTTACACTACAAGAATCCAAGAGAGTTGGCTaGGGACCATCAAAGAGTCCAGAATCTCTTGGAAGG +
Preference number: 6 (lower is better)
Translates to: KSLTLQESKRVG*GPSKSPESLGR
Trigger: CCTTCCAAGAGATTCTGGACTCTTTGATGGTCCCAAGCCAACTCTCTTGGATTCTTGTAGTGTAAGTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp TTGCCAAGTCACTTACACTACAAGAATCCAAGAGAGTaGGCTTGGGACCATCAAAGAGTCCAGAATCTCTTG +
Preference number: 6 (lower is better)
Translates to: LPSHLHYKNPRE*AWDHQRVQNLL
Trigger: CAAGAGATTCTGGACTCTTTGATGGTCCCAAGCCAACTCTCTTGGATTCTTGTAGTGTAAGTGACTTGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp TGGGCTGAGTTTTTCTTTTGTTCCCTCGCAGCAAGATaGCCAAGTCACTTACACTACAAGAATCCAAGAGAG +
Preference number: 6 (lower is better)
Translates to: WAEFFFCSLAAR*PSHLHYKNPRE
Trigger: CTCTCTTGGATTCTTGTAGTGTAAGTGACTTGGCAATCTTGCTGCGAGGGAACAAAAGAAAAACTCAGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp AAATTCCTGAATCTGCTCAAAGCATCTGAAAGCATCTaGGAAGCACTGGCTTCGCTTATAGAAATAGGCCGC +
Preference number: 6 (lower is better)
Translates to: KFLNLLKASESI*EALASLIEIGR
Trigger: GCGGCCTATTTCTATAAGCGAAGCCAGTGCTTCCAAGATGCTTTCAGATGCTTTGAGCAGATTCAGGAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp CCATCATTTCCTTGCTCTTATTTGCACTCAGGTACTTaGCAGCAGCTTCCAGGTAAAACTGACTGGCAGAAT +
Preference number: 6 (lower is better)
Translates to: PSFPCSYLHSGT*QQLPGKTDWQN
Trigger: ATTCTGCCAGTCAGTTTTACCTGGAAGCTGCTGCAAAGTACCTGAGTGCAAATAAGAGCAAGGAAATGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp AATGTTTGCACCGATGGAGACGAGCCACTGAACCAACTTGGGCACTaGTTCCAGTTTCTCATAAAACCCAATGAAGACATACTTCTCAAA +
Preference number: 6 (lower is better)
Translates to: NVCTDGDEPLNQLGH*FQFLIKPNEDILLK
Trigger: TTTGAGAAGTATGTCTTCATTGGGTTTTATGAGAAACTGGAACAAGTGCCCAAGTTGGTTCAGTGGCTCGTCTCCATCGGTGCAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp AGAGCATCGTTCTTCTTAATCCGGTGTCTAACACCTTTGCCTGCTTaGTTCTTCAGGTTGAAGTTGATGTCAAACTTCACCAGCAGATCT +
Preference number: 6 (lower is better)
Translates to: RASFFLIRCLTPLPA*FFRLKLMSNFTSRS
Trigger: AGATCTGCTGGTGAAGTTTGACATCAACTTCAACCTGAAGAACAAAGCAGGCAAAGGTGTTAGACACCGGATTAAGAAGAACGATGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp TTCATACTTTTCCACTGCAATAGCAGCTTCCTCAAAAAGCTCCTCTaGGCAGTACATTCTGAGGGCAAGATCAAATTCCTGAATCTGCTC +
Preference number: 6 (lower is better)
Translates to: FILFHCNSSFLKKLL*AVHSEGKIKFLNLL
Trigger: GAGCAGATTCAGGAATTTGATCTTGCCCTCAGAATGTACTGCCAAGAGGAGCTTTTTGAGGAAGCTGCTATTGCAGTGGAAAAGTATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp TCCATTTCTTCAAGATCTTCAGCTAAGACATTAGGGAACACTTTCTaGGCCTCCAGAAGCAACCCGTTGATTGCAACCAGGTGCATTTTT +
Preference number: 6 (lower is better)
Translates to: SISSRSSAKTLGNTF*ASRSNPLIATRCIF
Trigger: AAAAATGCACCTGGTTGCAATCAACGGGTTGCTTCTGGAGGCCAAGAAAGTGTTCCCTAATGTCTTAGCTGAAGATCTTGAAGAAATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp AACTCTGCAAAACAATGGAGTCACTGCTCATCGTTGTaGAGATCCCAACAAGAAAATCAGGAACCTGCAGTT +
Preference number: 6 (lower is better)
Translates to: NSAKQWSHCSSL*RSQQENQEPAV
Trigger: AACTGCAGGTTCCTGATTTTCTTGTTGGGATCTTCACAACGATGAGCAGTGACTCCATTGTTTTGCAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CCA 72 bp GGTAAAACTGACTGGCAGAATAGGAGAGCTTGGGAATaGGAAAGGTCTTGTTCTTCAGCATTTCTTCATACT +
Preference number: 6 (lower is better)
Translates to: GKTDWQNRRAWE*ERSCSSAFLHT
Trigger: AGTATGAAGAAATGCTGAAGAACAAGACCTTTCCCATTCCCAAGCTCTCCTATTCTGCCAGTCAGTTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp AGAGCATCGTTCTTCTTAATCCGGTGTCTAACACCTTaGCCTGCTTTGTTCTTCAGGTTGAAGTTGATGTCA +
Preference number: 6 (lower is better)
Translates to: RASFFLIRCLTP*PALFFRLKLMS
Trigger: TGACATCAACTTCAACCTGAAGAACAAAGCAGGCAAAGGTGTTAGACACCGGATTAAGAAGAACGATGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp CGCTTTTGGATTTTCATGTTAGCTGATACCTGTCCTTaGTTGATACCCTTCAGCTTCTTTCGAAGGACACAG +
Preference number: 6 (lower is better)
Translates to: RFWIFMLADTCP*LIPFSFFRRTQ
Trigger: CTGTGTCCTTCGAAAGAAGCTGAAGGGTATCAACAAAGGACAGGTATCAGCTAACATGAAAATCCAAAAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp TCAAAGCAAGATTTGACCATTTCCTTCTCAGCATTGTaGGTCACGTTTTTAAGGGCCCTGACCAGATTGAGA +
Preference number: 6 (lower is better)
Translates to: SKQDLTISFSAL*VTFLRALTRLR
Trigger: TCTCAATCTGGTCAGGGCCCTTAAAAACGTGACCAACAATGCTGAGAAGGAAATGGTCAAATCTTGCTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp AACTCAAAGCAAGATTTGACCATTTCCTTCTCAGCATaGTTGGTCACGTTTTTAAGGGCCCTGACCAGATTG +
Preference number: 6 (lower is better)
Translates to: NSKQDLTISFSA*LVTFLRALTRL
Trigger: CAATCTGGTCAGGGCCCTTAAAAACGTGACCAACAATGCTGAGAAGGAAATGGTCAAATCTTGCTTTGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp TTCTTAATCCGGTGTCTAACACCTTTGCCTGCTTTGTTCTTCAGGTaGAAGTTGATGTCAAACTTCACCAGCAGATCTATGAGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: FLIRCLTPLPALFFR*KLMSNFTSRSMSFF
Trigger: GAAGAAGCTCATAGATCTGCTGGTGAAGTTTGACATCAACTTCAACCTGAAGAACAAAGCAGGCAAAGGTGTTAGACACCGGATTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp AATCCAAGAGAGTTGGCTTGGGACCATCAAAGAGTCCAGAATCTCTaGGAAGGCGATCAAAGGATTCTGGGAAATAGAACTGAAGTAAAT +
Preference number: 6 (lower is better)
Translates to: NPRELAWDHQRVQNL*EGDQRILGNRTEVN
Trigger: ATTTACTTCAGTTCTATTTCCCAGAATCCTTTGATCGCCTTCCAAGAGATTCTGGACTCTTTGATGGTCCCAAGCCAACTCTCTTGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 90 bp ATTCCAAAGAACTCAAAGCAAGATTTGACCATTTCCTTCTCAGCATaGTTGGTCACGTTTTTAAGGGCCCTGACCAGATTGAGAAGGACT +
Preference number: 6 (lower is better)
Translates to: IPKNSKQDLTISFSA*LVTFLRALTRLRRT
Trigger: AGTCCTTCTCAATCTGGTCAGGGCCCTTAAAAACGTGACCAACAATGCTGAGAAGGAAATGGTCAAATCTTGCTTTGAGTTCTTTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp TTCTCAAAAAGACTTTGTAGTGACAACTCAGAGACATaGATGTTGCTTGGCAGCCTGTCTTTCTTTGCTGAC +
Preference number: 6 (lower is better)
Translates to: FSKRLCSDNSET*MLLGSLSFFAD
Trigger: GTCAGCAAAGAAAGACAGGCTGCCAAGCAACATTCATGTCTCTGAGTTGTCACTACAAAGTCTTTTTGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp GAAAAGGAGATGCATCAATGTGTTCCCATTGCTGTCTaGGACGTTAGGATTAAGGTAGTAAAATTCGGTAGG +
Preference number: 6 (lower is better)
Translates to: EKEMHQCVPIAV*DVRIKVVKFGR
Trigger: CCTACCGAATTTTACTACCTTAATCCTAACGTCCAAGACAGCAATGGGAACACATTGATGCATCTCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS CAA 72 bp GTTGCTGTCATATCATTGAGAATGTTTAAGGCCATGTaGGTACTGAAGCTGTGGAACTTCATGATGCTGTAC +
Preference number: 6 (lower is better)
Translates to: VAVISLRMFKAM*VLKLWNFMMLY
Trigger: GTACAGCATCATGAAGTTCCACAGCTTCAGTACCAACATGGCCTTAAACATTCTCAATGATATGACAGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS TCA 72 bp AGGGCTAGTTTCACCTGGTCAGTCACTATTAAGAAATaGTCCTTTGTTTTCTTCTCACTCAAGGTCAAATCC +
Preference number: 6 (lower is better)
Translates to: RASFTWSVTIKK*SFVFFSLKVKS
Trigger: GGATTTGACCTTGAGTGAGAAGAAAACAAAGGATCATTTCTTAATAGTGACTGACCAGGTGAAACTAGCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8
CDS GCA 72 bp ATCGTTCTTCTTAATCCGGTGTCTAACACCTTTGCCTaGTTTGTTCTTCAGGTTGAAGTTGATGTCAAACTT +
Preference number: 6 (lower is better)
Translates to: IVLLNPVSNTFA*FVLQVEVDVKL
Trigger: AAGTTTGACATCAACTTCAACCTGAAGAACAAAGCAGGCAAAGGTGTTAGACACCGGATTAAGAAGAACGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078626.8