Pregenerated sensors for TRAM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041779Ensembl transcript IDs: ENSMUST00000037998.6
Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GGGAAGGGGGTCACAGACTCCTGTGGACATGGCTGTGTCAGCTCATaGAACCAGAAGAGTAACCCTGAGGCATCCTGGTGTCAGGCTCTG | + |
Preference number: 1 (lower is better) Translates to: GKGVTDSCGHGCVSS*NQKSNPEASWCQAL Trigger: CAGAGCCTGACACCAGGATGCCTCAGGGTTACTCTTCTGGTTGCATGAGCTGACACAGCCATGTCCACAGGAGTCTGTGACCCCCTTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR GCA 90 bp | AGGGATGATGACGACCTCTCCTGTGGGTCCCCTCTCTCCAGATATTaGAGGATGGATGCAGTAAGGGACAAGACCACCGGCTGGGAGGGT | + |
Preference number: 1 (lower is better) Translates to: RDDDDLSCGSPLSRY*RMDAVRDKTTGWEG Trigger: ACCCTCCCAGCCGGTGGTCTTGTCCCTTACTGCATCCATCCTGCAATATCTGGAGAGAGGGGACCCACAGGAGAGGTCGTCATCATCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CCA 90 bp | CTGTTTCTGCAGAGAGATGAAGTTGAGGTTGCAAGTTTGGCCGGCTaGGGCAGGCCATCTCTGGACTTGGGAACAGCGTGTCTTGGGCGG | + |
Preference number: 1 (lower is better) Translates to: LFLQRDEVEVASLAG*GRPSLDLGTACLGR Trigger: CCGCCCAAGACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAACTTGCAACCTCAACTTCATCTCTCTGCAGAAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR GCA 90 bp | AAGGAACACATGGCGGGCGATGGAGTCCTTGGGGCTTCCTGTTTCTaGAGAGAGATGAAGTTGAGGTTGCAAGTTTGGCCGGCTGGGGCA | + |
Preference number: 1 (lower is better) Translates to: KEHMAGDGVLGASCF*REMKLRLQVWPAGA Trigger: TGCCCCAGCCGGCCAAACTTGCAACCTCAACTTCATCTCTCTGCAGAAACAGGAAGCCCCAAGGACTCCATCGCCCGCCATGTGTTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR GCA 90 bp | CTCCCAAGCCTGCTAACAGCCCAGAAGTCAAGGCTGGCGAGCTGCTaGCCTTGGTCTCAGGCTTTTCTGGAAATGAACACCCCAAACTCC | + |
Preference number: 1 (lower is better) Translates to: LPSLLTAQKSRLASC*PWSQAFLEMNTPNS Trigger: GGAGTTTGGGGTGTTCATTTCCAGAAAAGCCTGAGACCAAGGGCAGCAGCTCGCCAGCCTTGACTTCTGGGCTGTTAGCAGGCTTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR GCA 90 bp | CGACCTCTCCTGTGGGTCCCCTCTCTCCAGATATTGCAGGATGGATaGAGTAAGGGACAAGACCACCGGCTGGGAGGGTTATTGCACAAC | + |
Preference number: 1 (lower is better) Translates to: RPLLWVPSLQILQDG*SKGQDHRLGGLLHN Trigger: GTTGTGCAATAACCCTCCCAGCCGGTGGTCTTGTCCCTTACTGCATCCATCCTGCAATATCTGGAGAGAGGGGACCCACAGGAGAGGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CCA 90 bp | TCCAGATATTGCAGGATGGATGCAGTAAGGGACAAGACCACCGGCTaGGAGGGTTATTGCACAACCCGGAATGGCAGGCGGGAACAGGCA | + |
Preference number: 1 (lower is better) Translates to: SRYCRMDAVRDKTTG*EGYCTTRNGRREQA Trigger: TGCCTGTTCCCGCCTGCCATTCCGGGTTGTGCAATAACCCTCCCAGCCGGTGGTCTTGTCCCTTACTGCATCCATCCTGCAATATCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CCA 90 bp | TTGAGGTTGCAAGTTTGGCCGGCTGGGGCAGGCCATCTCTGGACTTaGGAACAGCGTGTCTTGGGCGGGTTTGTAACTGCCTTTTGGTTT | + |
Preference number: 1 (lower is better) Translates to: LRLQVWPAGAGHLWT*EQRVLGGFVTAFWF Trigger: AAACCAAAAGGCAGTTACAAACCCGCCCAAGACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAACTTGCAACCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CCA 90 bp | CGAGCAGTAGCGGGGCGGACAGGGCTCACCACTGTGGCTGATTCTTaGAAACATGGCCCATTGTTTGCACAGGAACAAGAAACCCTGGAA | + |
Preference number: 1 (lower is better) Translates to: RAVAGRTGLTTVADS*KHGPLFAQEQETLE Trigger: TTCCAGGGTTTCTTGTTCCTGTGCAAACAATGGGCCATGTTTCCAAGAATCAGCCACAGTGGTGAGCCCTGTCCGCCCCGCTACTGCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR GCA 90 bp | CTAAAGTTCACCCTTAGGCTAGCCACATGCTGCTGCTGCTGCCGCTaGTGTGAACCAGTTAGGGACACAGGGCTAGGACTGACCAGAATA | + |
Preference number: 1 (lower is better) Translates to: LKFTLRLATCCCCCR*CEPVRDTGLGLTRI Trigger: TATTCTGGTCAGTCCTAGCCCTGTGTCCCTAACTGGTTCACAGCAGCGGCAGCAGCAGCAGCATGTGGCTAGCCTAAGGGTGAACTTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR GCA 90 bp | AGGACTGACCAGAATAGCAGAAAGCCTCCTTCCCTGGCTTTAGCCTaGTTCTTCTTCCCCAGGACCACCTCTGACCATAGGAGGAAGACA | + |
Preference number: 1 (lower is better) Translates to: RTDQNSRKPPSLALA*FFFPRTTSDHRRKT Trigger: TGTCTTCCTCCTATGGTCAGAGGTGGTCCTGGGGAAGAAGAAGCAGGCTAAAGCCAGGGAAGGAGGCTTTCTGCTATTCTGGTCAGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CCA 90 bp | GACCTTTTTCCCAACCCCCAAGCTTCCCTTATTAGACAGGAGGCATaGGTGTCTGCAGCTGGGTTACCTCACAAGCTTCCACAGCCAGAA | + |
Preference number: 1 (lower is better) Translates to: DLFPNPQASLIRQEA*VSAAGLPHKLPQPE Trigger: TTCTGGCTGTGGAAGCTTGTGAGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGGGTTGGGAAAAAGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR TCA 90 bp | TATGAAAGAAGAGAAAGACTAGAAGGTAGAGAGGAACTCCCCCTTTaGTGCCAAGGCTTCTGCTGGTGGAGACGAGCATGGGCAGGAGGG | + |
Preference number: 1 (lower is better) Translates to: YERRERLEGREELPL*CQGFCWWRRAWAGG Trigger: CCCTCCTGCCCATGCTCGTCTCCACCAGCAGAAGCCTTGGCATCAAAGGGGGAGTTCCTCTCTACCTTCTAGTCTTTCTCTTCTTTCATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR GCA 90 bp | ATACTGTCAACCCATGTCCCTTTCCCCTGGAGCTGTACTGAGGTATaGTGTCATTGGCTTTGTATGCCAGTCAGCCCTAGAGCCTTGGCA | + |
Preference number: 1 (lower is better) Translates to: ILSTHVPFPWSCTEV*CHWLCMPVSPRALA Trigger: TGCCAAGGCTCTAGGGCTGACTGGCATACAAAGCCAATGACAGCATACCTCAGTACAGCTCCAGGGGAAAGGGACATGGGTTGACAGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CCA 90 bp | TGGACTTGGGAACAGCGTGTCTTGGGCGGGTTTGTAACTGCCTTTTaGTTTGGTTTCAGATGCTGGTGGGTGGAGAATGGTCCAGATCGA | + |
Preference number: 1 (lower is better) Translates to: WTWEQRVLGGFVTAF*FGFRCWWVENGPDR Trigger: TCGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGACACGCTGTTCCCAAGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR TCA 90 bp | CCTGGAATGCCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTaGTCTTATCCCCAGACACTGACAATGTCCCGGTCTGAGGATGCT | + |
Preference number: 1 (lower is better) Translates to: PGMPLVMIVMSATPD*SYPQTLTMSRSEDA Trigger: AGCATCCTCAGACCGGGACATTGTCAGTGTCTGGGGATAAGATCAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGGCATTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR GCA 90 bp | CGTGTCTTGGGCGGGTTTGTAACTGCCTTTTGGTTTGGTTTCAGATaGTGGTGGGTGGAGAATGGTCCAGATCGACTCTTCTGTTTGTCG | + |
Preference number: 1 (lower is better) Translates to: RVLGGFVTAFWFGFR*WWVENGPDRLFCLS Trigger: CGACAAACAGAAGAGTCGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGACACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CCA 90 bp | TTGGGCGGGTTTGTAACTGCCTTTTGGTTTGGTTTCAGATGCTGGTaGGTGGAGAATGGTCCAGATCGACTCTTCTGTTTGTCGAGCCAC | + |
Preference number: 1 (lower is better) Translates to: LGGFVTAFWFGFRCW*VENGPDRLFCLSSH Trigger: GTGGCTCGACAAACAGAAGAGTCGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CCA 90 bp | GTCTTGGGCGGGTTTGTAACTGCCTTTTGGTTTGGTTTCAGATGCTaGTGGGTGGAGAATGGTCCAGATCGACTCTTCTGTTTGTCGAGC | + |
Preference number: 1 (lower is better) Translates to: VLGGFVTAFWFGFRC*WVENGPDRLFCLSS Trigger: GCTCGACAAACAGAAGAGTCGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CCA 90 bp | TTGGGAACAGCGTGTCTTGGGCGGGTTTGTAACTGCCTTTTGGTTTaGTTTCAGATGCTGGTGGGTGGAGAATGGTCCAGATCGACTCTT | + |
Preference number: 1 (lower is better) Translates to: LGTACLGRVCNCLLV*FQMLVGGEWSRSTL Trigger: AAGAGTCGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGACACGCTGTTCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CCA 90 bp | ACAAAGTCTTGGCTTTCCTATAACATCAATGCCAGAGAGGCTGGGTaGGTGAGAAAGCACCCCATAGTTCTCCCAAGCCTGCTAACAGCC | + |
Preference number: 1 (lower is better) Translates to: TKSWLSYNINAREAG*VRKHPIVLPSLLTA Trigger: GGCTGTTAGCAGGCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGATGTTATAGGAAAGCCAAGACTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR TCA 90 bp | GACTCTTCTGTTTGTCGAGCCACCTTTCTAGAAGAGGCAGATGTTTaGTGTGCTTTGCTCTTGTGGGACAAGTGGGAAGGCACATCCTCC | + |
Preference number: 1 (lower is better) Translates to: DSSVCRATFLEEADV*CALLLWDKWEGTSS Trigger: GGAGGATGTGCCTTCCCACTTGTCCCACAAGAGCAAAGCACATCAAACATCTGCCTCTTCTAGAAAGGTGGCTCGACAAACAGAAGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CCA 90 bp | GTGGCTTGGAAGGGAGCTCTTGCTGAAGACCCAGCTCCCTCTTTATaGGTAAACACTCAAGCTCTGGTCTCAGATATGGTGTCAAAGGAA | + |
Preference number: 1 (lower is better) Translates to: VAWKGALAEDPAPSL*VNTQALVSDMVSKE Trigger: TTCCTTTGACACCATATCTGAGACCAGAGCTTGAGTGTTTACCCATAAAGAGGGAGCTGGGTCTTCAGCAAGAGCTCCCTTCCAAGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR GCA 90 bp | TTCTGTTTGTCGAGCCACCTTTCTAGAAGAGGCAGATGTTTGATGTaGTTTGCTCTTGTGGGACAAGTGGGAAGGCACATCCTCCTTAGC | + |
Preference number: 1 (lower is better) Translates to: FCLSSHLSRRGRCLM*FALVGQVGRHILLS Trigger: GCTAAGGAGGATGTGCCTTCCCACTTGTCCCACAAGAGCAAAGCACATCAAACATCTGCCTCTTCTAGAAAGGTGGCTCGACAAACAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR GCA 90 bp | ACACTGTCTTTCTGGATTAAGTCACTATGTCCCCAAAGCGAAGGATaGGTAGAACCAGAATCCTACATCTTGACTGTCTGTCGGTCAGCA | + |
Preference number: 1 (lower is better) Translates to: TLSFWIKSLCPQSEG*VEPESYILTVCRSA Trigger: TGCTGACCGACAGACAGTCAAGATGTAGGATTCTGGTTCTACGCATCCTTCGCTTTGGGGACATAGTGACTTAATCCAGAAAGACAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CCA 90 bp | ATTCTTGGAAACATGGCCCATTGTTTGCACAGGAACAAGAAACCCTaGAATGCCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTG | + |
Preference number: 1 (lower is better) Translates to: ILGNMAHCLHRNKKP*NAFGDDSDVSDSRL Trigger: CAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGGCATTCCAGGGTTTCTTGTTCCTGTGCAAACAATGGGCCATGTTTCCAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR GCA 90 bp | AAGCTCACACACAAGAAGCCAAGGGGATCTCATCTCTATTCTGTATaGTCAACACATCCAGCATGTCTATGTGTAAGCTGGACACAGAGA | + |
Preference number: 1 (lower is better) Translates to: KLTHKKPRGSHLYSV*STHPACLCVSWTQR Trigger: TCTCTGTGTCCAGCTTACACATAGACATGCTGGATGTGTTGAGCATACAGAATAGAGATGAGATCCCCTTGGCTTCTTGTGTGTGAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CCA 90 bp | CATGCAACCAGAAGAGTAACCCTGAGGCATCCTGGTGTCAGGCTCTaGGTGTGCTCAACAAACAACATTAACAACTTTAAAAGAACACTC | + |
Preference number: 1 (lower is better) Translates to: HATRRVTLRHPGVRL*VCSTNNINNFKRTL Trigger: GAGTGTTCTTTTAAAGTTGTTAATGTTGTTTGTTGAGCACACCCAGAGCCTGACACCAGGATGCCTCAGGGTTACTCTTCTGGTTGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CCA 90 bp | TTCTGTAATTCTGGCAACAAGGTTTGTGCCAACTTCACAAAGTCTTaGCTTTCCTATAACATCAATGCCAGAGAGGCTGGGTGGGTGAGA | + |
Preference number: 1 (lower is better) Translates to: FCNSGNKVCANFTKS*LSYNINAREAGWVR Trigger: TCTCACCCACCCAGCCTCTCTGGCATTGATGTTATAGGAAAGCCAAGACTTTGTGAAGTTGGCACAAACCTTGTTGCCAGAATTACAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR TCA 90 bp | CTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACTGAAAAGTaGGGTTTAATCACACATGAATCTGTACCCCAAAGAATGCAGCAC | + |
Preference number: 1 (lower is better) Translates to: LRSSFKCVLNRVTEK*GLITHESVPQRMQH Trigger: GTGCTGCATTCTTTGGGGTACAGATTCATGTGTGATTAAACCTCACTTTTCAGTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR GCA 90 bp | ACAAAAGTTTCACAGAGGCCACTCGGCGTGACTTTTCTTCTCATCTaGAAAGCTTTGAAAGCAGATGTAATGGAGCTAACACTTGTATTA | + |
Preference number: 1 (lower is better) Translates to: TKVSQRPLGVTFLLI*KALKADVMELTLVL Trigger: TAATACAAGTGTTAGCTCCATTACATCTGCTTTCAAAGCTTTGCAGATGAGAAGAAAAGTCACGCCGAGTGGCCTCTGTGAAACTTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR TCA 90 bp | TTTGGCCGGCTGGGGCAGGCCATCTCTGGACTTGGGAACAGCGTGTCTTGGGCGCAGATTGGCAAGCCCTaGGACCCAAGGGCAGGGCTG | + |
Preference number: 2 (lower is better) Translates to: FGRLGQAISGLGNSVSWAQIGKP*DPRAGL Trigger: CAGCCCTGCCCTTGGGTCTCAGGGCTTGCCAATCTG...CGCCCAAGACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | CAGGGGGTTCTCGGTCCACCAGTCCTGCCACTGGCACCTACTGGAATTCCAGGGTCAGATGCTGGTGGGTaGAGAATGGTCCAGATCGAC | + |
Preference number: 2 (lower is better) Translates to: QGVLGPPVLPLAPTGIPGSDAGG*RMVQID Trigger: GTCGATCTGGACCATTCTCCACCCACCAGCATCTGA...CCCTGGAATTCCAGTAGGTGCCAGTGGCAGGACTGGTGGACCGAGAACCCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 90 bp | TGGCCGGCTGGGGCAGGCCATCTCTGGACTTGGGAACAGCGTGTCTaGGGCGGGTTTGTAACTGCCTTTTGGTTTGGTTTCAGATGCTGG | + |
Preference number: 2 (lower is better) Translates to: WPAGAGHLWTWEQRV*GGFVTAFWFGFRCW Trigger: CCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR GCA 90 bp | GTCCACATTTGCATTGTGAGTTGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTAGGCTGGCGAGCTGCTaGCCTTGGTCTCAGGCTTTT | + |
Preference number: 2 (lower is better) Translates to: VHICIVSCAGAPAPPLILRLASC*PWSQAF Trigger: AAAAGCCTGAGACCAAGGGCAGCAGCTCGCCAGCCT...AAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | GTCCACATTTGCATTGTGAGTTGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTGGGCGATGGAGTCCTTaGGGCTTCCTGTTTCTGCAG | + |
Preference number: 2 (lower is better) Translates to: VHICIVSCAGAPAPPLILGRWSP*GFLFLQ Trigger: CTGCAGAAACAGGAAGCCCCAAGGACTCCATCGCCC...AAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | GTAAGGGATGATGACGACCTCTCCTGTGGGTCCCCTCTCTCCAGATATTGCAGGGTTCCTGCAGTGAGCTaGCAAGGGCCTGCCAGCAAC | + |
Preference number: 2 (lower is better) Translates to: VRDDDDLSCGSPLSRYCRVPAVS*QGPASN Trigger: GTTGCTGGCAGGCCCTTGCCAGCTCACTGCAGGAAC...CCTGCAATATCTGGAGAGAGGGGACCCACAGGAGAGGTCGTCATCATCCCTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR TCA 90 bp | CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTGAGGAACTCCCCCTTTaGTGCCAAGGCTTCTGCTGG | + |
Preference number: 2 (lower is better) Translates to: PQASLIRQEAWVSAAGLPEELPL*CQGFCW Trigger: CCAGCAGAAGCCTTGGCATCAAAGGGGGAGTTCCTC...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR TCA 90 bp | GCGGAGTATGGCAGGTCCTTCACTAAGGGTGTGGTACTTTGGGGACAGGAGAGCTGTCCCCTCAGAGAGTaGAGGCAGGCTGCTTTCCAA | + |
Preference number: 2 (lower is better) Translates to: AEYGRSFTKGVVLWGQESCPLRE*RQAAFQ Trigger: TTGGAAAGCAGCCTGCCTTCACTCTCTGAGGGGACA...GCTCTCCTGTCCCCAAAGTACCACACCCTTAGTGAAGGACCTGCCATACTCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR TCA 90 bp | GCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACACTGATGGGGTAAGGTaGGCTTGGGAGCCACCGGCT | + |
Preference number: 2 (lower is better) Translates to: AGAPAPPLILQVCVKQSNTDGVR*AWEPPA Trigger: AGCCGGTGGCTCCCAAGCTCACCTTACCCCATCAGT...GTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR GCA 90 bp | GCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACGCCACATGCTGCTGCTaGTGCCGCTGCTGTGAACCA | + |
Preference number: 2 (lower is better) Translates to: AGAPAPPLILQVCVKQSNATCCC*CRCCEP Trigger: TGGTTCACAGCAGCGGCAGCAGCAGCAGCATGTGGC...GTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | ATCAATGCCAGAGAGGCTGGGTGGGTGAGAAAGCACCCCATAGTTCTCCCAAGCCAAGGCTTCTGCTGGTaGAGACGAGCATGGGCAGGA | + |
Preference number: 2 (lower is better) Translates to: INAREAGWVRKHPIVLPSQGFCW*RRAWAG Trigger: TCCTGCCCATGCTCGTCTCCACCAGCAGAAGCCTTG...GCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | GTAAGGGATGATGACGACCTCTCCTGTGGGTCCCCTCTCTCCAGATATTGCAGGCTAGGGGAGGCTCCTTaGCCAGAGGCTTCCAGATTG | + |
Preference number: 2 (lower is better) Translates to: VRDDDDLSCGSPLSRYCRLGEAP*PEASRL Trigger: CAATCTGGAAGCCTCTGGCCAAGGAGCCTCCCCTAG...CCTGCAATATCTGGAGAGAGGGGACCCACAGGAGAGGTCGTCATCATCCCTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTAACCCTGAGGCATCCTaGTGTCAGGCTCTGGGTGTG | + |
Preference number: 2 (lower is better) Translates to: PQASLIRQEAWVSAAGLPNPEAS*CQALGV Trigger: CACACCCAGAGCCTGACACCAGGATGCCTCAGGGTT...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | GGTGGAAGAGCAGCTCACTGTTCTGACTCACTGCCTGTCGGTCCATGCCGCACCCTCTGGTCTCAGATATaGTGTCAAAGGAAGGCCAGG | + |
Preference number: 2 (lower is better) Translates to: GGRAAHCSDSLPVGPCRTLWSQI*CQRKAR Trigger: CCTGGCCTTCCTTTGACACCATATCTGAGACCAGAG...GGTGCGGCATGGACCGACAGGCAGTGAGTCAGAACAGTGAGCTGCTCTTCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | ATCAATGCCAGAGAGGCTGGGTGGGTGAGAAAGCACCCCATAGTTCTCCCAAGCGAGGGACAGGACCCCTaGATCCAAGACAGCTGCTCT | + |
Preference number: 2 (lower is better) Translates to: INAREAGWVRKHPIVLPSEGQDP*IQDSCS Trigger: AGAGCAGCTGTCTTGGATCCAGGGGTCCTGTCCCTC...GCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR TCA 90 bp | GCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACAAGATAGGACAGAGGTaGGGCCATCTGGCGGCTCAG | + |
Preference number: 2 (lower is better) Translates to: AGAPAPPLILQVCVKQSNKIGQR*GHLAAQ Trigger: CTGAGCCGCCAGATGGCCTCACCTCTGTCCTATCTT...GTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR TCA 90 bp | CAGGGGGTTCTCGGTCCACCAGTCCTGCCACTGGCACCTACTGGAATTCCAGGGGCTTTCCAATTCAAATaGCACACTGGAAGCTCTCTG | + |
Preference number: 2 (lower is better) Translates to: QGVLGPPVLPLAPTGIPGAFQFK*HTGSSL Trigger: CAGAGAGCTTCCAGTGTGTCATTTGAATTGGAAAGC...CCCTGGAATTCCAGTAGGTGCCAGTGGCAGGACTGGTGGACCGAGAACCCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR TCA 90 bp | GTCCACATTTGCATTGTGAGTTGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTGTGGGCTACACTGGCTaGAAGGTGCCAGATCAATTC | + |
Preference number: 2 (lower is better) Translates to: VHICIVSCAGAPAPPLILVGYTG*KVPDQF Trigger: GAATTGATCTGGCACCTTTCAGCCAGTGTAGCCCAC...AAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR GCA 90 bp | CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTTCCCTGGCTTTAGCCTaGTTCTTCTTCCCCAGGACC | + |
Preference number: 2 (lower is better) Translates to: PQASLIRQEAWVSAAGLPSLALA*FFFPRT Trigger: GGTCCTGGGGAAGAAGAAGCAGGCTAAAGCCAGGGA...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR TCA 90 bp | GTCCACATTTGCATTGTGAGTTGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTAGGAAGAAAGGAGGATaGGAAGCAGCCATGAGAGAG | + |
Preference number: 2 (lower is better) Translates to: VHICIVSCAGAPAPPLILRKKGG*EAAMRE Trigger: CTCTCTCATGGCTGCTTCTCATCCTCCTTTCTTCCT...AAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR TCA 90 bp | CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTACGAAGTTCCTGCAGTaGGCTGGCAAGGGCCTGCCA | + |
Preference number: 2 (lower is better) Translates to: LTLVLKGRERARSRCQHPTKFLQ*AGKGLP Trigger: TGGCAGGCCCTTGCCAGCTCACTGCAGGAACTTCGT...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR TCA 90 bp | GTAAGGGATGATGACGACCTCTCCTGTGGGTCCCCTCTCTCCAGATATTGCAGGAGAGGCCACTCGGCGTaGCTTTTCTTCTCATCTGCA | + |
Preference number: 2 (lower is better) Translates to: VRDDDDLSCGSPLSRYCRRGHSA*LFFSSA Trigger: TGCAGATGAGAAGAAAAGTCACGCCGAGTGGCCTCT...CCTGCAATATCTGGAGAGAGGGGACCCACAGGAGAGGTCGTCATCATCCCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTGTGGAGAGACTGAGCTaGGGCCAGGGCTTCCTCATC | + |
Preference number: 2 (lower is better) Translates to: LTLVLKGRERARSRCQHPVERLS*GQGFLI Trigger: GATGAGGAAGCCCTGGCCCCAGCTCAGTCTCTCCAC...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | ATCAATGCCAGAGAGGCTGGGTGGGTGAGAAAGCACCCCATAGTTCTCCCAAGCGCCAGATCAATTCTTTaGGGATGCCCAGAGAAGGGC | + |
Preference number: 2 (lower is better) Translates to: INAREAGWVRKHPIVLPSARSIL*GCPEKG Trigger: GCCCTTCTCTGGGCATCCCCAAAGAATTGATCTGGC...GCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTCATGTCCCTTTCCCCTaGAGCTGTACTGAGGTATGC | + |
Preference number: 2 (lower is better) Translates to: PQASLIRQEAWVSAAGLPHVPFP*SCTEVC Trigger: GCATACCTCAGTACAGCTCCAGGGGAAAGGGACATG...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 90 bp | CTGGACTTGGGAACAGCGTGTCTTGGGCGGGTTTGTAACTGCCTTTaGGTTTGGTTTCAGATGCTGGTGGGTGGAGAATGGTCCAGATCG | + |
Preference number: 2 (lower is better) Translates to: LDLGTACLGRVCNCL*VWFQMLVGGEWSRS Trigger: CGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGACACGCTGTTCCCAAGTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR TCA 90 bp | GCGGAGTATGGCAGGTCCTTCACTAAGGGTGTGGTACTTTGGGGACAGGAGAGCGAAGAGGCAGATGTTTaGTGTGCTTTGCTCTTGTGG | + |
Preference number: 2 (lower is better) Translates to: AEYGRSFTKGVVLWGQESEEADV*CALLLW Trigger: CCACAAGAGCAAAGCACATCAAACATCTGCCTCTTC...GCTCTCCTGTCCCCAAAGTACCACACCCTTAGTGAAGGACCTGCCATACTCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR TCA 90 bp | GTCCACATTTGCATTGTGAGTTGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTAAAGACAAATGCAAATaGAGGCCTTCCCTCGCTGCA | + |
Preference number: 2 (lower is better) Translates to: VHICIVSCAGAPAPPLILKDKCK*RPSLAA Trigger: TGCAGCGAGGGAAGGCCTTCATTTGCATTTGTCTTT...AAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR GCA 90 bp | CATGCAACCAGAAGAGTAACCCTGAGGCATCCTGGTGTCAGGCTCTGGGTGTGCTGGTTTGGTTTCAGATaGTGGTGGGTGGAGAATGGT | + |
Preference number: 2 (lower is better) Translates to: HATRRVTLRHPGVRLWVCWFGFR*WWVENG Trigger: ACCATTCTCCACCCACCAGCATCTGAAACCAAACCA...GCACACCCAGAGCCTGACACCAGGATGCCTCAGGGTTACTCTTCTGGTTGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR GCA 90 bp | GTAAGGGATGATGACGACCTCTCCTGTGGGTCCCCTCTCTCCAGATATTGCAGGGTCATTGGCTTTGTATaGCAGTCAGCCCTAGAGCCT | + |
Preference number: 2 (lower is better) Translates to: VRDDDDLSCGSPLSRYCRVIGFV*QSALEP Trigger: AGGCTCTAGGGCTGACTGGCATACAAAGCCAATGAC...CCTGCAATATCTGGAGAGAGGGGACCCACAGGAGAGGTCGTCATCATCCCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | GAGAGTGAAGGCAGGCTGCTTTCCAATTCAAATGACACACTGGAAGCTCTCTGGTGCCAAGGCTTCTGCTaGTGGAGACGAGCATGGGCA | + |
Preference number: 2 (lower is better) Translates to: ESEGRLLSNSNDTLEALWCQGFC*WRRAWA Trigger: TGCCCATGCTCGTCTCCACCAGCAGAAGCCTTGGCA...CCAGAGAGCTTCCAGTGTGTCATTTGAATTGGAAAGCAGCCTGCCTTCACTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR GCA 90 bp | CATGCAACCAGAAGAGTAACCCTGAGGCATCCTGGTGTCAGGCTCTGGGTGTGCAGACAATCAGGAGAATaGAGGCCTCTGAGAAAACTC | + |
Preference number: 2 (lower is better) Translates to: HATRRVTLRHPGVRLWVCRQSGE*RPLRKL Trigger: GAGTTTTCTCAGAGGCCTGCATTCTCCTGATTGTCT...GCACACCCAGAGCCTGACACCAGGATGCCTCAGGGTTACTCTTCTGGTTGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR GCA 90 bp | CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTACATGCTGCTGCTGCTaGCGCTGCTGTGAACCAGTT | + |
Preference number: 2 (lower is better) Translates to: LTLVLKGRERARSRCQHPTCCCC*RCCEPV Trigger: AACTGGTTCACAGCAGCGGCAGCAGCAGCAGCATGT...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | TGCTCTTTATACCCCTGTTCCTCCAAGACCTTCACATGTCTCATGCTTGTCACATGGTGGAGACGAGCATaGGCAGGAGGGTGGAGAGAC | + |
Preference number: 2 (lower is better) Translates to: CSLYPCSSKTFTCLMLVTWWRRA*AGGWRD Trigger: GTCTCTCCACCCTCCTGCCCATGCTCGTCTCCACCA...TGTGACAAGCATGAGACATGTGAAGGTCTTGGAGGAACAGGGGTATAAAGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR GCA 90 bp | ATCAATGCCAGAGAGGCTGGGTGGGTGAGAAAGCACCCCATAGTTCTCCCAAGCGGCAGATGTTTGATGTaGTTTGCTCTTGTGGGACAA | + |
Preference number: 2 (lower is better) Translates to: INAREAGWVRKHPIVLPSGRCLM*FALVGQ Trigger: TTGTCCCACAAGAGCAAAGCACATCAAACATCTGCC...GCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTAACTGCCTTTTGGTTTaGTTTCAGATGCTGGTGGGT | + |
Preference number: 2 (lower is better) Translates to: PQASLIRQEAWVSAAGLPNCLLV*FQMLVG Trigger: ACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTT...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | ATCAATGCCAGAGAGGCTGGGTGGGTGAGAAAGCACCCCATAGTTCTCCCAAGCTGCCACGTTGGTGTTTaGAACCAAATTCCTCAGTTG | + |
Preference number: 2 (lower is better) Translates to: INAREAGWVRKHPIVLPSCHVGV*NQIPQL Trigger: CAACTGAGGAATTTGGTTCCAAACACCAACGTGGCA...GCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | GGTGGAAGAGCAGCTCACTGTTCTGACTCACTGCCTGTCGGTCCATGCCGCACCTGTCTATGTGTAAGCTaGACACAGAGAAAAAGAATG | + |
Preference number: 2 (lower is better) Translates to: GGRAAHCSDSLPVGPCRTCLCVS*TQRKRM Trigger: CATTCTTTTTCTCTGTGTCCAGCTTACACATAGACA...GGTGCGGCATGGACCGACAGGCAGTGAGTCAGAACAGTGAGCTGCTCTTCCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTAAGGGTGTGGTACTTTaGGGACAGGAGAGCCTGCAT | + |
Preference number: 2 (lower is better) Translates to: LTLVLKGRERARSRCQHPKGVVL*GQESLH Trigger: ATGCAGGCTCTCCTGTCCCCAAAGTACCACACCCTT...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | GGTGGAAGAGCAGCTCACTGTTCTGACTCACTGCCTGTCGGTCCATGCCGCACCTTCTTTGAGGATGTGTaGAATCTAAGTGAGCTTTGT | + |
Preference number: 2 (lower is better) Translates to: GGRAAHCSDSLPVGPCRTFFEDV*NLSELC Trigger: ACAAAGCTCACTTAGATTCCACACATCCTCAAAGAA...GGTGCGGCATGGACCGACAGGCAGTGAGTCAGAACAGTGAGCTGCTCTTCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 90 bp | CGACTCTTCTGTTTGTCGAGCCACCTTTCTAGAAGAGGCAGATGTTaGATGTGCTTTGCTCTTGTGGGACAAGTGGGAAGGCACATCCTC | + |
Preference number: 2 (lower is better) Translates to: RLFCLSSHLSRRGRC*MCFALVGQVGRHIL Trigger: GAGGATGTGCCTTCCCACTTGTCCCACAAGAGCAAAGCACATCAAACATCTGCCTCTTCTAGAAAGGTGGCTCGACAAACAGAAGAGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR TCA 90 bp | AATGCCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTGATCTTATCCCCAAACCTGGGGTGGGAATaGGGAAACTGGAAGAGCAGG | + |
Preference number: 2 (lower is better) Translates to: NAFGDDSDVSDSRLILSPNLGWE*GNWKSR Trigger: CCTGCTCTTCCAGTTTCCTCATTCCCACCCCAGGTT...TGGGGATAAGATCAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR GCA 90 bp | CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTTCAATTCTTTGGGGATaGCCAGAGAAGGGCCAGGAA | + |
Preference number: 2 (lower is better) Translates to: LTLVLKGRERARSRCQHPSILWG*PEKGQE Trigger: TTCCTGGCCCTTCTCTGGGCATCCCCAAAGAATTGA...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTGGTTTCAGATGCTGGTaGGTGGAGAATGGTCCAGAT | + |
Preference number: 2 (lower is better) Translates to: LTLVLKGRERARSRCQHPGFRCW*VENGPD Trigger: ATCTGGACCATTCTCCACCCACCAGCATCTGAAACC...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | AATGCCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTGATCTTATCCCCACACCAGTCCTGCCACTaGCACCTACTGGAATTCCAG | + |
Preference number: 2 (lower is better) Translates to: NAFGDDSDVSDSRLILSPHQSCH*HLLEFQ Trigger: CTGGAATTCCAGTAGGTGCCAGTGGCAGGACTGGTG...TGGGGATAAGATCAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | AATGCCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTGATCTTATCCCCAGACAAGACCACCGGCTaGGAGGGTTATTGCACAACC | + |
Preference number: 2 (lower is better) Translates to: NAFGDDSDVSDSRLILSPDKTTG*EGYCTT Trigger: GGTTGTGCAATAACCCTCCCAGCCGGTGGTCTTGTC...TGGGGATAAGATCAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 90 bp | GCTAATGTAGAAAAACAGTCAAAGTGTCCACATTTGCATTGTGAGTaGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGT | + |
Preference number: 2 (lower is better) Translates to: ANVEKQSKCPHLHCE*RRGTSSSAHPSSVC Trigger: ACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGACACTTTGACTGTTTTTCTACATTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | ATCAATGCCAGAGAGGCTGGGTGGGTGAGAAAGCACCCCATAGTTCTCCCAAGCTTTGTAACTGCCTTTTaGTTTGGTTTCAGATGCTGG | + |
Preference number: 2 (lower is better) Translates to: INAREAGWVRKHPIVLPSFVTAF*FGFRCW Trigger: CCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAA...GCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | GCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACACTGTGGCTGATTCTTaGAAACATGGCCCATTGTTT | + |
Preference number: 2 (lower is better) Translates to: AGAPAPPLILQVCVKQSNTVADS*KHGPLF Trigger: AAACAATGGGCCATGTTTCCAAGAATCAGCCACAGT...GTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 90 bp | TTCAGATGCTGGTGGGTGGAGAATGGTCCAGATCGACTCTTCTGTTaGTCGAGCCACCTTTCTAGAAGAGGCAGATGTTTGATGTGCTTT | + |
Preference number: 2 (lower is better) Translates to: FRCWWVENGPDRLFC*SSHLSRRGRCLMCF Trigger: AAAGCACATCAAACATCTGCCTCTTCTAGAAAGGTGGCTCGACAAACAGAAGAGTCGATCTGGACCATTCTCCACCCACCAGCATCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 90 bp | AAACAACGTAAAGATCTCGAAGACGTCACAACACATTCTGTAAGATaGCCACAGAAACCCACGCAGGGCCGTGCGAATGACAGCAATAGG | + |
Preference number: 2 (lower is better) Translates to: KQRKDLEDVTTHSVR*PQKPTQGRANDSNR Trigger: CCTATTGCTGTCATTCGCACGGCCCTGCGTGGGTTTCTGTGGCAATCTTACAGAATGTGTTGTGACGTCTTCGAGATCTTTACGTTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR GCA 90 bp | CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTATGTTTGATGTGCTTTaGTCTTGTGGGACAAGTGGG | + |
Preference number: 2 (lower is better) Translates to: LTLVLKGRERARSRCQHPMFDVL*SCGTSG Trigger: CCCACTTGTCCCACAAGAGCAAAGCACATCAAACAT...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTTTAACACTGTCTTTCTaGATTAAGTCACTATGTCCC | + |
Preference number: 2 (lower is better) Translates to: PQASLIRQEAWVSAAGLPLTLSF*IKSLCP Trigger: GGGACATAGTGACTTAATCCAGAAAGACAGTGTTAA...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR GCA 90 bp | CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTTGGCAACAAGGTTTGTaGCAACTTCACAAAGTCTTG | + |
Preference number: 2 (lower is better) Translates to: LTLVLKGRERARSRCQHPWQQGL*QLHKVL Trigger: CAAGACTTTGTGAAGTTGGCACAAACCTTGTTGCCA...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CCA 90 bp | GTGGAACTTAGTTTCTGTAATTCTGGCAACAAGGTTTGTGCCAACTTCACAAAGGCGAGCTGCTGCCCTTaGTCTCAGGCTTTTCTGGAA | + |
Preference number: 2 (lower is better) Translates to: VELSFCNSGNKVCANFTKASCCP*SQAFLE Trigger: TTCCAGAAAAGCCTGAGACCAAGGGCAGCAGCTCGC...CTTTGTGAAGTTGGCACAAACCTTGTTGCCAGAATTACAGAAACTAAGTTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR GCA 90 bp | CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTCATCTCTATTCTGTATaGTCAACACATCCAGCATGT | + |
Preference number: 2 (lower is better) Translates to: LTLVLKGRERARSRCQHPHLYSV*STHPAC Trigger: ACATGCTGGATGTGTTGAGCATACAGAATAGAGATG...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR GCA 90 bp | GTGGAACTTAGTTTCTGTAATTCTGGCAACAAGGTTTGTGCCAACTTCACAAAGGGGCGGGTTTGTAACTaGCTTTTGGTTTGGTTTCAG | + |
Preference number: 2 (lower is better) Translates to: VELSFCNSGNKVCANFTKGRVCN*LLVWFQ Trigger: CTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCC...CTTTGTGAAGTTGGCACAAACCTTGTTGCCAGAATTACAGAAACTAAGTTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 90 bp | CATCTGGCGGCTCAGGGGAGCAAGAGTATAAGATTTTTGGCTTTATaGAGAATGGTTTATGAAAGAAGAGAAAGACTAGAAGGTAGAGAG | + |
Preference number: 2 (lower is better) Translates to: HLAAQGSKSIRFLAL*RMVYERRERLEGRE Trigger: CTCTCTACCTTCTAGTCTTTCTCTTCTTTCATAAACCATTCTCAATAAAGCCAAAAATCTTATACTCTTGCTCCCCTGAGCCGCCAGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR TCA 72 bp | GGACGCCGAGGGAGGTGGAAGAGCAGCTCACTGTTCTaGCTCACTGCCTGTCGGTCCATGCCGCACCAGAAC | + |
Preference number: 3 (lower is better) Translates to: GRRGRWKSSSLF*LTACRSMPHQN Trigger: GTTCTGGTGCGGCATGGACCGACAGGCAGTGAGTCAGAACAGTGAGCTGCTCTTCCACCTCCCTCGGCGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR GCA 72 bp | GCAGTAAGGGACAAGACCACCGGCTGGGAGGGTTATTaGACAACCCGGAATGGCAGGCGGGAACAGGCAGGC | + |
Preference number: 3 (lower is better) Translates to: AVRDKTTGWEGY*TTRNGRREQAG Trigger: GCCTGCCTGTTCCCGCCTGCCATTCCGGGTTGTGCAATAACCCTCCCAGCCGGTGGTCTTGTCCCTTACTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR-3UTR CAA 90 bp | GGTGGCCAAAGGAACACATGGCGGGCGATGGAGTCCTTGGGGCTTCCTGTTTCTGTTGAGGTTGCAAGTTaGGCCGGCTGGGGCAGGCCA | + |
Preference number: 3 (lower is better) Translates to: GGQRNTWRAMESLGLPVSVEVAS*AGWGRP Trigger: TGGCCTGCCCCAGCCGGCCAAACTTGCAACCTCAAC...AGAAACAGGAAGCCCCAAGGACTCCATCGCCCGCCATGTGTTCCTTTGGCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CCA 72 bp | CAAGTTTGGCCGGCTGGGGCAGGCCATCTCTGGACTTaGGAACAGCGTGTCTTGGGCGGGTTTGTAACTGCC | + |
Preference number: 3 (lower is better) Translates to: QVWPAGAGHLWT*EQRVLGGFVTA Trigger: GGCAGTTACAAACCCGCCCAAGACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR GCA 72 bp | ACCCTTAGGCTAGCCACATGCTGCTGCTGCTGCCGCTaGTGTGAACCAGTTAGGGACACAGGGCTAGGACTG | + |
Preference number: 3 (lower is better) Translates to: TLRLATCCCCCR*CEPVRDTGLGL Trigger: CAGTCCTAGCCCTGTGTCCCTAACTGGTTCACAGCAGCGGCAGCAGCAGCAGCATGTGGCTAGCCTAAGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR TCA 72 bp | AAGCCTGGCATTGATGTTCTCCCTAGCATCCTGTTCTaGGGGAAGAGGCTGCACTCAGGACGCCGAGGGAGG | + |
Preference number: 3 (lower is better) Translates to: KPGIDVLPSILF*GKRLHSGRRGR Trigger: CCTCCCTCGGCGTCCTGAGTGCAGCCTCTTCCCTCAGAACAGGATGCTAGGGAGAACATCAATGCCAGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR GCA 72 bp | ATGTTCTCCCTAGCATCCTGTTCTGAGGGAAGAGGCTaGACTCAGGACGCCGAGGGAGGTGGAAGAGCAGCT | + |
Preference number: 3 (lower is better) Translates to: MFSLASCSEGRG*TQDAEGGGRAA Trigger: AGCTGCTCTTCCACCTCCCTCGGCGTCCTGAGTGCAGCCTCTTCCCTCAGAACAGGATGCTAGGGAGAACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR GCA 72 bp | CTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTaGCAGCATCCTCCTCACGCTCACCACGGGCTGGAG | + |
Preference number: 3 (lower is better) Translates to: LVLKGRERARSR*QHPPHAHHGLE Trigger: CTCCAGCCCGTGGTGAGCGTGAGGAGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR GCA 72 bp | GACGACCTCTCCTGTGGGTCCCCTCTCTCCAGATATTaGAGGATGGATGCAGTAAGGGACAAGACCACCGGC | + |
Preference number: 3 (lower is better) Translates to: DDLSCGSPLSRY*RMDAVRDKTTG Trigger: GCCGGTGGTCTTGTCCCTTACTGCATCCATCCTGCAATATCTGGAGAGAGGGGACCCACAGGAGAGGTCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR-3UTR CAA 90 bp | CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTTCTAGGGGAGGCTCCTaGGCCAGAGGCTTCCAGATT | + |
Preference number: 3 (lower is better) Translates to: PQASLIRQEAWVSAAGLPSRGGS*ARGFQI Trigger: AATCTGGAAGCCTCTGGCCAAGGAGCCTCCCCTAGA...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR-3UTR CAA 90 bp | ATCAATGCCAGAGAGGCTGGGTGGGTGAGAAAGCACCCCATAGTTCTCCCAAGCCTTGGAAGGGAGCTCTaGCTGAAGACCCAGCTCCCT | + |
Preference number: 3 (lower is better) Translates to: INAREAGWVRKHPIVLPSLGREL*LKTQLP Trigger: AGGGAGCTGGGTCTTCAGCAAGAGCTCCCTTCCAAG...GCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR TCA 72 bp | CCCAAGCCTGAGGAGCTTGTAGAAGTAACTGTCCCCTaGGTCACCACACCTCTGGGGAGGGCAACTAGCAAC | + |
Preference number: 3 (lower is better) Translates to: PKPEELVEVTVP*VTTPLGRATSN Trigger: GTTGCTAGTTGCCCTCCCCAGAGGTGTGGTGACTCAGGGGACAGTTACTTCTACAAGCTCCTCAGGCTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR GCA 72 bp | AAGTTCACCCTTAGGCTAGCCACATGCTGCTGCTGCTaGCGCTGCTGTGAACCAGTTAGGGACACAGGGCTA | + |
Preference number: 3 (lower is better) Translates to: KFTLRLATCCCC*RCCEPVRDTGL Trigger: TAGCCCTGTGTCCCTAACTGGTTCACAGCAGCGGCAGCAGCAGCAGCATGTGGCTAGCCTAAGGGTGAACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR GCA 72 bp | CTAAAGTTCACCCTTAGGCTAGCCACATGCTGCTGCTaGTGCCGCTGCTGTGAACCAGTTAGGGACACAGGG | + |
Preference number: 3 (lower is better) Translates to: LKFTLRLATCCC*CRCCEPVRDTG Trigger: CCCTGTGTCCCTAACTGGTTCACAGCAGCGGCAGCAGCAGCAGCATGTGGCTAGCCTAAGGGTGAACTTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR GCA 72 bp | GCAGCTCACTGTTCTGACTCACTGCCTGTCGGTCCATaGCGCACCAGAACAGAGCCAGAGAGAAGAATGTGC | + |
Preference number: 3 (lower is better) Translates to: AAHCSDSLPVGP*RTRTEPERRMC Trigger: GCACATTCTTCTCTCTGGCTCTGTTCTGGTGCGGCATGGACCGACAGGCAGTGAGTCAGAACAGTGAGCTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | CAGAGAGATGAAGTTGAGGTTGCAAGTTTGGCCGGCTaGGGCAGGCCATCTCTGGACTTGGGAACAGCGTGT | + |
Preference number: 3 (lower is better) Translates to: QRDEVEVASLAG*GRPSLDLGTAC Trigger: ACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAACTTGCAACCTCAACTTCATCTCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | AGAGGGAAGGTGGCCAAAGGAACACATGGCGGGCGATaGAGTCCTTGGGGCTTCCTGTTTCTGCAGAGAGAT | + |
Preference number: 3 (lower is better) Translates to: RGKVAKGTHGGR*SPWGFLFLQRD Trigger: ATCTCTCTGCAGAAACAGGAAGCCCCAAGGACTCCATCGCCCGCCATGTGTTCCTTTGGCCACCTTCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR GCA 72 bp | CCTCCAGAGGGACAGGACCCCTGGATCCAAGACAGCTaGTCTTTATACCCCTGTTCCTCCAAGACCTTCACA | + |
Preference number: 3 (lower is better) Translates to: PPEGQDPWIQDS*SLYPCSSKTFT Trigger: TGTGAAGGTCTTGGAGGAACAGGGGTATAAAGAGCAGCTGTCTTGGATCCAGGGGTCCTGTCCCTCTGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR GCA 72 bp | AGCCTGCTAACAGCCCAGAAGTCAAGGCTGGCGAGCTaGTGCCCTTGGTCTCAGGCTTTTCTGGAAATGAAC | + |
Preference number: 3 (lower is better) Translates to: SLLTAQKSRLAS*CPWSQAFLEMN Trigger: GTTCATTTCCAGAAAAGCCTGAGACCAAGGGCAGCAGCTCGCCAGCCTTGACTTCTGGGCTGTTAGCAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | GTGGCCAAAGGAACACATGGCGGGCGATGGAGTCCTTaGGGCTTCCTGTTTCTGCAGAGAGATGAAGTTGAG | + |
Preference number: 3 (lower is better) Translates to: VAKGTHGGRWSP*GFLFLQRDEVE Trigger: CTCAACTTCATCTCTCTGCAGAAACAGGAAGCCCCAAGGACTCCATCGCCCGCCATGTGTTCCTTTGGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | ACAGCCCAGAAGTCAAGGCTGGCGAGCTGCTGCCCTTaGTCTCAGGCTTTTCTGGAAATGAACACCCCAAAC | + |
Preference number: 3 (lower is better) Translates to: TAQKSRLASCCP*SQAFLEMNTPN Trigger: GTTTGGGGTGTTCATTTCCAGAAAAGCCTGAGACCAAGGGCAGCAGCTCGCCAGCCTTGACTTCTGGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | CCCAACCCCCAAGCTTCCCTTATTAGACAGGAGGCATaGGTGTCTGCAGCTGGGTTACCTCACAAGCTTCCA | + |
Preference number: 3 (lower is better) Translates to: PNPQASLIRQEA*VSAAGLPHKLP Trigger: TGGAAGCTTGTGAGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGGGTTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | GCGGGGCGGACAGGGCTCACCACTGTGGCTGATTCTTaGAAACATGGCCCATTGTTTGCACAGGAACAAGAA | + |
Preference number: 3 (lower is better) Translates to: AGRTGLTTVADS*KHGPLFAQEQE Trigger: TTCTTGTTCCTGTGCAAACAATGGGCCATGTTTCCAAGAATCAGCCACAGTGGTGAGCCCTGTCCGCCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR-3UTR CAA 90 bp | GCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACGGAATTCCAGGGATGTaGAGAGACAGGCAGTGGCTG | + |
Preference number: 3 (lower is better) Translates to: AGAPAPPLILQVCVKQSNGIPGM*RDRQWL Trigger: CAGCCACTGCCTGTCTCTCAACATCCCTGGAATTCC...GTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR TCA 72 bp | TGCAGGCCTCTGAGAAAACTCAAGATAGGACAGAGGTaGGGCCATCTGGCGGCTCAGGGGAGCAAGAGTATA | + |
Preference number: 3 (lower is better) Translates to: CRPLRKLKIGQR*GHLAAQGSKSI Trigger: TATACTCTTGCTCCCCTGAGCCGCCAGATGGCCTCACCTCTGTCCTATCTTGAGTTTTCTCAGAGGCCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR GCA 72 bp | GTCACAGACTCCTGTGGACATGGCTGTGTCAGCTCATaGAACCAGAAGAGTAACCCTGAGGCATCCTGGTGT | + |
Preference number: 3 (lower is better) Translates to: VTDSCGHGCVSS*NQKSNPEASWC Trigger: ACACCAGGATGCCTCAGGGTTACTCTTCTGGTTGCATGAGCTGACACAGCCATGTCCACAGGAGTCTGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR GCA 72 bp | CAGAATAGCAGAAAGCCTCCTTCCCTGGCTTTAGCCTaGTTCTTCTTCCCCAGGACCACCTCTGACCATAGG | + |
Preference number: 3 (lower is better) Translates to: QNSRKPPSLALA*FFFPRTTSDHR Trigger: CCTATGGTCAGAGGTGGTCCTGGGGAAGAAGAAGCAGGCTAAAGCCAGGGAAGGAGGCTTTCTGCTATTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | TGTTTCTGCAGAGAGATGAAGTTGAGGTTGCAAGTTTaGCCGGCTGGGGCAGGCCATCTCTGGACTTGGGAA | + |
Preference number: 3 (lower is better) Translates to: CFCREMKLRLQV*PAGAGHLWTWE Trigger: TTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAACTTGCAACCTCAACTTCATCTCTCTGCAGAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | AAAGAACACCGAAGGGAAGGGGGTCACAGACTCCTGTaGACATGGCTGTGTCAGCTCATGCAACCAGAAGAG | + |
Preference number: 3 (lower is better) Translates to: KEHRREGGHRLL*TWLCQLMQPEE Trigger: CTCTTCTGGTTGCATGAGCTGACACAGCCATGTCCACAGGAGTCTGTGACCCCCTTCCCTTCGGTGTTCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | CCTTTCCCCTGGAGCTGTACTGAGGTATGCTGTCATTaGCTTTGTATGCCAGTCAGCCCTAGAGCCTTGGCA | + |
Preference number: 3 (lower is better) Translates to: PFPWSCTEVCCH*LCMPVSPRALA Trigger: TGCCAAGGCTCTAGGGCTGACTGGCATACAAAGCCAATGACAGCATACCTCAGTACAGCTCCAGGGGAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR TCA 72 bp | AGAGAAAGACTAGAAGGTAGAGAGGAACTCCCCCTTTaGTGCCAAGGCTTCTGCTGGTGGAGACGAGCATGG | + |
Preference number: 3 (lower is better) Translates to: RERLEGREELPL*CQGFCWWRRAW Trigger: CCATGCTCGTCTCCACCAGCAGAAGCCTTGGCATCAAAGGGGGAGTTCCTCTCTACCTTCTAGTCTTTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR GCA 72 bp | GACTTGGGAACAGCGTGTCTTGGGCGGGTTTGTAACTaGCTTTTGGTTTGGTTTCAGATGCTGGTGGGTGGA | + |
Preference number: 3 (lower is better) Translates to: DLGTACLGRVCN*LLVWFQMLVGG Trigger: TCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGACACGCTGTTCCCAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR GCA 72 bp | CCATGCCGCACCAGAACAGAGCCAGAGAGAAGAATGTaGTGTAGACACAGAGGCCCTCAAGCAGAGAAAGTT | + |
Preference number: 3 (lower is better) Translates to: PCRTRTEPERRM*CRHRGPQAEKV Trigger: AACTTTCTCTGCTTGAGGGCCTCTGTGTCTACAGCACATTCTTCTCTCTGGCTCTGTTCTGGTGCGGCATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR-3UTR CAA 90 bp | CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTTGCCAGATCAATTCTTaGGGGATGCCCAGAGAAGGG | + |
Preference number: 3 (lower is better) Translates to: LTLVLKGRERARSRCQHPCQINS*GMPREG Trigger: CCCTTCTCTGGGCATCCCCAAAGAATTGATCTGGCA...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR TCA 72 bp | TGTAGAAAAACAGTCAAAGTGTCCACATTTGCATTGTaGGTTGCGCAGGGGCACCAGCTCCTCCGCTCATCC | + |
Preference number: 3 (lower is better) Translates to: CRKTVKVSTFAL*VAQGHQLLRSS Trigger: GGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGACACTTTGACTGTTTTTCTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR GCA 72 bp | GGCGGGTTTGTAACTGCCTTTTGGTTTGGTTTCAGATaGTGGTGGGTGGAGAATGGTCCAGATCGACTCTTC | + |
Preference number: 3 (lower is better) Translates to: GGFVTAFWFGFR*WWVENGPDRLF Trigger: GAAGAGTCGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | GAACAGCGTGTCTTGGGCGGGTTTGTAACTGCCTTTTaGTTTGGTTTCAGATGCTGGTGGGTGGAGAATGGT | + |
Preference number: 3 (lower is better) Translates to: EQRVLGGFVTAF*FGFRCWWVENG Trigger: ACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGACACGCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | AGCTCATGCAACCAGAAGAGTAACCCTGAGGCATCCTaGTGTCAGGCTCTGGGTGTGCTCAACAAACAACAT | + |
Preference number: 3 (lower is better) Translates to: SSCNQKSNPEAS*CQALGVLNKQH Trigger: ATGTTGTTTGTTGAGCACACCCAGAGCCTGACACCAGGATGCCTCAGGGTTACTCTTCTGGTTGCATGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR TCA 72 bp | GTTTGTCGAGCCACCTTTCTAGAAGAGGCAGATGTTTaGTGTGCTTTGCTCTTGTGGGACAAGTGGGAAGGC | + |
Preference number: 3 (lower is better) Translates to: VCRATFLEEADV*CALLLWDKWEG Trigger: GCCTTCCCACTTGTCCCACAAGAGCAAAGCACATCAAACATCTGCCTCTTCTAGAAAGGTGGCTCGACAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR TCA 72 bp | CGAGCTGCTGCCCTTGGTCTCAGGCTTTTCTGGAAATaGACACCCCAAACTCCTACTACTGACCTTATGTTC | + |
Preference number: 3 (lower is better) Translates to: RAAALGLRLFWK*TPQTPTTDLMF Trigger: GAACATAAGGTCAGTAGTAGGAGTTTGGGGTGTTCATTTCCAGAAAAGCCTGAGACCAAGGGCAGCAGCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR TCA 72 bp | CACGCTATGTGTGAGGGAGAAGAGGGTCATAACAAATaGCACATACTGTCAACCCATGTCCCTTTCCCCTGG | + |
Preference number: 3 (lower is better) Translates to: HAMCEGEEGHNK*HILSTHVPFPW Trigger: CCAGGGGAAAGGGACATGGGTTGACAGTATGTGTCATTTGTTATGACCCTCTTCTCCCTCACACATAGCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR TCA 72 bp | CCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTaGTCTTATCCCCAGACACTGACAATGTCCCGGTCT | + |
Preference number: 3 (lower is better) Translates to: PLVMIVMSATPD*SYPQTLTMSRS Trigger: AGACCGGGACATTGTCAGTGTCTGGGGATAAGATCAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR GCA 72 bp | GAACACAAGATAACCCTGACAGGAATCCAGGAGCTTTaGAGCTACCAGATCACAGGCACTGCCAAACAGGTT | + |
Preference number: 3 (lower is better) Translates to: EHKITLTGIQEL*SYQITGTAKQV Trigger: AACCTGTTTGGCAGTGCCTGTGATCTGGTAGCTGCAAAGCTCCTGGATTCCTGTCAGGGTTATCTTGTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR GCA 72 bp | AAAAACAGTCAAAGTGTCCACATTTGCATTGTGAGTTaGGCAGGGGCACCAGCTCCTCCGCTCATCCTTCAA | + |
Preference number: 3 (lower is better) Translates to: KNSQSVHICIVS*AGAPAPPLILQ Trigger: TTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGACACTTTGACTGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | CTTTTGGTTTGGTTTCAGATGCTGGTGGGTGGAGAATaGTCCAGATCGACTCTTCTGTTTGTCGAGCCACCT | + |
Preference number: 3 (lower is better) Translates to: LLVWFQMLVGGE*SRSTLLFVEPP Trigger: AGGTGGCTCGACAAACAGAAGAGTCGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | AAGGGAGCTCTTGCTGAAGACCCAGCTCCCTCTTTATaGGTAAACACTCAAGCTCTGGTCTCAGATATGGTG | + |
Preference number: 3 (lower is better) Translates to: KGALAEDPAPSL*VNTQALVSDMV Trigger: CACCATATCTGAGACCAGAGCTTGAGTGTTTACCCATAAAGAGGGAGCTGGGTCTTCAGCAAGAGCTCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | GAGTATGGCAGGTCCTTCACTAAGGGTGTGGTACTTTaGGGACAGGAGAGCCTGCATAAAAACAAAGAATGG | + |
Preference number: 3 (lower is better) Translates to: EYGRSFTKGVVL*GQESLHKNKEW Trigger: CCATTCTTTGTTTTTATGCAGGCTCTCCTGTCCCCAAAGTACCACACCCTTAGTGAAGGACCTGCCATACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | TCTGGCAACAAGGTTTGTGCCAACTTCACAAAGTCTTaGCTTTCCTATAACATCAATGCCAGAGAGGCTGGG | + |
Preference number: 3 (lower is better) Translates to: SGNKVCANFTKS*LSYNINAREAG Trigger: CCCAGCCTCTCTGGCATTGATGTTATAGGAAAGCCAAGACTTTGTGAAGTTGGCACAAACCTTGTTGCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | AACATGGCCCATTGTTTGCACAGGAACAAGAAACCCTaGAATGCCTTTGGTGATGATAGTGATGTCAGCGAC | + |
Preference number: 3 (lower is better) Translates to: NMAHCLHRNKKP*NAFGDDSDVSD Trigger: GTCGCTGACATCACTATCATCACCAAAGGCATTCCAGGGTTTCTTGTTCCTGTGCAAACAATGGGCCATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR TCA 72 bp | GCCAGAGCACCCAGATTACATGCTAGCCTGCATGTTTaGAGGATGGTGTGGAACTTAGTTTCTGTAATTCTG | + |
Preference number: 3 (lower is better) Translates to: ARAPRLHASLHV*RMVWNLVSVIL Trigger: CAGAATTACAGAAACTAAGTTCCACACCATCCTTCAAACATGCAGGCTAGCATGTAATCTGGGTGCTCTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | TTTGTAACTGCCTTTTGGTTTGGTTTCAGATGCTGGTaGGTGGAGAATGGTCCAGATCGACTCTTCTGTTTG | + |
Preference number: 3 (lower is better) Translates to: FVTAFWFGFRCW*VENGPDRLFCL Trigger: CAAACAGAAGAGTCGATCTGGACCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR-3UTR CAA 90 bp | CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTTTTCAAAATTCTGTCTaGTTTCCTAAGCTCACACAC | + |
Preference number: 3 (lower is better) Translates to: LTLVLKGRERARSRCQHPFQNSV*FPKLTH Trigger: GTGTGTGAGCTTAGGAAACAAGACAGAATTTTGAAA...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR-3UTR CAA 90 bp | AATGCCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTGATCTTATCCCCACTCATCTGCAAAGCTTaGAAAGCAGATGTAATGGAG | + |
Preference number: 3 (lower is better) Translates to: NAFGDDSDVSDSRLILSPLICKA*KADVME Trigger: CTCCATTACATCTGCTTTCAAAGCTTTGCAGATGAG...TGGGGATAAGATCAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | AGAAGAGTAACCCTGAGGCATCCTGGTGTCAGGCTCTaGGTGTGCTCAACAAACAACATTAACAACTTTAAA | + |
Preference number: 3 (lower is better) Translates to: RRVTLRHPGVRL*VCSTNNINNFK Trigger: TTTAAAGTTGTTAATGTTGTTTGTTGAGCACACCCAGAGCCTGACACCAGGATGCCTCAGGGTTACTCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | GTATGCTCAACACATCCAGCATGTCTATGTGTAAGCTaGACACAGAGAAAAAGAATGCCACGTTGGTGTTTG | + |
Preference number: 3 (lower is better) Translates to: VCSTHPACLCVS*TQRKRMPRWCL Trigger: CAAACACCAACGTGGCATTCTTTTTCTCTGTGTCCAGCTTACACATAGACATGCTGGATGTGTTGAGCATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR TCA 72 bp | GCTTTTCTGGAAATGAACACCCCAAACTCCTACTACTaGCCTTATGTTCTAGAAGAGCCTAGATCAATCCCA | + |
Preference number: 3 (lower is better) Translates to: AFLEMNTPNSYY*PYVLEEPRSIP Trigger: TGGGATTGATCTAGGCTCTTCTAGAACATAAGGTCAGTAGTAGGAGTTTGGGGTGTTCATTTCCAGAAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR CCA 72 bp | TGTGTAAGCTGGACACAGAGAAAAAGAATGCCACGTTaGTGTTTGGAACCAAATTCCTCAGTTGTGGGTAAA | + |
Preference number: 3 (lower is better) Translates to: CVSWTQRKRMPR*CLEPNSSVVGK Trigger: TTTACCCACAACTGAGGAATTTGGTTCCAAACACCAACGTGGCATTCTTTTTCTCTGTGTCCAGCTTACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
3UTR TCA 72 bp | TCCTTCAAGTGTGTGTTAAACAGAGTAACTGAAAAGTaGGGTTTAATCACACATGAATCTGTACCCCAAAGA | + |
Preference number: 3 (lower is better) Translates to: SFKCVLNRVTEK*GLITHESVPQR Trigger: TCTTTGGGGTACAGATTCATGTGTGATTAAACCTCACTTTTCAGTTACTCTGTTTAACACACACTTGAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
||
CDS-3UTR CCA 90 bp | TTTGGCCGGCTGGGGCAGGCCATCTCTGGACTTGGGAACAGCGTGTCTTGGGCGTGCCGCAACTGGGAGTaGATGAAGCGCCACATGAGC | + |
Preference number: 4 (lower is better) Translates to: FGRLGQAISGLGNSVSWACRNWE*MKRHMS Trigger: GCTCATGTGGCGCTTCATCCACTCCCAGTTGCGGCA...CGCCCAAGACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CCA 90 bp | TTTGGCCGGCTGGGGCAGGCCATCTCTGGACTTGGGAACAGCGTGTCTTGGGCGGGTGACCAGGTCCTTTaGGCCATAGTGGTAGTGCAC | + |
Preference number: 4 (lower is better) Translates to: FGRLGQAISGLGNSVSWAGDQVL*AIVVVH Trigger: GTGCACTACCACTATGGCCCAAAGGACCTGGTCACC...CGCCCAAGACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 72 bp | GCAAGTTTGGCCGGCTGGGGCAGGCCATCTCTGGACTaGGGAACAGCGTGTCTTGGGCGGGTTTGTAACTGC | + |
Preference number: 4 (lower is better) Translates to: ASLAGWGRPSLD*GTACLGRVCNC Trigger: GCAGTTACAAACCCGCCCAAGACACGCTGTTCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAACTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 72 bp | TGCAGTAAGGGACAAGACCACCGGCTGGGAGGGTTATaGCACAACCCGGAATGGCAGGCGGGAACAGGCAGG | + |
Preference number: 4 (lower is better) Translates to: CSKGQDHRLGGL*HNPEWQAGTGR Trigger: CCTGCCTGTTCCCGCCTGCCATTCCGGGTTGTGCAATAACCCTCCCAGCCGGTGGTCTTGTCCCTTACTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR TCA 90 bp | TCCCCCTTTGATGCCAAGGCTTCTGCTGGTGGAGACGAGCATGGGCAGGAGGGTGCCACCGCGCTGAGATaGAAGACAAGCAGCTGTCCA | + |
Preference number: 4 (lower is better) Translates to: SPFDAKASAGGDEHGQEGATALR*KTSSCP Trigger: TGGACAGCTGCTTGTCTTTCATCTCAGCGCGGTGGC...ACCCTCCTGCCCATGCTCGTCTCCACCAGCAGAAGCCTTGGCATCAAAGGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CCA 90 bp | CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTCGCCAGTGCCGCAACTaGGAGTGGATGAAGCGCCAC | + |
Preference number: 4 (lower is better) Translates to: PQASLIRQEAWVSAAGLPRQCRN*EWMKRH Trigger: GTGGCGCTTCATCCACTCCCAGTTGCGGCACTGGCG...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR TCA 90 bp | GTAAGGGATGATGACGACCTCTCCTGTGGGTCCCCTCTCTCCAGATATTGCAGGAACCAGGTTCTCTCTTaGGGAGCTTGGCTGGGGGCC | + |
Preference number: 4 (lower is better) Translates to: VRDDDDLSCGSPLSRYCRNQVLS*GAWLGA Trigger: GGCCCCCAGCCAAGCTCCTCAAGAGAGAACCTGGTT...CCTGCAATATCTGGAGAGAGGGGACCCACAGGAGAGGTCGTCATCATCCCTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CCA 90 bp | GCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACCACATGAGCCAGGCCTaGGCGACACACACCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: AGAPAPPLILQVCVKQSNHMSQA*ATHTSS Trigger: GCTGCTGGTGTGTGTCGCCCAGGCCTGGCTCATGTG...GTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CCA 90 bp | TCCCCCTTTGATGCCAAGGCTTCTGCTGGTGGAGACGAGCATGGGCAGGAGGGTTCCTGGACCACAGCATaGAAGATGATGGTGATGACG | + |
Preference number: 4 (lower is better) Translates to: SPFDAKASAGGDEHGQEGSWTTA*KMMVMT Trigger: CGTCATCACCATCATCTTCCATGCTGTGGTCCAGGA...ACCCTCCTGCCCATGCTCGTCTCCACCAGCAGAAGCCTTGGCATCAAAGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CCA 90 bp | GAAGGCAGGCTGCTTTCCAATTCAAATGACACACTGGAAGCTCTCTGGAGTCCTGCTTGGCTGGGGGCCTaGGGACAGCAGAGACTCTAC | + |
Preference number: 4 (lower is better) Translates to: EGRLLSNSNDTLEALWSPAWLGA*GQQRLY Trigger: GTAGAGTCTCTGCTGTCCCCAGGCCCCCAGCCAAGC...AGGACTCCAGAGAGCTTCCAGTGTGTCATTTGAATTGGAAAGCAGCCTGCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 72 bp | CTGTTTCTGCAGAGAGATGAAGTTGAGGTTGCAAGTTaGGCCGGCTGGGGCAGGCCATCTCTGGACTTGGGA | + |
Preference number: 4 (lower is better) Translates to: LFLQRDEVEVAS*AGWGRPSLDLG Trigger: TCCCAAGTCCAGAGATGGCCTGCCCCAGCCGGCCAAACTTGCAACCTCAACTTCATCTCTCTGCAGAAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CCA 90 bp | CATGCAACCAGAAGAGTAACCCTGAGGCATCCTGGTGTCAGGCTCTGGGTGTGCTCGGGGTCAAACACTTaGTTTTCCACCCGAGCCAAT | + |
Preference number: 4 (lower is better) Translates to: HATRRVTLRHPGVRLWVCSGSNT*FSTRAN Trigger: ATTGGCTCGGGTGGAAAACCAAGTGTTTGACCCCGA...GCACACCCAGAGCCTGACACCAGGATGCCTCAGGGTTACTCTTCTGGTTGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CCA 90 bp | GTCCACATTTGCATTGTGAGTTGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTCAGAGACTCTACGCTTaGCACTCTGCTCCTTCCAAT | + |
Preference number: 4 (lower is better) Translates to: VHICIVSCAGAPAPPLILQRLYA*HSAPSN Trigger: ATTGGAAGGAGCAGAGTGCCAAGCGTAGAGTCTCTG...AAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CCA 90 bp | CTGCTCTTTATACCCCTGTTCCTCCAAGACCTTCACATGTCTCATGCTTGTCACCTTGAGGAGCTTGGCTaGGGGCCTGGGGACAGCAGA | + |
Preference number: 4 (lower is better) Translates to: LLFIPLFLQDLHMSHACHLEELG*GPGDSR Trigger: TCTGCTGTCCCCAGGCCCCCAGCCAAGCTCCTCAAG...GTGACAAGCATGAGACATGTGAAGGTCTTGGAGGAACAGGGGTATAAAGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR TCA 90 bp | GAAGGCAGGCTGCTTTCCAATTCAAATGACACACTGGAAGCTCTCTGGAGTCCTACCACGCCACCGCGCTaGGATGAAAGACAAGCAGCT | + |
Preference number: 4 (lower is better) Translates to: EGRLLSNSNDTLEALWSPTTPPR*DERQAA Trigger: AGCTGCTTGTCTTTCATCTCAGCGCGGTGGCGTGGT...AGGACTCCAGAGAGCTTCCAGTGTGTCATTTGAATTGGAAAGCAGCCTGCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 72 bp | GGAACAGCGTGTCTTGGGCGGGTTTGTAACTGCCTTTaGGTTTGGTTTCAGATGCTGGTGGGTGGAGAATGG | + |
Preference number: 4 (lower is better) Translates to: GTACLGRVCNCL*VWFQMLVGGEW Trigger: CCATTCTCCACCCACCAGCATCTGAAACCAAACCAAAAGGCAGTTACAAACCCGCCCAAGACACGCTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR TCA 90 bp | GAAGGCAGGCTGCTTTCCAATTCAAATGACACACTGGAAGCTCTCTGGAGTCCTGAGTTTCTTAGTCCGTaGGGAGGTCCCGTTCTCTGC | + |
Preference number: 4 (lower is better) Translates to: EGRLLSNSNDTLEALWSPEFLSP*GGPVLC Trigger: GCAGAGAACGGGACCTCCTCACGGACTAAGAAACTC...AGGACTCCAGAGAGCTTCCAGTGTGTCATTTGAATTGGAAAGCAGCCTGCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CCA 90 bp | GTCCACATTTGCATTGTGAGTTGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTTCTAAGATGTACTCCTaGACCACAGCATGGAAGATG | + |
Preference number: 4 (lower is better) Translates to: VHICIVSCAGAPAPPLILSKMYS*TTAWKM Trigger: CATCTTCCATGCTGTGGTCCAGGAGTACATCTTAGA...AAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR GCA 90 bp | CCCCAAGCTTCCCTTATTAGACAGGAGGCATGGGTGTCTGCAGCTGGGTTACCTGCAGAAACCGATGTCTaGATGGTTGTGGATGATGAA | + |
Preference number: 4 (lower is better) Translates to: PQASLIRQEAWVSAAGLPAETDV*MVVDDE Trigger: TTCATCATCCACAACCATGCAGACATCGGTTTCTGC...AGGTAACCCAGCTGCAGACACCCATGCCTCCTGTCTAATAAGGGAAGCTTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR GCA 90 bp | GCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACAGTTCAGGTAGTGAGTaGAACCAGTATGCCAGCTGT | + |
Preference number: 4 (lower is better) Translates to: AGAPAPPLILQVCVKQSNSSGSE*NQYASC Trigger: ACAGCTGGCATACTGGTTGCACTCACTACCTGAACT...GTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR GCA 90 bp | AATGCCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTGATCTTATCCCCACAATACTCCCGCCAGTaGCGCAACTGGGAGTGGATG | + |
Preference number: 4 (lower is better) Translates to: NAFGDDSDVSDSRLILSPQYSRQ*RNWEWM Trigger: CATCCACTCCCAGTTGCGGCACTGGCGGGAGTATTG...TGGGGATAAGATCAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 72 bp | GAAAAACAGTCAAAGTGTCCACATTTGCATTGTGAGTaGCGCAGGGGCACCAGCTCCTCCGCTCATCCTTCA | + |
Preference number: 4 (lower is better) Translates to: EKQSKCPHLHCE*RRGTSSSAHPS Trigger: TGAAGGATGAGCGGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGACACTTTGACTGTTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR GCA 90 bp | GAAGGCAGGCTGCTTTCCAATTCAAATGACACACTGGAAGCTCTCTGGAGTCCTCTCGTTATTCTCGTCTaGAAAGTGGAAGAGCCGAGC | + |
Preference number: 4 (lower is better) Translates to: EGRLLSNSNDTLEALWSPLVILV*KVEEPS Trigger: GCTCGGCTCTTCCACTTTGCAGACGAGAATAACGAG...AGGACTCCAGAGAGCTTCCAGTGTGTCATTTGAATTGGAAAGCAGCCTGCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR GCA 90 bp | TGCTCTTTATACCCCTGTTCCTCCAAGACCTTCACATGTCTCATGCTTGTCACAACACCAGCAGCAGCATaGCAAGCCTACAAGGCAAGG | + |
Preference number: 4 (lower is better) Translates to: CSLYPCSSKTFTCLMLVTTPAAA*QAYKAR Trigger: CCTTGCCTTGTAGGCTTGGCATGCTGCTGCTGGTGT...TGTGACAAGCATGAGACATGTGAAGGTCTTGGAGGAACAGGGGTATAAAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CCA 90 bp | CTGCTCTTTATACCCCTGTTCCTCCAAGACCTTCACATGTCTCATGCTTGTCACGAAAGAGGGCCTCGGTaGAGTACTGCAGTAGTAGCA | + |
Preference number: 4 (lower is better) Translates to: LLFIPLFLQDLHMSHACHERGPR*STAVVA Trigger: TGCTACTACTGCAGTACTCCACCGAGGCCCTCTTTC...GTGACAAGCATGAGACATGTGAAGGTCTTGGAGGAACAGGGGTATAAAGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 72 bp | TGGTGGGTGGAGAATGGTCCAGATCGACTCTTCTGTTaGTCGAGCCACCTTTCTAGAAGAGGCAGATGTTTG | + |
Preference number: 4 (lower is better) Translates to: WWVENGPDRLFC*SSHLSRRGRCL Trigger: CAAACATCTGCCTCTTCTAGAAAGGTGGCTCGACAAACAGAAGAGTCGATCTGGACCATTCTCCACCCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 72 bp | AAAGATCTCGAAGACGTCACAACACATTCTGTAAGATaGCCACAGAAACCCACGCAGGGCCGTGCGAATGAC | + |
Preference number: 4 (lower is better) Translates to: KDLEDVTTHSVR*PQKPTQGRAND Trigger: GTCATTCGCACGGCCCTGCGTGGGTTTCTGTGGCAATCTTACAGAATGTGTTGTGACGTCTTCGAGATCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 72 bp | CAGGCTAATGTAGAAAAACAGTCAAAGTGTCCACATTaGCATTGTGAGTTGCGCAGGGGCACCAGCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: QANVEKQSKCPH*HCELRRGTSSS Trigger: GGAGGAGCTGGTGCCCCTGCGCAACTCACAATGCAAATGTGGACACTTTGACTGTTTTTCTACATTAGCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 72 bp | TGTTTGTCGAGCCACCTTTCTAGAAGAGGCAGATGTTaGATGTGCTTTGCTCTTGTGGGACAAGTGGGAAGG | + |
Preference number: 4 (lower is better) Translates to: CLSSHLSRRGRC*MCFALVGQVGR Trigger: CCTTCCCACTTGTCCCACAAGAGCAAAGCACATCAAACATCTGCCTCTTCTAGAAAGGTGGCTCGACAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR TCA 90 bp | AAGCTGGACACAGAGAAAAAGAATGCCACGTTGGTGTTTGGAACCAAATTCCTCCGTAGAACAAGATGGTaGCCAGGTCCTTTGGGCCAT | + |
Preference number: 4 (lower is better) Translates to: KLDTEKKNATLVFGTKFLRRTRW*PGPLGH Trigger: ATGGCCCAAAGGACCTGGTCACCATCTTGTTCTACG...GAGGAATTTGGTTCCAAACACCAACGTGGCATTCTTTTTCTCTGTGTCCAGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR GCA 90 bp | GAAGGCAGGCTGCTTTCCAATTCAAATGACACACTGGAAGCTCTCTGGAGTCCTCACTGTCTCACTGTCTaGTGTAGGCACACTAATGTT | + |
Preference number: 4 (lower is better) Translates to: EGRLLSNSNDTLEALWSPHCLTV*CRHTNV Trigger: AACATTAGTGTGCCTACAGCAGACAGTGAGACAGTG...AGGACTCCAGAGAGCTTCCAGTGTGTCATTTGAATTGGAAAGCAGCCTGCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CCA 90 bp | CTAACACTTGTATTAAAAGGCAGGGAAAGGGCGAGAAGTCGGTGCCAGCATCCTAAACCGATGTCTGCATaGTTGTGGATGATGAACTCC | + |
Preference number: 4 (lower is better) Translates to: LTLVLKGRERARSRCQHPKPMSA*LWMMNS Trigger: GGAGTTCATCATCCACAACCATGCAGACATCGGTTT...AGGATGCTGGCACCGACTTCTCGCCCTTTCCCTGCCTTTTAATACAAGTGTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR GCA 90 bp | GTGGAACTTAGTTTCTGTAATTCTGGCAACAAGGTTTGTGCCAACTTCACAAAGGGAGGTCCCGTTCTCTaGCTTCACCACTCCGTTTTC | + |
Preference number: 4 (lower is better) Translates to: VELSFCNSGNKVCANFTKGGPVL*LHHSVF Trigger: GAAAACGGAGTGGTGAAGGCAGAGAACGGGACCTCC...CTTTGTGAAGTTGGCACAAACCTTGTTGCCAGAATTACAGAAACTAAGTTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 72 bp | GGAAGGCCAGGCAGAATATTAGGTAACATTAATGTCTaGTGTTACCAAGAACTGCTCCCCTATACTCTAGCT | + |
Preference number: 4 (lower is better) Translates to: GRPGRILGNINV*CYQELLPYTLA Trigger: AGCTAGAGTATAGGGGAGCAGTTCTTGGTAACACAAGACATTAATGTTACCTAATATTCTGCCTGGCCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 72 bp | AGCTGGACACAGAGAAAAAGAATGCCACGTTGGTGTTaGGAACCAAATTCCTCAGTTGTGGGTAAACTAGAT | + |
Preference number: 4 (lower is better) Translates to: SWTQRKRMPRWC*EPNSSVVGKLD Trigger: ATCTAGTTTACCCACAACTGAGGAATTTGGTTCCAAACACCAACGTGGCATTCTTTTTCTCTGTGTCCAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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3UTR CAA 72 bp | CATAAATATGGCAGGTACACATTTTCCTTGAGTTCCTaGTTGAATTTGGTCCATAACATGAACAGGCTAATG | + |
Preference number: 4 (lower is better) Translates to: HKYGRYTFSLSS*LNLVHNMNRLM Trigger: CATTAGCCTGTTCATGTTATGGACCAAATTCAACAAGGAACTCAAGGAAAATGTGTACCTGCCATATTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS CCA 90 bp | GCACTCTGCTCCTTCCAATACTCCCGCCAGTGCCGCAACTGGGAGTaGATGAAGCGCCACATGAGCCAGGCCTGGGCGACACACACCAGC | + |
Preference number: 5 (lower is better) Translates to: ALCSFQYSRQCRNWE*MKRHMSQAWATHTS Trigger: GCTGGTGTGTGTCGCCCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGTTGCGGCACTGGCGGGAGTATTGGAAGGAGCAGAGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS CCA 90 bp | CGCTTGGCACTCTGCTCCTTCCAATACTCCCGCCAGTGCCGCAACTaGGAGTGGATGAAGCGCCACATGAGCCAGGCCTGGGCGACACAC | + |
Preference number: 5 (lower is better) Translates to: RLALCSFQYSRQCRN*EWMKRHMSQAWATH Trigger: GTGTGTCGCCCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGTTGCGGCACTGGCGGGAGTATTGGAAGGAGCAGAGTGCCAAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS GCA 90 bp | TTGGCTGGGGGCCTGGGGACAGCAGAGACTCTACGCTTGGCACTCTaGTCCTTCCAATACTCCCGCCAGTGCCGCAACTGGGAGTGGATG | + |
Preference number: 5 (lower is better) Translates to: LAGGLGTAETLRLAL*SFQYSRQCRNWEWM Trigger: CATCCACTCCCAGTTGCGGCACTGGCGGGAGTATTGGAAGGAGCAGAGTGCCAAGCGTAGAGTCTCTGCTGTCCCCAGGCCCCCAGCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS GCA 90 bp | GAGACTCTACGCTTGGCACTCTGCTCCTTCCAATACTCCCGCCAGTaGCGCAACTGGGAGTGGATGAAGCGCCACATGAGCCAGGCCTGG | + |
Preference number: 5 (lower is better) Translates to: ETLRLALCSFQYSRQ*RNWEWMKRHMSQAW Trigger: CCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGTTGCGGCACTGGCGGGAGTATTGGAAGGAGCAGAGTGCCAAGCGTAGAGTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS CCA 90 bp | CGTCTGCAAAGTGGAAGAGCCGAGCCATGTGAAAGAGGGCCTCGGTaGAGTACTGCAGTAGTAGCAAGATCAGCCCCAGGCGGCTCAGGT | + |
Preference number: 5 (lower is better) Translates to: RLQSGRAEPCERGPR*STAVVARSAPGGSG Trigger: ACCTGAGCCGCCTGGGGCTGATCTTGCTACTACTGCAGTACTCCACCGAGGCCCTCTTTCACATGGCTCGGCTCTTCCACTTTGCAGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CAA 90 bp | GGTGGCCAAAGGAACACATGGCGGGCGATGGAGTCCTTGGGGCTTCCTGTTTCTGCAGAGACTCTACGCTaGGCACTCTGCTCCTTCCAA | + |
Preference number: 5 (lower is better) Translates to: GGQRNTWRAMESLGLPVSAETLR*ALCSFQ Trigger: TTGGAAGGAGCAGAGTGCCAAGCGTAGAGTCTCTGC...AGAAACAGGAAGCCCCAAGGACTCCATCGCCCGCCATGTGTTCCTTTGGCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CAA 90 bp | GCAGGGGCACCAGCTCCTCCGCTCATCCTTCAAGTGTGTGTTAAACAGAGTAACTCTCTCTTGAGGAGCTaGGCTGGGGGCCTGGGGACA | + |
Preference number: 5 (lower is better) Translates to: AGAPAPPLILQVCVKQSNSLLRS*AGGLGT Trigger: TGTCCCCAGGCCCCCAGCCAAGCTCCTCAAGAGAGA...GTTACTCTGTTTAACACACACTTGAAGGATGAGCGGAGGAGCTGGTGCCCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CAA 90 bp | CAGAGAGATGAAGTTGAGGTTGCAAGTTTGGCCGGCTGGGGCAGGCCATCTCTGCCGATGTCTGCATGGTaGTGGATGATGAACTCCTGG | + |
Preference number: 5 (lower is better) Translates to: QRDEVEVASLAGWGRPSLPMSAW*WMMNSW Trigger: CCAGGAGTTCATCATCCACAACCATGCAGACATCGG...CAGAGATGGCCTGCCCCAGCCGGCCAAACTTGCAACCTCAACTTCATCTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CAA 90 bp | TCCCCCTTTGATGCCAAGGCTTCTGCTGGTGGAGACGAGCATGGGCAGGAGGGTAATAGGAAGGCAGTCTaGGCTGTGACCTCGAACATA | + |
Preference number: 5 (lower is better) Translates to: SPFDAKASAGGDEHGQEGNRKAV*AVTSNI Trigger: TATGTTCGAGGTCACAGCCAAGACTGCCTTCCTATT...ACCCTCCTGCCCATGCTCGTCTCCACCAGCAGAAGCCTTGGCATCAAAGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CAA 90 bp | CAGGGGGTTCTCGGTCCACCAGTCCTGCCACTGGCACCTACTGGAATTCCAGGGCTTCCCAGAGGCTTCTaGGGTTTGTTAAATATCCTT | + |
Preference number: 5 (lower is better) Translates to: QGVLGPPVLPLAPTGIPGLPRGF*GLLNIL Trigger: AAGGATATTTAACAAACCCAAGAAGCCTCTGGGAAG...CCCTGGAATTCCAGTAGGTGCCAGTGGCAGGACTGGTGGACCGAGAACCCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS TCA 90 bp | AGCCTCTCGTTATTCTCGTCTGCAAAGTGGAAGAGCCGAGCCATGTaGAAGAGGGCCTCGGTGGAGTACTGCAGTAGTAGCAAGATCAGC | + |
Preference number: 5 (lower is better) Translates to: SLSLFSSAKWKSRAM*KRASVEYCSSSKIS Trigger: GCTGATCTTGCTACTACTGCAGTACTCCACCGAGGCCCTCTTTCACATGGCTCGGCTCTTCCACTTTGCAGACGAGAATAACGAGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS GCA 90 bp | CATAAGCCCGATGAGGACGCAGAGCACCAAGCAGAAACCGATGTCTaGATGGTTGTGGATGATGAACTCCTGGCTGAAGAGCGGGTAACT | + |
Preference number: 5 (lower is better) Translates to: HKPDEDAEHQAETDV*MVVDDELLAEERVT Trigger: AGTTACCCGCTCTTCAGCCAGGAGTTCATCATCCACAACCATGCAGACATCGGTTTCTGCTTGGTGCTCTGCGTCCTCATCGGGCTTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS CCA 90 bp | CTACAAGGCAAGGTGTTAAAGTTCCCTTTCTCGGGGTCAAACACTTaGTTTTCCACCCGAGCCAATCCAAAGCCAATGGTCAGCACAGCG | + |
Preference number: 5 (lower is better) Translates to: LQGKVLKFPFSGSNT*FSTRANPKPMVSTA Trigger: CGCTGTGCTGACCATTGGCTTTGGATTGGCTCGGGTGGAAAACCAAGTGTTTGACCCCGAGAAAGGGAACTTTAACACCTTGCCTTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CAA 90 bp | ATCAATGCCAGAGAGGCTGGGTGGGTGAGAAAGCACCCCATAGTTCTCCCAAGCAGGCGTTTGCTGATTTaGTCTAAGATGTACTCCTGG | + |
Preference number: 5 (lower is better) Translates to: INAREAGWVRKHPIVLPSRRLLI*SKMYSW Trigger: CCAGGAGTACATCTTAGACAAAATCAGCAAACGCCT...GCTTGGGAGAACTATGGGGTGCTTTCTCACCCACCCAGCCTCTCTGGCATTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CAA 90 bp | GAAGGCAGGCTGCTTTCCAATTCAAATGACACACTGGAAGCTCTCTGGAGTCCTGTACAGACAAATGTATaGCAGCTGGCGTGGGACTTC | + |
Preference number: 5 (lower is better) Translates to: EGRLLSNSNDTLEALWSPVQTNV*QLAWDF Trigger: GAAGTCCCACGCCAGCTGCAATACATTTGTCTGTAC...AGGACTCCAGAGAGCTTCCAGTGTGTCATTTGAATTGGAAAGCAGCCTGCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS-3UTR CAA 90 bp | AATGCCTTTGGTGATGATAGTGATGTCAGCGACTCCAGACTGATCTTATCCCCACCAGATTCATTGAACTaGCTGTGTTTGACCTTGGAG | + |
Preference number: 5 (lower is better) Translates to: NAFGDDSDVSDSRLILSPPDSLN*LCLTLE Trigger: CTCCAAGGTCAAACACAGCAAGTTCAATGAATCTGG...TGGGGATAAGATCAGTCTGGAGTCGCTGACATCACTATCATCACCAAAGGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS CCA 72 bp | TGGCTGGGGGCCTGGGGACAGCAGAGACTCTACGCTTaGCACTCTGCTCCTTCCAATACTCCCGCCAGTGCC | + |
Preference number: 6 (lower is better) Translates to: WLGAWGQQRLYA*HSAPSNTPASA Trigger: GGCACTGGCGGGAGTATTGGAAGGAGCAGAGTGCCAAGCGTAGAGTCTCTGCTGTCCCCAGGCCCCCAGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS CAA 90 bp | TTGAGGAGCTTGGCTGGGGGCCTGGGGACAGCAGAGACTCTACGCTaGGCACTCTGCTCCTTCCAATACTCCCGCCAGTGCCGCAACTGG | + |
Preference number: 6 (lower is better) Translates to: LRSLAGGLGTAETLR*ALCSFQYSRQCRNW Trigger: CCAGTTGCGGCACTGGCGGGAGTATTGGAAGGAGCAGAGTGCCAAGCGTAGAGTCTCTGCTGTCCCCAGGCCCCCAGCCAAGCTCCTCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS GCA 72 bp | GGCCTGGGGACAGCAGAGACTCTACGCTTGGCACTCTaGTCCTTCCAATACTCCCGCCAGTGCCGCAACTGG | + |
Preference number: 6 (lower is better) Translates to: GLGTAETLRLAL*SFQYSRQCRNW Trigger: CCAGTTGCGGCACTGGCGGGAGTATTGGAAGGAGCAGAGTGCCAAGCGTAGAGTCTCTGCTGTCCCCAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS CCA 72 bp | TCCTTCCAATACTCCCGCCAGTGCCGCAACTGGGAGTaGATGAAGCGCCACATGAGCCAGGCCTGGGCGACA | + |
Preference number: 6 (lower is better) Translates to: SFQYSRQCRNWE*MKRHMSQAWAT Trigger: TGTCGCCCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGTTGCGGCACTGGCGGGAGTATTGGAAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS CCA 72 bp | CTCTGCTCCTTCCAATACTCCCGCCAGTGCCGCAACTaGGAGTGGATGAAGCGCCACATGAGCCAGGCCTGG | + |
Preference number: 6 (lower is better) Translates to: LCSFQYSRQCRN*EWMKRHMSQAW Trigger: CCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGTTGCGGCACTGGCGGGAGTATTGGAAGGAGCAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS CAA 72 bp | TTGGCTGGGGGCCTGGGGACAGCAGAGACTCTACGCTaGGCACTCTGCTCCTTCCAATACTCCCGCCAGTGC | + |
Preference number: 6 (lower is better) Translates to: LAGGLGTAETLR*ALCSFQYSRQC Trigger: GCACTGGCGGGAGTATTGGAAGGAGCAGAGTGCCAAGCGTAGAGTCTCTGCTGTCCCCAGGCCCCCAGCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS GCA 72 bp | CGCTTGGCACTCTGCTCCTTCCAATACTCCCGCCAGTaGCGCAACTGGGAGTGGATGAAGCGCCACATGAGC | + |
Preference number: 6 (lower is better) Translates to: RLALCSFQYSRQ*RNWEWMKRHMS Trigger: GCTCATGTGGCGCTTCATCCACTCCCAGTTGCGGCACTGGCGGGAGTATTGGAAGGAGCAGAGTGCCAAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS CCA 72 bp | AACTGGGAGTGGATGAAGCGCCACATGAGCCAGGCCTaGGCGACACACACCAGCAGCAGCATGCCAAGCCTA | + |
Preference number: 6 (lower is better) Translates to: NWEWMKRHMSQA*ATHTSSSMPSL Trigger: TAGGCTTGGCATGCTGCTGCTGGTGTGTGTCGCCCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS CCA 72 bp | AGTGGAAGAGCCGAGCCATGTGAAAGAGGGCCTCGGTaGAGTACTGCAGTAGTAGCAAGATCAGCCCCAGGC | + |
Preference number: 6 (lower is better) Translates to: SGRAEPCERGPR*STAVVARSAPG Trigger: GCCTGGGGCTGATCTTGCTACTACTGCAGTACTCCACCGAGGCCCTCTTTCACATGGCTCGGCTCTTCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS CCA 72 bp | AGGACGCAGAGCACCAAGCAGAAACCGATGTCTGCATaGTTGTGGATGATGAACTCCTGGCTGAAGAGCGGG | + |
Preference number: 6 (lower is better) Translates to: RTQSTKQKPMSA*LWMMNSWLKSG Trigger: CCCGCTCTTCAGCCAGGAGTTCATCATCCACAACCATGCAGACATCGGTTTCTGCTTGGTGCTCTGCGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS TCA 72 bp | TTATTCTCGTCTGCAAAGTGGAAGAGCCGAGCCATGTaGAAGAGGGCCTCGGTGGAGTACTGCAGTAGTAGC | + |
Preference number: 6 (lower is better) Translates to: LFSSAKWKSRAM*KRASVEYCSSS Trigger: GCTACTACTGCAGTACTCCACCGAGGCCCTCTTTCACATGGCTCGGCTCTTCCACTTTGCAGACGAGAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS GCA 72 bp | GATGAGGACGCAGAGCACCAAGCAGAAACCGATGTCTaGATGGTTGTGGATGATGAACTCCTGGCTGAAGAG | + |
Preference number: 6 (lower is better) Translates to: DEDAEHQAETDV*MVVDDELLAEE Trigger: CTCTTCAGCCAGGAGTTCATCATCCACAACCATGCAGACATCGGTTTCTGCTTGGTGCTCTGCGTCCTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS CCA 72 bp | GATGACGACGTAGAACAAGATGGTGACCAGGTCCTTTaGGCCATAGTGGTAGTGCACTGTCTCACTGTCTGC | + |
Preference number: 6 (lower is better) Translates to: DDDVEQDGDQVL*AIVVVHCLTVC Trigger: GCAGACAGTGAGACAGTGCACTACCACTATGGCCCAAAGGACCTGGTCACCATCTTGTTCTACGTCGTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS CAA 90 bp | CCTACAAGGCAAGGTGTTAAAGTTCCCTTTCTCGGGGTCAAACACTaGGTTTTCCACCCGAGCCAATCCAAAGCCAATGGTCAGCACAGC | + |
Preference number: 6 (lower is better) Translates to: PTRQGVKVPFLGVKH*VFHPSQSKANGQHS Trigger: GCTGTGCTGACCATTGGCTTTGGATTGGCTCGGGTGGAAAACCAAGTGTTTGACCCCGAGAAAGGGAACTTTAACACCTTGCCTTGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS TCA 72 bp | GCCCCAGGCGGCTCAGGTTTAAGAGGTATGCCCCAGTaGTGTGAAGAAGGTACAGACAAATGTATTGCAGCT | + |
Preference number: 6 (lower is better) Translates to: APGGSGLRGMPQ*CEEGTDKCIAA Trigger: AGCTGCAATACATTTGTCTGTACCTTCTTCACATCACTGGGGCATACCTCTTAAACCTGAGCCGCCTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS TCA 72 bp | AGGCGGCTCAGGTTTAAGAGGTATGCCCCAGTGATGTaGAGAAGGTACAGACAAATGTATTGCAGCTGGCGT | + |
Preference number: 6 (lower is better) Translates to: RRLRFKRYAPVM*RRYRQMYCSWR Trigger: ACGCCAGCTGCAATACATTTGTCTGTACCTTCTTCACATCACTGGGGCATACCTCTTAAACCTGAGCCGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS CCA 72 bp | GTGAAGAAGGTACAGACAAATGTATTGCAGCTGGCGTaGGACTTCTTCCTTCCGCACCTTCTGGAAGTAGAG | + |
Preference number: 6 (lower is better) Translates to: VKKVQTNVLQLA*DFFLPHLLEVE Trigger: CTCTACTTCCAGAAGGTGCGGAAGGAAGAAGTCCCACGCCAGCTGCAATACATTTGTCTGTACCTTCTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |
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CDS CAA 72 bp | CAAGGTGTTAAAGTTCCCTTTCTCGGGGTCAAACACTaGGTTTTCCACCCGAGCCAATCCAAAGCCAATGGT | + |
Preference number: 6 (lower is better) Translates to: QGVKVPFLGVKH*VFHPSQSKANG Trigger: ACCATTGGCTTTGGATTGGCTCGGGTGGAAAACCAAGTGTTTGACCCCGAGAAAGGGAACTTTAACACCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037998.6 |