Pregenerated sensors for TRAK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026028Ensembl transcript IDs: ENSMUST00000027186.12, ENSMUST00000173590.2, ENSMUST00000174120.2
Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGAATGTTTCAGCTGGTCGGGAAGCCAAGAAATTCTCGGAGACATaGACTCGGGGTTCAAAGGGCAAGGGGGAGGAGCACGGTGACTGC | + |
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Preference number: 1 (lower is better) Translates to: RNVSAGREAKKFSET*TRGSKGKGEEHGDC Trigger: GCAGTCACCGTGCTCCTCCCCCTTGCCCTTTGAACCCCGAGTGCATGTCTCCGAGAATTTCTTGGCTTCCCGACCAGCTGAAACATTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR TCA 90 bp | GTGTGCATGCCTGCAGTACACTACAAGCACAGGTCTGTACACACCTaGCAGCAGACAAGGCCCCAGACGGACAACCCTAACTCCAGATGT | + |
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Preference number: 1 (lower is better) Translates to: VCMPAVHYKHRSVHT*QQTRPQTDNPNSRC Trigger: ACATCTGGAGTTAGGGTTGTCCGTCTGGGGCCTTGTCTGCTGTCAGGTGTGTACAGACCTGTGCTTGTAGTGTACTGCAGGCATGCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR TCA 90 bp | AACCCAGAGTCGTTCATAAATGTGTGCATGTGTGCGATGAACTGTTaGCAGCAGCTAGTCTGGACGAAGGGGCTGAAGGTGGCGAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: NPESFINVCMCAMNC*QQLVWTKGLKVAKG Trigger: TCCCTTCGCCACCTTCAGCCCCTTCGTCCAGACTAGCTGCTGTCAACAGTTCATCGCACACATGCACACATTTATGAACGACTCTGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR TCA 90 bp | TCTTATTTTGCTAATGCTGAGAGTGCACCATTGGATGGATGCATTTaGCCAGGGACCAGCAGGGACGGTATCACCCACTGGCTCAGTAAC | + |
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Preference number: 1 (lower is better) Translates to: SYFANAESAPLDGCI*PGTSRDGITHWLSN Trigger: GTTACTGAGCCAGTGGGTGATACCGTCCCTGCTGGTCCCTGGTCAAATGCATCCATCCAATGGTGCACTCTCAGCATTAGCAAAATAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR TCA 90 bp | TCATATGCTCTTACCACTGTGTGGAGGCTGGCTTTTCTAACCCTCTaGGAGCATCTCTTCTTGGGGAGGAGGCTCAAGAGAGAAAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: SYALTTVWRLAFLTL*EHLFLGRRLKRERQ Trigger: TTGCCTTTCTCTCTTGAGCCTCCTCCCCAAGAAGAGATGCTCTCAGAGGGTTAGAAAAGCCAGCCTCCACACAGTGGTAAGAGCATATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR TCA 90 bp | CTGGCTTCCAAGGCAAAACTCTGCTTCCAGTGGCCACTTAGGCACTaGCAGAAGGACAGAATTATTGTCACCACAGAACTCCACAATCTC | + |
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Preference number: 1 (lower is better) Translates to: LASKAKLCFQWPLRH*QKDRIIVTTELHNL Trigger: GAGATTGTGGAGTTCTGTGGTGACAATAATTCTGTCCTTCTGTCAGTGCCTAAGTGGCCACTGGAAGCAGAGTTTTGCCTTGGAAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR GCA 90 bp | CCATCCTCAAAGACCCTCTTGCAAACAAACGTCCTATCCCTTCACTaGGCTCTCTCCACATTCACAGTCCTTCTGCAACATCCCTTTTCT | + |
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Preference number: 1 (lower is better) Translates to: PSSKTLLQTNVLSLH*ALSTFTVLLQHPFS Trigger: AGAAAAGGGATGTTGCAGAAGGACTGTGAATGTGGAGAGAGCGCAGTGAAGGGATAGGACGTTTGTTTGCAAGAGGGTCTTTGAGGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR TCA 90 bp | GTGCAAACTGGGGCTCCAAAGCTACCCATCATGACCGGAAGACTCTaGTTCCTCCTCAGTCCACACAATAAACTGCCACCTGAATTTAAA | + |
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Preference number: 1 (lower is better) Translates to: VQTGAPKLPIMTGRL*FLLSPHNKLPPEFK Trigger: TTTAAATTCAGGTGGCAGTTTATTGTGTGGACTGAGGAGGAATCAGAGTCTTCCGGTCATGATGGGTAGCTTTGGAGCCCCAGTTTGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR CCA 90 bp | GACAAGATAAATTTTCTTATTTTGCTAATGCTGAGAGTGCACCATTaGATGGATGCATTTGACCAGGGACCAGCAGGGACGGTATCACCC | + |
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Preference number: 1 (lower is better) Translates to: DKINFLILLMLRVHH*MDAFDQGPAGTVSP Trigger: GGGTGATACCGTCCCTGCTGGTCCCTGGTCAAATGCATCCATCCAATGGTGCACTCTCAGCATTAGCAAAATAAGAAAATTTATCTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTTCAGCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGAGGGGGGGTGGCCAGGGCCTTaGGGCAAGGCTGCAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: ASSACLPSSSSAVQHQEGGWPGP*GKAAGG Trigger: CCCTCCTGCAGCCTTGCCCCAAGGCCCTGGCCACCC...CCCCTCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGCTGAAGAGGC 61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGGTCGGGAAGCCAAGAAATTCTCGGAGACATGCACTCGGGGTTCAAAGGCTGCGCTGGGGAATTTaGTGGTGTGGAGGGGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: QLVGKPRNSRRHALGVQRLRWGI*WCGGGG Trigger: GCCACCCCCTCCACACCACCAAATTCCCCAGCGCAG...CCTTTGAACCCCGAGTGCATGTCTCCGAGAATTTCTTGGCTTCCCGACCAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR CAA 90 bp | GGGCTGTGGTACACTTTAGCAGAGATGCCTCGCTCCTGCAGGAGTTaGGCTAAGCTCCTGGTGCTACTGAAGGTTATGGTGGAGTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: GLWYTLAEMPRSCRS*AKLLVLLKVMVESL Trigger: CAGGGACTCCACCATAACCTTCAGTAGCACCAGGAGCTTAGCCAAACTCCTGCAGGAGCGAGGCATCTCTGCTAAAGTGTACCACAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR-3UTR CCA 90 bp | AAACAGCAGGGTCTGGTTTTTGAAGACCCATTTCTGCTTCTCGGCTTTTTCCGTGTGGTGTGGAGGGGGTaGCCAGGGCCTTGGGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: KQQGLVFEDPFLLLGFFRVVWRG*PGPWGK Trigger: CTTGCCCCAAGGCCCTGGCCACCCCCTCCACACCAC...ACGGAAAAAGCCGAGAAGCAGAAATGGGTCTTCAAAAACCAGACCCTGCTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCCAGCCTCTTCAGCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGGGAATTTGGTGGTGTaGAGGGGGTGGCCAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: FPASSACLPSSSSAVQHQGNLVV*RGWPGP Trigger: AGGCCCTGGCCACCCCCTCCACACCACCAAATTCCC...CTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGCTGAAGAGGCTGGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCTTCAGCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGAGGGGGAGATGCCTCGCTCCTaGAGGAGTTTGGCTAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: ASSACLPSSSSAVQHQEGEMPRS*RSLAKL Trigger: GAGCTTAGCCAAACTCCTGCAGGAGCGAGGCATCTC...CCCCTCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGCTGAAGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR-3UTR CCA 90 bp | GCACCACAGGCTGAAGGCCTAAACCCCAGCCTCAGGCCTCACTTGCTTTTCAGCTCGTGTTTGCATTCCTaGGCCACCGTATTGTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: APQAEGLNPSLRPHLLFSSCLHS*ATVLFR Trigger: TCTGAACAATACGGTGGCCCAGGAATGCAAACACGA...GCTGAAAAGCAAGTGAGGCCTGAGGCTGGGGTTTAGGCCTTCAGCCTGTGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR-3UTR CCA 90 bp | TATAGAAAACTCATATGCTCTTACCACTGTGTGGAGGCTGGCTTTTCTAACCCTTGCAGAGGCAGACCATaGCCTGCCACCTCAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: YRKLICSYHCVEAGFSNPCRGRP*PATSEH Trigger: GTGCTCTGAGGTGGCAGGCCATGGTCTGCCTCTGCA...AGGGTTAGAAAAGCCAGCCTCCACACAGTGGTAAGAGCATATGAGTTTTCTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR CAA 90 bp | TGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGAGGGGCCCTaGAAGGTCTCAAGCCATACATTTCTTGCAGGAATGTTTCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: CLPSSSSAVQHQEGP*KVSSHTFLAGMFQL Trigger: CAGCTGAAACATTCCTGCAAGAAATGTATGGCTTGAGACCTTCAAGGGCCCCTCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCTTCAGCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGAGGGGAAGCCATACATTTCTTaGAGGAATGTTTCAGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: ASSACLPSSSSAVQHQEGKPYIS*RNVSAG Trigger: ACCAGCTGAAACATTCCTGCAAGAAATGTATGGCTT...CCCCTCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGCTGAAGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTCTCCCATAAACAAACACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGCTGAGAGTGCACCATTaGATGGATGCATTTGACCAG | + |
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Preference number: 2 (lower is better) Translates to: GSPINKHPSLLLQIPRDRLRVHH*MDAFDQ Trigger: CTGGTCAAATGCATCCATCCAATGGTGCACTCTCAG...CCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGTGTTTGTTTATGGGAGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR CAA 90 bp | TCTGCTTCCAGTGGCCACTTAGGCACTGACAGAAGGACAGAATTATaGTCACCACAGAACTCCACAATCTCTAACTCAGTAGTGTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: SASSGHLGTDRRTEL*SPQNSTISNSVVWF Trigger: AAACCACACTACTGAGTTAGAGATTGTGGAGTTCTGTGGTGACAATAATTCTGTCCTTCTGTCAGTGCCTAAGTGGCCACTGGAAGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR-3UTR GCA 90 bp | GTGGAGGAAGAACTTACTGGAAAGTTCCAGTTCTTGTTATATTTTGCAGATAGTGGTCTCCACTCTCAGTaGATCTCTCTCCTTCATGTG | + |
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Preference number: 2 (lower is better) Translates to: VEEELTGKFQFLLYFADSGLHSQ*ISLLHV Trigger: CACATGAAGGAGAGAGATGCACTGAGAGTGGAGACC...ACTATCTGCAAAATATAACAAGAACTGGAACTTTCCAGTAAGTTCTTCCTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGCAAAATATTTGCAAGTTAAGCACCAAAGGACCAAGTAAAGGACCTTCTCCTCAAAGACCCTCTTaGAAACAAACGTCCTATCCC | + |
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Preference number: 2 (lower is better) Translates to: LKQNICKLSTKGPSKGPSPQRPS*KQTSYP Trigger: GGGATAGGACGTTTGTTTGCAAGAGGGTCTTTGAGG...AGAAGGTCCTTTACTTGGTCCTTTGGTGCTTAACTTGCAAATATTTTGCTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR-3UTR GCA 90 bp | GTGGAGGAAGAACTTACTGGAAAGTTCCAGTTCTTGTTATATTTTGCAGATAGTGGCTTCCCTACTCTGTaGTGTTCCTTCCTTAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: VEEELTGKFQFLLYFADSGFPTL*CSFLRS Trigger: GCTTCTAAGGAAGGAACAGCACAGAGTAGGGAAGCC...ACTATCTGCAAAATATAACAAGAACTGGAACTTTCCAGTAAGTTCTTCCTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGCAAAATATTTGCAAGTTAAGCACCAAAGGACCAAGTAAAGGACCTTCTGACGGTATCACCCACTaGCTCAGTAACAGACAACTT | + |
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Preference number: 2 (lower is better) Translates to: LKQNICKLSTKGPSKGPSDGITH*LSNRQL Trigger: AAGTTGTCTGTTACTGAGCCAGTGGGTGATACCGTC...AGAAGGTCCTTTACTTGGTCCTTTGGTGCTTAACTTGCAAATATTTTGCTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR-3UTR CCA 90 bp | GAGTCCTGTGGAGGAAGAACTTACTGGAAAGTTCCAGTTCTTGTTATATTTTGCTATCTGGGCAGTGTTTaGGTTTTCAGTGCCTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: ESCGGRTYWKVPVLVIFCYLGSV*VFSASK Trigger: CTTTGAGGCACTGAAAACCCAAACACTGCCCAGATA...GCAAAATATAACAAGAACTGGAACTTTCCAGTAAGTTCTTCCTCCACAGGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR-3UTR GCA 90 bp | TTTCTTATTTTGCTAATGCTGAGAGTGCACCATTGGATGGATGCATTTGACCAGCATTCACAGTCCTTCTaGAACATCCCTTTTCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: FLILLMLRVHHWMDAFDQHSQSF*NIPFLS Trigger: TGAGAGAAAAGGGATGTTGCAGAAGGACTGTGAATG...CTGGTCAAATGCATCCATCCAATGGTGCACTCTCAGCATTAGCAAAATAAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR-3UTR GCA 90 bp | GTGGAGGAAGAACTTACTGGAAAGTTCCAGTTCTTGTTATATTTTGCAGATAGTAACAAAACCAACAGTTaGCCCTTATCTCCTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VEEELTGKFQFLLYFADSNKTNS*PLSPPQ Trigger: CTGGGGAGGAGATAAGGGGCAACTGTTGGTTTTGTT...ACTATCTGCAAAATATAACAAGAACTGGAACTTTCCAGTAAGTTCTTCCTCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR-3UTR TCA 90 bp | GGGAGGTGGTACTCAGTTATTTATAGACTAGAAACGCAAATGCTGTTTTTAAAAAAGGACCTTCTGCCTTaGCAAACAAAACCAACAGTT | + |
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Preference number: 2 (lower is better) Translates to: GRWYSVIYRLETQMLFLKKDLLP*QTKPTV Trigger: AACTGTTGGTTTTGTTTGTCAAGGCAGAAGGTCCTT...TTTTAAAAACAGCATTTGCGTTTCTAGTCTATAAATAACTGAGTACCACCTCCC 38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR-3UTR GCA 90 bp | GTGGAGGAAGAACTTACTGGAAAGTTCCAGTTCTTGTTATATTTTGCAGATAGTTCGTTCATAAATGTGTaGATGTGTGCGATGAACTGT | + |
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Preference number: 2 (lower is better) Translates to: VEEELTGKFQFLLYFADSSFINV*MCAMNC Trigger: ACAGTTCATCGCACACATGCACACATTTATGAACGA...ACTATCTGCAAAATATAACAAGAACTGGAACTTTCCAGTAAGTTCTTCCTCCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR-3UTR TCA 90 bp | GTGGAGGAAGAACTTACTGGAAAGTTCCAGTTCTTGTTATATTTTGCAGATAGTAGGTACAATTTGTTCTaGCAGAACATCAGGATCAAT | + |
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Preference number: 2 (lower is better) Translates to: VEEELTGKFQFLLYFADSRYNLF*QNIRIN Trigger: ATTGATCCTGATGTTCTGTCAGAACAAATTGTACCT...ACTATCTGCAAAATATAACAAGAACTGGAACTTTCCAGTAAGTTCTTCCTCCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR CAA 90 bp | GAAAGTCTCATTTTTGATGTAAAGGACAAGATAAATTTTCTTATTTaGCTAATGCTGAGAGTGCACCATTGGATGGATGCATTTGACCAG | + |
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Preference number: 2 (lower is better) Translates to: ESLIFDVKDKINFLI*LMLRVHHWMDAFDQ Trigger: CTGGTCAAATGCATCCATCCAATGGTGCACTCTCAGCATTAGCAAAATAAGAAAATTTATCTTGTCCTTTACATCAAAAATGAGACTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR CCA 72 bp | CAAGGCTGCAGGAGGGGGTTTTCTGAAGCCGGGCTGTaGTACACTTTAGCAGAGATGCCTCGCTCCTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: QGCRRGFSEAGL*YTLAEMPRSCR Trigger: CCTGCAGGAGCGAGGCATCTCTGCTAAAGTGTACCACAGCCCGGCTTCAGAAAACCCCCTCCTGCAGCCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR GCA 72 bp | TCAGCTGGTCGGGAAGCCAAGAAATTCTCGGAGACATaGACTCGGGGTTCAAAGGGCAAGGGGGAGGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: SAGREAKKFSET*TRGSKGKGEEH Trigger: GTGCTCCTCCCCCTTGCCCTTTGAACCCCGAGTGCATGTCTCCGAGAATTTCTTGGCTTCCCGACCAGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR TCA 72 bp | GCTAATGCTGAGAGTGCACCATTGGATGGATGCATTTaGCCAGGGACCAGCAGGGACGGTATCACCCACTGG | + |
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Preference number: 3 (lower is better) Translates to: ANAESAPLDGCI*PGTSRDGITHW Trigger: CCAGTGGGTGATACCGTCCCTGCTGGTCCCTGGTCAAATGCATCCATCCAATGGTGCACTCTCAGCATTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR TCA 72 bp | CCTGCAGTACACTACAAGCACAGGTCTGTACACACCTaGCAGCAGACAAGGCCCCAGACGGACAACCCTAAC | + |
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Preference number: 3 (lower is better) Translates to: PAVHYKHRSVHT*QQTRPQTDNPN Trigger: GTTAGGGTTGTCCGTCTGGGGCCTTGTCTGCTGTCAGGTGTGTACAGACCTGTGCTTGTAGTGTACTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR GCA 72 bp | CCCATGCCTAGGGCCACACTTGGCAGTGGACTAGTGTaGATGCCTGCAGTACACTACAAGCACAGGTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: PMPRATLGSGLV*MPAVHYKHRSV Trigger: TACAGACCTGTGCTTGTAGTGTACTGCAGGCATGCACACTAGTCCACTGCCAAGTGTGGCCCTAGGCATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR GCA 72 bp | GGGCTGTGGTACACTTTAGCAGAGATGCCTCGCTCCTaGAGGAGTTTGGCTAAGCTCCTGGTGCTACTGAAG | + |
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Preference number: 3 (lower is better) Translates to: GLWYTLAEMPRS*RSLAKLLVLLK Trigger: CTTCAGTAGCACCAGGAGCTTAGCCAAACTCCTGCAGGAGCGAGGCATCTCTGCTAAAGTGTACCACAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR-3UTR CAA 90 bp | CCCAGCCTCTTCAGCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGACGCTCCTGCAGGAGTTaGGCTAAGCTCCTGGTGCTA | + |
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Preference number: 3 (lower is better) Translates to: PSLFSLSTKFIFSCPTSGRSCRS*AKLLVL Trigger: TAGCACCAGGAGCTTAGCCAAACTCCTGCAGGAGCG...TCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGCTGAAGAGGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTCAGGATACCCATTTTGGGTGAGGTTGTGCAAACTGGGGCTCCAAAGCTACCATCAGGAGGGGCCCTaGAAGGTCTCAAGCCATACA | + |
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Preference number: 3 (lower is better) Translates to: PSGYPFWVRLCKLGLQSYHQEGP*KVSSHT Trigger: TGTATGGCTTGAGACCTTCAAGGGCCCCTCCTGATG...GTAGCTTTGGAGCCCCAGTTTGCACAACCTCACCCAAAATGGGTATCCTGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR TCA 72 bp | AGGTTGTGCAAACTGGGGCTCCAAAGCTACCCATCATaGCCGGAAGACTCTGATTCCTCCTCAGTCCACACA | + |
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Preference number: 3 (lower is better) Translates to: RLCKLGLQSYPS*PEDSDSSSVHT Trigger: TGTGTGGACTGAGGAGGAATCAGAGTCTTCCGGTCATGATGGGTAGCTTTGGAGCCCCAGTTTGCACAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR GCA 72 bp | TTTACTGGCCCCTTAGCCCCAGGCTTCCCTACTCTGTaGTGTTCCTTCCTTAGAAGCTGTAACTGTCCAAGT | + |
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Preference number: 3 (lower is better) Translates to: FTGPLAPGFPTL*CSFLRSCNCPS Trigger: ACTTGGACAGTTACAGCTTCTAAGGAAGGAACAGCACAGAGTAGGGAAGCCTGGGGCTAAGGGGCCAGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR CCA 72 bp | AAGTTGTGTTCCAGATATGACACAATAGCATTTTCCTaGAGCCCCCGGGATCCCATGCCTAGGGCCACACTT | + |
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Preference number: 3 (lower is better) Translates to: KLCSRYDTIAFS*SPRDPMPRATL Trigger: AAGTGTGGCCCTAGGCATGGGATCCCGGGGGCTCCAGGAAAATGCTATTGTGTCATATCTGGAACACAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR GCA 72 bp | AAAGGACCTTCTGCCTTGACAAACAAAACCAACAGTTaGCCCTTATCTCCTCCCCAGGTGCTTGAACAACCC | + |
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Preference number: 3 (lower is better) Translates to: KGPSALTNKTNS*PLSPPQVLEQP Trigger: GGGTTGTTCAAGCACCTGGGGAGGAGATAAGGGGCAACTGTTGGTTTTGTTTGTCAAGGCAGAAGGTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR-3UTR CAA 90 bp | ATAAACTGCCACCTGAATTTAAATAAACAGCAGGGTCTGGTTTTTGAAGACCCAACTGCGCTGGGGAATTaGGTGGTGTGGAGGGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: INCHLNLNKQQGLVFEDPTALGN*VVWRGW Trigger: CCACCCCCTCCACACCACCAAATTCCCCAGCGCAGT...TGGGTCTTCAAAAACCAGACCCTGCTGTTTATTTAAATTCAGGTGGCAGTTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR CCA 72 bp | TCTCAAGCCATACATTTCTTGCAGGAATGTTTCAGCTaGTCGGGAAGCCAAGAAATTCTCGGAGACATGCAC | + |
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Preference number: 3 (lower is better) Translates to: SQAIHFLQECFS*SGSQEILGDMH Trigger: GTGCATGTCTCCGAGAATTTCTTGGCTTCCCGACCAGCTGAAACATTCCTGCAAGAAATGTATGGCTTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR TCA 72 bp | TTCTCAGGCTGTACCCAAATCATCTTAGGTGGAAACTaGAAGTCAGCAAGGCCCAGCTTTAGACAGGATTCA | + |
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Preference number: 3 (lower is better) Translates to: FSGCTQIILGGN*KSARPSFRQDS Trigger: TGAATCCTGTCTAAAGCTGGGCCTTGCTGACTTTCAGTTTCCACCTAAGATGATTTGGGTACAGCCTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR CCA 72 bp | AATTTTCTTATTTTGCTAATGCTGAGAGTGCACCATTaGATGGATGCATTTGACCAGGGACCAGCAGGGACG | + |
|
Preference number: 3 (lower is better) Translates to: NFLILLMLRVHH*MDAFDQGPAGT Trigger: CGTCCCTGCTGGTCCCTGGTCAAATGCATCCATCCAATGGTGCACTCTCAGCATTAGCAAAATAAGAAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| 3UTR GCA 72 bp | GCATCCAAGGAAAACGGAGAAACACACAATCGTGTTTaGATTCCTGGGCCACCGTATTGTTCAGAAGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: ASKENGETHNRV*IPGPPYCSEEI Trigger: TATTTCTTCTGAACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGTTTTCCTTGGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| 3UTR GCA 72 bp | CCCAGCTTTAGACAGGATTCATTTCAGCGACAAACATaGACAGGTACAATTTGTTCTGACAGAACATCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PSFRQDSFQRQT*TGTICSDRTSG Trigger: TCCTGATGTTCTGTCAGAACAAATTGTACCTGTGCATGTTTGTCGCTGAAATGAATCCTGTCTAAAGCTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| 3UTR GCA 72 bp | GAAGACTCTGATTCCTCCTCAGTCCACACAATAAACTaGCACCTGAATTTAAATAAACAGCAGGGTCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: EDSDSSSVHTIN*HLNLNKQQGLV Trigger: AACCAGACCCTGCTGTTTATTTAAATTCAGGTGGCAGTTTATTGTGTGGACTGAGGAGGAATCAGAGTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGGTGGTACTCAGTTATTTATAGACTAGAAACGCAAATGCTGTTTTTAAAAATTGGATGGATGCATTaGACCAGGGACCAGCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GRWYSVIYRLETQMLFLKIGWMH*TRDQQG Trigger: TCCCTGCTGGTCCCTGGTCAAATGCATCCATCCAAT...TTTTAAAAACAGCATTTGCGTTTCTAGTCTATAAATAACTGAGTACCACCTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCCTGTGGAGGAAGAACTTACTGGAAAGTTCCAGTTCTTGTTATATTTTGCTCCTGGGCCACCGTATaGTTCAGAAGAAATATCCTA | + |
|
Preference number: 3 (lower is better) Translates to: ESCGGRTYWKVPVLVIFCSWATV*FRRNIL Trigger: TAGGATATTTCTTCTGAACAATACGGTGGCCCAGGA...GCAAAATATAACAAGAACTGGAACTTTCCAGTAAGTTCTTCCTCCACAGGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| 3UTR TCA 72 bp | TTTTTCAGGAACCAAGGCAAAGCTTTAAGGTCCTGCTaGGGGAGGTGGTACTCAGTTATTTATAGACTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FFRNQGKALRSC*GRWYSVIYRLE Trigger: TTCTAGTCTATAAATAACTGAGTACCACCTCCCTCAGCAGGACCTTAAAGCTTTGCCTTGGTTCCTGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| 3UTR CCA 72 bp | GGAAAACGGAGAAACACACAATCGTGTTTGCATTCCTaGGCCACCGTATTGTTCAGAAGAAATATCCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GKRRNTQSCLHS*ATVLFRRNILK Trigger: TTTTAGGATATTTCTTCTGAACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGTTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| 3UTR TCA 72 bp | TTTCTATTCACTATTTCCAAGGCAAGGAAACGTAGCTaGAGGAGCAAACTAACCCTTTCTTCCATTTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FLFTISKARKRS*RSKLTLSSICL Trigger: GAGACAAATGGAAGAAAGGGTTAGTTTGCTCCTTCAGCTACGTTTCCTTGCCTTGGAAATAGTGAATAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| 3UTR CCA 72 bp | GAAGATTTAGTAATCATAAATACCAAGGAATCTATCTaGGCAGTGTTTGGGTTTTCAGTGCCTCAAAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: EDLVIINTKESI*AVFGFSVPQSP Trigger: GGGACTTTGAGGCACTGAAAACCCAAACACTGCCCAGATAGATTCCTTGGTATTTATGATTACTAAATCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| 3UTR-3UTR CAA 90 bp | GTGGAGGAAGAACTTACTGGAAAGTTCCAGTTCTTGTTATATTTTGCAGATAGTAACCCTTTCTTCCATTaGTCTCCAAACTGGTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: VEEELTGKFQFLLYFADSNPFFH*SPNWSS Trigger: TGATGACCAGTTTGGAGACAAATGGAAGAAAGGGTT...ACTATCTGCAAAATATAACAAGAACTGGAACTTTCCAGTAAGTTCTTCCTCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| 3UTR CCA 72 bp | AATCATAAATACCAAGGAATCTATCTGGGCAGTGTTTaGGTTTTCAGTGCCTCAAAGTCCCCAAATAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NHKYQGIYLGSV*VFSASKSPNKK Trigger: TTTCTTATTTGGGGACTTTGAGGCACTGAAAACCCAAACACTGCCCAGATAGATTCCTTGGTATTTATGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| 3UTR CCA 72 bp | ATAACAAAAACAAAACGAGAACAGTTAAGAGTCCTGTaGAGGAAGAACTTACTGGAAAGTTCCAGTTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ITKTKREQLRVL*RKNLLESSSSC Trigger: ACAAGAACTGGAACTTTCCAGTAAGTTCTTCCTCCACAGGACTCTTAACTGTTCTCGTTTTGTTTTTGTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| 3UTR TCA 72 bp | TATATAAATATACAACATAATCTACTGCCTACTGACTaGTTGCACTTCTGGTTTAAACCCTTCTGGCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: YINIQHNLLPTD*LHFWFKPFWHP Trigger: TGGATGCCAGAAGGGTTTAAACCAGAAGTGCAATCAGTCAGTAGGCAGTAGATTATGTTGTATATTTATATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR TCA 90 bp | GCACCACAGGCTGAAGGCCTAAACCCCAGCCTCAGGCCTCACTTGCTTTTCAGCGCAGGACTGGGAAGGTaGCAGAGCGGCCCCGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: APQAEGLNPSLRPHLLFSAGLGR*QSGPEC Trigger: ACACTCGGGGCCGCTCTGTCACCTTCCCAGTCCTGC...GCTGAAAAGCAAGTGAGGCCTGAGGCTGGGGTTTAGGCCTTCAGCCTGTGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR TCA 90 bp | GCAAGGGGGAGGAGCACGGTGACTGCGCTGGGGAATTTGGTGGTGTGGAGGGGGCTTCTTCCAGCTCCCTaGGCTTCTCATGCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: ARGRSTVTALGNLVVWRGLLPAP*ASHAAC Trigger: ACATGCTGCATGAGAAGCTCAGGGAGCTGGAAGAAG...CCCCCTCCACACCACCAAATTCCCCAGCGCAGTCACCGTGCTCCTCCCCCTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCGGGAAGCCAAGAAATTCTCGGAGACATGCACTCGGGGTTCAAAGGGCGAAGGCAGCTGGCACTaGCGAGGTCCGTGGTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AGREAKKFSETCTRGSKGEGSWH*RGPWSP Trigger: CGGAGACCACGGACCTCGGCAGTGCCAGCTGCCTTC...GCCCTTTGAACCCCGAGTGCATGTCTCCGAGAATTTCTTGGCTTCCCGACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCCTTCCTAGGCAGGCGCTTCCGGCTTGTGTTCTCTAGGGACAAAGGTGCTGTGGTGTGGAGGGGGTaGCCAGGGCCTTGGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSFLGRRFRLVFSRDKGAVVWRG*PGPWGK Trigger: CTTGCCCCAAGGCCCTGGCCACCCCCTCCACACCAC...AGCACCTTTGTCCCTAGAGAACACAAGCCGGAAGCGCCTGCCTAGGAAGGAAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCAGGAGGGGGTTTTCTGAAGCCGGGCTGTGGTACACTTTAGCAGGGCGTCACAGCTGCTaGCTTCTTCCTCCTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQGCRRGFSEAGLWYTLAGRHSC*LLPPAQ Trigger: CTGAGCAGGAGGAAGAAGTCAGCAGCTGTGACGCCC...TGCTAAAGTGTACCACAGCCCGGCTTCAGAAAACCCCCTCCTGCAGCCTTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTGGTGCTACTGAAGGTTATGGTGGAGTCCCTGCGGTTTGTGATGGATTCGGCAGGACTGGGAAGGTaGCAGAGCGGCCCCGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLVLLKVMVESLRFVMDSAGLGR*QSGPEC Trigger: ACACTCGGGGCCGCTCTGTCACCTTCCCAGTCCTGC...CGAATCCATCACAAACCGCAGGGACTCCACCATAACCTTCAGTAGCACCAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR GCA 90 bp | GTTTCCTTCCTAGGCAGGCGCTTCCGGCTTGTGTTCTCTAGGGACAAAGGTGCTCTGGAACCTCTGTGCTaGCCCCTGGGCTCAGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSFLGRRFRLVFSRDKGALEPLC*PLGSGV Trigger: CACTCCTGAGCCCAGGGGGCAGCACAGAGGTTCCAG...AGCACCTTTGTCCCTAGAGAACACAAGCCGGAAGCGCCTGCCTAGGAAGGAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCGGGAAGCCAAGAAATTCTCGGAGACATGCACTCGGGGTTCAAAGGGCCTCTTCAGCAAGGACTaGGGAGAGGGTCTCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: AGREAKKFSETCTRGSKGLFSKD*GEGLRR Trigger: GCGCCTGAGACCCTCTCCCCAGTCCTTGCTGAAGAG...GCCCTTTGAACCCCGAGTGCATGTCTCCGAGAATTTCTTGGCTTCCCGACCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCCTTCCTAGGCAGGCGCTTCCGGCTTGTGTTCTCTAGGGACAAAGGTGCTGGGAATTTGGTGGTGTaGAGGGGGTGGCCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSFLGRRFRLVFSRDKGAGNLVV*RGWPGP Trigger: AGGCCCTGGCCACCCCCTCCACACCACCAAATTCCC...AGCACCTTTGTCCCTAGAGAACACAAGCCGGAAGCGCCTGCCTAGGAAGGAAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR TCA 90 bp | GCCTCTTCAGCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGAGGGGACCTGGTCCACCCGCTaGGGTCATGGGCGGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASSACLPSSSSAVQHQEGTWSTR*GHGRQK Trigger: TTTCTGCCGCCCATGACCTCAGCGGGTGGACCAGGT...CCCCTCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGCTGAAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR GCA 90 bp | GCCGGGCTGTGGTACACTTTAGCAGAGATGCCTCGCTCCTGCAGGAGTTTGGCTGTCTCAGGCGCATCCTaGTGCTGGTGTGATGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGLWYTLAEMPRSCRSLAVSGAS*CWCDDC Trigger: ACAGTCATCACACCAGCAGCAGGATGCGCCTGAGAC...AGCCAAACTCCTGCAGGAGCGAGGCATCTCTGCTAAAGTGTACCACAGCCCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGGAGTTTGGCTAAGCTCCTGGTGCTACTGAAGGTTATGGTGGAGTCCCTGGGGCTGCGAGTTTCCTaGAACCTCTGTGCTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CRSLAKLLVLLKVMVESLGLRVS*NLCAAP Trigger: GGGGGCAGCACAGAGGTTCCAGGAAACTCGCAGCCC...CAGGGACTCCACCATAACCTTCAGTAGCACCAGGAGCTTAGCCAAACTCCTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CCA 90 bp | GCACCACAGGCTGAAGGCCTAAACCCCAGCCTCAGGCCTCACTTGCTTTTCAGCGCTCCTGCAGGAGTTTaGCTAAGCTCCTGGTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: APQAEGLNPSLRPHLLFSAPAGV*LSSWCY Trigger: GTAGCACCAGGAGCTTAGCCAAACTCCTGCAGGAGC...GCTGAAAAGCAAGTGAGGCCTGAGGCTGGGGTTTAGGCCTTCAGCCTGTGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR TCA 90 bp | CTCTTCAGCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGAGGGGCCCTGGTCAGTGCAGACTaGGGCAAGGTTCTCCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFSLSTKFIFSCPTSGGALVSAD*GKVLRG Trigger: CCCACGGAGAACCTTGCCTCAGTCTGCACTGACCAG...GGCCCCTCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGCTGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR GCA 90 bp | GGGCAAGGCTGCAGGAGGGGGTTTTCTGAAGCCGGGCTGTGGTACACTTTAGCACTCAGGCTGAGGCGATaGAATGCAGTAGCCAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: GQGCRRGFSEAGLWYTLALRLRR*NAVARS Trigger: TGATCTGGCTACTGCATTGCATCGCCTCAGCCTGAG...TGCTAAAGTGTACCACAGCCCGGCTTCAGAAAACCCCCTCCTGCAGCCTTGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CCA 90 bp | CATCCAAGGAAAACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTAGCCTCGAAGGCAGCTaGCACTGCCGAGGTCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HPRKTEKHTIVFAFLGHRSLEGS*HCRGPW Trigger: CCACGGACCTCGGCAGTGCCAGCTGCCTTCGAGGCT...ACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGTTTTCCTTGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR GCA 90 bp | GCTAAGCTCCTGGTGCTACTGAAGGTTATGGTGGAGTCCCTGCGGTTTGTGATGTCAGGCGCATCCTGCTaGTGGTGTGATGACTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AKLLVLLKVMVESLRFVMSGASC*WCDDCA Trigger: GGCACAGTCATCACACCAGCAGCAGGATGCGCCTGA...CATCACAAACCGCAGGGACTCCACCATAACCTTCAGTAGCACCAGGAGCTTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR GCA 90 bp | ACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTATTGTTCAGAAGGAAGGCAGCTGGCACTaGCGAGGTCCGTGGTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TEKHTIVFAFLGHRIVQKEGSWH*RGPWSP Trigger: CGGAGACCACGGACCTCGGCAGTGCCAGCTGCCTTC...CTTCTGAACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR GCA 90 bp | GCTAAGCTCCTGGTGCTACTGAAGGTTATGGTGGAGTCCCTGCGGTTTGTGATGAGCTGCTCGCACTACTaGCACAGGCCAGTGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AKLLVLLKVMVESLRFVMSCSHY*HRPVMG Trigger: TCCCATCACTGGCCTGTGGCAGTAGTGCGAGCAGCT...CATCACAAACCGCAGGGACTCCACCATAACCTTCAGTAGCACCAGGAGCTTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGAGGGGCCCTTGAAGATCTTCAGGGGATCCTaGGGGGTTTGTGGGCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ACLPSSSSAVQHQEGPLKIFRGS*GVCGLR Trigger: TCGCAGCCCACAAACCCCCCAGGATCCCCTGAAGAT...CTTCAAGGGCCCCTCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR TCA 90 bp | TGCAGGAGTTTGGCTAAGCTCCTGGTGCTACTGAAGGTTATGGTGGAGTCCCTGAGCTGCAGCAGCCCCTaGGATAAGCTGAAGGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: CRSLAKLLVLLKVMVESLSCSSP*DKLKDS Trigger: TGAGTCCTTCAGCTTATCTCAGGGGCTGCTGCAGCT...CAGGGACTCCACCATAACCTTCAGTAGCACCAGGAGCTTAGCCAAACTCCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR TCA 90 bp | GCCTCTTCAGCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGAGGGGGTAACTTCTCTGGCATaGAGCCTCGAAGGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASSACLPSSSSAVQHQEGVTSLA*SLEGSW Trigger: CCAGCTGCCTTCGAGGCTTCATGCCAGAGAAGTTAC...CCCCTCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGCTGAAGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR TCA 90 bp | GCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGAGGGGCCCTTGAAGGCAAGCTGCTGCCAGTaGTGCAGAGTCTGTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ACLPSSSSAVQHQEGPLKASCCQ*CRVCDP Trigger: AGGATCACAGACTCTGCATCACTGGCAGCAGCTTGC...CTTCAAGGGCCCCTCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR TCA 90 bp | CATCCAAGGAAAACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTACTGCCACAGGCCAGTaGTGGGAAACCGGAGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPRKTEKHTIVFAFLGHRTATGQ*WETGAR Trigger: CCTAGCTCCGGTTTCCCATCACTGGCCTGTGGCAGT...ACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGTTTTCCTTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR TCA 90 bp | CCTTCAGGATACCCATTTTGGGTGAGGTTGTGCAAACTGGGGCTCCAAAGCTACACTGCCACAGGCCAGTaGTGGGAAACCGGAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PSGYPFWVRLCKLGLQSYTATGQ*WETGAV Trigger: TACAGCTCCGGTTTCCCATCACTGGCCTGTGGCAGT...GTAGCTTTGGAGCCCCAGTTTGCACAACCTCACCCAAAATGGGTATCCTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCTTCAGCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGAGGGGTCCCTGAGCTTCTCATaGAGCATGTCCAGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSACLPSSSSAVQHQEGSLSFS*SMSSCS Trigger: GCTGCAGCTGGACATGCTGCATGAGAAGCTCAGGGA...CCCCTCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGCTGAAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGAGGGGCCCTTGAAGTTGTCCTCTGCTGGCTaGACACCAGACTCAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ACLPSSSSAVQHQEGPLKLSSAG*TPDSKG Trigger: GCCCTTTGAGTCTGGTGTCCAGCCAGCAGAGGACAA...CTTCAAGGGCCCCTCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CCA 90 bp | CCGGAAGACTCTGATTCCTCCTCAGTCCACACAATAAACTGCCACCTGAATTTAAGCCTCGAAGGCAGCTaGCACTGCCGAGGTCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PEDSDSSSVHTINCHLNLSLEGS*HCRGPW Trigger: CCACGGACCTCGGCAGTGCCAGCTGCCTTCGAGGCT...TAAATTCAGGTGGCAGTTTATTGTGTGGACTGAGGAGGAATCAGAGTCTTCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CCA 90 bp | TATAGAAAACTCATATGCTCTTACCACTGTGTGGAGGCTGGCTTTTCTAACCCTGGGTGGCCAGGGCCTTaGGGCAAGGCTGCAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YRKLICSYHCVEAGFSNPGWPGP*GKAAGG Trigger: CCCTCCTGCAGCCTTGCCCCAAGGCCCTGGCCACCC...AGGGTTAGAAAAGCCAGCCTCCACACAGTGGTAAGAGCATATGAGTTTTCTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR TCA 90 bp | GCCGGGCTGTGGTACACTTTAGCAGAGATGCCTCGCTCCTGCAGGAGTTTGGCTGTTTCTGTCTTGATATaGCAAGCCTTGGATCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGLWYTLAEMPRSCRSLAVSVLI*QALDRR Trigger: CCTACGATCCAAGGCTTGTCATATCAAGACAGAAAC...AGCCAAACTCCTGCAGGAGCGAGGCATCTCTGCTAAAGTGTACCACAGCCCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR GCA 90 bp | GCCGGGCTGTGGTACACTTTAGCAGAGATGCCTCGCTCCTGCAGGAGTTTGGCTCAGAAGGGCCGGACTTaGTACGAAGCTCTTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: AGLWYTLAEMPRSCRSLAQKGRT*YEALLF Trigger: AAATAAAAGAGCTTCGTAGCAAGTCCGGCCCTTCTG...AGCCAAACTCCTGCAGGAGCGAGGCATCTCTGCTAAAGTGTACCACAGCCCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR GCA 90 bp | CCGGAAGACTCTGATTCCTCCTCAGTCCACACAATAAACTGCCACCTGAATTTACTGGAACCTCTGTGCTaGCCCCTGGGCTCAGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PEDSDSSSVHTINCHLNLLEPLC*PLGSGV Trigger: CACTCCTGAGCCCAGGGGGCAGCACAGAGGTTCCAG...TAAATTCAGGTGGCAGTTTATTGTGTGGACTGAGGAGGAATCAGAGTCTTCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CCA 90 bp | GCCGGGCTGTGGTACACTTTAGCAGAGATGCCTCGCTCCTGCAGGAGTTTGGCTTCAGCTTTTTACGCATaGTCCCTTCAATCTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGLWYTLAEMPRSCRSLASAFYA*SLQSQL Trigger: CAGCTGAGATTGAAGGGACCATGCGTAAAAAGCTGA...AGCCAAACTCCTGCAGGAGCGAGGCATCTCTGCTAAAGTGTACCACAGCCCGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGCAGGTGCTTTAATGTACACGGGCTGCGAGTTTCCTaGAACCTCTGTGCTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLLYFCRYQETGRCFNVHGLRVS*NLCAAP Trigger: GGGGGCAGCACAGAGGTTCCAGGAAACTCGCAGCCC...GTGTACATTAAAGCACCTGCCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CCA 90 bp | GCTAAGCTCCTGGTGCTACTGAAGGTTATGGTGGAGTCCCTGCGGTTTGTGATGGGCGTGGATCAAGAATaGTTCCCAAGTTCGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AKLLVLLKVMVESLRFVMGVDQE*FPSSAE Trigger: CTCAGCCGAACTTGGGAACCATTCTTGATCCACGCC...CATCACAAACCGCAGGGACTCCACCATAACCTTCAGTAGCACCAGGAGCTTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| CDS-3UTR CCA 90 bp | TGCAGGAGTTTGGCTAAGCTCCTGGTGCTACTGAAGGTTATGGTGGAGTCCCTGGATGACGCCTGGGCGTaGATCAAGAATGGTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CRSLAKLLVLLKVMVESLDDAWA*IKNGSQ Trigger: TTGGGAACCATTCTTGATCCACGCCCAGGCGTCATC...CAGGGACTCCACCATAACCTTCAGTAGCACCAGGAGCTTAGCCAAACTCCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| CDS-3UTR GCA 90 bp | ACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTATTGTTCAGAAGTCAGGCGCATCCTGCTaGTGGTGTGATGACTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TEKHTIVFAFLGHRIVQKSGASC*WCDDCA Trigger: GGCACAGTCATCACACCAGCAGCAGGATGCGCCTGA...CTTCTGAACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR GCA 90 bp | CATCCAAGGAAAACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTGAGATGCCTCGCTCCTaGAGGAGTTTGGCTAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HPRKTEKHTIVFAFLGHREMPRS*RSLAKL Trigger: GAGCTTAGCCAAACTCCTGCAGGAGCGAGGCATCTC...ACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGTTTTCCTTGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CCA 90 bp | GTTTCCTTCCTAGGCAGGCGCTTCCGGCTTGTGTTCTCTAGGGACAAAGGTGCTTGTTTTGTCCTCTGCTaGCTGGACACCAGACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSFLGRRFRLVFSRDKGACFVLC*LDTRLK Trigger: TTTGAGTCTGGTGTCCAGCCAGCAGAGGACAAAACA...AGCACCTTTGTCCCTAGAGAACACAAGCCGGAAGCGCCTGCCTAGGAAGGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR TCA 90 bp | CAGCTGGTCGGGAAGCCAAGAAATTCTCGGAGACATGCACTCGGGGTTCAAAGGCTCTCCGAGTCTCTATaGTTGCTACTCATGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLVGKPRNSRRHALGVQRLSESL*LLLMRF Trigger: AAACCTCATGAGTAGCAATCATAGAGACTCGGAGAG...CCTTTGAACCCCGAGTGCATGTCTCCGAGAATTTCTTGGCTTCCCGACCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| CDS-3UTR TCA 90 bp | ACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTATTGTTCAGAAGAGCTGCAGCAGCCCCTaGGATAAGCTGAAGGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: TEKHTIVFAFLGHRIVQKSCSSP*DKLKDS Trigger: TGAGTCCTTCAGCTTATCTCAGGGGCTGCTGCAGCT...CTTCTGAACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR TCA 90 bp | GCCTCTTCAGCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGAGGGGTTGGAAGCCTGCAGGTaGAGTCTTAGTTCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASSACLPSSSSAVQHQEGLEACR*SLSSSF Trigger: GAAGGAAGAACTAAGACTTCACCTGCAGGCTTCCAA...CCCCTCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGCTGAAGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| CDS-3UTR TCA 90 bp | CCTTCAGGATACCCATTTTGGGTGAGGTTGTGCAAACTGGGGCTCCAAAGCTACTGTCATGATGACACTTaGACGGTTGGAGCCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSGYPFWVRLCKLGLQSYCHDDT*TVGAWD Trigger: ATCCCAGGCTCCAACCGTTCAAGTGTCATCATGACA...GTAGCTTTGGAGCCCCAGTTTGCACAACCTCACCCAAAATGGGTATCCTGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR TCA 90 bp | ACAAACACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGCAGGTGCTTTAATGGGCGTCACAGCTGCTaGCTTCTTCCTCCTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TNTLLYFCRYQETGRCFNGRHSC*LLPPAQ Trigger: CTGAGCAGGAGGAAGAAGTCAGCAGCTGTGACGCCC...ATTAAAGCACCTGCCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGTGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR TCA 90 bp | GGCTCTCCCATAAACAAACACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGGTAACTTCTCTGGCATaGAGCCTCGAAGGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSPINKHPSLLLQIPRDRVTSLA*SLEGSW Trigger: CCAGCTGCCTTCGAGGCTTCATGCCAGAGAAGTTAC...CCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGTGTTTGTTTATGGGAGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR TCA 90 bp | GGCTCTCCCATAAACAAACACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGGCAAGCTGCTGCCAGTaGTGCAGAGTCTGTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSPINKHPSLLLQIPRDRASCCQ*CRVCDP Trigger: AGGATCACAGACTCTGCATCACTGGCAGCAGCTTGC...CCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGTGTTTGTTTATGGGAGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR TCA 90 bp | CTCCTGGTGCTACTGAAGGTTATGGTGGAGTCCCTGCGGTTTGTGATGGATTCGGCTGAACCTGAAAAGTaGTGCCCTCTTCTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLVLLKVMVESLRFVMDSAEPEK*CPLLHP Trigger: AGGATGAAGAAGAGGGCATCACTTTTCAGGTTCAGC...CGAATCCATCACAAACCGCAGGGACTCCACCATAACCTTCAGTAGCACCAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| CDS-3UTR TCA 90 bp | ACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTATTGTTCAGAAGGAGCTAGGGGTGACCTaGGTGATGTCAGAGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: TEKHTIVFAFLGHRIVQKELGVT*VMSEGC Trigger: ACATCCCTCTGACATCACTCAGGTCACCCCTAGCTC...CTTCTGAACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR GCA 90 bp | CATCCAAGGAAAACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTCTCAGGCTGAGGCGATaGAATGCAGTAGCCAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: HPRKTEKHTIVFAFLGHRLRLRR*NAVARS Trigger: TGATCTGGCTACTGCATTGCATCGCCTCAGCCTGAG...ACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGTTTTCCTTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CCA 90 bp | ACAAACACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGCAGGTGCTTTAATCTCTTCAGCAAGGACTaGGGAGAGGGTCTCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TNTLLYFCRYQETGRCFNLFSKD*GEGLRR Trigger: GCGCCTGAGACCCTCTCCCCAGTCCTTGCTGAAGAG...ATTAAAGCACCTGCCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGTGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CCA 90 bp | CATCCAAGGAAAACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTATTGTCAGCTGTCGCTaGGCATCTTTGGAAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HPRKTEKHTIVFAFLGHRIVSCR*ASLEAC Trigger: GCAGGCTTCCAAAGATGCCCAGCGACAGCTGACAAT...ACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGTTTTCCTTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CCA 90 bp | GCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGAGGGGCCCTTGAAGTGTTTTGTCCTCTGCTaGCTGGACACCAGACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ACLPSSSSAVQHQEGPLKCFVLC*LDTRLK Trigger: TTTGAGTCTGGTGTCCAGCCAGCAGAGGACAAAACA...CTTCAAGGGCCCCTCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAAACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTATTGTTCTCTGTGCTGCCCCCTaGGCTCAGGAGTGTTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKTEKHTIVFAFLGHRIVLCAAP*AQECFV Trigger: GACAAAACACTCCTGAGCCCAGGGGGCAGCACAGAG...AACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGTTTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CCA 90 bp | AAACAGCAGGGTCTGGTTTTTGAAGACCCATTTCTGCTTCTCGGCTTTTTCCGTCTCTGTGCTGCCCCCTaGGCTCAGGAGTGTTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KQQGLVFEDPFLLLGFFRLCAAP*AQECFV Trigger: GACAAAACACTCCTGAGCCCAGGGGGCAGCACAGAG...ACGGAAAAAGCCGAGAAGCAGAAATGGGTCTTCAAAAACCAGACCCTGCTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| CDS-3UTR CCA 90 bp | ACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGCAGGTGCTTTAATGTACACATCTTCAGGGGATCCTaGGGGGTTTGTGGGCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TLLYFCRYQETGRCFNVHIFRGS*GVCGLR Trigger: TCGCAGCCCACAAACCCCCCAGGATCCCCTGAAGAT...GTGTACATTAAAGCACCTGCCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CCA 90 bp | CTCCTGGTGCTACTGAAGGTTATGGTGGAGTCCCTGCGGTTTGTGATGGATTCGTTTAGTGATGACGCCTaGGCGTGGATCAAGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLVLLKVMVESLRFVMDSFSDDA*AWIKNG Trigger: ACCATTCTTGATCCACGCCCAGGCGTCATCACTAAA...CGAATCCATCACAAACCGCAGGGACTCCACCATAACCTTCAGTAGCACCAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| CDS-3UTR CCA 90 bp | CCTTCAGGATACCCATTTTGGGTGAGGTTGTGCAAACTGGGGCTCCAAAGCTACAAAGATTCCCGTTACTaGCGTGGGCAGTGCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSGYPFWVRLCKLGLQSYKDSRY*RGQCRF Trigger: AAACCTGCACTGCCCACGCCAGTAACGGGAATCTTT...GTAGCTTTGGAGCCCCAGTTTGCACAACCTCACCCAAAATGGGTATCCTGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| 3UTR CAA 72 bp | TACACTTTAGCAGAGATGCCTCGCTCCTGCAGGAGTTaGGCTAAGCTCCTGGTGCTACTGAAGGTTATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YTLAEMPRSCRS*AKLLVLLKVMV Trigger: CACCATAACCTTCAGTAGCACCAGGAGCTTAGCCAAACTCCTGCAGGAGCGAGGCATCTCTGCTAAAGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| CDS-3UTR TCA 90 bp | GTTTCCTTCCTAGGCAGGCGCTTCCGGCTTGTGTTCTCTAGGGACAAAGGTGCTTATGATTGCTACTCATaGGGTTTGCTTCACCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSFLGRRFRLVFSRDKGAYDCYS*GLLHLF Trigger: GAACAGGTGAAGCAAACCTCATGAGTAGCAATCATA...AGCACCTTTGTCCCTAGAGAACACAAGCCGGAAGCGCCTGCCTAGGAAGGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR TCA 90 bp | TTTCTTATTTTGCTAATGCTGAGAGTGCACCATTGGATGGATGCATTTGACCAGACCTGGTCCACCCGCTaGGGTCATGGGCGGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLILLMLRVHHWMDAFDQTWSTR*GHGRQK Trigger: TTTCTGCCGCCCATGACCTCAGCGGGTGGACCAGGT...CTGGTCAAATGCATCCATCCAATGGTGCACTCTCAGCATTAGCAAAATAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR GCA 90 bp | ACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGCAGGTGCTTTAATGTACACTCCCTGAGCTTCTCATaGAGCATGTCCAGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLLYFCRYQETGRCFNVHSLSFS*SMSSCS Trigger: GCTGCAGCTGGACATGCTGCATGAGAAGCTCAGGGA...GTGTACATTAAAGCACCTGCCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CCA 90 bp | ACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTATTGTTCAGAAGGGCGTGGATCAAGAATaGTTCCCAAGTTCGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TEKHTIVFAFLGHRIVQKGVDQE*FPSSAE Trigger: CTCAGCCGAACTTGGGAACCATTCTTGATCCACGCC...CTTCTGAACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CCA 90 bp | ACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTATTGTTCAGAAGAGTTCACAGCCGTGTTaGATGAGCTGCTCGCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: TEKHTIVFAFLGHRIVQKSSQPC*MSCSHY Trigger: GTAGTGCGAGCAGCTCATCCAACACGGCTGTGAACT...CTTCTGAACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CCA 90 bp | TTTCTTATTTTGCTAATGCTGAGAGTGCACCATTGGATGGATGCATTTGACCAGCTGCGCTGGGGAATTTaGTGGTGTGGAGGGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLILLMLRVHHWMDAFDQLRWGI*WCGGGG Trigger: GCCACCCCCTCCACACCACCAAATTCCCCAGCGCAG...CTGGTCAAATGCATCCATCCAATGGTGCACTCTCAGCATTAGCAAAATAAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR TCA 90 bp | CTCTTCAGCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGAGGGGCCTGCTTCACCTGTTCGTaGTTTGAAAATGGCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFSLSTKFIFSCPTSGGACFTCS*FENGIL Trigger: CAGAATGCCATTTTCAAATCACGAACAGGTGAAGCA...GGCCCCTCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGCTGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| CDS-3UTR TCA 90 bp | CCCAGCCTCTTCAGCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGATGTCATTGGCAACCTTaGCAGTATCAAACACCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSLFSLSTKFIFSCPTSGCHWQP*QYQTPV Trigger: AACGGGTGTTTGATACTGTCAAGGTTGCCAATGACA...TCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGCTGAAGAGGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| CDS-3UTR TCA 90 bp | AGGAAAACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTATTGTTGATACCCATTTTGGGTaGGGTTGTGCAAACTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKTEKHTIVFAFLGHRIVDTHFG*GCANWG Trigger: GCCCCAGTTTGCACAACCTCACCCAAAATGGGTATC...AACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGTTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR GCA 90 bp | GGCTCTCCCATAAACAAACACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGTTTTGGGTGAGGTTGTaGAAACTGGGGCTCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSPINKHPSLLLQIPRDRFWVRL*KLGLQS Trigger: GCTTTGGAGCCCCAGTTTGCACAACCTCACCCAAAA...CCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGTGTTTGTTTATGGGAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CCA 90 bp | CCGGAAGACTCTGATTCCTCCTCAGTCCACACAATAAACTGCCACCTGAATTTAATTGTCAGCTGTCGCTaGGCATCTTTGGAAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PEDSDSSSVHTINCHLNLIVSCR*ASLEAC Trigger: GCAGGCTTCCAAAGATGCCCAGCGACAGCTGACAAT...TAAATTCAGGTGGCAGTTTATTGTGTGGACTGAGGAGGAATCAGAGTCTTCCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| CDS-3UTR CCA 90 bp | AGGAAAACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTATTGTTGATGACGCCTGGGCGTaGATCAAGAATGGTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RKTEKHTIVFAFLGHRIVDDAWA*IKNGSQ Trigger: TTGGGAACCATTCTTGATCCACGCCCAGGCGTCATC...AACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGTTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR TCA 90 bp | CCTTCAGGATACCCATTTTGGGTGAGGTTGTGCAAACTGGGGCTCCAAAGCTACCACCTGTTCGTGATTTaGAAATGGCATTCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: PSGYPFWVRLCKLGLQSYHLFVI*KWHSGI Trigger: AATCCCAGAATGCCATTTTCAAATCACGAACAGGTG...GTAGCTTTGGAGCCCCAGTTTGCACAACCTCACCCAAAATGGGTATCCTGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| CDS-3UTR TCA 90 bp | AGGAAAACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTATTGTTTGTCATGATGACACTTaGACGGTTGGAGCCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKTEKHTIVFAFLGHRIVCHDDT*TVGAWD Trigger: ATCCCAGGCTCCAACCGTTCAAGTGTCATCATGACA...AACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGTTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR TCA 90 bp | CTGAAGCAAAATATTTGCAAGTTAAGCACCAAAGGACCAAGTAAAGGACCTTCTCTGGTCAGTGCAGACTaGGGCAAGGTTCTCCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKQNICKLSTKGPSKGPSLVSAD*GKVLRG Trigger: CCCACGGAGAACCTTGCCTCAGTCTGCACTGACCAG...AGAAGGTCCTTTACTTGGTCCTTTGGTGCTTAACTTGCAAATATTTTGCTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR TCA 90 bp | TTCCCAGCCTCTTCAGCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGATCCTTCTAGGGGCTTaGCAATCTGTAACTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPASSACLPSSSSAVQHQILLGA*QSVTSL Trigger: CAGAGAAGTTACAGATTGTCAAGCCCCTAGAAGGAT...CTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGCTGAAGAGGCTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR TCA 90 bp | ACAAACACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGCAGGTGCTTTAATATCAGGAGGGGCCCTTaGAGGTCTCAAGCCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: TNTLLYFCRYQETGRCFNIRRGP*RSQAIH Trigger: ATGTATGGCTTGAGACCTTCAAGGGCCCCTCCTGAT...ATTAAAGCACCTGCCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGTGTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR GCA 90 bp | TATAGAAAACTCATATGCTCTTACCACTGTGTGGAGGCTGGCTTTTCTAACCCTGTCTCAGGCGCATCCTaGTGCTGGTGTGATGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: YRKLICSYHCVEAGFSNPVSGAS*CWCDDC Trigger: ACAGTCATCACACCAGCAGCAGGATGCGCCTGAGAC...AGGGTTAGAAAAGCCAGCCTCCACACAGTGGTAAGAGCATATGAGTTTTCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR GCA 90 bp | CCGGAAGACTCTGATTCCTCCTCAGTCCACACAATAAACTGCCACCTGAATTTACTGACTTCTTCCTCCTaGTCAGCCAAGATCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PEDSDSSSVHTINCHLNLLTSSS*SAKIWI Trigger: GATCCAGATCTTGGCTGAGCAGGAGGAAGAAGTCAG...TAAATTCAGGTGGCAGTTTATTGTGTGGACTGAGGAGGAATCAGAGTCTTCCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTTATTTTGCTAATGCTGAGAGTGCACCATTGGATGGATGCATTTGACCAGAGCTGCTCGCACTACTaGCACAGGCCAGTGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLILLMLRVHHWMDAFDQSCSHY*HRPVMG Trigger: TCCCATCACTGGCCTGTGGCAGTAGTGCGAGCAGCT...CTGGTCAAATGCATCCATCCAATGGTGCACTCTCAGCATTAGCAAAATAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR CCA 90 bp | TATAGAAAACTCATATGCTCTTACCACTGTGTGGAGGCTGGCTTTTCTAACCCTGTCGCTGGGCATCTTTaGAAGCCTGCAGGTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YRKLICSYHCVEAGFSNPVAGHL*KPAGEV Trigger: GACTTCACCTGCAGGCTTCCAAAGATGCCCAGCGAC...AGGGTTAGAAAAGCCAGCCTCCACACAGTGGTAAGAGCATATGAGTTTTCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR CCA 90 bp | GGCTCTCCCATAAACAAACACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGTTTAGTGATGACGCCTaGGCGTGGATCAAGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSPINKHPSLLLQIPRDRFSDDA*AWIKNG Trigger: ACCATTCTTGATCCACGCCCAGGCGTCATCACTAAA...CCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGTGTTTGTTTATGGGAGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR GCA 90 bp | ACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTATTGTTCAGAAGCAGAAGGGCCGGACTTaGTACGAAGCTCTTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: TEKHTIVFAFLGHRIVQKQKGRT*YEALLF Trigger: AAATAAAAGAGCTTCGTAGCAAGTCCGGCCCTTCTG...CTTCTGAACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR GCA 90 bp | TATAGAAAACTCATATGCTCTTACCACTGTGTGGAGGCTGGCTTTTCTAACCCTTCTCCGACTGGTCAGTaGAGACTGAGGCAAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YRKLICSYHCVEAGFSNPSPTGQ*RLRQGS Trigger: AGAACCTTGCCTCAGTCTGCACTGACCAGTCGGAGA...AGGGTTAGAAAAGCCAGCCTCCACACAGTGGTAAGAGCATATGAGTTTTCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CCA 90 bp | GCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGAGGGGCCCTTGAAGTGCTCAGATAAGACATaGTTTCGCTTTAAAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ACLPSSSSAVQHQEGPLKCSDKT*FRFKRA Trigger: AGCTCTTTTAAAGCGAAACCATGTCTTATCTGAGCA...CTTCAAGGGCCCCTCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| CDS-3UTR TCA 90 bp | GGCTCTCCCATAAACAAACACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGTGCTTCACCTGTTCGTaGTTTGAAAATGGCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSPINKHPSLLLQIPRDRCFTCS*FENGIL Trigger: CAGAATGCCATTTTCAAATCACGAACAGGTGAAGCA...CCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGTGTTTGTTTATGGGAGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR GCA 90 bp | TATAGAAAACTCATATGCTCTTACCACTGTGTGGAGGCTGGCTTTTCTAACCCTAAGGCTTGTCCCAACTaGTCCTCCAGAGCTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: YRKLICSYHCVEAGFSNPKACPN*SSRASF Trigger: GAATGAAGCTCTGGAGGAGCAGTTGGGACAAGCCTT...AGGGTTAGAAAAGCCAGCCTCCACACAGTGGTAAGAGCATATGAGTTTTCTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR GCA 90 bp | GAGTCCTGTGGAGGAAGAACTTACTGGAAAGTTCCAGTTCTTGTTATATTTTGCTCCTGGGTTCGAAGTTaGAACTGTACCTGGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ESCGGRTYWKVPVLVIFCSWVRS*NCTWST Trigger: GGTGGACCAGGTACAGTTGCAACTTCGAACCCAGGA...GCAAAATATAACAAGAACTGGAACTTTCCAGTAAGTTCTTCCTCCACAGGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CCA 90 bp | CTGAAGCAAAATATTTGCAAGTTAAGCACCAAAGGACCAAGTAAAGGACCTTCTTTGTCCTCTGCTGGCTaGACACCAGACTCAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKQNICKLSTKGPSKGPSLSSAG*TPDSKG Trigger: GCCCTTTGAGTCTGGTGTCCAGCCAGCAGAGGACAA...AGAAGGTCCTTTACTTGGTCCTTTGGTGCTTAACTTGCAAATATTTTGCTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR GCA 90 bp | ATAAACTGCCACCTGAATTTAAATAAACAGCAGGGTCTGGTTTTTGAAGACCCATCTCCGACTGGTCAGTaGAGACTGAGGCAAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: INCHLNLNKQQGLVFEDPSPTGQ*RLRQGS Trigger: AGAACCTTGCCTCAGTCTGCACTGACCAGTCGGAGA...TGGGTCTTCAAAAACCAGACCCTGCTGTTTATTTAAATTCAGGTGGCAGTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| CDS-3UTR CCA 90 bp | ACAAACACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGCAGGTGCTTTAATTCAGCTTTTTACGCATaGTCCCTTCAATCTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TNTLLYFCRYQETGRCFNSAFYA*SLQSQL Trigger: CAGCTGAGATTGAAGGGACCATGCGTAAAAAGCTGA...ATTAAAGCACCTGCCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGTGTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR CCA 90 bp | TTTCTTATTTTGCTAATGCTGAGAGTGCACCATTGGATGGATGCATTTGACCAGAAAGATTCCCGTTACTaGCGTGGGCAGTGCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLILLMLRVHHWMDAFDQKDSRY*RGQCRF Trigger: AAACCTGCACTGCCCACGCCAGTAACGGGAATCTTT...CTGGTCAAATGCATCCATCCAATGGTGCACTCTCAGCATTAGCAAAATAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| 3UTR CAA 72 bp | TTAAGCACCAAAGGACCAAGTAAAGGACCTTCTGCCTaGACAAACAAAACCAACAGTTGCCCCTTATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSTKGPSKGPSA*TNKTNSCPLSP Trigger: AGGAGATAAGGGGCAACTGTTGGTTTTGTTTGTCAAGGCAGAAGGTCCTTTACTTGGTCCTTTGGTGCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR CAA 72 bp | AGTGGCCACTTAGGCACTGACAGAAGGACAGAATTATaGTCACCACAGAACTCCACAATCTCTAACTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGHLGTDRRTEL*SPQNSTISNSV Trigger: TACTGAGTTAGAGATTGTGGAGTTCTGTGGTGACAATAATTCTGTCCTTCTGTCAGTGCCTAAGTGGCCACT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR TCA 90 bp | ACAAACACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGCAGGTGCTTTAATCACCTGTTCGTGATTTaGAAATGGCATTCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: TNTLLYFCRYQETGRCFNHLFVI*KWHSGI Trigger: AATCCCAGAATGCCATTTTCAAATCACGAACAGGTG...ATTAAAGCACCTGCCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGTGTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR TCA 90 bp | TATAGAAAACTCATATGCTCTTACCACTGTGTGGAGGCTGGCTTTTCTAACCCTGTTTCTGTCTTGATATaGCAAGCCTTGGATCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: YRKLICSYHCVEAGFSNPVSVLI*QALDRR Trigger: CCTACGATCCAAGGCTTGTCATATCAAGACAGAAAC...AGGGTTAGAAAAGCCAGCCTCCACACAGTGGTAAGAGCATATGAGTTTTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR TCA 90 bp | TATAGAAAACTCATATGCTCTTACCACTGTGTGGAGGCTGGCTTTTCTAACCCTTGTCATTGGCAACCTTaGCAGTATCAAACACCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: YRKLICSYHCVEAGFSNPCHWQP*QYQTPV Trigger: AACGGGTGTTTGATACTGTCAAGGTTGCCAATGACA...AGGGTTAGAAAAGCCAGCCTCCACACAGTGGTAAGAGCATATGAGTTTTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR GCA 90 bp | CTGAAGCAAAATATTTGCAAGTTAAGCACCAAAGGACCAAGTAAAGGACCTTCTCTGACTTCTTCCTCCTaGTCAGCCAAGATCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LKQNICKLSTKGPSKGPSLTSSS*SAKIWI Trigger: GATCCAGATCTTGGCTGAGCAGGAGGAAGAAGTCAG...AGAAGGTCCTTTACTTGGTCCTTTGGTGCTTAACTTGCAAATATTTTGCTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR CAA 72 bp | ACCCTTTCTTCCATTTGTCTCCAAACTGGTCATCACTaGTCCCCACTTTGTTTACTAGACTCCATCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLSSICLQTGHH*SPLCLLDSILK Trigger: TTTGAGGATGGAGTCTAGTAAACAAAGTGGGGACAAGTGATGACCAGTTTGGAGACAAATGGAAGAAAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR TCA 90 bp | GAGTCCTGTGGAGGAAGAACTTACTGGAAAGTTCCAGTTCTTGTTATATTTTGCCTCTCCGAGTCTCTATaGTTGCTACTCATGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESCGGRTYWKVPVLVIFCLSESL*LLLMRF Trigger: AAACCTCATGAGTAGCAATCATAGAGACTCGGAGAG...GCAAAATATAACAAGAACTGGAACTTTCCAGTAAGTTCTTCCTCCACAGGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR TCA 90 bp | GGGAGGTGGTACTCAGTTATTTATAGACTAGAAACGCAAATGCTGTTTTTAAAACTTCTTCCAGCTCCCTaGGCTTCTCATGCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GRWYSVIYRLETQMLFLKLLPAP*ASHAAC Trigger: ACATGCTGCATGAGAAGCTCAGGGAGCTGGAAGAAG...TTTTAAAAACAGCATTTGCGTTTCTAGTCTATAAATAACTGAGTACCACCTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR TCA 90 bp | CTGAAGCAAAATATTTGCAAGTTAAGCACCAAAGGACCAAGTAAAGGACCTTCTGCTGAACCTGAAAAGTaGTGCCCTCTTCTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKQNICKLSTKGPSKGPSAEPEK*CPLLHP Trigger: AGGATGAAGAAGAGGGCATCACTTTTCAGGTTCAGC...AGAAGGTCCTTTACTTGGTCCTTTGGTGCTTAACTTGCAAATATTTTGCTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR TCA 90 bp | CTGAAGCAAAATATTTGCAAGTTAAGCACCAAAGGACCAAGTAAAGGACCTTCTGCAGGGTCTGGTTTTTaGAGACCCATTTCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKQNICKLSTKGPSKGPSAGSGF*RPISAS Trigger: AGAAGCAGAAATGGGTCTTCAAAAACCAGACCCTGC...AGAAGGTCCTTTACTTGGTCCTTTGGTGCTTAACTTGCAAATATTTTGCTTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CCA 90 bp | TTTCTTATTTTGCTAATGCTGAGAGTGCACCATTGGATGGATGCATTTGACCAGTCAGGATACCCATTTTaGGTGAGGTTGTGCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: FLILLMLRVHHWMDAFDQSGYPF*VRLCKL Trigger: CAGTTTGCACAACCTCACCCAAAATGGGTATCCTGA...CTGGTCAAATGCATCCATCCAATGGTGCACTCTCAGCATTAGCAAAATAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR TCA 90 bp | CTGAAGCAAAATATTTGCAAGTTAAGCACCAAAGGACCAAGTAAAGGACCTTCTATCCTTCTAGGGGCTTaGCAATCTGTAACTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKQNICKLSTKGPSKGPSILLGA*QSVTSL Trigger: CAGAGAAGTTACAGATTGTCAAGCCCCTAGAAGGAT...AGAAGGTCCTTTACTTGGTCCTTTGGTGCTTAACTTGCAAATATTTTGCTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR TCA 90 bp | GGGAGGTGGTACTCAGTTATTTATAGACTAGAAACGCAAATGCTGTTTTTAAAACAAAGCTACCCATCATaGCCGGAAGACTCTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRWYSVIYRLETQMLFLKQSYPS*PEDSDS Trigger: GGAATCAGAGTCTTCCGGTCATGATGGGTAGCTTTG...TTTTAAAAACAGCATTTGCGTTTCTAGTCTATAAATAACTGAGTACCACCTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR GCA 90 bp | TTTCTTATTTTGCTAATGCTGAGAGTGCACCATTGGATGGATGCATTTGACCAGTTGAAGACCCATTTCTaGTTCTCGGCTTTTTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLILLMLRVHHWMDAFDQLKTHF*FSAFSV Trigger: AACGGAAAAAGCCGAGAAGCAGAAATGGGTCTTCAA...CTGGTCAAATGCATCCATCCAATGGTGCACTCTCAGCATTAGCAAAATAAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR TCA 90 bp | GGGAGGTGGTACTCAGTTATTTATAGACTAGAAACGCAAATGCTGTTTTTAAAATTGGAAGCCTGCAGGTaGAGTCTTAGTTCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRWYSVIYRLETQMLFLKLEACR*SLSSSF Trigger: GAAGGAAGAACTAAGACTTCACCTGCAGGCTTCCAA...TTTTAAAAACAGCATTTGCGTTTCTAGTCTATAAATAACTGAGTACCACCTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CCA 90 bp | TTTCTTATTTTGCTAATGCTGAGAGTGCACCATTGGATGGATGCATTTGACCAGATAAACAGCAGGGTCTaGTTTTTGAAGACCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLILLMLRVHHWMDAFDQINSRV*FLKTHF Trigger: GAAATGGGTCTTCAAAAACCAGACCCTGCTGTTTAT...CTGGTCAAATGCATCCATCCAATGGTGCACTCTCAGCATTAGCAAAATAAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| 3UTR CAA 72 bp | AGCAAAGGAAGGTGCATAAAGAGTGACTTGACAAAGTaGTGTTCCAGATATGACACAATAGCATTTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKGRCIKSDLTK*CSRYDTIAFSW Trigger: CCAGGAAAATGCTATTGTGTCATATCTGGAACACAACTTTGTCAAGTCACTCTTTATGCACCTTCCTTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR GCA 90 bp | CTGAAGCAAAATATTTGCAAGTTAAGCACCAAAGGACCAAGTAAAGGACCTTCTAAGCCATACATTTCTTaGAGGAATGTTTCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKQNICKLSTKGPSKGPSKPYIS*RNVSAG Trigger: ACCAGCTGAAACATTCCTGCAAGAAATGTATGGCTT...AGAAGGTCCTTTACTTGGTCCTTTGGTGCTTAACTTGCAAATATTTTGCTTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CCA 90 bp | GGGAGGTGGTACTCAGTTATTTATAGACTAGAAACGCAAATGCTGTTTTTAAAATGCTCAGATAAGACATaGTTTCGCTTTAAAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRWYSVIYRLETQMLFLKCSDKT*FRFKRA Trigger: AGCTCTTTTAAAGCGAAACCATGTCTTATCTGAGCA...TTTTAAAAACAGCATTTGCGTTTCTAGTCTATAAATAACTGAGTACCACCTCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS TCA 90 bp | GCTGGCACTGCCGAGGTCCGTGGTCTCCGACTGGTCAGTGCAGACTaGGGCAAGGTTCTCCGTGGGGGCGTCACAGCTGCTGACTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGTAEVRGLRLVSAD*GKVLRGGVTAADFF Trigger: GAAGAAGTCAGCAGCTGTGACGCCCCCACGGAGAACCTTGCCTCAGTCTGCACTGACCAGTCGGAGACCACGGACCTCGGCAGTGCCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
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| CDS-3UTR CAA 90 bp | GCACCACAGGCTGAAGGCCTAAACCCCAGCCTCAGGCCTCACTTGCTTTTCAGCTGGGGATCAGGGGTCTaGACCACCCTGGCTATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: APQAEGLNPSLRPHLLFSWGSGV*TTLAIP Trigger: GGGAATAGCCAGGGTGGTCAAGACCCCTGATCCCCA...GCTGAAAAGCAAGTGAGGCCTGAGGCTGGGGTTTAGGCCTTCAGCCTGTGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CAA 90 bp | GGGCAAGGCTGCAGGAGGGGGTTTTCTGAAGCCGGGCTGTGGTACACTTTAGCAAGCAGCTCGTCTTTCTaGGAGAGCTCGTGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GQGCRRGFSEAGLWYTLASSSSF*ESSCCS Trigger: GCTGCAGCACGAGCTCTCCAAGAAAGACGAGCTGCT...TGCTAAAGTGTACCACAGCCCGGCTTCAGAAAACCCCCTCCTGCAGCCTTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| CDS-3UTR CAA 90 bp | GCACCACAGGCTGAAGGCCTAAACCCCAGCCTCAGGCCTCACTTGCTTTTCAGCGGGCTCAGGAGTGTTTaGTCCTCTGCTGGCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: APQAEGLNPSLRPHLLFSGLRSV*SSAGWT Trigger: TGTCCAGCCAGCAGAGGACAAAACACTCCTGAGCCC...GCTGAAAAGCAAGTGAGGCCTGAGGCTGGGGTTTAGGCCTTCAGCCTGTGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS CCA 90 bp | GAGGCGATGCAATGCAGTAGCCAGATCACTATCTTCAGGGGATCCTaGGGGGTTTGTGGGCTGCGAGTTTCCTGGAACCTCTGTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EAMQCSSQITIFRGS*GVCGLRVSWNLCAA Trigger: GGCAGCACAGAGGTTCCAGGAAACTCGCAGCCCACAAACCCCCCAGGATCCCCTGAAGATAGTGATCTGGCTACTGCATTGCATCGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
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| CDS-3UTR CAA 90 bp | GCACCACAGGCTGAAGGCCTAAACCCCAGCCTCAGGCCTCACTTGCTTTTCAGCATGACACTTGAACGGTaGGAGCCTGGGATGGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: APQAEGLNPSLRPHLLFSMTLER*EPGMGS Trigger: GCTACCCATCCCAGGCTCCAACCGTTCAAGTGTCAT...GCTGAAAAGCAAGTGAGGCCTGAGGCTGGGGTTTAGGCCTTCAGCCTGTGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CAA 90 bp | GCACCACAGGCTGAAGGCCTAAACCCCAGCCTCAGGCCTCACTTGCTTTTCAGCGAGTTCACAGCCGTGTaGGATGAGCTGCTCGCACTA | + |
|
Preference number: 5 (lower is better) Translates to: APQAEGLNPSLRPHLLFSEFTAV*DELLAL Trigger: TAGTGCGAGCAGCTCATCCAACACGGCTGTGAACTC...GCTGAAAAGCAAGTGAGGCCTGAGGCTGGGGTTTAGGCCTTCAGCCTGTGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS GCA 90 bp | GCAAGGTTCTCCGTGGGGGCGTCACAGCTGCTGACTTCTTCCTCCTaGTCAGCCAAGATCTGGATCTTCCGTTCCCATTCCTCAGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ARFSVGASQLLTSSS*SAKIWIFRSHSSAK Trigger: CTTTGCTGAGGAATGGGAACGGAAGATCCAGATCTTGGCTGAGCAGGAGGAAGAAGTCAGCAGCTGTGACGCCCCCACGGAGAACCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS CCA 90 bp | ATCCTTGGGCACCTGTGTGAAGCCTTTAGTGATGACGCCTGGGCGTaGATCAAGAATGGTTCCCAAGTTCGGCTGAGCAAGCTGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ILGHLCEAFSDDAWA*IKNGSQVRLSKLLP Trigger: TGGCAGCAGCTTGCTCAGCCGAACTTGGGAACCATTCTTGATCCACGCCCAGGCGTCATCACTAAAGGCTTCACACAGGTGCCCAAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGTCGGGAAGCCAAGAAATTCTCGGAGACATGCACTCGGGGTTCAAAGGGCACTCATGAAGCTCCATaGTCAGCTGTCGCTGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: AGREAKKFSETCTRGSKGTHEAP*SAVAGH Trigger: ATGCCCAGCGACAGCTGACAATGGAGCTTCATGAGT...GCCCTTTGAACCCCGAGTGCATGTCTCCGAGAATTTCTTGGCTTCCCGACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTGGTGCTACTGAAGGTTATGGTGGAGTCCCTGCGGTTTGTGATGGATTCGGGGCTCAGGAGTGTTTaGTCCTCTGCTGGCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LLVLLKVMVESLRFVMDSGLRSV*SSAGWT Trigger: TGTCCAGCCAGCAGAGGACAAAACACTCCTGAGCCC...CGAATCCATCACAAACCGCAGGGACTCCACCATAACCTTCAGTAGCACCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS CCA 90 bp | TCTGTGCTGCCCCCTGGGCTCAGGAGTGTTTTGTCCTCTGCTGGCTaGACACCAGACTCAAAGGGCTTTGCTGTCATGATGACACTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SVLPPGLRSVLSSAG*TPDSKGFAVMMTLE Trigger: TTCAAGTGTCATCATGACAGCAAAGCCCTTTGAGTCTGGTGTCCAGCCAGCAGAGGACAAAACACTCCTGAGCCCAGGGGGCAGCACAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS CCA 90 bp | CAATGCTTAGTCTATAGGATGCAGCAGGGGAGTTCACAGCCGTGTTaGATGAGCTGCTCGCACTACTGCCACAGGCCAGTGATGGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QCLVYRMQQGSSQPC*MSCSHYCHRPVMGN Trigger: GTTTCCCATCACTGGCCTGTGGCAGTAGTGCGAGCAGCTCATCCAACACGGCTGTGAACTCCCCTGCTGCATCCTATAGACTAAGCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR CAA 90 bp | CTCCTGGTGCTACTGAAGGTTATGGTGGAGTCCCTGCGGTTTGTGATGGATTCGAAGCTGAAGGACTCATaGAACCGAAGGGGCGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLVLLKVMVESLRFVMDSKLKDS*NRRGVE Trigger: CTCCACGCCCCTTCGGTTCAATGAGTCCTTCAGCTT...CGAATCCATCACAAACCGCAGGGACTCCACCATAACCTTCAGTAGCACCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGCCTCTTCAGCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGAATGACACTTGAACGGTaGGAGCCTGGGATGGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSLFSLSTKFIFSCPTSGMTLER*EPGMGS Trigger: GCTACCCATCCCAGGCTCCAACCGTTCAAGTGTCAT...TCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGCTGAAGAGGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGCCTCTTCAGCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGATCAGGGAGATCCTCGTaGGAGCAGACATCAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PSLFSLSTKFIFSCPTSGSGRSS*EQTSVM Trigger: CATCACTGATGTCTGCTCCAACGAGGATCTCCCTGA...TCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGCTGAAGAGGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CAA 90 bp | ACAAACACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGCAGGTGCTTTAATACTGCGCTGGGGAATTaGGTGGTGTGGAGGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TNTLLYFCRYQETGRCFNTALGN*VVWRGW Trigger: CCACCCCCTCCACACCACCAAATTCCCCAGCGCAGT...ATTAAAGCACCTGCCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGTGTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS TCA 90 bp | GGGCAGCTAGCTCTAGATCTCGATCCCTCTCTGCCAGGAGATGTGTaGCCATGTCAATGTCATTGTAGGTTTTGGTCATCTGCTCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: GQLALDLDPSLPGDV*PCQCHCRFWSSAPL Trigger: GAGTGGAGCAGATGACCAAAACCTACAATGACATTGACATGGTCACACATCTCCTGGCAGAGAGGGATCGAGATCTAGAGCTAGCTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAAACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTATTGTTAGCAGCTCGTCTTTCTaGGAGAGCTCGTGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RKTEKHTIVFAFLGHRIVSSSSF*ESSCCS Trigger: GCTGCAGCACGAGCTCTCCAAGAAAGACGAGCTGCT...AACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGTTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR CAA 90 bp | GTTTCCTTCCTAGGCAGGCGCTTCCGGCTTGTGTTCTCTAGGGACAAAGGTGCTGTCATTGACGAGCTGTaGTTCCTTCTCTTCATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSFLGRRFRLVFSRDKGAVIDEL*FLLFIG Trigger: ACCTATGAAGAGAAGGAACAACAGCTCGTCAATGAC...AGCACCTTTGTCCCTAGAGAACACAAGCCGGAAGCGCCTGCCTAGGAAGGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR CAA 90 bp | CATCCAAGGAAAACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTACTCATGAAGCTCCATaGTCAGCTGTCGCTGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HPRKTEKHTIVFAFLGHRTHEAP*SAVAGH Trigger: ATGCCCAGCGACAGCTGACAATGGAGCTTCATGAGT...ACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGTTTTCCTTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR CAA 90 bp | GCTAAGCTCCTGGTGCTACTGAAGGTTATGGTGGAGTCCCTGCGGTTTGTGATGGTGTCATTGGCAACCTaGACAGTATCAAACACCCGT | + |
|
Preference number: 5 (lower is better) Translates to: AKLLVLLKVMVESLRFVMVSLAT*TVSNTR Trigger: ACGGGTGTTTGATACTGTCAAGGTTGCCAATGACAC...CATCACAAACCGCAGGGACTCCACCATAACCTTCAGTAGCACCAGGAGCTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAAACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTATTGTTAAGCTGAAGGACTCATaGAACCGAAGGGGCGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RKTEKHTIVFAFLGHRIVKLKDS*NRRGVE Trigger: CTCCACGCCCCTTCGGTTCAATGAGTCCTTCAGCTT...AACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGTTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR CAA 90 bp | GCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGAGGGGCCCTTGAAGGTCATTGACGAGCTGTaGTTCCTTCTCTTCATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ACLPSSSSAVQHQEGPLKVIDEL*FLLFIG Trigger: ACCTATGAAGAGAAGGAACAACAGCTCGTCAATGAC...CTTCAAGGGCCCCTCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGGAGTTTGGCTAAGCTCCTGGTGCTACTGAAGGTTATGGTGGAGTCCCTGGATCCTTCTAGGGGCTaGACAATCTGTAACTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CRSLAKLLVLLKVMVESLDPSRG*TICNFS Trigger: AGAGAAGTTACAGATTGTCAAGCCCCTAGAAGGATC...CAGGGACTCCACCATAACCTTCAGTAGCACCAGGAGCTTAGCCAAACTCCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAAACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTATTGTTCATCAGGAGGGGCCCTaGAAGGTCTCAAGCCATACA | + |
|
Preference number: 5 (lower is better) Translates to: RKTEKHTIVFAFLGHRIVHQEGP*KVSSHT Trigger: TGTATGGCTTGAGACCTTCAAGGGCCCCTCCTGATG...AACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGTTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS GCA 90 bp | GCTTCATTCTGCTCAGATAAGACATGGTTTCGCTTTAAAAGAGCTTaGCCAATTCGGGCAGCTAGCTCTAGATCTCGATCCCTCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASFCSDKTWFRFKRA*PIRAASSRSRSLSA Trigger: GGCAGAGAGGGATCGAGATCTAGAGCTAGCTGCCCGAATTGGGCAAGCTCTTTTAAAGCGAAACCATGTCTTATCTGAGCAGAATGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS GCA 90 bp | CGCCGTAAGACTGGGAGAAGCAGAGATGAGCAGAAGGGCCGGACTTaGTACGAAGCTCTTTTATTTCTTCTTGGGACTCATGTAACATTC | + |
|
Preference number: 5 (lower is better) Translates to: RRKTGRSRDEQKGRT*YEALLFLLGTHVTF Trigger: GAATGTTACATGAGTCCCAAGAAGAAATAAAAGAGCTTCGTAGCAAGTCCGGCCCTTCTGCTCATCTCTGCTTCTCCCAGTCTTACGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS CCA 90 bp | TGTCCCAACTGCTCCTCCAGAGCTTCATTCTGCTCAGATAAGACATaGTTTCGCTTTAAAAGAGCTTGCCCAATTCGGGCAGCTAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CPNCSSRASFCSDKT*FRFKRACPIRAASS Trigger: AGAGCTAGCTGCCCGAATTGGGCAAGCTCTTTTAAAGCGAAACCATGTCTTATCTGAGCAGAATGAAGCTCTGGAGGAGCAGTTGGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGCCTCTTCAGCCTGTCTACCAAGTTCATCTTCAGCTGTCCAACATCAGGATCTTTAACACAGTCATaGACGAGCTGTTGTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSLFSLSTKFIFSCPTSGSLTQS*TSCCSF Trigger: GAAGGAACAACAGCTCGTCAATGACTGTGTTAAAGA...TCCTGATGTTGGACAGCTGAAGATGAACTTGGTAGACAGGCTGAAGAGGCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS-3UTR CAA 90 bp | ACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTATTGTTCAGAAGGTGTCATTGGCAACCTaGACAGTATCAAACACCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TEKHTIVFAFLGHRIVQKVSLAT*TVSNTR Trigger: ACGGGTGTTTGATACTGTCAAGGTTGCCAATGACAC...CTTCTGAACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR CAA 90 bp | ACGGAGAAACACACAATCGTGTTTGCATTCCTGGGCCACCGTATTGTTCAGAAGGATCCTTCTAGGGGCTaGACAATCTGTAACTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TEKHTIVFAFLGHRIVQKDPSRG*TICNFS Trigger: AGAGAAGTTACAGATTGTCAAGCCCCTAGAAGGATC...CTTCTGAACAATACGGTGGCCCAGGAATGCAAACACGATTGTGTGTTTCTCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS TCA 90 bp | AGATCCTCGTTGGAGCAGACATCAGTGATGCTCTCCGAGTCTCTATaGTTGCTACTCATGAGGTTTGCTTCACCTGTTCGTGATTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RSSLEQTSVMLSESL*LLLMRFASPVRDLK Trigger: TTTCAAATCACGAACAGGTGAAGCAAACCTCATGAGTAGCAATCATAGAGACTCGGAGAGCATCACTGATGTCTGCTCCAACGAGGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS TCA 90 bp | TCCACTCTGTCTGTGCCTAGAACAGTGATGCTCTCCGAGTCTCTATaGTTGCTACTCATGAGGTTTGCTTCACCTGTTCGTGATTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: STLSVPRTVMLSESL*LLLMRFASPVRDLK Trigger: TTTCAAATCACGAACAGGTGAAGCAAACCTCATGAGTAGCAATCATAGAGACTCGGAGAGCATCACTGTTCTAGGCACAGACAGAGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173590.2 |
||
| CDS-3UTR CAA 90 bp | GAGTCCTGTGGAGGAAGAACTTACTGGAAAGTTCCAGTTCTTGTTATATTTTGCTCAGGGAGATCCTCGTaGGAGCAGACATCAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ESCGGRTYWKVPVLVIFCSGRSS*EQTSVM Trigger: CATCACTGATGTCTGCTCCAACGAGGATCTCCCTGA...GCAAAATATAACAAGAACTGGAACTTTCCAGTAAGTTCTTCCTCCACAGGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR CAA 90 bp | GTGGAGGAAGAACTTACTGGAAAGTTCCAGTTCTTGTTATATTTTGCAGATAGTCGCTCCTGCAGGAGTTaGGCTAAGCTCCTGGTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VEEELTGKFQFLLYFADSRSCRS*AKLLVL Trigger: TAGCACCAGGAGCTTAGCCAAACTCCTGCAGGAGCG...ACTATCTGCAAAATATAACAAGAACTGGAACTTTCCAGTAAGTTCTTCCTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR CAA 90 bp | AAACAGCAGGGTCTGGTTTTTGAAGACCCATTTCTGCTTCTCGGCTTTTTCCGTTCACCTGTTCGTGATTaGAAAATGGCATTCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KQQGLVFEDPFLLLGFFRSPVRD*KMAFWD Trigger: ATCCCAGAATGCCATTTTCAAATCACGAACAGGTGA...ACGGAAAAAGCCGAGAAGCAGAAATGGGTCTTCAAAAACCAGACCCTGCTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
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| CDS-3UTR CAA 90 bp | ACAAACACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGCAGGTGCTTTAATCTGCAGCTGATTAACTaGATCAAAGGCTTGTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TNTLLYFCRYQETGRCFNLQLIN*IKGLSQ Trigger: TTGGGACAAGCCTTTGATCAAGTTAATCAGCTGCAG...ATTAAAGCACCTGCCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGTGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR CAA 90 bp | ACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGCAGGTGCTTTAATGTACACTCTTTAACACAGTCATaGACGAGCTGTTGTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLLYFCRYQETGRCFNVHSLTQS*TSCCSF Trigger: GAAGGAACAACAGCTCGTCAATGACTGTGTTAAAGA...GTGTACATTAAAGCACCTGCCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CAA 90 bp | ACAAACACCCTTCTCTACTTCTGCAGATACCAAGAGACAGGCAGGTGCTTTAATCAAGCCATACATTTCTaGCAGGAATGTTTCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TNTLLYFCRYQETGRCFNQAIHF*QECFSW Trigger: CCAGCTGAAACATTCCTGCAAGAAATGTATGGCTTG...ATTAAAGCACCTGCCTGTCTCTTGGTATCTGCAGAAGTAGAGAAGGGTGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS-3UTR CAA 90 bp | CTGAAGCAAAATATTTGCAAGTTAAGCACCAAAGGACCAAGTAAAGGACCTTCTCCATTTTGGGTGAGGTaGTGCAAACTGGGGCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LKQNICKLSTKGPSKGPSPFWVR*CKLGLQ Trigger: TTGGAGCCCCAGTTTGCACAACCTCACCCAAAATGG...AGAAGGTCCTTTACTTGGTCCTTTGGTGCTTAACTTGCAAATATTTTGCTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS-3UTR CAA 90 bp | TATAGAAAACTCATATGCTCTTACCACTGTGTGGAGGCTGGCTTTTCTAACCCTTCACCTGTTCGTGATTaGAAAATGGCATTCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: YRKLICSYHCVEAGFSNPSPVRD*KMAFWD Trigger: ATCCCAGAATGCCATTTTCAAATCACGAACAGGTGA...AGGGTTAGAAAAGCCAGCCTCCACACAGTGGTAAGAGCATATGAGTTTTCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
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| CDS TCA 72 bp | GCCGAGGTCCGTGGTCTCCGACTGGTCAGTGCAGACTaGGGCAAGGTTCTCCGTGGGGGCGTCACAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AEVRGLRLVSAD*GKVLRGGVTAA Trigger: AGCAGCTGTGACGCCCCCACGGAGAACCTTGCCTCAGTCTGCACTGACCAGTCGGAGACCACGGACCTCGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
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| CDS GCA 72 bp | TGGCACTGCCGAGGTCCGTGGTCTCCGACTGGTCAGTaGAGACTGAGGCAAGGTTCTCCGTGGGGGCGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: WHCRGPWSPTGQ*RLRQGSPWGRH Trigger: GTGACGCCCCCACGGAGAACCTTGCCTCAGTCTGCACTGACCAGTCGGAGACCACGGACCTCGGCAGTGCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS CAA 72 bp | GGAACCTCTGTGCTGCCCCCTGGGCTCAGGAGTGTTTaGTCCTCTGCTGGCTGGACACCAGACTCAAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTSVLPPGLRSV*SSAGWTPDSKG Trigger: GCCCTTTGAGTCTGGTGTCCAGCCAGCAGAGGACAAAACACTCCTGAGCCCAGGGGGCAGCACAGAGGTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
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| CDS TCA 72 bp | GTGATGGGAAACCGGAGCTGTACCTGGTCCACCCGCTaGGGTCATGGGCGGCAGAAAGATTCCCGTTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: VMGNRSCTWSTR*GHGRQKDSRYW Trigger: CCAGTAACGGGAATCTTTCTGCCGCCCATGACCTCAGCGGGTGGACCAGGTACAGCTCCGGTTTCCCATCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174120.2 |
||
| CDS GCA 72 bp | GGTTTGTGGGCTGCGAGTTTCCTGGAACCTCTGTGCTaGCCCCTGGGCTCAGGAGTGTTTTGTCCTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GLWAASFLEPLC*PLGSGVFCPLL Trigger: CAGCAGAGGACAAAACACTCCTGAGCCCAGGGGGCAGCACAGAGGTTCCAGGAAACTCGCAGCCCACAAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
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| CDS CAA 90 bp | GAGTTTCCTGGAACCTCTGTGCTGCCCCCTGGGCTCAGGAGTGTTTaGTCCTCTGCTGGCTGGACACCAGACTCAAAGGGCTTTGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: EFPGTSVLPPGLRSV*SSAGWTPDSKGFAV Trigger: GACAGCAAAGCCCTTTGAGTCTGGTGTCCAGCCAGCAGAGGACAAAACACTCCTGAGCCCAGGGGGCAGCACAGAGGTTCCAGGAAACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS GCA 72 bp | GCAAGGACTGGGGAGAGGGTCTCAGGCGCATCCTGCTaGTGGTGTGATGACTGTGCCCAGTCTTGGTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: ARTGERVSGASC*WCDDCAQSWFS Trigger: TGAAAACCAAGACTGGGCACAGTCATCACACCAGCAGCAGGATGCGCCTGAGACCCTCTCCCCAGTCCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS GCA 72 bp | TGTGCTGCCCCCTGGGCTCAGGAGTGTTTTGTCCTCTaGTGGCTGGACACCAGACTCAAAGGGCTTTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CAAPWAQECFVL*WLDTRLKGLCC Trigger: ACAGCAAAGCCCTTTGAGTCTGGTGTCCAGCCAGCAGAGGACAAAACACTCCTGAGCCCAGGGGGCAGCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS GCA 72 bp | TCCGTGGGGGCGTCACAGCTGCTGACTTCTTCCTCCTaGTCAGCCAAGATCTGGATCTTCCGTTCCCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVGASQLLTSSS*SAKIWIFRSHS Trigger: GGAATGGGAACGGAAGATCCAGATCTTGGCTGAGCAGGAGGAAGAAGTCAGCAGCTGTGACGCCCCCACGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS GCA 72 bp | ATGCAGCAGGGGAGTTCACAGCCGTGTTGGATGAGCTaGTCGCACTACTGCCACAGGCCAGTGATGGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: MQQGSSQPCWMS*SHYCHRPVMGN Trigger: GTTTCCCATCACTGGCCTGTGGCAGTAGTGCGAGCAGCTCATCCAACACGGCTGTGAACTCCCCTGCTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS CCA 72 bp | GTCTATAGGATGCAGCAGGGGAGTTCACAGCCGTGTTaGATGAGCTGCTCGCACTACTGCCACAGGCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VYRMQQGSSQPC*MSCSHYCHRPV Trigger: CACTGGCCTGTGGCAGTAGTGCGAGCAGCTCATCCAACACGGCTGTGAACTCCCCTGCTGCATCCTATAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS CAA 72 bp | GTCTACGATCTGAGACAGCAGGGAGGAGATCTCCTCTaGGTACCGGAGCAGCTCGTCGCTCTTTCCCGACAG | + |
|
Preference number: 6 (lower is better) Translates to: VYDLRQQGGDLL*VPEQLVALSRQ Trigger: CTGTCGGGAAAGAGCGACGAGCTGCTCCGGTACCAAGAGGAGATCTCCTCCCTGCTGTCTCAGATCGTAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS CAA 90 bp | GTGCTGAAGGTCTACGATCTGAGACAGCAGGGAGGAGATCTCCTCTaGGTACCGGAGCAGCTCGTCGCTCTTTCCCGACAGCTCTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VLKVYDLRQQGGDLL*VPEQLVALSRQLFS Trigger: ACTGAAGAGCTGTCGGGAAAGAGCGACGAGCTGCTCCGGTACCAAGAGGAGATCTCCTCCCTGCTGTCTCAGATCGTAGACCTTCAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS TCA 72 bp | TGGGTTCGAAGTTGCAACTGTACCTGGTCCACCCGCTaGGGTCATGGGCGGCAGAAAGATTCCCGTTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: WVRSCNCTWSTR*GHGRQKDSRYW Trigger: CCAGTAACGGGAATCTTTCTGCCGCCCATGACCTCAGCGGGTGGACCAGGTACAGTTGCAACTTCGAACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS TCA 72 bp | CAGGCCAGTGATGGGAAACCGGAGCTAGGGGTGACCTaGGTGATGTCAGAGGGATGTAAGATCCTGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QASDGKPELGVT*VMSEGCKILQV Trigger: CACCTGCAGGATCTTACATCCCTCTGACATCACTCAGGTCACCCCTAGCTCCGGTTTCCCATCACTGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027186.12 |
||
| CDS CAA 90 bp | ATGGGTAGCAGGACTGGGAAGGTGACAGAGCGGCCCCGAGTGTCATaGGCAACCTTGACAGTATCAAACACCCGTTTCTGCTGGGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: MGSRTGKVTERPRVS*ATLTVSNTRFCWAF Trigger: AAAGGCCCAGCAGAAACGGGTGTTTGATACTGTCAAGGTTGCCAATGACACTCGGGGCCGCTCTGTCACCTTCCCAGTCCTGCTACCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS CAA 90 bp | ACACCAGACTCAAAGGGCTTTGCTGTCATGATGACACTTGAACGGTaGGAGCCTGGGATGGGTAGCAGGACTGGGAAGGTGACAGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: TPDSKGFAVMMTLER*EPGMGSRTGKVTER Trigger: CCGCTCTGTCACCTTCCCAGTCCTGCTACCCATCCCAGGCTCCAACCGTTCAAGTGTCATCATGACAGCAAAGCCCTTTGAGTCTGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS CCA 72 bp | CAATGCAGTAGCCAGATCACTATCTTCAGGGGATCCTaGGGGGTTTGTGGGCTGCGAGTTTCCTGGAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: QCSSQITIFRGS*GVCGLRVSWNL Trigger: GAGGTTCCAGGAAACTCGCAGCCCACAAACCCCCCAGGATCCCCTGAAGATAGTGATCTGGCTACTGCATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS CCA 72 bp | CTTGGGCACCTGTGTGAAGCCTTTAGTGATGACGCCTaGGCGTGGATCAAGAATGGTTCCCAAGTTCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGHLCEAFSDDA*AWIKNGSQVRL Trigger: CAGCCGAACTTGGGAACCATTCTTGATCCACGCCCAGGCGTCATCACTAAAGGCTTCACACAGGTGCCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS CAA 72 bp | AGGACTGGGAAGGTGACAGAGCGGCCCCGAGTGTCATaGGCAACCTTGACAGTATCAAACACCCGTTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RTGKVTERPRVS*ATLTVSNTRFC Trigger: GCAGAAACGGGTGTTTGATACTGTCAAGGTTGCCAATGACACTCGGGGCCGCTCTGTCACCTTCCCAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
||
| CDS CCA 72 bp | CACCTGTGTGAAGCCTTTAGTGATGACGCCTGGGCGTaGATCAAGAATGGTTCCCAAGTTCGGCTGAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: HLCEAFSDDAWA*IKNGSQVRLSK Trigger: CTTGCTCAGCCGAACTTGGGAACCATTCTTGATCCACGCCCAGGCGTCATCACTAAAGGCTTCACACAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
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| CDS CAA 90 bp | AGGACTGGGAAGGTGACAGAGCGGCCCCGAGTGTCATTGGCAACCTaGACAGTATCAAACACCCGTTTCTGCTGGGCCTTTTGTTTAGAC | + |
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Preference number: 6 (lower is better) Translates to: RTGKVTERPRVSLAT*TVSNTRFCWAFCLD Trigger: GTCTAAACAAAAGGCCCAGCAGAAACGGGTGTTTGATACTGTCAAGGTTGCCAATGACACTCGGGGCCGCTCTGTCACCTTCCCAGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
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| CDS CAA 72 bp | AGCAAGTTCACCAGCTCGACTTCAGGGAGATCCTCGTaGGAGCAGACATCAGTGATGCTCTCCGAGTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: SKFTSSTSGRSS*EQTSVMLSESL Trigger: TAGAGACTCGGAGAGCATCACTGATGTCTGCTCCAACGAGGATCTCCCTGAAGTCGAGCTGGTGAACTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
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| CDS TCA 72 bp | ATTCCCAGGCATTCCATGTTCCTGTCCTGTAACTCATaGAGCTCCATTGTCAGCTGTCGCTGGGCATCTTTG | + |
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Preference number: 6 (lower is better) Translates to: IPRHSMFLSCNS*SSIVSCRWASL Trigger: CAAAGATGCCCAGCGACAGCTGACAATGGAGCTTCATGAGTTACAGGACAGGAACATGGAATGCCTGGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
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| CDS GCA 72 bp | ACTGGGAGAAGCAGAGATGAGCAGAAGGGCCGGACTTaGTACGAAGCTCTTTTATTTCTTCTTGGGACTCAT | + |
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Preference number: 6 (lower is better) Translates to: TGRSRDEQKGRT*YEALLFLLGTH Trigger: ATGAGTCCCAAGAAGAAATAAAAGAGCTTCGTAGCAAGTCCGGCCCTTCTGCTCATCTCTGCTTCTCCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
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| CDS CCA 72 bp | ACACAGATTCCTCATCCAAACTCAGCTTTTTACGCATaGTCCCTTCAATCTCAGCTGCCAACGATTCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: TQIPHPNSAFYA*SLQSQLPTIPL Trigger: CAGGGGAATCGTTGGCAGCTGAGATTGAAGGGACCATGCGTAAAAAGCTGAGTTTGGATGAGGAATCTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
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| CDS TCA 72 bp | TTGGAGCAGACATCAGTGATGCTCTCCGAGTCTCTATaGTTGCTACTCATGAGGTTTGCTTCACCTGTTCGT | + |
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Preference number: 6 (lower is better) Translates to: LEQTSVMLSESL*LLLMRFASPVR Trigger: ACGAACAGGTGAAGCAAACCTCATGAGTAGCAATCATAGAGACTCGGAGAGCATCACTGATGTCTGCTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
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| CDS TCA 72 bp | TCTGTGCCTAGAACAGTGATGCTCTCCGAGTCTCTATaGTTGCTACTCATGAGGTTTGCTTCACCTGTTCGT | + |
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Preference number: 6 (lower is better) Translates to: SVPRTVMLSESL*LLLMRFASPVR Trigger: ACGAACAGGTGAAGCAAACCTCATGAGTAGCAATCATAGAGACTCGGAGAGCATCACTGTTCTAGGCACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173590.2 |
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| CDS CCA 72 bp | TGCTCCTCCAGAGCTTCATTCTGCTCAGATAAGACATaGTTTCGCTTTAAAAGAGCTTGCCCAATTCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: CSSRASFCSDKT*FRFKRACPIRA Trigger: TGCCCGAATTGGGCAAGCTCTTTTAAAGCGAAACCATGTCTTATCTGAGCAGAATGAAGCTCTGGAGGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
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| CDS CAA 72 bp | CTTGACAGTATCAAACACCCGTTTCTGCTGGGCCTTTaGTTTAGACACAGATTCCTCATCCAAACTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: LDSIKHPFLLGL*FRHRFLIQTQL Trigger: AAGCTGAGTTTGGATGAGGAATCTGTGTCTAAACAAAAGGCCCAGCAGAAACGGGTGTTTGATACTGTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
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| CDS CAA 90 bp | ATTGGCAACCTTGACAGTATCAAACACCCGTTTCTGCTGGGCCTTTaGTTTAGACACAGATTCCTCATCCAAACTCAGCTTTTTACGCAT | + |
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Preference number: 6 (lower is better) Translates to: IGNLDSIKHPFLLGL*FRHRFLIQTQLFTH Trigger: ATGCGTAAAAAGCTGAGTTTGGATGAGGAATCTGTGTCTAAACAAAAGGCCCAGCAGAAACGGGTGTTTGATACTGTCAAGGTTGCCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027186.12 ENSMUST00000174120.2 |
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