RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRAM2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000041779

Ensembl transcript IDs: ENSMUST00000037998.6

Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAAGGGGGTCACAGACTCCTGTGGACATGGCTGTGTCAGCTCATaGAACCAGAAGAGTAACCCTGAGGCATCCTGGTGTCAGGCTCTG +
Preference number: 1 (lower is better)
Translates to: GKGVTDSCGHGCVSS*NQKSNPEASWCQAL
Trigger: CAGAGCCTGACACCAGGATGCCTCAGGGTTACTCTTCTGGTTGCATGAGCTGACACAGCCATGTCCACAGGAGTCTGTGACCCCCTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 90 bp AGGGATGATGACGACCTCTCCTGTGGGTCCCCTCTCTCCAGATATTaGAGGATGGATGCAGTAAGGGACAAGACCACCGGCTGGGAGGGT +
Preference number: 1 (lower is better)
Translates to: RDDDDLSCGSPLSRY*RMDAVRDKTTGWEG
Trigger: ACCCTCCCAGCCGGTGGTCTTGTCCCTTACTGCATCCATCCTGCAATATCTGGAGAGAGGGGACCCACAGGAGAGGTCGTCATCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 90 bp CTGTTTCTGCAGAGAGATGAAGTTGAGGTTGCAAGTTTGGCCGGCTaGGGCAGGCCATCTCTGGACTTGGGAACAGCGTGTCTTGGGCGG +
Preference number: 1 (lower is better)
Translates to: LFLQRDEVEVASLAG*GRPSLDLGTACLGR
Trigger: CCGCCCAAGACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAACTTGCAACCTCAACTTCATCTCTCTGCAGAAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 90 bp AAGGAACACATGGCGGGCGATGGAGTCCTTGGGGCTTCCTGTTTCTaGAGAGAGATGAAGTTGAGGTTGCAAGTTTGGCCGGCTGGGGCA +
Preference number: 1 (lower is better)
Translates to: KEHMAGDGVLGASCF*REMKLRLQVWPAGA
Trigger: TGCCCCAGCCGGCCAAACTTGCAACCTCAACTTCATCTCTCTGCAGAAACAGGAAGCCCCAAGGACTCCATCGCCCGCCATGTGTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 90 bp CTCCCAAGCCTGCTAACAGCCCAGAAGTCAAGGCTGGCGAGCTGCTaGCCTTGGTCTCAGGCTTTTCTGGAAATGAACACCCCAAACTCC +
Preference number: 1 (lower is better)
Translates to: LPSLLTAQKSRLASC*PWSQAFLEMNTPNS
Trigger: GGAGTTTGGGGTGTTCATTTCCAGAAAAGCCTGAGACCAAGGGCAGCAGCTCGCCAGCCTTGACTTCTGGGCTGTTAGCAGGCTTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 90 bp CGACCTCTCCTGTGGGTCCCCTCTCTCCAGATATTGCAGGATGGATaGAGTAAGGGACAAGACCACCGGCTGGGAGGGTTATTGCACAAC +
Preference number: 1 (lower is better)
Translates to: RPLLWVPSLQILQDG*SKGQDHRLGGLLHN
Trigger: GTTGTGCAATAACCCTCCCAGCCGGTGGTCTTGTCCCTTACTGCATCCATCCTGCAATATCTGGAGAGAGGGGACCCACAGGAGAGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 90 bp TCCAGATATTGCAGGATGGATGCAGTAAGGGACAAGACCACCGGCTaGGAGGGTTATTGCACAACCCGGAATGGCAGGCGGGAACAGGCA +
Preference number: 1 (lower is better)
Translates to: SRYCRMDAVRDKTTG*EGYCTTRNGRREQA
Trigger: TGCCTGTTCCCGCCTGCCATTCCGGGTTGTGCAATAACCCTCCCAGCCGGTGGTCTTGTCCCTTACTGCATCCATCCTGCAATATCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 90 bp TTGAGGTTGCAAGTTTGGCCGGCTGGGGCAGGCCATCTCTGGACTTaGGAACAGCGTGTCTTGGGCGGGTTTGTAACTGCCTTTTGGTTT +
Preference number: 1 (lower is better)
Translates to: LRLQVWPAGAGHLWT*EQRVLGGFVTAFWF
Trigger: AAACCAAAAGGCAGTTACAAACCCGCCCAAGACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAACTTGCAACCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 90 bp CGAGCAGTAGCGGGGCGGACAGGGCTCACCACTGTGGCTGATTCTTaGAAACATGGCCCATTGTTTGCACAGGAACAAGAAACCCTGGAA +
Preference number: 1 (lower is better)
Translates to: RAVAGRTGLTTVADS*KHGPLFAQEQETLE
Trigger: TTCCAGGGTTTCTTGTTCCTGTGCAAACAATGGGCCATGTTTCCAAGAATCAGCCACAGTGGTGAGCCCTGTCCGCCCCGCTACTGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 90 bp CTAAAGTTCACCCTTAGGCTAGCCACATGCTGCTGCTGCTGCCGCTaGTGTGAACCAGTTAGGGACACAGGGCTAGGACTGACCAGAATA +
Preference number: 1 (lower is better)
Translates to: LKFTLRLATCCCCCR*CEPVRDTGLGLTRI
Trigger: TATTCTGGTCAGTCCTAGCCCTGTGTCCCTAACTGGTTCACAGCAGCGGCAGCAGCAGCAGCATGTGGCTAGCCTAAGGGTGAACTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 90 bp AGGACTGACCAGAATAGCAGAAAGCCTCCTTCCCTGGCTTTAGCCTaGTTCTTCTTCCCCAGGACCACCTCTGACCATAGGAGGAAGACA +
Preference number: 1 (lower is better)
Translates to: RTDQNSRKPPSLALA*FFFPRTTSDHRRKT
Trigger: TGTCTTCCTCCTATGGTCAGAGGTGGTCCTGGGGAAGAAGAAGCAGGCTAAAGCCAGGGAAGGAGGCTTTCTGCTATTCTGGTCAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 90 bp GACCTTTTTCCCAACCCCCAAGCTTCCCTTATTAGACAGGAGGCATaGGTGTCTGCAGCTGGGTTACCTCACAAGCTTCCACAGCCAGAA +
Preference number: 1 (lower is better)
Translates to: DLFPNPQASLIRQEA*VSAAGLPHKLPQPE
Trigger: TTCTGGCTGTGGAAGCTTGTGAGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGGGTTGGGAAAAAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR TCA 90 bp TATGAAAGAAGAGAAAGACTAGAAGGTAGAGAGGAACTCCCCCTTTaGTGCCAAGGCTTCTGCTGGTGGAGACGAGCATGGGCAGGAGGG +
Preference number: 1 (lower is better)
Translates to: YERRERLEGREELPL*CQGFCWWRRAWAGG
Trigger: CCCTCCTGCCCATGCTCGTCTCCACCAGCAGAAGCCTTGGCATCAAAGGGGGAGTTCCTCTCTACCTTCTAGTCTTTCTCTTCTTTCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 90 bp ATACTGTCAACCCATGTCCCTTTCCCCTGGAGCTGTACTGAGGTATaGTGTCATTGGCTTTGTATGCCAGTCAGCCCTAGAGCCTTGGCA +
Preference number: 1 (lower is better)
Translates to: ILSTHVPFPWSCTEV*CHWLCMPVSPRALA
Trigger: TGCCAAGGCTCTAGGGCTGACTGGCATACAAAGCCAATGACAGCATACCTCAGTACAGCTCCAGGGGAAAGGGACATGGGTTGACAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 90 bp TGGACTTGGGAACAGCGTGTCTTGGGCGGGTTTGTAACTGCCTTTTaGTTTGGTTTCAGATGCTGGTGGGTGGAGAATGGTCCAGATCGA +
Preference number: 1 (lower is better)
Translates to: WTWEQRVLGGFVTAF*FGFRCWWVENGPDR
Trigger: TCGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGACACGCTGTTCCCAAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR TCA 90 bp CCTGGAATGCCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTaGTCTTATCCCCAGACACTGACAATGTCCCGGTCTGAGGATGCT +
Preference number: 1 (lower is better)
Translates to: PGMPLVMIVMSATPD*SYPQTLTMSRSEDA
Trigger: AGCATCCTCAGACCGGGACATTGTCAGTGTCTGGGGATAAGATCAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGGCATTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 90 bp CGTGTCTTGGGCGGGTTTGTAACTGCCTTTTGGTTTGGTTTCAGATaGTGGTGGGTGGAGAATGGTCCAGATCGACTCTTCTGTTTGTCG +
Preference number: 1 (lower is better)
Translates to: RVLGGFVTAFWFGFR*WWVENGPDRLFCLS
Trigger: CGACAAACAGAAGAGTCGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 90 bp TTGGGCGGGTTTGTAACTGCCTTTTGGTTTGGTTTCAGATGCTGGTaGGTGGAGAATGGTCCAGATCGACTCTTCTGTTTGTCGAGCCAC +
Preference number: 1 (lower is better)
Translates to: LGGFVTAFWFGFRCW*VENGPDRLFCLSSH
Trigger: GTGGCTCGACAAACAGAAGAGTCGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 90 bp GTCTTGGGCGGGTTTGTAACTGCCTTTTGGTTTGGTTTCAGATGCTaGTGGGTGGAGAATGGTCCAGATCGACTCTTCTGTTTGTCGAGC +
Preference number: 1 (lower is better)
Translates to: VLGGFVTAFWFGFRC*WVENGPDRLFCLSS
Trigger: GCTCGACAAACAGAAGAGTCGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 90 bp TTGGGAACAGCGTGTCTTGGGCGGGTTTGTAACTGCCTTTTGGTTTaGTTTCAGATGCTGGTGGGTGGAGAATGGTCCAGATCGACTCTT +
Preference number: 1 (lower is better)
Translates to: LGTACLGRVCNCLLV*FQMLVGGEWSRSTL
Trigger: AAGAGTCGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGACACGCTGTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 90 bp ACAAAGTCTTGGCTTTCCTATAACATCAATGCCAGAGAGGCTGGGTaGGTGAGAAAGCACCCCATAGTTCTCCCAAGCCTGCTAACAGCC +
Preference number: 1 (lower is better)
Translates to: TKSWLSYNINAREAG*VRKHPIVLPSLLTA
Trigger: GGCTGTTAGCAGGCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGATGTTATAGGAAAGCCAAGACTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR TCA 90 bp GACTCTTCTGTTTGTCGAGCCACCTTTCTAGAAGAGGCAGATGTTTaGTGTGCTTTGCTCTTGTGGGACAAGTGGGAAGGCACATCCTCC +
Preference number: 1 (lower is better)
Translates to: DSSVCRATFLEEADV*CALLLWDKWEGTSS
Trigger: GGAGGATGTGCCTTCCCACTTGTCCCACAAGAGCAAAGCACATCAAACATCTGCCTCTTCTAGAAAGGTGGCTCGACAAACAGAAGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 90 bp GTGGCTTGGAAGGGAGCTCTTGCTGAAGACCCAGCTCCCTCTTTATaGGTAAACACTCAAGCTCTGGTCTCAGATATGGTGTCAAAGGAA +
Preference number: 1 (lower is better)
Translates to: VAWKGALAEDPAPSL*VNTQALVSDMVSKE
Trigger: TTCCTTTGACACCATATCTGAGACCAGAGCTTGAGTGTTTACCCATAAAGAGGGAGCTGGGTCTTCAGCAAGAGCTCCCTTCCAAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 90 bp TTCTGTTTGTCGAGCCACCTTTCTAGAAGAGGCAGATGTTTGATGTaGTTTGCTCTTGTGGGACAAGTGGGAAGGCACATCCTCCTTAGC +
Preference number: 1 (lower is better)
Translates to: FCLSSHLSRRGRCLM*FALVGQVGRHILLS
Trigger: GCTAAGGAGGATGTGCCTTCCCACTTGTCCCACAAGAGCAAAGCACATCAAACATCTGCCTCTTCTAGAAAGGTGGCTCGACAAACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 90 bp ACACTGTCTTTCTGGATTAAGTCACTATGTCCCCAAAGCGAAGGATaGGTAGAACCAGAATCCTACATCTTGACTGTCTGTCGGTCAGCA +
Preference number: 1 (lower is better)
Translates to: TLSFWIKSLCPQSEG*VEPESYILTVCRSA
Trigger: TGCTGACCGACAGACAGTCAAGATGTAGGATTCTGGTTCTACGCATCCTTCGCTTTGGGGACATAGTGACTTAATCCAGAAAGACAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 90 bp ATTCTTGGAAACATGGCCCATTGTTTGCACAGGAACAAGAAACCCTaGAATGCCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTG +
Preference number: 1 (lower is better)
Translates to: ILGNMAHCLHRNKKP*NAFGDDSDVSDSRL
Trigger: CAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGGCATTCCAGGGTTTCTTGTTCCTGTGCAAACAATGGGCCATGTTTCCAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 90 bp AAGCTCACACACAAGAAGCCAAGGGGATCTCATCTCTATTCTGTATaGTCAACACATCCAGCATGTCTATGTGTAAGCTGGACACAGAGA +
Preference number: 1 (lower is better)
Translates to: KLTHKKPRGSHLYSV*STHPACLCVSWTQR
Trigger: TCTCTGTGTCCAGCTTACACATAGACATGCTGGATGTGTTGAGCATACAGAATAGAGATGAGATCCCCTTGGCTTCTTGTGTGTGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 90 bp CATGCAACCAGAAGAGTAACCCTGAGGCATCCTGGTGTCAGGCTCTaGGTGTGCTCAACAAACAACATTAACAACTTTAAAAGAACACTC +
Preference number: 1 (lower is better)
Translates to: HATRRVTLRHPGVRL*VCSTNNINNFKRTL
Trigger: GAGTGTTCTTTTAAAGTTGTTAATGTTGTTTGTTGAGCACACCCAGAGCCTGACACCAGGATGCCTCAGGGTTACTCTTCTGGTTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 90 bp TTCTGTAATTCTGGCAACAAGGTTTGTGCCAACTTCACAAAGTCTTaGCTTTCCTATAACATCAATGCCAGAGAGGCTGGGTGGGTGAGA +
Preference number: 1 (lower is better)
Translates to: FCNSGNKVCANFTKS*LSYNINAREAGWVR
Trigger: TCTCACCCACCCAGCCTCTCTGGCATTGATGTTATAGGAAAGCCAAGACTTTGTGAAGTTGGCACAAACCTTGTTGCCAGAATTACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR TCA 90 bp CTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACTGAAAAGTaGGGTTTAATCACACATGAATCTGTACCCCAAAGAATGCAGCAC +
Preference number: 1 (lower is better)
Translates to: LRSSFKCVLNRVTEK*GLITHESVPQRMQH
Trigger: GTGCTGCATTCTTTGGGGTACAGATTCATGTGTGATTAAACCTCACTTTTCAGTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 90 bp ACAAAAGTTTCACAGAGGCCACTCGGCGTGACTTTTCTTCTCATCTaGAAAGCTTTGAAAGCAGATGTAATGGAGCTAACACTTGTATTA +
Preference number: 1 (lower is better)
Translates to: TKVSQRPLGVTFLLI*KALKADVMELTLVL
Trigger: TAATACAAGTGTTAGCTCCATTACATCTGCTTTCAAAGCTTTGCAGATGAGAAGAAAAGTCACGCCGAGTGGCCTCTGTGAAACTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR TCA 90 bp TTTGGCCGGCTGGGGCAGGCCATCTCTGGACTTGGGAACAGCGTGTCTTGGGCGCAGATTGGCAAGCCCTaGGACCCAAGGGCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: FGRLGQAISGLGNSVSWAQIGKP*DPRAGL
Trigger: CAGCCCTGCCCTTGGGTCTCAGGGCTTGCCAATCTG...CGCCCAAGACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp CAGGGGGTTCTCGGTCCACCAGTCCTGCCACTGGCACCTACTGGAATTCCAGGGTCAGATGCTGGTGGGTaGAGAATGGTCCAGATCGAC +
Preference number: 2 (lower is better)
Translates to: QGVLGPPVLPLAPTGIPGSDAGG*RMVQID
Trigger: GTCGATCTGGACCATTCTCCACCCACCAGCATCTGA...CCCTGGAATTCCAGTAGGTGCCAGTGGCAGGACTGGTGGACCGAGAACCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 90 bp TGGCCGGCTGGGGCAGGCCATCTCTGGACTTGGGAACAGCGTGTCTaGGGCGGGTTTGTAACTGCCTTTTGGTTTGGTTTCAGATGCTGG +
Preference number: 2 (lower is better)
Translates to: WPAGAGHLWTWEQRV*GGFVTAFWFGFRCW
Trigger: CCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR GCA 90 bp GTCCACATTTGCATTGTGAGTTGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTAGGCTGGCGAGCTGCTaGCCTTGGTCTCAGGCTTTT +
Preference number: 2 (lower is better)
Translates to: VHICIVSCAGAPAPPLILRLASC*PWSQAF
Trigger: AAAAGCCTGAGACCAAGGGCAGCAGCTCGCCAGCCT...AAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp GTCCACATTTGCATTGTGAGTTGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTGGGCGATGGAGTCCTTaGGGCTTCCTGTTTCTGCAG +
Preference number: 2 (lower is better)
Translates to: VHICIVSCAGAPAPPLILGRWSP*GFLFLQ
Trigger: CTGCAGAAACAGGAAGCCCCAAGGACTCCATCGCCC...AAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp GTAAGGGATGATGACGACCTCTCCTGTGGGTCCCCTCTCTCCAGATATTGCAGGGTTCCTGCAGTGAGCTaGCAAGGGCCTGCCAGCAAC +
Preference number: 2 (lower is better)
Translates to: VRDDDDLSCGSPLSRYCRVPAVS*QGPASN
Trigger: GTTGCTGGCAGGCCCTTGCCAGCTCACTGCAGGAAC...CCTGCAATATCTGGAGAGAGGGGACCCACAGGAGAGGTCGTCATCATCCCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR TCA 90 bp CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTGAGGAACTCCCCCTTTaGTGCCAAGGCTTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: PQASLIRQEAWVSAAGLPEELPL*CQGFCW
Trigger: CCAGCAGAAGCCTTGGCATCAAAGGGGGAGTTCCTC...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR TCA 90 bp GCGGAGTATGGCAGGTCCTTCACTAAGGGTGTGGTACTTTGGGGACAGGAGAGCTGTCCCCTCAGAGAGTaGAGGCAGGCTGCTTTCCAA +
Preference number: 2 (lower is better)
Translates to: AEYGRSFTKGVVLWGQESCPLRE*RQAAFQ
Trigger: TTGGAAAGCAGCCTGCCTTCACTCTCTGAGGGGACA...GCTCTCCTGTCCCCAAAGTACCACACCCTTAGTGAAGGACCTGCCATACTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR TCA 90 bp GCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACACTGATGGGGTAAGGTaGGCTTGGGAGCCACCGGCT +
Preference number: 2 (lower is better)
Translates to: AGAPAPPLILQVCVKQSNTDGVR*AWEPPA
Trigger: AGCCGGTGGCTCCCAAGCTCACCTTACCCCATCAGT...GTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR GCA 90 bp GCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACGCCACATGCTGCTGCTaGTGCCGCTGCTGTGAACCA +
Preference number: 2 (lower is better)
Translates to: AGAPAPPLILQVCVKQSNATCCC*CRCCEP
Trigger: TGGTTCACAGCAGCGGCAGCAGCAGCAGCATGTGGC...GTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp ATCAATGCCAGAGAGGCTGGGTGGGTGAGAAAGCACCCCATAGTTCTCCCAAGCCAAGGCTTCTGCTGGTaGAGACGAGCATGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: INAREAGWVRKHPIVLPSQGFCW*RRAWAG
Trigger: TCCTGCCCATGCTCGTCTCCACCAGCAGAAGCCTTG...GCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp GTAAGGGATGATGACGACCTCTCCTGTGGGTCCCCTCTCTCCAGATATTGCAGGCTAGGGGAGGCTCCTTaGCCAGAGGCTTCCAGATTG +
Preference number: 2 (lower is better)
Translates to: VRDDDDLSCGSPLSRYCRLGEAP*PEASRL
Trigger: CAATCTGGAAGCCTCTGGCCAAGGAGCCTCCCCTAG...CCTGCAATATCTGGAGAGAGGGGACCCACAGGAGAGGTCGTCATCATCCCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTAACCCTGAGGCATCCTaGTGTCAGGCTCTGGGTGTG +
Preference number: 2 (lower is better)
Translates to: PQASLIRQEAWVSAAGLPNPEAS*CQALGV
Trigger: CACACCCAGAGCCTGACACCAGGATGCCTCAGGGTT...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp GGTGGAAGAGCAGCTCACTGTTCTGACTCACTGCCTGTCGGTCCATGCCGCACCCTCTGGTCTCAGATATaGTGTCAAAGGAAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: GGRAAHCSDSLPVGPCRTLWSQI*CQRKAR
Trigger: CCTGGCCTTCCTTTGACACCATATCTGAGACCAGAG...GGTGCGGCATGGACCGACAGGCAGTGAGTCAGAACAGTGAGCTGCTCTTCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp ATCAATGCCAGAGAGGCTGGGTGGGTGAGAAAGCACCCCATAGTTCTCCCAAGCGAGGGACAGGACCCCTaGATCCAAGACAGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: INAREAGWVRKHPIVLPSEGQDP*IQDSCS
Trigger: AGAGCAGCTGTCTTGGATCCAGGGGTCCTGTCCCTC...GCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR TCA 90 bp GCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACAAGATAGGACAGAGGTaGGGCCATCTGGCGGCTCAG +
Preference number: 2 (lower is better)
Translates to: AGAPAPPLILQVCVKQSNKIGQR*GHLAAQ
Trigger: CTGAGCCGCCAGATGGCCTCACCTCTGTCCTATCTT...GTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR TCA 90 bp CAGGGGGTTCTCGGTCCACCAGTCCTGCCACTGGCACCTACTGGAATTCCAGGGGCTTTCCAATTCAAATaGCACACTGGAAGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: QGVLGPPVLPLAPTGIPGAFQFK*HTGSSL
Trigger: CAGAGAGCTTCCAGTGTGTCATTTGAATTGGAAAGC...CCCTGGAATTCCAGTAGGTGCCAGTGGCAGGACTGGTGGACCGAGAACCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR TCA 90 bp GTCCACATTTGCATTGTGAGTTGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTGTGGGCTACACTGGCTaGAAGGTGCCAGATCAATTC +
Preference number: 2 (lower is better)
Translates to: VHICIVSCAGAPAPPLILVGYTG*KVPDQF
Trigger: GAATTGATCTGGCACCTTTCAGCCAGTGTAGCCCAC...AAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR GCA 90 bp CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTTCCCTGGCTTTAGCCTaGTTCTTCTTCCCCAGGACC +
Preference number: 2 (lower is better)
Translates to: PQASLIRQEAWVSAAGLPSLALA*FFFPRT
Trigger: GGTCCTGGGGAAGAAGAAGCAGGCTAAAGCCAGGGA...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR TCA 90 bp GTCCACATTTGCATTGTGAGTTGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTAGGAAGAAAGGAGGATaGGAAGCAGCCATGAGAGAG +
Preference number: 2 (lower is better)
Translates to: VHICIVSCAGAPAPPLILRKKGG*EAAMRE
Trigger: CTCTCTCATGGCTGCTTCTCATCCTCCTTTCTTCCT...AAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR TCA 90 bp CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTACGAAGTTCCTGCAGTaGGCTGGCAAGGGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: LTLVLKGRERARSRCQHPTKFLQ*AGKGLP
Trigger: TGGCAGGCCCTTGCCAGCTCACTGCAGGAACTTCGT...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR TCA 90 bp GTAAGGGATGATGACGACCTCTCCTGTGGGTCCCCTCTCTCCAGATATTGCAGGAGAGGCCACTCGGCGTaGCTTTTCTTCTCATCTGCA +
Preference number: 2 (lower is better)
Translates to: VRDDDDLSCGSPLSRYCRRGHSA*LFFSSA
Trigger: TGCAGATGAGAAGAAAAGTCACGCCGAGTGGCCTCT...CCTGCAATATCTGGAGAGAGGGGACCCACAGGAGAGGTCGTCATCATCCCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTGTGGAGAGACTGAGCTaGGGCCAGGGCTTCCTCATC +
Preference number: 2 (lower is better)
Translates to: LTLVLKGRERARSRCQHPVERLS*GQGFLI
Trigger: GATGAGGAAGCCCTGGCCCCAGCTCAGTCTCTCCAC...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp ATCAATGCCAGAGAGGCTGGGTGGGTGAGAAAGCACCCCATAGTTCTCCCAAGCGCCAGATCAATTCTTTaGGGATGCCCAGAGAAGGGC +
Preference number: 2 (lower is better)
Translates to: INAREAGWVRKHPIVLPSARSIL*GCPEKG
Trigger: GCCCTTCTCTGGGCATCCCCAAAGAATTGATCTGGC...GCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTCATGTCCCTTTCCCCTaGAGCTGTACTGAGGTATGC +
Preference number: 2 (lower is better)
Translates to: PQASLIRQEAWVSAAGLPHVPFP*SCTEVC
Trigger: GCATACCTCAGTACAGCTCCAGGGGAAAGGGACATG...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 90 bp CTGGACTTGGGAACAGCGTGTCTTGGGCGGGTTTGTAACTGCCTTTaGGTTTGGTTTCAGATGCTGGTGGGTGGAGAATGGTCCAGATCG +
Preference number: 2 (lower is better)
Translates to: LDLGTACLGRVCNCL*VWFQMLVGGEWSRS
Trigger: CGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGACACGCTGTTCCCAAGTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR TCA 90 bp GCGGAGTATGGCAGGTCCTTCACTAAGGGTGTGGTACTTTGGGGACAGGAGAGCGAAGAGGCAGATGTTTaGTGTGCTTTGCTCTTGTGG +
Preference number: 2 (lower is better)
Translates to: AEYGRSFTKGVVLWGQESEEADV*CALLLW
Trigger: CCACAAGAGCAAAGCACATCAAACATCTGCCTCTTC...GCTCTCCTGTCCCCAAAGTACCACACCCTTAGTGAAGGACCTGCCATACTCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR TCA 90 bp GTCCACATTTGCATTGTGAGTTGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTAAAGACAAATGCAAATaGAGGCCTTCCCTCGCTGCA +
Preference number: 2 (lower is better)
Translates to: VHICIVSCAGAPAPPLILKDKCK*RPSLAA
Trigger: TGCAGCGAGGGAAGGCCTTCATTTGCATTTGTCTTT...AAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR GCA 90 bp CATGCAACCAGAAGAGTAACCCTGAGGCATCCTGGTGTCAGGCTCTGGGTGTGCTGGTTTGGTTTCAGATaGTGGTGGGTGGAGAATGGT +
Preference number: 2 (lower is better)
Translates to: HATRRVTLRHPGVRLWVCWFGFR*WWVENG
Trigger: ACCATTCTCCACCCACCAGCATCTGAAACCAAACCA...GCACACCCAGAGCCTGACACCAGGATGCCTCAGGGTTACTCTTCTGGTTGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR GCA 90 bp GTAAGGGATGATGACGACCTCTCCTGTGGGTCCCCTCTCTCCAGATATTGCAGGGTCATTGGCTTTGTATaGCAGTCAGCCCTAGAGCCT +
Preference number: 2 (lower is better)
Translates to: VRDDDDLSCGSPLSRYCRVIGFV*QSALEP
Trigger: AGGCTCTAGGGCTGACTGGCATACAAAGCCAATGAC...CCTGCAATATCTGGAGAGAGGGGACCCACAGGAGAGGTCGTCATCATCCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp GAGAGTGAAGGCAGGCTGCTTTCCAATTCAAATGACACACTGGAAGCTCTCTGGTGCCAAGGCTTCTGCTaGTGGAGACGAGCATGGGCA +
Preference number: 2 (lower is better)
Translates to: ESEGRLLSNSNDTLEALWCQGFC*WRRAWA
Trigger: TGCCCATGCTCGTCTCCACCAGCAGAAGCCTTGGCA...CCAGAGAGCTTCCAGTGTGTCATTTGAATTGGAAAGCAGCCTGCCTTCACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR GCA 90 bp CATGCAACCAGAAGAGTAACCCTGAGGCATCCTGGTGTCAGGCTCTGGGTGTGCAGACAATCAGGAGAATaGAGGCCTCTGAGAAAACTC +
Preference number: 2 (lower is better)
Translates to: HATRRVTLRHPGVRLWVCRQSGE*RPLRKL
Trigger: GAGTTTTCTCAGAGGCCTGCATTCTCCTGATTGTCT...GCACACCCAGAGCCTGACACCAGGATGCCTCAGGGTTACTCTTCTGGTTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR GCA 90 bp CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTACATGCTGCTGCTGCTaGCGCTGCTGTGAACCAGTT +
Preference number: 2 (lower is better)
Translates to: LTLVLKGRERARSRCQHPTCCCC*RCCEPV
Trigger: AACTGGTTCACAGCAGCGGCAGCAGCAGCAGCATGT...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp TGCTCTTTATACCCCTGTTCCTCCAAGACCTTCACATGTCTCATGCTTGTCACATGGTGGAGACGAGCATaGGCAGGAGGGTGGAGAGAC +
Preference number: 2 (lower is better)
Translates to: CSLYPCSSKTFTCLMLVTWWRRA*AGGWRD
Trigger: GTCTCTCCACCCTCCTGCCCATGCTCGTCTCCACCA...TGTGACAAGCATGAGACATGTGAAGGTCTTGGAGGAACAGGGGTATAAAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR GCA 90 bp ATCAATGCCAGAGAGGCTGGGTGGGTGAGAAAGCACCCCATAGTTCTCCCAAGCGGCAGATGTTTGATGTaGTTTGCTCTTGTGGGACAA +
Preference number: 2 (lower is better)
Translates to: INAREAGWVRKHPIVLPSGRCLM*FALVGQ
Trigger: TTGTCCCACAAGAGCAAAGCACATCAAACATCTGCC...GCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTAACTGCCTTTTGGTTTaGTTTCAGATGCTGGTGGGT +
Preference number: 2 (lower is better)
Translates to: PQASLIRQEAWVSAAGLPNCLLV*FQMLVG
Trigger: ACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTT...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp ATCAATGCCAGAGAGGCTGGGTGGGTGAGAAAGCACCCCATAGTTCTCCCAAGCTGCCACGTTGGTGTTTaGAACCAAATTCCTCAGTTG +
Preference number: 2 (lower is better)
Translates to: INAREAGWVRKHPIVLPSCHVGV*NQIPQL
Trigger: CAACTGAGGAATTTGGTTCCAAACACCAACGTGGCA...GCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp GGTGGAAGAGCAGCTCACTGTTCTGACTCACTGCCTGTCGGTCCATGCCGCACCTGTCTATGTGTAAGCTaGACACAGAGAAAAAGAATG +
Preference number: 2 (lower is better)
Translates to: GGRAAHCSDSLPVGPCRTCLCVS*TQRKRM
Trigger: CATTCTTTTTCTCTGTGTCCAGCTTACACATAGACA...GGTGCGGCATGGACCGACAGGCAGTGAGTCAGAACAGTGAGCTGCTCTTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTAAGGGTGTGGTACTTTaGGGACAGGAGAGCCTGCAT +
Preference number: 2 (lower is better)
Translates to: LTLVLKGRERARSRCQHPKGVVL*GQESLH
Trigger: ATGCAGGCTCTCCTGTCCCCAAAGTACCACACCCTT...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp GGTGGAAGAGCAGCTCACTGTTCTGACTCACTGCCTGTCGGTCCATGCCGCACCTTCTTTGAGGATGTGTaGAATCTAAGTGAGCTTTGT +
Preference number: 2 (lower is better)
Translates to: GGRAAHCSDSLPVGPCRTFFEDV*NLSELC
Trigger: ACAAAGCTCACTTAGATTCCACACATCCTCAAAGAA...GGTGCGGCATGGACCGACAGGCAGTGAGTCAGAACAGTGAGCTGCTCTTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 90 bp CGACTCTTCTGTTTGTCGAGCCACCTTTCTAGAAGAGGCAGATGTTaGATGTGCTTTGCTCTTGTGGGACAAGTGGGAAGGCACATCCTC +
Preference number: 2 (lower is better)
Translates to: RLFCLSSHLSRRGRC*MCFALVGQVGRHIL
Trigger: GAGGATGTGCCTTCCCACTTGTCCCACAAGAGCAAAGCACATCAAACATCTGCCTCTTCTAGAAAGGTGGCTCGACAAACAGAAGAGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR TCA 90 bp AATGCCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTGATCTTATCCCCAAACCTGGGGTGGGAATaGGGAAACTGGAAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: NAFGDDSDVSDSRLILSPNLGWE*GNWKSR
Trigger: CCTGCTCTTCCAGTTTCCTCATTCCCACCCCAGGTT...TGGGGATAAGATCAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR GCA 90 bp CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTTCAATTCTTTGGGGATaGCCAGAGAAGGGCCAGGAA +
Preference number: 2 (lower is better)
Translates to: LTLVLKGRERARSRCQHPSILWG*PEKGQE
Trigger: TTCCTGGCCCTTCTCTGGGCATCCCCAAAGAATTGA...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTGGTTTCAGATGCTGGTaGGTGGAGAATGGTCCAGAT +
Preference number: 2 (lower is better)
Translates to: LTLVLKGRERARSRCQHPGFRCW*VENGPD
Trigger: ATCTGGACCATTCTCCACCCACCAGCATCTGAAACC...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp AATGCCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTGATCTTATCCCCACACCAGTCCTGCCACTaGCACCTACTGGAATTCCAG +
Preference number: 2 (lower is better)
Translates to: NAFGDDSDVSDSRLILSPHQSCH*HLLEFQ
Trigger: CTGGAATTCCAGTAGGTGCCAGTGGCAGGACTGGTG...TGGGGATAAGATCAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp AATGCCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTGATCTTATCCCCAGACAAGACCACCGGCTaGGAGGGTTATTGCACAACC +
Preference number: 2 (lower is better)
Translates to: NAFGDDSDVSDSRLILSPDKTTG*EGYCTT
Trigger: GGTTGTGCAATAACCCTCCCAGCCGGTGGTCTTGTC...TGGGGATAAGATCAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 90 bp GCTAATGTAGAAAAACAGTCAAAGTGTCCACATTTGCATTGTGAGTaGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: ANVEKQSKCPHLHCE*RRGTSSSAHPSSVC
Trigger: ACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGACACTTTGACTGTTTTTCTACATTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp ATCAATGCCAGAGAGGCTGGGTGGGTGAGAAAGCACCCCATAGTTCTCCCAAGCTTTGTAACTGCCTTTTaGTTTGGTTTCAGATGCTGG +
Preference number: 2 (lower is better)
Translates to: INAREAGWVRKHPIVLPSFVTAF*FGFRCW
Trigger: CCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAA...GCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp GCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACACTGTGGCTGATTCTTaGAAACATGGCCCATTGTTT +
Preference number: 2 (lower is better)
Translates to: AGAPAPPLILQVCVKQSNTVADS*KHGPLF
Trigger: AAACAATGGGCCATGTTTCCAAGAATCAGCCACAGT...GTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 90 bp TTCAGATGCTGGTGGGTGGAGAATGGTCCAGATCGACTCTTCTGTTaGTCGAGCCACCTTTCTAGAAGAGGCAGATGTTTGATGTGCTTT +
Preference number: 2 (lower is better)
Translates to: FRCWWVENGPDRLFC*SSHLSRRGRCLMCF
Trigger: AAAGCACATCAAACATCTGCCTCTTCTAGAAAGGTGGCTCGACAAACAGAAGAGTCGATCTGGACCATTCTCCACCCACCAGCATCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 90 bp AAACAACGTAAAGATCTCGAAGACGTCACAACACATTCTGTAAGATaGCCACAGAAACCCACGCAGGGCCGTGCGAATGACAGCAATAGG +
Preference number: 2 (lower is better)
Translates to: KQRKDLEDVTTHSVR*PQKPTQGRANDSNR
Trigger: CCTATTGCTGTCATTCGCACGGCCCTGCGTGGGTTTCTGTGGCAATCTTACAGAATGTGTTGTGACGTCTTCGAGATCTTTACGTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR GCA 90 bp CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTATGTTTGATGTGCTTTaGTCTTGTGGGACAAGTGGG +
Preference number: 2 (lower is better)
Translates to: LTLVLKGRERARSRCQHPMFDVL*SCGTSG
Trigger: CCCACTTGTCCCACAAGAGCAAAGCACATCAAACAT...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTTTAACACTGTCTTTCTaGATTAAGTCACTATGTCCC +
Preference number: 2 (lower is better)
Translates to: PQASLIRQEAWVSAAGLPLTLSF*IKSLCP
Trigger: GGGACATAGTGACTTAATCCAGAAAGACAGTGTTAA...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR GCA 90 bp CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTTGGCAACAAGGTTTGTaGCAACTTCACAAAGTCTTG +
Preference number: 2 (lower is better)
Translates to: LTLVLKGRERARSRCQHPWQQGL*QLHKVL
Trigger: CAAGACTTTGTGAAGTTGGCACAAACCTTGTTGCCA...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CCA 90 bp GTGGAACTTAGTTTCTGTAATTCTGGCAACAAGGTTTGTGCCAACTTCACAAAGGCGAGCTGCTGCCCTTaGTCTCAGGCTTTTCTGGAA +
Preference number: 2 (lower is better)
Translates to: VELSFCNSGNKVCANFTKASCCP*SQAFLE
Trigger: TTCCAGAAAAGCCTGAGACCAAGGGCAGCAGCTCGC...CTTTGTGAAGTTGGCACAAACCTTGTTGCCAGAATTACAGAAACTAAGTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR GCA 90 bp CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTCATCTCTATTCTGTATaGTCAACACATCCAGCATGT +
Preference number: 2 (lower is better)
Translates to: LTLVLKGRERARSRCQHPHLYSV*STHPAC
Trigger: ACATGCTGGATGTGTTGAGCATACAGAATAGAGATG...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR GCA 90 bp GTGGAACTTAGTTTCTGTAATTCTGGCAACAAGGTTTGTGCCAACTTCACAAAGGGGCGGGTTTGTAACTaGCTTTTGGTTTGGTTTCAG +
Preference number: 2 (lower is better)
Translates to: VELSFCNSGNKVCANFTKGRVCN*LLVWFQ
Trigger: CTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCC...CTTTGTGAAGTTGGCACAAACCTTGTTGCCAGAATTACAGAAACTAAGTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 90 bp CATCTGGCGGCTCAGGGGAGCAAGAGTATAAGATTTTTGGCTTTATaGAGAATGGTTTATGAAAGAAGAGAAAGACTAGAAGGTAGAGAG +
Preference number: 2 (lower is better)
Translates to: HLAAQGSKSIRFLAL*RMVYERRERLEGRE
Trigger: CTCTCTACCTTCTAGTCTTTCTCTTCTTTCATAAACCATTCTCAATAAAGCCAAAAATCTTATACTCTTGCTCCCCTGAGCCGCCAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR TCA 72 bp GGACGCCGAGGGAGGTGGAAGAGCAGCTCACTGTTCTaGCTCACTGCCTGTCGGTCCATGCCGCACCAGAAC +
Preference number: 3 (lower is better)
Translates to: GRRGRWKSSSLF*LTACRSMPHQN
Trigger: GTTCTGGTGCGGCATGGACCGACAGGCAGTGAGTCAGAACAGTGAGCTGCTCTTCCACCTCCCTCGGCGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 72 bp GCAGTAAGGGACAAGACCACCGGCTGGGAGGGTTATTaGACAACCCGGAATGGCAGGCGGGAACAGGCAGGC +
Preference number: 3 (lower is better)
Translates to: AVRDKTTGWEGY*TTRNGRREQAG
Trigger: GCCTGCCTGTTCCCGCCTGCCATTCCGGGTTGTGCAATAACCCTCCCAGCCGGTGGTCTTGTCCCTTACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CAA 90 bp GGTGGCCAAAGGAACACATGGCGGGCGATGGAGTCCTTGGGGCTTCCTGTTTCTGTTGAGGTTGCAAGTTaGGCCGGCTGGGGCAGGCCA +
Preference number: 3 (lower is better)
Translates to: GGQRNTWRAMESLGLPVSVEVAS*AGWGRP
Trigger: TGGCCTGCCCCAGCCGGCCAAACTTGCAACCTCAAC...AGAAACAGGAAGCCCCAAGGACTCCATCGCCCGCCATGTGTTCCTTTGGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp CAAGTTTGGCCGGCTGGGGCAGGCCATCTCTGGACTTaGGAACAGCGTGTCTTGGGCGGGTTTGTAACTGCC +
Preference number: 3 (lower is better)
Translates to: QVWPAGAGHLWT*EQRVLGGFVTA
Trigger: GGCAGTTACAAACCCGCCCAAGACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 72 bp ACCCTTAGGCTAGCCACATGCTGCTGCTGCTGCCGCTaGTGTGAACCAGTTAGGGACACAGGGCTAGGACTG +
Preference number: 3 (lower is better)
Translates to: TLRLATCCCCCR*CEPVRDTGLGL
Trigger: CAGTCCTAGCCCTGTGTCCCTAACTGGTTCACAGCAGCGGCAGCAGCAGCAGCATGTGGCTAGCCTAAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR TCA 72 bp AAGCCTGGCATTGATGTTCTCCCTAGCATCCTGTTCTaGGGGAAGAGGCTGCACTCAGGACGCCGAGGGAGG +
Preference number: 3 (lower is better)
Translates to: KPGIDVLPSILF*GKRLHSGRRGR
Trigger: CCTCCCTCGGCGTCCTGAGTGCAGCCTCTTCCCTCAGAACAGGATGCTAGGGAGAACATCAATGCCAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 72 bp ATGTTCTCCCTAGCATCCTGTTCTGAGGGAAGAGGCTaGACTCAGGACGCCGAGGGAGGTGGAAGAGCAGCT +
Preference number: 3 (lower is better)
Translates to: MFSLASCSEGRG*TQDAEGGGRAA
Trigger: AGCTGCTCTTCCACCTCCCTCGGCGTCCTGAGTGCAGCCTCTTCCCTCAGAACAGGATGCTAGGGAGAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 72 bp CTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTaGCAGCATCCTCCTCACGCTCACCACGGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: LVLKGRERARSR*QHPPHAHHGLE
Trigger: CTCCAGCCCGTGGTGAGCGTGAGGAGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 72 bp GACGACCTCTCCTGTGGGTCCCCTCTCTCCAGATATTaGAGGATGGATGCAGTAAGGGACAAGACCACCGGC +
Preference number: 3 (lower is better)
Translates to: DDLSCGSPLSRY*RMDAVRDKTTG
Trigger: GCCGGTGGTCTTGTCCCTTACTGCATCCATCCTGCAATATCTGGAGAGAGGGGACCCACAGGAGAGGTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CAA 90 bp CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTTCTAGGGGAGGCTCCTaGGCCAGAGGCTTCCAGATT +
Preference number: 3 (lower is better)
Translates to: PQASLIRQEAWVSAAGLPSRGGS*ARGFQI
Trigger: AATCTGGAAGCCTCTGGCCAAGGAGCCTCCCCTAGA...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CAA 90 bp ATCAATGCCAGAGAGGCTGGGTGGGTGAGAAAGCACCCCATAGTTCTCCCAAGCCTTGGAAGGGAGCTCTaGCTGAAGACCCAGCTCCCT +
Preference number: 3 (lower is better)
Translates to: INAREAGWVRKHPIVLPSLGREL*LKTQLP
Trigger: AGGGAGCTGGGTCTTCAGCAAGAGCTCCCTTCCAAG...GCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR TCA 72 bp CCCAAGCCTGAGGAGCTTGTAGAAGTAACTGTCCCCTaGGTCACCACACCTCTGGGGAGGGCAACTAGCAAC +
Preference number: 3 (lower is better)
Translates to: PKPEELVEVTVP*VTTPLGRATSN
Trigger: GTTGCTAGTTGCCCTCCCCAGAGGTGTGGTGACTCAGGGGACAGTTACTTCTACAAGCTCCTCAGGCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 72 bp AAGTTCACCCTTAGGCTAGCCACATGCTGCTGCTGCTaGCGCTGCTGTGAACCAGTTAGGGACACAGGGCTA +
Preference number: 3 (lower is better)
Translates to: KFTLRLATCCCC*RCCEPVRDTGL
Trigger: TAGCCCTGTGTCCCTAACTGGTTCACAGCAGCGGCAGCAGCAGCAGCATGTGGCTAGCCTAAGGGTGAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 72 bp CTAAAGTTCACCCTTAGGCTAGCCACATGCTGCTGCTaGTGCCGCTGCTGTGAACCAGTTAGGGACACAGGG +
Preference number: 3 (lower is better)
Translates to: LKFTLRLATCCC*CRCCEPVRDTG
Trigger: CCCTGTGTCCCTAACTGGTTCACAGCAGCGGCAGCAGCAGCAGCATGTGGCTAGCCTAAGGGTGAACTTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 72 bp GCAGCTCACTGTTCTGACTCACTGCCTGTCGGTCCATaGCGCACCAGAACAGAGCCAGAGAGAAGAATGTGC +
Preference number: 3 (lower is better)
Translates to: AAHCSDSLPVGP*RTRTEPERRMC
Trigger: GCACATTCTTCTCTCTGGCTCTGTTCTGGTGCGGCATGGACCGACAGGCAGTGAGTCAGAACAGTGAGCTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp CAGAGAGATGAAGTTGAGGTTGCAAGTTTGGCCGGCTaGGGCAGGCCATCTCTGGACTTGGGAACAGCGTGT +
Preference number: 3 (lower is better)
Translates to: QRDEVEVASLAG*GRPSLDLGTAC
Trigger: ACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAACTTGCAACCTCAACTTCATCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp AGAGGGAAGGTGGCCAAAGGAACACATGGCGGGCGATaGAGTCCTTGGGGCTTCCTGTTTCTGCAGAGAGAT +
Preference number: 3 (lower is better)
Translates to: RGKVAKGTHGGR*SPWGFLFLQRD
Trigger: ATCTCTCTGCAGAAACAGGAAGCCCCAAGGACTCCATCGCCCGCCATGTGTTCCTTTGGCCACCTTCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 72 bp CCTCCAGAGGGACAGGACCCCTGGATCCAAGACAGCTaGTCTTTATACCCCTGTTCCTCCAAGACCTTCACA +
Preference number: 3 (lower is better)
Translates to: PPEGQDPWIQDS*SLYPCSSKTFT
Trigger: TGTGAAGGTCTTGGAGGAACAGGGGTATAAAGAGCAGCTGTCTTGGATCCAGGGGTCCTGTCCCTCTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 72 bp AGCCTGCTAACAGCCCAGAAGTCAAGGCTGGCGAGCTaGTGCCCTTGGTCTCAGGCTTTTCTGGAAATGAAC +
Preference number: 3 (lower is better)
Translates to: SLLTAQKSRLAS*CPWSQAFLEMN
Trigger: GTTCATTTCCAGAAAAGCCTGAGACCAAGGGCAGCAGCTCGCCAGCCTTGACTTCTGGGCTGTTAGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp GTGGCCAAAGGAACACATGGCGGGCGATGGAGTCCTTaGGGCTTCCTGTTTCTGCAGAGAGATGAAGTTGAG +
Preference number: 3 (lower is better)
Translates to: VAKGTHGGRWSP*GFLFLQRDEVE
Trigger: CTCAACTTCATCTCTCTGCAGAAACAGGAAGCCCCAAGGACTCCATCGCCCGCCATGTGTTCCTTTGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp ACAGCCCAGAAGTCAAGGCTGGCGAGCTGCTGCCCTTaGTCTCAGGCTTTTCTGGAAATGAACACCCCAAAC +
Preference number: 3 (lower is better)
Translates to: TAQKSRLASCCP*SQAFLEMNTPN
Trigger: GTTTGGGGTGTTCATTTCCAGAAAAGCCTGAGACCAAGGGCAGCAGCTCGCCAGCCTTGACTTCTGGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp CCCAACCCCCAAGCTTCCCTTATTAGACAGGAGGCATaGGTGTCTGCAGCTGGGTTACCTCACAAGCTTCCA +
Preference number: 3 (lower is better)
Translates to: PNPQASLIRQEA*VSAAGLPHKLP
Trigger: TGGAAGCTTGTGAGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGGGTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp GCGGGGCGGACAGGGCTCACCACTGTGGCTGATTCTTaGAAACATGGCCCATTGTTTGCACAGGAACAAGAA +
Preference number: 3 (lower is better)
Translates to: AGRTGLTTVADS*KHGPLFAQEQE
Trigger: TTCTTGTTCCTGTGCAAACAATGGGCCATGTTTCCAAGAATCAGCCACAGTGGTGAGCCCTGTCCGCCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CAA 90 bp GCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACGGAATTCCAGGGATGTaGAGAGACAGGCAGTGGCTG +
Preference number: 3 (lower is better)
Translates to: AGAPAPPLILQVCVKQSNGIPGM*RDRQWL
Trigger: CAGCCACTGCCTGTCTCTCAACATCCCTGGAATTCC...GTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR TCA 72 bp TGCAGGCCTCTGAGAAAACTCAAGATAGGACAGAGGTaGGGCCATCTGGCGGCTCAGGGGAGCAAGAGTATA +
Preference number: 3 (lower is better)
Translates to: CRPLRKLKIGQR*GHLAAQGSKSI
Trigger: TATACTCTTGCTCCCCTGAGCCGCCAGATGGCCTCACCTCTGTCCTATCTTGAGTTTTCTCAGAGGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 72 bp GTCACAGACTCCTGTGGACATGGCTGTGTCAGCTCATaGAACCAGAAGAGTAACCCTGAGGCATCCTGGTGT +
Preference number: 3 (lower is better)
Translates to: VTDSCGHGCVSS*NQKSNPEASWC
Trigger: ACACCAGGATGCCTCAGGGTTACTCTTCTGGTTGCATGAGCTGACACAGCCATGTCCACAGGAGTCTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 72 bp CAGAATAGCAGAAAGCCTCCTTCCCTGGCTTTAGCCTaGTTCTTCTTCCCCAGGACCACCTCTGACCATAGG +
Preference number: 3 (lower is better)
Translates to: QNSRKPPSLALA*FFFPRTTSDHR
Trigger: CCTATGGTCAGAGGTGGTCCTGGGGAAGAAGAAGCAGGCTAAAGCCAGGGAAGGAGGCTTTCTGCTATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp TGTTTCTGCAGAGAGATGAAGTTGAGGTTGCAAGTTTaGCCGGCTGGGGCAGGCCATCTCTGGACTTGGGAA +
Preference number: 3 (lower is better)
Translates to: CFCREMKLRLQV*PAGAGHLWTWE
Trigger: TTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAACTTGCAACCTCAACTTCATCTCTCTGCAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp AAAGAACACCGAAGGGAAGGGGGTCACAGACTCCTGTaGACATGGCTGTGTCAGCTCATGCAACCAGAAGAG +
Preference number: 3 (lower is better)
Translates to: KEHRREGGHRLL*TWLCQLMQPEE
Trigger: CTCTTCTGGTTGCATGAGCTGACACAGCCATGTCCACAGGAGTCTGTGACCCCCTTCCCTTCGGTGTTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp CCTTTCCCCTGGAGCTGTACTGAGGTATGCTGTCATTaGCTTTGTATGCCAGTCAGCCCTAGAGCCTTGGCA +
Preference number: 3 (lower is better)
Translates to: PFPWSCTEVCCH*LCMPVSPRALA
Trigger: TGCCAAGGCTCTAGGGCTGACTGGCATACAAAGCCAATGACAGCATACCTCAGTACAGCTCCAGGGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR TCA 72 bp AGAGAAAGACTAGAAGGTAGAGAGGAACTCCCCCTTTaGTGCCAAGGCTTCTGCTGGTGGAGACGAGCATGG +
Preference number: 3 (lower is better)
Translates to: RERLEGREELPL*CQGFCWWRRAW
Trigger: CCATGCTCGTCTCCACCAGCAGAAGCCTTGGCATCAAAGGGGGAGTTCCTCTCTACCTTCTAGTCTTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 72 bp GACTTGGGAACAGCGTGTCTTGGGCGGGTTTGTAACTaGCTTTTGGTTTGGTTTCAGATGCTGGTGGGTGGA +
Preference number: 3 (lower is better)
Translates to: DLGTACLGRVCN*LLVWFQMLVGG
Trigger: TCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGACACGCTGTTCCCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 72 bp CCATGCCGCACCAGAACAGAGCCAGAGAGAAGAATGTaGTGTAGACACAGAGGCCCTCAAGCAGAGAAAGTT +
Preference number: 3 (lower is better)
Translates to: PCRTRTEPERRM*CRHRGPQAEKV
Trigger: AACTTTCTCTGCTTGAGGGCCTCTGTGTCTACAGCACATTCTTCTCTCTGGCTCTGTTCTGGTGCGGCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CAA 90 bp CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTTGCCAGATCAATTCTTaGGGGATGCCCAGAGAAGGG +
Preference number: 3 (lower is better)
Translates to: LTLVLKGRERARSRCQHPCQINS*GMPREG
Trigger: CCCTTCTCTGGGCATCCCCAAAGAATTGATCTGGCA...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR TCA 72 bp TGTAGAAAAACAGTCAAAGTGTCCACATTTGCATTGTaGGTTGCGCAGGGGCACCAGCTCCTCCGCTCATCC +
Preference number: 3 (lower is better)
Translates to: CRKTVKVSTFAL*VAQGHQLLRSS
Trigger: GGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGACACTTTGACTGTTTTTCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 72 bp GGCGGGTTTGTAACTGCCTTTTGGTTTGGTTTCAGATaGTGGTGGGTGGAGAATGGTCCAGATCGACTCTTC +
Preference number: 3 (lower is better)
Translates to: GGFVTAFWFGFR*WWVENGPDRLF
Trigger: GAAGAGTCGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp GAACAGCGTGTCTTGGGCGGGTTTGTAACTGCCTTTTaGTTTGGTTTCAGATGCTGGTGGGTGGAGAATGGT +
Preference number: 3 (lower is better)
Translates to: EQRVLGGFVTAF*FGFRCWWVENG
Trigger: ACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGACACGCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp AGCTCATGCAACCAGAAGAGTAACCCTGAGGCATCCTaGTGTCAGGCTCTGGGTGTGCTCAACAAACAACAT +
Preference number: 3 (lower is better)
Translates to: SSCNQKSNPEAS*CQALGVLNKQH
Trigger: ATGTTGTTTGTTGAGCACACCCAGAGCCTGACACCAGGATGCCTCAGGGTTACTCTTCTGGTTGCATGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR TCA 72 bp GTTTGTCGAGCCACCTTTCTAGAAGAGGCAGATGTTTaGTGTGCTTTGCTCTTGTGGGACAAGTGGGAAGGC +
Preference number: 3 (lower is better)
Translates to: VCRATFLEEADV*CALLLWDKWEG
Trigger: GCCTTCCCACTTGTCCCACAAGAGCAAAGCACATCAAACATCTGCCTCTTCTAGAAAGGTGGCTCGACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR TCA 72 bp CGAGCTGCTGCCCTTGGTCTCAGGCTTTTCTGGAAATaGACACCCCAAACTCCTACTACTGACCTTATGTTC +
Preference number: 3 (lower is better)
Translates to: RAAALGLRLFWK*TPQTPTTDLMF
Trigger: GAACATAAGGTCAGTAGTAGGAGTTTGGGGTGTTCATTTCCAGAAAAGCCTGAGACCAAGGGCAGCAGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR TCA 72 bp CACGCTATGTGTGAGGGAGAAGAGGGTCATAACAAATaGCACATACTGTCAACCCATGTCCCTTTCCCCTGG +
Preference number: 3 (lower is better)
Translates to: HAMCEGEEGHNK*HILSTHVPFPW
Trigger: CCAGGGGAAAGGGACATGGGTTGACAGTATGTGTCATTTGTTATGACCCTCTTCTCCCTCACACATAGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR TCA 72 bp CCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTaGTCTTATCCCCAGACACTGACAATGTCCCGGTCT +
Preference number: 3 (lower is better)
Translates to: PLVMIVMSATPD*SYPQTLTMSRS
Trigger: AGACCGGGACATTGTCAGTGTCTGGGGATAAGATCAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 72 bp GAACACAAGATAACCCTGACAGGAATCCAGGAGCTTTaGAGCTACCAGATCACAGGCACTGCCAAACAGGTT +
Preference number: 3 (lower is better)
Translates to: EHKITLTGIQEL*SYQITGTAKQV
Trigger: AACCTGTTTGGCAGTGCCTGTGATCTGGTAGCTGCAAAGCTCCTGGATTCCTGTCAGGGTTATCTTGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR GCA 72 bp AAAAACAGTCAAAGTGTCCACATTTGCATTGTGAGTTaGGCAGGGGCACCAGCTCCTCCGCTCATCCTTCAA +
Preference number: 3 (lower is better)
Translates to: KNSQSVHICIVS*AGAPAPPLILQ
Trigger: TTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGACACTTTGACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp CTTTTGGTTTGGTTTCAGATGCTGGTGGGTGGAGAATaGTCCAGATCGACTCTTCTGTTTGTCGAGCCACCT +
Preference number: 3 (lower is better)
Translates to: LLVWFQMLVGGE*SRSTLLFVEPP
Trigger: AGGTGGCTCGACAAACAGAAGAGTCGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp AAGGGAGCTCTTGCTGAAGACCCAGCTCCCTCTTTATaGGTAAACACTCAAGCTCTGGTCTCAGATATGGTG +
Preference number: 3 (lower is better)
Translates to: KGALAEDPAPSL*VNTQALVSDMV
Trigger: CACCATATCTGAGACCAGAGCTTGAGTGTTTACCCATAAAGAGGGAGCTGGGTCTTCAGCAAGAGCTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp GAGTATGGCAGGTCCTTCACTAAGGGTGTGGTACTTTaGGGACAGGAGAGCCTGCATAAAAACAAAGAATGG +
Preference number: 3 (lower is better)
Translates to: EYGRSFTKGVVL*GQESLHKNKEW
Trigger: CCATTCTTTGTTTTTATGCAGGCTCTCCTGTCCCCAAAGTACCACACCCTTAGTGAAGGACCTGCCATACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp TCTGGCAACAAGGTTTGTGCCAACTTCACAAAGTCTTaGCTTTCCTATAACATCAATGCCAGAGAGGCTGGG +
Preference number: 3 (lower is better)
Translates to: SGNKVCANFTKS*LSYNINAREAG
Trigger: CCCAGCCTCTCTGGCATTGATGTTATAGGAAAGCCAAGACTTTGTGAAGTTGGCACAAACCTTGTTGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp AACATGGCCCATTGTTTGCACAGGAACAAGAAACCCTaGAATGCCTTTGGTGATGATAGTGATGTCAGCGAC +
Preference number: 3 (lower is better)
Translates to: NMAHCLHRNKKP*NAFGDDSDVSD
Trigger: GTCGCTGACATCACTATCATCACCAAAGGCATTCCAGGGTTTCTTGTTCCTGTGCAAACAATGGGCCATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR TCA 72 bp GCCAGAGCACCCAGATTACATGCTAGCCTGCATGTTTaGAGGATGGTGTGGAACTTAGTTTCTGTAATTCTG +
Preference number: 3 (lower is better)
Translates to: ARAPRLHASLHV*RMVWNLVSVIL
Trigger: CAGAATTACAGAAACTAAGTTCCACACCATCCTTCAAACATGCAGGCTAGCATGTAATCTGGGTGCTCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp TTTGTAACTGCCTTTTGGTTTGGTTTCAGATGCTGGTaGGTGGAGAATGGTCCAGATCGACTCTTCTGTTTG +
Preference number: 3 (lower is better)
Translates to: FVTAFWFGFRCW*VENGPDRLFCL
Trigger: CAAACAGAAGAGTCGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CAA 90 bp CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTTTTCAAAATTCTGTCTaGTTTCCTAAGCTCACACAC +
Preference number: 3 (lower is better)
Translates to: LTLVLKGRERARSRCQHPFQNSV*FPKLTH
Trigger: GTGTGTGAGCTTAGGAAACAAGACAGAATTTTGAAA...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR-3UTR CAA 90 bp AATGCCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTGATCTTATCCCCACTCATCTGCAAAGCTTaGAAAGCAGATGTAATGGAG +
Preference number: 3 (lower is better)
Translates to: NAFGDDSDVSDSRLILSPLICKA*KADVME
Trigger: CTCCATTACATCTGCTTTCAAAGCTTTGCAGATGAG...TGGGGATAAGATCAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp AGAAGAGTAACCCTGAGGCATCCTGGTGTCAGGCTCTaGGTGTGCTCAACAAACAACATTAACAACTTTAAA +
Preference number: 3 (lower is better)
Translates to: RRVTLRHPGVRL*VCSTNNINNFK
Trigger: TTTAAAGTTGTTAATGTTGTTTGTTGAGCACACCCAGAGCCTGACACCAGGATGCCTCAGGGTTACTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp GTATGCTCAACACATCCAGCATGTCTATGTGTAAGCTaGACACAGAGAAAAAGAATGCCACGTTGGTGTTTG +
Preference number: 3 (lower is better)
Translates to: VCSTHPACLCVS*TQRKRMPRWCL
Trigger: CAAACACCAACGTGGCATTCTTTTTCTCTGTGTCCAGCTTACACATAGACATGCTGGATGTGTTGAGCATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR TCA 72 bp GCTTTTCTGGAAATGAACACCCCAAACTCCTACTACTaGCCTTATGTTCTAGAAGAGCCTAGATCAATCCCA +
Preference number: 3 (lower is better)
Translates to: AFLEMNTPNSYY*PYVLEEPRSIP
Trigger: TGGGATTGATCTAGGCTCTTCTAGAACATAAGGTCAGTAGTAGGAGTTTGGGGTGTTCATTTCCAGAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CCA 72 bp TGTGTAAGCTGGACACAGAGAAAAAGAATGCCACGTTaGTGTTTGGAACCAAATTCCTCAGTTGTGGGTAAA +
Preference number: 3 (lower is better)
Translates to: CVSWTQRKRMPR*CLEPNSSVVGK
Trigger: TTTACCCACAACTGAGGAATTTGGTTCCAAACACCAACGTGGCATTCTTTTTCTCTGTGTCCAGCTTACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR TCA 72 bp TCCTTCAAGTGTGTGTTAAACAGAGTAACTGAAAAGTaGGGTTTAATCACACATGAATCTGTACCCCAAAGA +
Preference number: 3 (lower is better)
Translates to: SFKCVLNRVTEK*GLITHESVPQR
Trigger: TCTTTGGGGTACAGATTCATGTGTGATTAAACCTCACTTTTCAGTTACTCTGTTTAACACACACTTGAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CCA 90 bp TTTGGCCGGCTGGGGCAGGCCATCTCTGGACTTGGGAACAGCGTGTCTTGGGCGTGCCGCAACTGGGAGTaGATGAAGCGCCACATGAGC +
Preference number: 4 (lower is better)
Translates to: FGRLGQAISGLGNSVSWACRNWE*MKRHMS
Trigger: GCTCATGTGGCGCTTCATCCACTCCCAGTTGCGGCA...CGCCCAAGACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CCA 90 bp TTTGGCCGGCTGGGGCAGGCCATCTCTGGACTTGGGAACAGCGTGTCTTGGGCGGGTGACCAGGTCCTTTaGGCCATAGTGGTAGTGCAC +
Preference number: 4 (lower is better)
Translates to: FGRLGQAISGLGNSVSWAGDQVL*AIVVVH
Trigger: GTGCACTACCACTATGGCCCAAAGGACCTGGTCACC...CGCCCAAGACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 72 bp GCAAGTTTGGCCGGCTGGGGCAGGCCATCTCTGGACTaGGGAACAGCGTGTCTTGGGCGGGTTTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: ASLAGWGRPSLD*GTACLGRVCNC
Trigger: GCAGTTACAAACCCGCCCAAGACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 72 bp TGCAGTAAGGGACAAGACCACCGGCTGGGAGGGTTATaGCACAACCCGGAATGGCAGGCGGGAACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: CSKGQDHRLGGL*HNPEWQAGTGR
Trigger: CCTGCCTGTTCCCGCCTGCCATTCCGGGTTGTGCAATAACCCTCCCAGCCGGTGGTCTTGTCCCTTACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR TCA 90 bp TCCCCCTTTGATGCCAAGGCTTCTGCTGGTGGAGACGAGCATGGGCAGGAGGGTGCCACCGCGCTGAGATaGAAGACAAGCAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SPFDAKASAGGDEHGQEGATALR*KTSSCP
Trigger: TGGACAGCTGCTTGTCTTTCATCTCAGCGCGGTGGC...ACCCTCCTGCCCATGCTCGTCTCCACCAGCAGAAGCCTTGGCATCAAAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CCA 90 bp CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTCGCCAGTGCCGCAACTaGGAGTGGATGAAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: PQASLIRQEAWVSAAGLPRQCRN*EWMKRH
Trigger: GTGGCGCTTCATCCACTCCCAGTTGCGGCACTGGCG...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR TCA 90 bp GTAAGGGATGATGACGACCTCTCCTGTGGGTCCCCTCTCTCCAGATATTGCAGGAACCAGGTTCTCTCTTaGGGAGCTTGGCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: VRDDDDLSCGSPLSRYCRNQVLS*GAWLGA
Trigger: GGCCCCCAGCCAAGCTCCTCAAGAGAGAACCTGGTT...CCTGCAATATCTGGAGAGAGGGGACCCACAGGAGAGGTCGTCATCATCCCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CCA 90 bp GCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACCACATGAGCCAGGCCTaGGCGACACACACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AGAPAPPLILQVCVKQSNHMSQA*ATHTSS
Trigger: GCTGCTGGTGTGTGTCGCCCAGGCCTGGCTCATGTG...GTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CCA 90 bp TCCCCCTTTGATGCCAAGGCTTCTGCTGGTGGAGACGAGCATGGGCAGGAGGGTTCCTGGACCACAGCATaGAAGATGATGGTGATGACG +
Preference number: 4 (lower is better)
Translates to: SPFDAKASAGGDEHGQEGSWTTA*KMMVMT
Trigger: CGTCATCACCATCATCTTCCATGCTGTGGTCCAGGA...ACCCTCCTGCCCATGCTCGTCTCCACCAGCAGAAGCCTTGGCATCAAAGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CCA 90 bp GAAGGCAGGCTGCTTTCCAATTCAAATGACACACTGGAAGCTCTCTGGAGTCCTGCTTGGCTGGGGGCCTaGGGACAGCAGAGACTCTAC +
Preference number: 4 (lower is better)
Translates to: EGRLLSNSNDTLEALWSPAWLGA*GQQRLY
Trigger: GTAGAGTCTCTGCTGTCCCCAGGCCCCCAGCCAAGC...AGGACTCCAGAGAGCTTCCAGTGTGTCATTTGAATTGGAAAGCAGCCTGCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 72 bp CTGTTTCTGCAGAGAGATGAAGTTGAGGTTGCAAGTTaGGCCGGCTGGGGCAGGCCATCTCTGGACTTGGGA +
Preference number: 4 (lower is better)
Translates to: LFLQRDEVEVAS*AGWGRPSLDLG
Trigger: TCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAACTTGCAACCTCAACTTCATCTCTCTGCAGAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CCA 90 bp CATGCAACCAGAAGAGTAACCCTGAGGCATCCTGGTGTCAGGCTCTGGGTGTGCTCGGGGTCAAACACTTaGTTTTCCACCCGAGCCAAT +
Preference number: 4 (lower is better)
Translates to: HATRRVTLRHPGVRLWVCSGSNT*FSTRAN
Trigger: ATTGGCTCGGGTGGAAAACCAAGTGTTTGACCCCGA...GCACACCCAGAGCCTGACACCAGGATGCCTCAGGGTTACTCTTCTGGTTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CCA 90 bp GTCCACATTTGCATTGTGAGTTGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTCAGAGACTCTACGCTTaGCACTCTGCTCCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: VHICIVSCAGAPAPPLILQRLYA*HSAPSN
Trigger: ATTGGAAGGAGCAGAGTGCCAAGCGTAGAGTCTCTG...AAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CCA 90 bp CTGCTCTTTATACCCCTGTTCCTCCAAGACCTTCACATGTCTCATGCTTGTCACCTTGAGGAGCTTGGCTaGGGGCCTGGGGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: LLFIPLFLQDLHMSHACHLEELG*GPGDSR
Trigger: TCTGCTGTCCCCAGGCCCCCAGCCAAGCTCCTCAAG...GTGACAAGCATGAGACATGTGAAGGTCTTGGAGGAACAGGGGTATAAAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR TCA 90 bp GAAGGCAGGCTGCTTTCCAATTCAAATGACACACTGGAAGCTCTCTGGAGTCCTACCACGCCACCGCGCTaGGATGAAAGACAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: EGRLLSNSNDTLEALWSPTTPPR*DERQAA
Trigger: AGCTGCTTGTCTTTCATCTCAGCGCGGTGGCGTGGT...AGGACTCCAGAGAGCTTCCAGTGTGTCATTTGAATTGGAAAGCAGCCTGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 72 bp GGAACAGCGTGTCTTGGGCGGGTTTGTAACTGCCTTTaGGTTTGGTTTCAGATGCTGGTGGGTGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: GTACLGRVCNCL*VWFQMLVGGEW
Trigger: CCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGACACGCTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR TCA 90 bp GAAGGCAGGCTGCTTTCCAATTCAAATGACACACTGGAAGCTCTCTGGAGTCCTGAGTTTCTTAGTCCGTaGGGAGGTCCCGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: EGRLLSNSNDTLEALWSPEFLSP*GGPVLC
Trigger: GCAGAGAACGGGACCTCCTCACGGACTAAGAAACTC...AGGACTCCAGAGAGCTTCCAGTGTGTCATTTGAATTGGAAAGCAGCCTGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CCA 90 bp GTCCACATTTGCATTGTGAGTTGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTTCTAAGATGTACTCCTaGACCACAGCATGGAAGATG +
Preference number: 4 (lower is better)
Translates to: VHICIVSCAGAPAPPLILSKMYS*TTAWKM
Trigger: CATCTTCCATGCTGTGGTCCAGGAGTACATCTTAGA...AAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR GCA 90 bp CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTGCAGAAACCGATGTCTaGATGGTTGTGGATGATGAA +
Preference number: 4 (lower is better)
Translates to: PQASLIRQEAWVSAAGLPAETDV*MVVDDE
Trigger: TTCATCATCCACAACCATGCAGACATCGGTTTCTGC...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR GCA 90 bp GCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACAGTTCAGGTAGTGAGTaGAACCAGTATGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: AGAPAPPLILQVCVKQSNSSGSE*NQYASC
Trigger: ACAGCTGGCATACTGGTTGCACTCACTACCTGAACT...GTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR GCA 90 bp AATGCCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTGATCTTATCCCCACAATACTCCCGCCAGTaGCGCAACTGGGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: NAFGDDSDVSDSRLILSPQYSRQ*RNWEWM
Trigger: CATCCACTCCCAGTTGCGGCACTGGCGGGAGTATTG...TGGGGATAAGATCAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 72 bp GAAAAACAGTCAAAGTGTCCACATTTGCATTGTGAGTaGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTCA +
Preference number: 4 (lower is better)
Translates to: EKQSKCPHLHCE*RRGTSSSAHPS
Trigger: TGAAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGACACTTTGACTGTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR GCA 90 bp GAAGGCAGGCTGCTTTCCAATTCAAATGACACACTGGAAGCTCTCTGGAGTCCTCTCGTTATTCTCGTCTaGAAAGTGGAAGAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: EGRLLSNSNDTLEALWSPLVILV*KVEEPS
Trigger: GCTCGGCTCTTCCACTTTGCAGACGAGAATAACGAG...AGGACTCCAGAGAGCTTCCAGTGTGTCATTTGAATTGGAAAGCAGCCTGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR GCA 90 bp TGCTCTTTATACCCCTGTTCCTCCAAGACCTTCACATGTCTCATGCTTGTCACAACACCAGCAGCAGCATaGCAAGCCTACAAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: CSLYPCSSKTFTCLMLVTTPAAA*QAYKAR
Trigger: CCTTGCCTTGTAGGCTTGGCATGCTGCTGCTGGTGT...TGTGACAAGCATGAGACATGTGAAGGTCTTGGAGGAACAGGGGTATAAAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CCA 90 bp CTGCTCTTTATACCCCTGTTCCTCCAAGACCTTCACATGTCTCATGCTTGTCACGAAAGAGGGCCTCGGTaGAGTACTGCAGTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: LLFIPLFLQDLHMSHACHERGPR*STAVVA
Trigger: TGCTACTACTGCAGTACTCCACCGAGGCCCTCTTTC...GTGACAAGCATGAGACATGTGAAGGTCTTGGAGGAACAGGGGTATAAAGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 72 bp TGGTGGGTGGAGAATGGTCCAGATCGACTCTTCTGTTaGTCGAGCCACCTTTCTAGAAGAGGCAGATGTTTG +
Preference number: 4 (lower is better)
Translates to: WWVENGPDRLFC*SSHLSRRGRCL
Trigger: CAAACATCTGCCTCTTCTAGAAAGGTGGCTCGACAAACAGAAGAGTCGATCTGGACCATTCTCCACCCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 72 bp AAAGATCTCGAAGACGTCACAACACATTCTGTAAGATaGCCACAGAAACCCACGCAGGGCCGTGCGAATGAC +
Preference number: 4 (lower is better)
Translates to: KDLEDVTTHSVR*PQKPTQGRAND
Trigger: GTCATTCGCACGGCCCTGCGTGGGTTTCTGTGGCAATCTTACAGAATGTGTTGTGACGTCTTCGAGATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 72 bp CAGGCTAATGTAGAAAAACAGTCAAAGTGTCCACATTaGCATTGTGAGTTGCGCAGGGGCACCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QANVEKQSKCPH*HCELRRGTSSS
Trigger: GGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGACACTTTGACTGTTTTTCTACATTAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 72 bp TGTTTGTCGAGCCACCTTTCTAGAAGAGGCAGATGTTaGATGTGCTTTGCTCTTGTGGGACAAGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CLSSHLSRRGRC*MCFALVGQVGR
Trigger: CCTTCCCACTTGTCCCACAAGAGCAAAGCACATCAAACATCTGCCTCTTCTAGAAAGGTGGCTCGACAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR TCA 90 bp AAGCTGGACACAGAGAAAAAGAATGCCACGTTGGTGTTTGGAACCAAATTCCTCCGTAGAACAAGATGGTaGCCAGGTCCTTTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: KLDTEKKNATLVFGTKFLRRTRW*PGPLGH
Trigger: ATGGCCCAAAGGACCTGGTCACCATCTTGTTCTACG...GAGGAATTTGGTTCCAAACACCAACGTGGCATTCTTTTTCTCTGTGTCCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR GCA 90 bp GAAGGCAGGCTGCTTTCCAATTCAAATGACACACTGGAAGCTCTCTGGAGTCCTCACTGTCTCACTGTCTaGTGTAGGCACACTAATGTT +
Preference number: 4 (lower is better)
Translates to: EGRLLSNSNDTLEALWSPHCLTV*CRHTNV
Trigger: AACATTAGTGTGCCTACAGCAGACAGTGAGACAGTG...AGGACTCCAGAGAGCTTCCAGTGTGTCATTTGAATTGGAAAGCAGCCTGCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CCA 90 bp CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTAAACCGATGTCTGCATaGTTGTGGATGATGAACTCC +
Preference number: 4 (lower is better)
Translates to: LTLVLKGRERARSRCQHPKPMSA*LWMMNS
Trigger: GGAGTTCATCATCCACAACCATGCAGACATCGGTTT...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR GCA 90 bp GTGGAACTTAGTTTCTGTAATTCTGGCAACAAGGTTTGTGCCAACTTCACAAAGGGAGGTCCCGTTCTCTaGCTTCACCACTCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: VELSFCNSGNKVCANFTKGGPVL*LHHSVF
Trigger: GAAAACGGAGTGGTGAAGGCAGAGAACGGGACCTCC...CTTTGTGAAGTTGGCACAAACCTTGTTGCCAGAATTACAGAAACTAAGTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 72 bp GGAAGGCCAGGCAGAATATTAGGTAACATTAATGTCTaGTGTTACCAAGAACTGCTCCCCTATACTCTAGCT +
Preference number: 4 (lower is better)
Translates to: GRPGRILGNINV*CYQELLPYTLA
Trigger: AGCTAGAGTATAGGGGAGCAGTTCTTGGTAACACAAGACATTAATGTTACCTAATATTCTGCCTGGCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 72 bp AGCTGGACACAGAGAAAAAGAATGCCACGTTGGTGTTaGGAACCAAATTCCTCAGTTGTGGGTAAACTAGAT +
Preference number: 4 (lower is better)
Translates to: SWTQRKRMPRWC*EPNSSVVGKLD
Trigger: ATCTAGTTTACCCACAACTGAGGAATTTGGTTCCAAACACCAACGTGGCATTCTTTTTCTCTGTGTCCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
3UTR CAA 72 bp CATAAATATGGCAGGTACACATTTTCCTTGAGTTCCTaGTTGAATTTGGTCCATAACATGAACAGGCTAATG +
Preference number: 4 (lower is better)
Translates to: HKYGRYTFSLSS*LNLVHNMNRLM
Trigger: CATTAGCCTGTTCATGTTATGGACCAAATTCAACAAGGAACTCAAGGAAAATGTGTACCTGCCATATTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS CCA 90 bp GCACTCTGCTCCTTCCAATACTCCCGCCAGTGCCGCAACTGGGAGTaGATGAAGCGCCACATGAGCCAGGCCTGGGCGACACACACCAGC +
Preference number: 5 (lower is better)
Translates to: ALCSFQYSRQCRNWE*MKRHMSQAWATHTS
Trigger: GCTGGTGTGTGTCGCCCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGTTGCGGCACTGGCGGGAGTATTGGAAGGAGCAGAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS CCA 90 bp CGCTTGGCACTCTGCTCCTTCCAATACTCCCGCCAGTGCCGCAACTaGGAGTGGATGAAGCGCCACATGAGCCAGGCCTGGGCGACACAC +
Preference number: 5 (lower is better)
Translates to: RLALCSFQYSRQCRN*EWMKRHMSQAWATH
Trigger: GTGTGTCGCCCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGTTGCGGCACTGGCGGGAGTATTGGAAGGAGCAGAGTGCCAAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS GCA 90 bp TTGGCTGGGGGCCTGGGGACAGCAGAGACTCTACGCTTGGCACTCTaGTCCTTCCAATACTCCCGCCAGTGCCGCAACTGGGAGTGGATG +
Preference number: 5 (lower is better)
Translates to: LAGGLGTAETLRLAL*SFQYSRQCRNWEWM
Trigger: CATCCACTCCCAGTTGCGGCACTGGCGGGAGTATTGGAAGGAGCAGAGTGCCAAGCGTAGAGTCTCTGCTGTCCCCAGGCCCCCAGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS GCA 90 bp GAGACTCTACGCTTGGCACTCTGCTCCTTCCAATACTCCCGCCAGTaGCGCAACTGGGAGTGGATGAAGCGCCACATGAGCCAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ETLRLALCSFQYSRQ*RNWEWMKRHMSQAW
Trigger: CCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGTTGCGGCACTGGCGGGAGTATTGGAAGGAGCAGAGTGCCAAGCGTAGAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS CCA 90 bp CGTCTGCAAAGTGGAAGAGCCGAGCCATGTGAAAGAGGGCCTCGGTaGAGTACTGCAGTAGTAGCAAGATCAGCCCCAGGCGGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: RLQSGRAEPCERGPR*STAVVARSAPGGSG
Trigger: ACCTGAGCCGCCTGGGGCTGATCTTGCTACTACTGCAGTACTCCACCGAGGCCCTCTTTCACATGGCTCGGCTCTTCCACTTTGCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CAA 90 bp GGTGGCCAAAGGAACACATGGCGGGCGATGGAGTCCTTGGGGCTTCCTGTTTCTGCAGAGACTCTACGCTaGGCACTCTGCTCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: GGQRNTWRAMESLGLPVSAETLR*ALCSFQ
Trigger: TTGGAAGGAGCAGAGTGCCAAGCGTAGAGTCTCTGC...AGAAACAGGAAGCCCCAAGGACTCCATCGCCCGCCATGTGTTCCTTTGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CAA 90 bp GCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACTCTCTCTTGAGGAGCTaGGCTGGGGGCCTGGGGACA +
Preference number: 5 (lower is better)
Translates to: AGAPAPPLILQVCVKQSNSLLRS*AGGLGT
Trigger: TGTCCCCAGGCCCCCAGCCAAGCTCCTCAAGAGAGA...GTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CAA 90 bp CAGAGAGATGAAGTTGAGGTTGCAAGTTTGGCCGGCTGGGGCAGGCCATCTCTGCCGATGTCTGCATGGTaGTGGATGATGAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: QRDEVEVASLAGWGRPSLPMSAW*WMMNSW
Trigger: CCAGGAGTTCATCATCCACAACCATGCAGACATCGG...CAGAGATGGCCTGCCCCAGCCGGCCAAACTTGCAACCTCAACTTCATCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CAA 90 bp TCCCCCTTTGATGCCAAGGCTTCTGCTGGTGGAGACGAGCATGGGCAGGAGGGTAATAGGAAGGCAGTCTaGGCTGTGACCTCGAACATA +
Preference number: 5 (lower is better)
Translates to: SPFDAKASAGGDEHGQEGNRKAV*AVTSNI
Trigger: TATGTTCGAGGTCACAGCCAAGACTGCCTTCCTATT...ACCCTCCTGCCCATGCTCGTCTCCACCAGCAGAAGCCTTGGCATCAAAGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CAA 90 bp CAGGGGGTTCTCGGTCCACCAGTCCTGCCACTGGCACCTACTGGAATTCCAGGGCTTCCCAGAGGCTTCTaGGGTTTGTTAAATATCCTT +
Preference number: 5 (lower is better)
Translates to: QGVLGPPVLPLAPTGIPGLPRGF*GLLNIL
Trigger: AAGGATATTTAACAAACCCAAGAAGCCTCTGGGAAG...CCCTGGAATTCCAGTAGGTGCCAGTGGCAGGACTGGTGGACCGAGAACCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS TCA 90 bp AGCCTCTCGTTATTCTCGTCTGCAAAGTGGAAGAGCCGAGCCATGTaGAAGAGGGCCTCGGTGGAGTACTGCAGTAGTAGCAAGATCAGC +
Preference number: 5 (lower is better)
Translates to: SLSLFSSAKWKSRAM*KRASVEYCSSSKIS
Trigger: GCTGATCTTGCTACTACTGCAGTACTCCACCGAGGCCCTCTTTCACATGGCTCGGCTCTTCCACTTTGCAGACGAGAATAACGAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS GCA 90 bp CATAAGCCCGATGAGGACGCAGAGCACCAAGCAGAAACCGATGTCTaGATGGTTGTGGATGATGAACTCCTGGCTGAAGAGCGGGTAACT +
Preference number: 5 (lower is better)
Translates to: HKPDEDAEHQAETDV*MVVDDELLAEERVT
Trigger: AGTTACCCGCTCTTCAGCCAGGAGTTCATCATCCACAACCATGCAGACATCGGTTTCTGCTTGGTGCTCTGCGTCCTCATCGGGCTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS CCA 90 bp CTACAAGGCAAGGTGTTAAAGTTCCCTTTCTCGGGGTCAAACACTTaGTTTTCCACCCGAGCCAATCCAAAGCCAATGGTCAGCACAGCG +
Preference number: 5 (lower is better)
Translates to: LQGKVLKFPFSGSNT*FSTRANPKPMVSTA
Trigger: CGCTGTGCTGACCATTGGCTTTGGATTGGCTCGGGTGGAAAACCAAGTGTTTGACCCCGAGAAAGGGAACTTTAACACCTTGCCTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CAA 90 bp ATCAATGCCAGAGAGGCTGGGTGGGTGAGAAAGCACCCCATAGTTCTCCCAAGCAGGCGTTTGCTGATTTaGTCTAAGATGTACTCCTGG +
Preference number: 5 (lower is better)
Translates to: INAREAGWVRKHPIVLPSRRLLI*SKMYSW
Trigger: CCAGGAGTACATCTTAGACAAAATCAGCAAACGCCT...GCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CAA 90 bp GAAGGCAGGCTGCTTTCCAATTCAAATGACACACTGGAAGCTCTCTGGAGTCCTGTACAGACAAATGTATaGCAGCTGGCGTGGGACTTC +
Preference number: 5 (lower is better)
Translates to: EGRLLSNSNDTLEALWSPVQTNV*QLAWDF
Trigger: GAAGTCCCACGCCAGCTGCAATACATTTGTCTGTAC...AGGACTCCAGAGAGCTTCCAGTGTGTCATTTGAATTGGAAAGCAGCCTGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS-3UTR CAA 90 bp AATGCCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTGATCTTATCCCCACCAGATTCATTGAACTaGCTGTGTTTGACCTTGGAG +
Preference number: 5 (lower is better)
Translates to: NAFGDDSDVSDSRLILSPPDSLN*LCLTLE
Trigger: CTCCAAGGTCAAACACAGCAAGTTCAATGAATCTGG...TGGGGATAAGATCAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS CCA 72 bp TGGCTGGGGGCCTGGGGACAGCAGAGACTCTACGCTTaGCACTCTGCTCCTTCCAATACTCCCGCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: WLGAWGQQRLYA*HSAPSNTPASA
Trigger: GGCACTGGCGGGAGTATTGGAAGGAGCAGAGTGCCAAGCGTAGAGTCTCTGCTGTCCCCAGGCCCCCAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS CAA 90 bp TTGAGGAGCTTGGCTGGGGGCCTGGGGACAGCAGAGACTCTACGCTaGGCACTCTGCTCCTTCCAATACTCCCGCCAGTGCCGCAACTGG +
Preference number: 6 (lower is better)
Translates to: LRSLAGGLGTAETLR*ALCSFQYSRQCRNW
Trigger: CCAGTTGCGGCACTGGCGGGAGTATTGGAAGGAGCAGAGTGCCAAGCGTAGAGTCTCTGCTGTCCCCAGGCCCCCAGCCAAGCTCCTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS GCA 72 bp GGCCTGGGGACAGCAGAGACTCTACGCTTGGCACTCTaGTCCTTCCAATACTCCCGCCAGTGCCGCAACTGG +
Preference number: 6 (lower is better)
Translates to: GLGTAETLRLAL*SFQYSRQCRNW
Trigger: CCAGTTGCGGCACTGGCGGGAGTATTGGAAGGAGCAGAGTGCCAAGCGTAGAGTCTCTGCTGTCCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS CCA 72 bp TCCTTCCAATACTCCCGCCAGTGCCGCAACTGGGAGTaGATGAAGCGCCACATGAGCCAGGCCTGGGCGACA +
Preference number: 6 (lower is better)
Translates to: SFQYSRQCRNWE*MKRHMSQAWAT
Trigger: TGTCGCCCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGTTGCGGCACTGGCGGGAGTATTGGAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS CCA 72 bp CTCTGCTCCTTCCAATACTCCCGCCAGTGCCGCAACTaGGAGTGGATGAAGCGCCACATGAGCCAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: LCSFQYSRQCRN*EWMKRHMSQAW
Trigger: CCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGTTGCGGCACTGGCGGGAGTATTGGAAGGAGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS CAA 72 bp TTGGCTGGGGGCCTGGGGACAGCAGAGACTCTACGCTaGGCACTCTGCTCCTTCCAATACTCCCGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: LAGGLGTAETLR*ALCSFQYSRQC
Trigger: GCACTGGCGGGAGTATTGGAAGGAGCAGAGTGCCAAGCGTAGAGTCTCTGCTGTCCCCAGGCCCCCAGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS GCA 72 bp CGCTTGGCACTCTGCTCCTTCCAATACTCCCGCCAGTaGCGCAACTGGGAGTGGATGAAGCGCCACATGAGC +
Preference number: 6 (lower is better)
Translates to: RLALCSFQYSRQ*RNWEWMKRHMS
Trigger: GCTCATGTGGCGCTTCATCCACTCCCAGTTGCGGCACTGGCGGGAGTATTGGAAGGAGCAGAGTGCCAAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS CCA 72 bp AACTGGGAGTGGATGAAGCGCCACATGAGCCAGGCCTaGGCGACACACACCAGCAGCAGCATGCCAAGCCTA +
Preference number: 6 (lower is better)
Translates to: NWEWMKRHMSQA*ATHTSSSMPSL
Trigger: TAGGCTTGGCATGCTGCTGCTGGTGTGTGTCGCCCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS CCA 72 bp AGTGGAAGAGCCGAGCCATGTGAAAGAGGGCCTCGGTaGAGTACTGCAGTAGTAGCAAGATCAGCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: SGRAEPCERGPR*STAVVARSAPG
Trigger: GCCTGGGGCTGATCTTGCTACTACTGCAGTACTCCACCGAGGCCCTCTTTCACATGGCTCGGCTCTTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS CCA 72 bp AGGACGCAGAGCACCAAGCAGAAACCGATGTCTGCATaGTTGTGGATGATGAACTCCTGGCTGAAGAGCGGG +
Preference number: 6 (lower is better)
Translates to: RTQSTKQKPMSA*LWMMNSWLKSG
Trigger: CCCGCTCTTCAGCCAGGAGTTCATCATCCACAACCATGCAGACATCGGTTTCTGCTTGGTGCTCTGCGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS TCA 72 bp TTATTCTCGTCTGCAAAGTGGAAGAGCCGAGCCATGTaGAAGAGGGCCTCGGTGGAGTACTGCAGTAGTAGC +
Preference number: 6 (lower is better)
Translates to: LFSSAKWKSRAM*KRASVEYCSSS
Trigger: GCTACTACTGCAGTACTCCACCGAGGCCCTCTTTCACATGGCTCGGCTCTTCCACTTTGCAGACGAGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS GCA 72 bp GATGAGGACGCAGAGCACCAAGCAGAAACCGATGTCTaGATGGTTGTGGATGATGAACTCCTGGCTGAAGAG +
Preference number: 6 (lower is better)
Translates to: DEDAEHQAETDV*MVVDDELLAEE
Trigger: CTCTTCAGCCAGGAGTTCATCATCCACAACCATGCAGACATCGGTTTCTGCTTGGTGCTCTGCGTCCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS CCA 72 bp GATGACGACGTAGAACAAGATGGTGACCAGGTCCTTTaGGCCATAGTGGTAGTGCACTGTCTCACTGTCTGC +
Preference number: 6 (lower is better)
Translates to: DDDVEQDGDQVL*AIVVVHCLTVC
Trigger: GCAGACAGTGAGACAGTGCACTACCACTATGGCCCAAAGGACCTGGTCACCATCTTGTTCTACGTCGTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS CAA 90 bp CCTACAAGGCAAGGTGTTAAAGTTCCCTTTCTCGGGGTCAAACACTaGGTTTTCCACCCGAGCCAATCCAAAGCCAATGGTCAGCACAGC +
Preference number: 6 (lower is better)
Translates to: PTRQGVKVPFLGVKH*VFHPSQSKANGQHS
Trigger: GCTGTGCTGACCATTGGCTTTGGATTGGCTCGGGTGGAAAACCAAGTGTTTGACCCCGAGAAAGGGAACTTTAACACCTTGCCTTGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS TCA 72 bp GCCCCAGGCGGCTCAGGTTTAAGAGGTATGCCCCAGTaGTGTGAAGAAGGTACAGACAAATGTATTGCAGCT +
Preference number: 6 (lower is better)
Translates to: APGGSGLRGMPQ*CEEGTDKCIAA
Trigger: AGCTGCAATACATTTGTCTGTACCTTCTTCACATCACTGGGGCATACCTCTTAAACCTGAGCCGCCTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS TCA 72 bp AGGCGGCTCAGGTTTAAGAGGTATGCCCCAGTGATGTaGAGAAGGTACAGACAAATGTATTGCAGCTGGCGT +
Preference number: 6 (lower is better)
Translates to: RRLRFKRYAPVM*RRYRQMYCSWR
Trigger: ACGCCAGCTGCAATACATTTGTCTGTACCTTCTTCACATCACTGGGGCATACCTCTTAAACCTGAGCCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS CCA 72 bp GTGAAGAAGGTACAGACAAATGTATTGCAGCTGGCGTaGGACTTCTTCCTTCCGCACCTTCTGGAAGTAGAG +
Preference number: 6 (lower is better)
Translates to: VKKVQTNVLQLA*DFFLPHLLEVE
Trigger: CTCTACTTCCAGAAGGTGCGGAAGGAAGAAGTCCCACGCCAGCTGCAATACATTTGTCTGTACCTTCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6
CDS CAA 72 bp CAAGGTGTTAAAGTTCCCTTTCTCGGGGTCAAACACTaGGTTTTCCACCCGAGCCAATCCAAAGCCAATGGT +
Preference number: 6 (lower is better)
Translates to: QGVKVPFLGVKH*VFHPSQSKANG
Trigger: ACCATTGGCTTTGGATTGGCTCGGGTGGAAAACCAAGTGTTTGACCCCGAGAAAGGGAACTTTAACACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037998.6