Pregenerated sensors for TRAIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032586Ensembl transcript IDs: ENSMUST00000049348.9, ENSMUST00000194271.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATCTCCATCCAGACAGCCTCAGGCTCCTCCCATTTCCTGGCAAGTaGTTGGATTGTCTTCAGCACGAGGCACGCGGTGTGAGAGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: HLHPDSLRLLPFPGK*LDCLQHEARGVRGK Trigger: CTTCCCTCTCACACCGCGTGCCTCGTGCTGAAGACAATCCAACCACTTGCCAGGAAATGGGAGGAGCCTGAGGCTGTCTGGATGGAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR TCA 90 bp | GGTTACAGGTTCATTGCAGGGAAGTCTAGGCAGAGGGTGGAGCAGTaGGTAGCGCTCAGGAGCAGACATAGTGCATGTGTTCTTGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: GYRFIAGKSRQRVEQ*VALRSRHSACVLVL Trigger: GAGCACAAGAACACATGCACTATGTCTGCTCCTGAGCGCTACTCACTGCTCCACCCTCTGCCTAGACTTCCCTGCAATGAACCTGTAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR CCA 90 bp | TCCCAGTGTGGTGCAGGGCGCAGTGAACACAGGAAGTGTGTTTTCTaGGCATCTCTCTTGGACTGGTCCAAGAGGAGCCATCTTCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: SQCGAGRSEHRKCVF*ASLLDWSKRSHLPK Trigger: TTTTGGAAGATGGCTCCTCTTGGACCAGTCCAAGAGAGATGCCCAGAAAACACACTTCCTGTGTTCACTGCGCCCTGCACCACACTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR CCA 90 bp | CGCAGTGAACACAGGAAGTGTGTTTTCTGGGCATCTCTCTTGGACTaGTCCAAGAGGAGCCATCTTCCAAAAACACTTCCGGTTAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: RSEHRKCVFWASLLD*SKRSHLPKTLPVSQ Trigger: CTGGCTAACCGGAAGTGTTTTTGGAAGATGGCTCCTCTTGGACCAGTCCAAGAGAGATGCCCAGAAAACACACTTCCTGTGTTCACTGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR GCA 90 bp | CAAGCCCTAGAGGCTAACAGTTGGTCAGTAGTTATCTGTTGTGCTTaGTGGAACTCACTGGGCTCACCCACCTGCTTTGTTTACAGTTTG | + |
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Preference number: 1 (lower is better) Translates to: QALEANSWSVVICCA*WNSLGSPTCFVYSL Trigger: CAAACTGTAAACAAAGCAGGTGGGTGAGCCCAGTGAGTTCCAGCAAGCACAACAGATAACTACTGACCAACTGTTAGCCTCTAGGGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR GCA 90 bp | TTGCTCTTTAAACAGCCCAGGATCCTCCGCCTAGGGGAGGAATGGTaGCAACTTATAGTAGGCACAATCAAGATAACCCTCCACAGACAT | + |
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Preference number: 1 (lower is better) Translates to: LLFKQPRILRLGEEW*QLIVGTIKITLHRH Trigger: ATGTCTGTGGAGGGTTATCTTGATTGTGCCTACTATAAGTTGGCACCATTCCTCCCCTAGGCGGAGGATCCTGGGCTGTTTAAAGAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR CCA 90 bp | TGTTTGCTCTTTAAACAGCCCAGGATCCTCCGCCTAGGGGAGGAATaGTGCCAACTTATAGTAGGCACAATCAAGATAACCCTCCACAGA | + |
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Preference number: 1 (lower is better) Translates to: CLLFKQPRILRLGEE*CQLIVGTIKITLHR Trigger: TCTGTGGAGGGTTATCTTGATTGTGCCTACTATAAGTTGGCACCATTCCTCCCCTAGGCGGAGGATCCTGGGCTGTTTAAAGAGCAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR CAA 90 bp | TCCAGACAGCCTCAGGCTCCTCCCATTTCCTGGCAAGTGGTTGGATaGTCTTCAGCACGAGGCACGCGGTGTGAGAGGGAAGCCAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SRQPQAPPISWQVVG*SSARGTRCEREASE Trigger: CTCACTGGCTTCCCTCTCACACCGCGTGCCTCGTGCTGAAGACAATCCAACCACTTGCCAGGAAATGGGAGGAGCCTGAGGCTGTCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR-3UTR TCA 90 bp | TGCAGGGCTGCCATTCTTGCTAGTCTTCCTGTGCCCTGGGAGAGAGCCAATGCCTGGTGCAGGGCGCAGTaGACACAGGAAGTGTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: CRAAILASLPVPWERANAWCRAQ*TQEVCF Trigger: AAAACACACTTCCTGTGTTCACTGCGCCCTGCACCA...GGCATTGGCTCTCTCCCAGGGCACAGGAAGACTAGCAAGAATGGCAGCCCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR CAA 90 bp | GCTTGCTGGAACTCACTGGGCTCACCCACCTGCTTTGTTTACAGTTaGGACTGCAGGGCTGCCATTCTTGCTAGTCTTCCTGTGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: ACWNSLGSPTCFVYS*DCRAAILASLPVPW Trigger: CCAGGGCACAGGAAGACTAGCAAGAATGGCAGCCCTGCAGTCCAAACTGTAAACAAAGCAGGTGGGTGAGCCCAGTGAGTTCCAGCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR CAA 90 bp | CACCCACCTGCTTTGTTTACAGTTTGGACTGCAGGGCTGCCATTCTaGCTAGTCTTCCTGTGCCCTGGGAGAGAGCCAATGCCATGCCTA | + |
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Preference number: 2 (lower is better) Translates to: HPPALFTVWTAGLPF*LVFLCPGREPMPCL Trigger: TAGGCATGGCATTGGCTCTCTCCCAGGGCACAGGAAGACTAGCAAGAATGGCAGCCCTGCAGTCCAAACTGTAAACAAAGCAGGTGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGCTCCTCCCATTTCCTGGCAAGTGGTTGGATTGTCTTCAGCACGAGGCAGCATCTCTCTTGGACTaGTCCAAGAGGAGCCATCTT | + |
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Preference number: 2 (lower is better) Translates to: LRLLPFPGKWLDCLQHEAASLLD*SKRSHL Trigger: AAGATGGCTCCTCTTGGACCAGTCCAAGAGAGATGC...TGCCTCGTGCTGAAGACAATCCAACCACTTGCCAGGAAATGGGAGGAGCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR CAA 90 bp | TCAGGAGCAGACATAGTGCATGTGTTCTTGTGCTCAGCTCTTTGTTaGCTCTTTAAACAGCCCAGGATCCTCCGCCTAGGGGAGGAATGG | + |
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Preference number: 2 (lower is better) Translates to: SGADIVHVFLCSALC*LFKQPRILRLGEEW Trigger: CCATTCCTCCCCTAGGCGGAGGATCCTGGGCTGTTTAAAGAGCAAACAAAGAGCTGAGCACAAGAACACATGCACTATGTCTGCTCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR-3UTR GCA 90 bp | TCCAGACAGCCTCAGGCTCCTCCCATTTCCTGGCAAGTGGTTGGATTGTCTTCATCTTGGCCCACTAATTaGAAACATGACTCTGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: SRQPQAPPISWQVVGLSSSWPTN*KHDSGH Trigger: GTGACCAGAGTCATGTTTGCAATTAGTGGGCCAAGA...TGAAGACAATCCAACCACTTGCCAGGAAATGGGAGGAGCCTGAGGCTGTCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGGCCAATAGGGAAATTCTCTTGGTGAAAGTCCTGAACCCAAGCCCTAGAGCTTTGTTTACAGTTTaGACTGCAGGGCTGCCATTC | + |
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Preference number: 2 (lower is better) Translates to: QVANREILLVKVLNPSPRALFTV*TAGLPF Trigger: GAATGGCAGCCCTGCAGTCCAAACTGTAAACAAAGC...TCTAGGGCTTGGGTTCAGGACTTTCACCAAGAGAATTTCCCTATTGGCCACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR CAA 90 bp | ATCTCAAGGAGAGGCCCTTTCCACGTGACTCTAGATCATGCTGAGTaGCCAATCAAAGCTAAGCATCACTTAAAGAAGGCTATCATCTCC | + |
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Preference number: 2 (lower is better) Translates to: ISRRGPFHVTLDHAE*PIKAKHHLKKAIIS Trigger: GGAGATGATAGCCTTCTTTAAGTGATGCTTAGCTTTGATTGGCAACTCAGCATGATCTAGAGTCACGTGGAAAGGGCCTCTCCTTGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR-3UTR GCA 90 bp | ATAGTGCATGTGTTCTTGTGCTCAGCTCTTTGTTTGCTCTTTAAACAGCCCAGGGTTTACAGTTTGGACTaGAGGGCTGCCATTCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: IVHVFLCSALCLLFKQPRVYSLD*RAAILA Trigger: AGCAAGAATGGCAGCCCTGCAGTCCAAACTGTAAAC...CCTGGGCTGTTTAAAGAGCAAACAAAGAGCTGAGCACAAGAACACATGCACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR-3UTR CCA 90 bp | ATAGTGCATGTGTTCTTGTGCTCAGCTCTTTGTTTGCTCTTTAAACAGCCCAGGAGGAAGTGTGTTTTCTaGGCATCTCTCTTGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: IVHVFLCSALCLLFKQPRRKCVF*ASLLDW Trigger: CCAGTCCAAGAGAGATGCCCAGAAAACACACTTCCT...CCTGGGCTGTTTAAAGAGCAAACAAAGAGCTGAGCACAAGAACACATGCACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR-3UTR TCA 90 bp | TTGTGCTTGCTGGAACTCACTGGGCTCACCCACCTGCTTTGTTTACAGTTTGGACACTTAGAGTCAATGTaGCCCTGTTCTATAAAAACA | + |
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Preference number: 2 (lower is better) Translates to: LCLLELTGLTHLLCLQFGHLESM*PCSIKT Trigger: TGTTTTTATAGAACAGGGTCACATTGACTCTAAGTG...TCCAAACTGTAAACAAAGCAGGTGGGTGAGCCCAGTGAGTTCCAGCAAGCACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGAGAGCCAATGCCATGCCTAGACTTAAAATACTAGGTCTAAGCCTAGAATTTCAAGCAATAAGCTaGAGGCAGGCAGGAGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: WERANAMPRLKILGLSLEFQAIS*RQAGVQ Trigger: TTGAACTCCTGCCTGCCTCCAGCTTATTGCTTGAAA...TTCTAGGCTTAGACCTAGTATTTTAAGTCTAGGCATGGCATTGGCTCTCTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR GCA 72 bp | AGGCAGGCAGGAGTTCAAGCGCAGGGTCCTCCAGCCTaGATAGGATCCTCCAGCACTCCCATCCACTTAGAG | + |
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Preference number: 3 (lower is better) Translates to: RQAGVQAQGPPA*IGSSSTPIHLE Trigger: CTCTAAGTGGATGGGAGTGCTGGAGGATCCTATGCAGGCTGGAGGACCCTGCGCTTGAACTCCTGCCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR CCA 72 bp | CCAGACAGCCTCAGGCTCCTCCCATTTCCTGGCAAGTaGTTGGATTGTCTTCAGCACGAGGCACGCGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: PDSLRLLPFPGK*LDCLQHEARGV Trigger: CACACCGCGTGCCTCGTGCTGAAGACAATCCAACCACTTGCCAGGAAATGGGAGGAGCCTGAGGCTGTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR-3UTR CAA 90 bp | CTCAGGCTCCTCCCATTTCCTGGCAAGTGGTTGGATTGTCTTCAGCACGAGGCAGCTCACCCACCTGCTTaGTTTACAGTTTGGACTGCA | + |
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Preference number: 3 (lower is better) Translates to: LRLLPFPGKWLDCLQHEAAHPPA*FTVWTA Trigger: TGCAGTCCAAACTGTAAACAAAGCAGGTGGGTGAGC...TGCCTCGTGCTGAAGACAATCCAACCACTTGCCAGGAAATGGGAGGAGCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR TCA 72 bp | TTCATTGCAGGGAAGTCTAGGCAGAGGGTGGAGCAGTaGGTAGCGCTCAGGAGCAGACATAGTGCATGTGTT | + |
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Preference number: 3 (lower is better) Translates to: FIAGKSRQRVEQ*VALRSRHSACV Trigger: AACACATGCACTATGTCTGCTCCTGAGCGCTACTCACTGCTCCACCCTCTGCCTAGACTTCCCTGCAATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR CCA 72 bp | ACTCACTGGGCTCACCCACCTGCTTTGTTTACAGTTTaGACTGCAGGGCTGCCATTCTTGCTAGTCTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: THWAHPPALFTV*TAGLPFLLVFL Trigger: CAGGAAGACTAGCAAGAATGGCAGCCCTGCAGTCCAAACTGTAAACAAAGCAGGTGGGTGAGCCCAGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR GCA 72 bp | AAACAGCCCAGGATCCTCCGCCTAGGGGAGGAATGGTaGCAACTTATAGTAGGCACAATCAAGATAACCCTC | + |
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Preference number: 3 (lower is better) Translates to: KQPRILRLGEEW*QLIVGTIKITL Trigger: GAGGGTTATCTTGATTGTGCCTACTATAAGTTGGCACCATTCCTCCCCTAGGCGGAGGATCCTGGGCTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR CCA 72 bp | TGCAGGGCTGCCATTCTTGCTAGTCTTCCTGTGCCCTaGGAGAGAGCCAATGCCATGCCTAGACTTAAAATA | + |
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Preference number: 3 (lower is better) Translates to: CRAAILASLPVP*ERANAMPRLKI Trigger: TATTTTAAGTCTAGGCATGGCATTGGCTCTCTCCCAGGGCACAGGAAGACTAGCAAGAATGGCAGCCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR CCA 72 bp | CACAGGAAGTGTGTTTTCTGGGCATCTCTCTTGGACTaGTCCAAGAGGAGCCATCTTCCAAAAACACTTCCG | + |
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Preference number: 3 (lower is better) Translates to: HRKCVFWASLLD*SKRSHLPKTLP Trigger: CGGAAGTGTTTTTGGAAGATGGCTCCTCTTGGACCAGTCCAAGAGAGATGCCCAGAAAACACACTTCCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR CCA 72 bp | GCTAACAGTTGGTCAGTAGTTATCTGTTGTGCTTGCTaGAACTCACTGGGCTCACCCACCTGCTTTGTTTAC | + |
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Preference number: 3 (lower is better) Translates to: ANSWSVVICCAC*NSLGSPTCFVY Trigger: GTAAACAAAGCAGGTGGGTGAGCCCAGTGAGTTCCAGCAAGCACAACAGATAACTACTGACCAACTGTTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR CCA 72 bp | TTTAAACAGCCCAGGATCCTCCGCCTAGGGGAGGAATaGTGCCAACTTATAGTAGGCACAATCAAGATAACC | + |
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Preference number: 3 (lower is better) Translates to: FKQPRILRLGEE*CQLIVGTIKIT Trigger: GGTTATCTTGATTGTGCCTACTATAAGTTGGCACCATTCCTCCCCTAGGCGGAGGATCCTGGGCTGTTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR-3UTR CAA 90 bp | CTAGATCATGCTGAGTTGCCAATCAAAGCTAAGCATCACTTAAAGAAGGCTATCTTCTGGGCATCTCTCTaGGACTGGTCCAAGAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: LDHAELPIKAKHHLKKAIFWASL*DWSKRS Trigger: GCTCCTCTTGGACCAGTCCAAGAGAGATGCCCAGAA...GATAGCCTTCTTTAAGTGATGCTTAGCTTTGATTGGCAACTCAGCATGATCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| 3UTR TCA 72 bp | GGATCCTCCAGCACTCCCATCCACTTAGAGTCAATGTaGCCCTGTTCTATAAAAACAAAAGGAGTCCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: GSSSTPIHLESM*PCSIKTKGVQP Trigger: TGGCTGGACTCCTTTTGTTTTTATAGAACAGGGTCACATTGACTCTAAGTGGATGGGAGTGCTGGAGGATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR TCA 90 bp | AGGCAGGCAGGAGTTCAAGCGCAGGGTCCTCCAGCCTGCATAGGATCCTCCAGCCAGCTGCTCCACCGCTaGCTGTCCCACACCCATGTC | + |
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Preference number: 4 (lower is better) Translates to: RQAGVQAQGPPACIGSSSQLLHR*LSHTHV Trigger: GACATGGGTGTGGGACAGTCAGCGGTGGAGCAGCTG...GCTGGAGGATCCTATGCAGGCTGGAGGACCCTGCGCTTGAACTCCTGCCTGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR GCA 90 bp | TGCAGGGCTGCCATTCTTGCTAGTCTTCCTGTGCCCTGGGAGAGAGCCAATGCCCTGCATGGGAGAGCGTaGCCTCTCCAGGCACAGCTT | + |
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Preference number: 4 (lower is better) Translates to: CRAAILASLPVPWERANALHGRA*PLQAQL Trigger: AAGCTGTGCCTGGAGAGGGCACGCTCTCCCATGCAG...GGCATTGGCTCTCTCCCAGGGCACAGGAAGACTAGCAAGAATGGCAGCCCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR GCA 90 bp | CTCCTCCCATTTCCTGGCAAGTGGTTGGATTGTCTTCAGCACGAGGCACGCGGTTTCTTGGGGAGGCAATaGTGGGAGCCAGAGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LLPFPGKWLDCLQHEARGFLGRQ*WEPEVW Trigger: CCAGACCTCTGGCTCCCAGCATTGCCTCCCCAAGAA...ACCGCGTGCCTCGTGCTGAAGACAATCCAACCACTTGCCAGGAAATGGGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR CCA 90 bp | AAGCTGGAGGCAGGCAGGAGTTCAAGCGCAGGGTCCTCCAGCCTGCATAGGATCTCAGACCGCTGGCTCTaGAGTAGGAGCTCAATTTGC | + |
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Preference number: 4 (lower is better) Translates to: KLEAGRSSSAGSSSLHRISDRWL*SRSSIC Trigger: GCAAATTGAGCTCCTACTCCAGAGCCAGCGGTCTGA...GATCCTATGCAGGCTGGAGGACCCTGCGCTTGAACTCCTGCCTGCCTCCAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR CCA 90 bp | AAGCTGGAGGCAGGCAGGAGTTCAAGCGCAGGGTCCTCCAGCCTGCATAGGATCAGGCTCGTGATCTCCTaGTCAGCACTTTGTAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: KLEAGRSSSAGSSSLHRIRLVIS*SALCKS Trigger: GGACTTACAAAGTGCTGACCAGGAGATCACGAGCCT...GATCCTATGCAGGCTGGAGGACCCTGCGCTTGAACTCCTGCCTGCCTCCAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR CCA 90 bp | AGGCAGGCAGGAGTTCAAGCGCAGGGTCCTCCAGCCTGCATAGGATCCTCCAGCAGGCTCAAGGTTCCCTaGAGGATCATCAGCTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: RQAGVQAQGPPACIGSSSRLKVP*RIISFF Trigger: AAAGAAGCTGATGATCCTCCAGGGAACCTTGAGCCT...GCTGGAGGATCCTATGCAGGCTGGAGGACCCTGCGCTTGAACTCCTGCCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR TCA 90 bp | TGCTTGCTGGAACTCACTGGGCTCACCCACCTGCTTTGTTTACAGTTTGGACTGGCCACGTCACGGGAGTaGTCGAAGAAGTCGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: CLLELTGLTHLLCLQFGLATSRE*SKKSEQ Trigger: CTGCTCCGACTTCTTCGATCACTCCCGTGACGTGGC...CAGTCCAAACTGTAAACAAAGCAGGTGGGTGAGCCCAGTGAGTTCCAGCAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR CCA 90 bp | AGGCAGGCAGGAGTTCAAGCGCAGGGTCCTCCAGCCTGCATAGGATCCTCCAGCACATTCTCCTCTTCCTaGGCGAGGTCAAAGAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: RQAGVQAQGPPACIGSSSTFSSS*ARSKKS Trigger: ACTTTTCTTTGACCTCGCCCAGGAAGAGGAGAATGT...GCTGGAGGATCCTATGCAGGCTGGAGGACCCTGCGCTTGAACTCCTGCCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR CCA 90 bp | TGCTTGCTGGAACTCACTGGGCTCACCCACCTGCTTTGTTTACAGTTTGGACTGCCACCCAGTGAGAGCTaGGACTCCGGCTTGGAGACT | + |
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Preference number: 4 (lower is better) Translates to: CLLELTGLTHLLCLQFGLPPSES*DSGLET Trigger: AGTCTCCAAGCCGGAGTCCCAGCTCTCACTGGGTGG...CAGTCCAAACTGTAAACAAAGCAGGTGGGTGAGCCCAGTGAGTTCCAGCAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR TCA 90 bp | TGCAGGGCTGCCATTCTTGCTAGTCTTCCTGTGCCCTGGGAGAGAGCCAATGCCTCTTTCTTAGGCTCGTaGTCTCCTGGTCAGCACTTT | + |
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Preference number: 4 (lower is better) Translates to: CRAAILASLPVPWERANASFLGS*SPGQHF Trigger: AAAGTGCTGACCAGGAGATCACGAGCCTAAGAAAGA...GGCATTGGCTCTCTCCCAGGGCACAGGAAGACTAGCAAGAATGGCAGCCCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR GCA 90 bp | TTGTGCTTGCTGGAACTCACTGGGCTCACCCACCTGCTTTGTTTACAGTTTGGACAGTACACAGCCAGCTaGTCCACCGCTGACTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LCLLELTGLTHLLCLQFGQYTAS*STADCP Trigger: GGGACAGTCAGCGGTGGAGCAGCTGGCTGTGTACTG...TCCAAACTGTAAACAAAGCAGGTGGGTGAGCCCAGTGAGTTCCAGCAAGCACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR CCA 90 bp | TGCTTGCTGGAACTCACTGGGCTCACCCACCTGCTTTGTTTACAGTTTGGACTGTCCACCTCAGACCGCTaGCTCTGGAGTAGGAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: CLLELTGLTHLLCLQFGLSTSDR*LWSRSS Trigger: TGAGCTCCTACTCCAGAGCCAGCGGTCTGAGGTGGA...CAGTCCAAACTGTAAACAAAGCAGGTGGGTGAGCCCAGTGAGTTCCAGCAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR CCA 90 bp | CTCAGGCTCCTCCCATTTCCTGGCAAGTGGTTGGATTGTCTTCAGCACGAGGCATGGGAGCCAGAGGTCTaGGTTGGAGGGGTATTTACA | + |
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Preference number: 4 (lower is better) Translates to: LRLLPFPGKWLDCLQHEAWEPEV*VGGVFT Trigger: TGTAAATACCCCTCCAACCCAGACCTCTGGCTCCCA...TGCCTCGTGCTGAAGACAATCCAACCACTTGCCAGGAAATGGGAGGAGCCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR TCA 90 bp | CTCAGGCTCCTCCCATTTCCTGGCAAGTGGTTGGATTGTCTTCAGCACGAGGCATCTTTCTGGGAAAGCTaGGCTTTGACGCTGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LRLLPFPGKWLDCLQHEASFWES*ALTLSS Trigger: ACTGGACAGCGTCAAAGCTCAGCTTTCCCAGAAAGA...TGCCTCGTGCTGAAGACAATCCAACCACTTGCCAGGAAATGGGAGGAGCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR TCA 90 bp | CTCAGGCTCCTCCCATTTCCTGGCAAGTGGTTGGATTGTCTTCAGCACGAGGCACTTTGTGCACCTTCTTaGGGACATTCTGCATGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LRLLPFPGKWLDCLQHEALCAPS*GHSAWE Trigger: CTCCCATGCAGAATGTCCTCAAGAAGGTGCACAAAG...TGCCTCGTGCTGAAGACAATCCAACCACTTGCCAGGAAATGGGAGGAGCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR GCA 90 bp | TCCAGACAGCCTCAGGCTCCTCCCATTTCCTGGCAAGTGGTTGGATTGTCTTCATGTTTGGTCTCATCCTaGCGCTGCTCCAGGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRQPQAPPISWQVVGLSSCLVSS*RCSRNF Trigger: GAAGTTCCTGGAGCAGCGGCAGGATGAGACCAAACA...TGAAGACAATCCAACCACTTGCCAGGAAATGGGAGGAGCCTGAGGCTGTCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CCA 90 bp | TGTGCTTGCTGGAACTCACTGGGCTCACCCACCTGCTTTGTTTACAGTTTGGACTGGGCAGGTCCGACTTaGTGCTGTCTCAAACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CACWNSLGSPTCFVYSLDWAGPT*CCLKPL Trigger: CAGTGGTTTGAGACAGCACCAAGTCGGACCTGCCCA...GTCCAAACTGTAAACAAAGCAGGTGGGTGAGCCCAGTGAGTTCCAGCAAGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTGCTGGAACTCACTGGGCTCACCCACCTGCTTTGTTTACAGTTTGGACTGGTGTCGATAATGGCCTaGCTGTCCCGTTTCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLLELTGLTHLLCLQFGLVSIMA*LSRFSL Trigger: CAGGGAGAAACGGGACAGCCAGGCCATTATCGACAC...CAGTCCAAACTGTAAACAAAGCAGGTGGGTGAGCCCAGTGAGTTCCAGCAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| 3UTR CAA 72 bp | GCTTTGTTTACAGTTTGGACTGCAGGGCTGCCATTCTaGCTAGTCTTCCTGTGCCCTGGGAGAGAGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: ALFTVWTAGLPF*LVFLCPGREPM Trigger: CATTGGCTCTCTCCCAGGGCACAGGAAGACTAGCAAGAATGGCAGCCCTGCAGTCCAAACTGTAAACAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR TCA 90 bp | TGCTTGCTGGAACTCACTGGGCTCACCCACCTGCTTTGTTTACAGTTTGGACTGGGGAAAGCTGAGCTTTaGCGCTGTCCAGTTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLLELTGLTHLLCLQFGLGKAEL*RCPVHS Trigger: AGAATGAACTGGACAGCGTCAAAGCTCAGCTTTCCC...CAGTCCAAACTGTAAACAAAGCAGGTGGGTGAGCCCAGTGAGTTCCAGCAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CCA 90 bp | GCCCTAGAGGCTAACAGTTGGTCAGTAGTTATCTGTTGTGCTTGCTGGAACTCACTGGATTCTACACTGTaGGCAGGTCCGACTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALEANSWSVVICCACWNSLDSTL*AGPTWC Trigger: GCACCAAGTCGGACCTGCCCACAGTGTAGAATCCAG...TGAGTTCCAGCAAGCACAACAGATAACTACTGACCAACTGTTAGCCTCTAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CCA 90 bp | GCCCTAGAGGCTAACAGTTGGTCAGTAGTTATCTGTTGTGCTTGCTGGAACTCACTGCTGTGGTCCTGTTaGGCTGTTTCTGACCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALEANSWSVVICCACWNSLLWSC*AVSDPG Trigger: TCCTGGGTCAGAAACAGCCCAACAGGACCACAGCAG...TGAGTTCCAGCAAGCACAACAGATAACTACTGACCAACTGTTAGCCTCTAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CCA 90 bp | CAAGTGGCCAATAGGGAAATTCTCTTGGTGAAAGTCCTGAACCCAAGCCCTAGAGTATCCAGCTTGGGCTaGGAGGCAGAACTCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QVANREILLVKVLNPSPRVSSLG*EAELTV Trigger: GACTGTGAGTTCTGCCTCCCAGCCCAAGCTGGATAC...TCTAGGGCTTGGGTTCAGGACTTTCACCAAGAGAATTTCCCTATTGGCCACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| 3UTR CAA 72 bp | AACTCACTGGGCTCACCCACCTGCTTTGTTTACAGTTaGGACTGCAGGGCTGCCATTCTTGCTAGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NSLGSPTCFVYS*DCRAAILASLP Trigger: AGGAAGACTAGCAAGAATGGCAGCCCTGCAGTCCAAACTGTAAACAAAGCAGGTGGGTGAGCCCAGTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCTTGCTGGAACTCACTGGGCTCACCCACCTGCTTTGTTTACAGTTTGGACAGTTCTAACTTGGCCTaGTCCAGCTCAGTGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CACWNSLGSPTCFVYSLDSSNLA*SSSVLR Trigger: TCTCAACACTGAGCTGGATCAGGCCAAGTTAGAACT...GTCCAAACTGTAAACAAAGCAGGTGGGTGAGCCCAGTGAGTTCCAGCAAGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR GCA 90 bp | TGTGCTTGCTGGAACTCACTGGGCTCACCCACCTGCTTTGTTTACAGTTTGGACGGCTTGGAGACTTTGTaGACCTTCTTGAGGACATTC | + |
|
Preference number: 4 (lower is better) Translates to: CACWNSLGSPTCFVYSLDGLETL*TFLRTF Trigger: GAATGTCCTCAAGAAGGTGCACAAAGTCTCCAAGCC...GTCCAAACTGTAAACAAAGCAGGTGGGTGAGCCCAGTGAGTTCCAGCAAGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CCA 90 bp | ATAGTGCATGTGTTCTTGTGCTCAGCTCTTTGTTTGCTCTTTAAACAGCCCAGGTCTCCTACACATCGCTaGCCACCCAGTGAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IVHVFLCSALCLLFKQPRSPTHR*PPSESW Trigger: CCAGCTCTCACTGGGTGGCCAGCGATGTGTAGGAGA...CCTGGGCTGTTTAAAGAGCAAACAAAGAGCTGAGCACAAGAACACATGCACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| 3UTR CAA 72 bp | GACATAGTGCATGTGTTCTTGTGCTCAGCTCTTTGTTaGCTCTTTAAACAGCCCAGGATCCTCCGCCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DIVHVFLCSALC*LFKQPRILRLG Trigger: CCCTAGGCGGAGGATCCTGGGCTGTTTAAAGAGCAAACAAAGAGCTGAGCACAAGAACACATGCACTATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CCA 90 bp | TTGTGCTTGCTGGAACTCACTGGGCTCACCCACCTGCTTTGTTTACAGTTTGGAACCTCAGTTCTAACTTaGCCTGATCCAGCTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCLLELTGLTHLLCLQFGTSVLT*PDPAQC Trigger: ACACTGAGCTGGATCAGGCCAAGTTAGAACTGAGGT...TCCAAACTGTAAACAAAGCAGGTGGGTGAGCCCAGTGAGTTCCAGCAAGCACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CCA 90 bp | CTAGATCATGCTGAGTTGCCAATCAAAGCTAAGCATCACTTAAAGAAGGCTATCCCAGGCACAGCTTCTTaGGGAGGCAATGCTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LDHAELPIKAKHHLKKAIPGTAS*GGNAGS Trigger: GCTCCCAGCATTGCCTCCCCAAGAAGCTGTGCCTGG...GATAGCCTTCTTTAAGTGATGCTTAGCTTTGATTGGCAACTCAGCATGATCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CCA 90 bp | TGGGAGAGAGCCAATGCCATGCCTAGACTTAAAATACTAGGTCTAAGCCTAGAAGCTGGGACTCCGGCTTaGAGACTTTGTGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WERANAMPRLKILGLSLEAGTPA*RLCAPS Trigger: AGAAGGTGCACAAAGTCTCCAAGCCGGAGTCCCAGC...TTCTAGGCTTAGACCTAGTATTTTAAGTCTAGGCATGGCATTGGCTCTCTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR TCA 90 bp | CAAGTGGCCAATAGGGAAATTCTCTTGGTGAAAGTCCTGAACCCAAGCCCTAGAATTAGGCATTGCAGATaGAAAGTGTGGCCACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVANREILLVKVLNPSPRIRHCR*KVWPQW Trigger: CCACTGTGGCCACACTTTTCATCTGCAATGCCTAAT...TCTAGGGCTTGGGTTCAGGACTTTCACCAAGAGAATTTCCCTATTGGCCACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR GCA 90 bp | TGGGAGAGAGCCAATGCCATGCCTAGACTTAAAATACTAGGTCTAAGCCTAGAAGTCTCATCCTGCCGCTaGTCCAGGAACTTCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WERANAMPRLKILGLSLEVSSCR*SRNFIC Trigger: ACAGATGAAGTTCCTGGAGCAGCGGCAGGATGAGAC...TTCTAGGCTTAGACCTAGTATTTTAAGTCTAGGCATGGCATTGGCTCTCTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CCA 90 bp | CAAGTGGCCAATAGGGAAATTCTCTTGGTGAAAGTCCTGAACCCAAGCCCTAGAGCCAGAGGTCTGGGTTaGAGGGGTATTTACATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QVANREILLVKVLNPSPRARGLG*RGIYIK Trigger: TTTGATGTAAATACCCCTCCAACCCAGACCTCTGGC...TCTAGGGCTTGGGTTCAGGACTTTCACCAAGAGAATTTCCCTATTGGCCACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CCA 90 bp | TGGGAGAGAGCCAATGCCATGCCTAGACTTAAAATACTAGGTCTAAGCCTAGAAAGAAGGTATCCAGCTTaGGCTGGGAGGCAGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: WERANAMPRLKILGLSLERRYPA*AGRQNS Trigger: TGAGTTCTGCCTCCCAGCCCAAGCTGGATACCTTCT...TTCTAGGCTTAGACCTAGTATTTTAAGTCTAGGCATGGCATTGGCTCTCTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CCA 90 bp | GCCCTAGAGGCTAACAGTTGGTCAGTAGTTATCTGTTGTGCTTGCTGGAACTCACTTTGTAAGTCCTTCTaGGCTGACCTCAGTTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALEANSWSVVICCACWNSLCKSF*ADLSSN Trigger: GTTAGAACTGAGGTCAGCCCAGAAGGACTTACAAAG...TGAGTTCCAGCAAGCACAACAGATAACTACTGACCAACTGTTAGCCTCTAGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| 3UTR CAA 72 bp | AGTGAACACAGGAAGTGTGTTTTCTGGGCATCTCTCTaGGACTGGTCCAAGAGGAGCCATCTTCCAAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SEHRKCVFWASL*DWSKRSHLPKT Trigger: TGTTTTTGGAAGATGGCTCCTCTTGGACCAGTCCAAGAGAGATGCCCAGAAAACACACTTCCTGTGTTCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR TCA 90 bp | GCCCTAGAGGCTAACAGTTGGTCAGTAGTTATCTGTTGTGCTTGCTGGAACTCACATCAAAGGTGGTATTaGGATCAATCTCATCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: ALEANSWSVVICCACWNSHQRWY*DQSHHR Trigger: TCGGTGATGAGATTGATCTCAATACCACCTTTGATG...TGAGTTCCAGCAAGCACAACAGATAACTACTGACCAACTGTTAGCCTCTAGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| 3UTR CAA 72 bp | AGAGGCCCTTTCCACGTGACTCTAGATCATGCTGAGTaGCCAATCAAAGCTAAGCATCACTTAAAGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGPFHVTLDHAE*PIKAKHHLKKA Trigger: AGCCTTCTTTAAGTGATGCTTAGCTTTGATTGGCAACTCAGCATGATCTAGAGTCACGTGGAAAGGGCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| 3UTR CAA 72 bp | TTTTATTTTAGCTTCAAGATTCAGGTTACAGGTTCATaGCAGGGAAGTCTAGGCAGAGGGTGGAGCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FYFSFKIQVTGS*QGSLGRGWSSE Trigger: CTCACTGCTCCACCCTCTGCCTAGACTTCCCTGCAATGAACCTGTAACCTGAATCTTGAAGCTAAAATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTAAGGTTTTGGTACAAATTTATACAGCCAGAGCCTAGAAGAAAAGATGCCGCAGGTCCGACTTGGTaGTGTCTCAAACCACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLRFWYKFIQPEPRRKDAAGPTW*CLKPLD Trigger: ATCCAGTGGTTTGAGACAGCACCAAGTCGGACCTGC...GGCATCTTTTCTTCTAGGCTCTGGCTGTATAAATTTGTACCAAAACCTTAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS CCA 90 bp | GAAGGGTGGCTGGTGAAGCCTCGGGTTCATCATCTCCACAGGGGCTaGGCTCTCAAAAACCAGGCGGCTGACCGTCTCATTGGTCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: EGWLVKPRVHHLHRG*ALKNQAADRLIGRR Trigger: CCGGCGACCAATGAGACGGTCAGCCGCCTGGTTTTTGAGAGCCCAGCCCCTGTGGAGATGATGAACCCGAGGCTTCACCAGCCACCCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGAGGCAGGCAGGAGTTCAAGCGCAGGGTCCTCCAGCCTGCATAGGATCGGCCTCCTCCCGAGCTaGTTTGGTCTCATCCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KLEAGRSSSAGSSSLHRIGLLPS*FGLILP Trigger: CGGCAGGATGAGACCAAACAAGCTCGGGAGGAGGCC...GATCCTATGCAGGCTGGAGGACCCTGCGCTTGAACTCCTGCCTGCCTCCAGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGCAGGAGTTCAAGCGCAGGGTCCTCCAGCCTGCATAGGATCCTCCAGCTCCAGGCACAGCTTCTaGGGGAGGCAATGCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RQAGVQAQGPPACIGSSSSRHSF*GRQCWE Trigger: CTCCCAGCATTGCCTCCCCAAGAAGCTGTGCCTGGA...GCTGGAGGATCCTATGCAGGCTGGAGGACCCTGCGCTTGAACTCCTGCCTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS TCA 90 bp | GGTTCATCATCTCCACAGGGGCTGGGCTCTCAAAAACCAGGCGGCTaGCCGTCTCATTGGTCGCCGGAGGCAGGCTCAAGGTTCCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSSSPQGLGSQKPGG*PSHWSPEAGSRFPG Trigger: TCCAGGGAACCTTGAGCCTGCCTCCGGCGACCAATGAGACGGTCAGCCGCCTGGTTTTTGAGAGCCCAGCCCCTGTGGAGATGATGAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS CCA 90 bp | GGACATTCTGCATGGGAGAGCGTGCCCTCTCCAGGCACAGCTTCTTaGGGAGGCAATGCTGGGAGCCAGAGGTCTGGGTTGGAGGGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GHSAWESVPSPGTAS*GGNAGSQRSGLEGY Trigger: ATACCCCTCCAACCCAGACCTCTGGCTCCCAGCATTGCCTCCCCAAGAAGCTGTGCCTGGAGAGGGCACGCTCTCCCATGCAGAATGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGCAGGAGTTCAAGCGCAGGGTCCTCCAGCCTGCATAGGATCCTCCAGCGTGGGCAGGTCCGACTaGGTGCTGTCTCAAACCACT | + |
|
Preference number: 5 (lower is better) Translates to: RQAGVQAQGPPACIGSSSVGRSD*VLSQTT Trigger: AGTGGTTTGAGACAGCACCAAGTCGGACCTGCCCAC...GCTGGAGGATCCTATGCAGGCTGGAGGACCCTGCGCTTGAACTCCTGCCTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS CCA 90 bp | GGGAAGGCACCAGCCAGTTCCTCATCTAGCTCTCCTACACATCGCTaGCCACCCAGTGAGAGCTGGGACTCCGGCTTGGAGACTTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GKAPASSSSSSPTHR*PPSESWDSGLETLC Trigger: GCACAAAGTCTCCAAGCCGGAGTCCCAGCTCTCACTGGGTGGCCAGCGATGTGTAGGAGAGCTAGATGAGGAACTGGCTGGTGCCTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS TCA 90 bp | CCAGTGAGAGCTGGGACTCCGGCTTGGAGACTTTGTGCACCTTCTTaGGGACATTCTGCATGGGAGAGCGTGCCCTCTCCAGGCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PVRAGTPAWRLCAPS*GHSAWESVPSPGTA Trigger: AGCTGTGCCTGGAGAGGGCACGCTCTCCCATGCAGAATGTCCTCAAGAAGGTGCACAAAGTCTCCAAGCCGGAGTCCCAGCTCTCACTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS GCA 90 bp | GGAGACTTTGTGCACCTTCTTGAGGACATTCTGCATGGGAGAGCGTaGCCTCTCCAGGCACAGCTTCTTGGGGAGGCAATGCTGGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GDFVHLLEDILHGRA*PLQAQLLGEAMLGA Trigger: GGCTCCCAGCATTGCCTCCCCAAGAAGCTGTGCCTGGAGAGGGCACGCTCTCCCATGCAGAATGTCCTCAAGAAGGTGCACAAAGTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS CCA 90 bp | CGGCTGACCGTCTCATTGGTCGCCGGAGGCAGGCTCAAGGTTCCCTaGAGGATCATCAGCTTCTTTCTTAGGCTCGTGATCTCCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLTVSLVAGGRLKVP*RIISFFLRLVISWS Trigger: TGACCAGGAGATCACGAGCCTAAGAAAGAAGCTGATGATCCTCCAGGGAACCTTGAGCCTGCCTCCGGCGACCAATGAGACGGTCAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CAA 90 bp | CTCCTCCCATTTCCTGGCAAGTGGTTGGATTGTCTTCAGCACGAGGCACGCGGTGACTCCACGGTAGCATaGCGTTCTTCCAGGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLPFPGKWLDCLQHEARGDSTVA*RSSRVS Trigger: GGACACCCTGGAAGAACGCAATGCTACCGTGGAGTC...ACCGCGTGCCTCGTGCTGAAGACAATCCAACCACTTGCCAGGAAATGGGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS TCA 90 bp | CTCTTTCTTGAGGGACACGCAGTACACAGCCAGCTGCTCCACCGCTaGCTGTCCCACACCCATGTCTCGAATCATCTCCTCCACCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LFLEGHAVHSQLLHR*LSHTHVSNHLLHLR Trigger: TCTGAGGTGGAGGAGATGATTCGAGACATGGGTGTGGGACAGTCAGCGGTGGAGCAGCTGGCTGTGTACTGCGTGTCCCTCAAGAAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS TCA 90 bp | CCCCTGTGGCCTTCCGAGCTTCCTTCAGATTCTCATACTCTTTCTTaGGGGACACGCAGTACACAGCCAGCTGCTCCACCGCTGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLWPSELPSDSHTLS*GTRSTQPAAPPLTV Trigger: GACAGTCAGCGGTGGAGCAGCTGGCTGTGTACTGCGTGTCCCTCAAGAAAGAGTATGAGAATCTGAAGGAAGCTCGGAAGGCCACAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS GCA 90 bp | ATCTCCTCCACCTCAGACCGCTGGCTCTGGAGTAGGAGCTCAATTTaGTCCATGGTTTTCATCTTGCACTTGAGTCGGTGGGCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISSTSDRWLWSRSSI*SMVFILHLSRWASS Trigger: GGAGGAGGCCCACCGACTCAAGTGCAAGATGAAAACCATGGAGCAAATTGAGCTCCTACTCCAGAGCCAGCGGTCTGAGGTGGAGGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS CCA 90 bp | AGGAGCTCAATTTGCTCCATGGTTTTCATCTTGCACTTGAGTCGGTaGGCCTCCTCCCGAGCTTGTTTGGTCTCATCCTGCCGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSSICSMVFILHLSR*ASSRACLVSSCRCS Trigger: GGAGCAGCGGCAGGATGAGACCAAACAAGCTCGGGAGGAGGCCCACCGACTCAAGTGCAAGATGAAAACCATGGAGCAAATTGAGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS CCA 90 bp | TCCTCATCTAGCTCTCCTACACATCGCTGGCCACCCAGTGAGAGCTaGGACTCCGGCTTGGAGACTTTGTGCACCTTCTTGAGGACATTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSPTHRWPPSES*DSGLETLCTFLRTF Trigger: GAATGTCCTCAAGAAGGTGCACAAAGTCTCCAAGCCGGAGTCCCAGCTCTCACTGGGTGGCCAGCGATGTGTAGGAGAGCTAGATGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CAA 90 bp | TGTGCTTGCTGGAACTCACTGGGCTCACCCACCTGCTTTGTTTACAGTTTGGACTCCTCCCGAGCTTGTTaGGTCTCATCCTGCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CACWNSLGSPTCFVYSLDSSRAC*VSSCRC Trigger: GCAGCGGCAGGATGAGACCAAACAAGCTCGGGAGGA...GTCCAAACTGTAAACAAAGCAGGTGGGTGAGCCCAGTGAGTTCCAGCAAGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGAGGCAGGCAGGAGTTCAAGCGCAGGGTCCTCCAGCCTGCATAGGATCTTGAGAGTCTTCAACTaGCTCCTAGAGGACACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KLEAGRSSSAGSSSLHRILRVFN*LLEDTK Trigger: TTTGGTGTCCTCTAGGAGCAAGTTGAAGACTCTCAA...GATCCTATGCAGGCTGGAGGACCCTGCGCTTGAACTCCTGCCTGCCTCCAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS TCA 90 bp | TCTGGAGTAGGAGCTCAATTTGCTCCATGGTTTTCATCTTGCACTTaGGTCGGTGGGCCTCCTCCCGAGCTTGTTTGGTCTCATCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGVGAQFAPWFSSCT*VGGPPPELVWSHPA Trigger: GGCAGGATGAGACCAAACAAGCTCGGGAGGAGGCCCACCGACTCAAGTGCAAGATGAAAACCATGGAGCAAATTGAGCTCCTACTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS TCA 90 bp | GGCTCAAGGTTCCCTGGAGGATCATCAGCTTCTTTCTTAGGCTCGTaGTCTCCTGGTCAGCACTTTGTAAGTCCTTCTGGGCTGACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSRFPGGSSASFLGS*SPGQHFVSPSGLTS Trigger: TGAGGTCAGCCCAGAAGGACTTACAAAGTGCTGACCAGGAGATCACGAGCCTAAGAAAGAAGCTGATGATCCTCCAGGGAACCTTGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS TCA 90 bp | TCAAAGGTGGTATTGAGATCAATCTCATCACCGAAGGGTGGCTGGTaGAGCCTCGGGTTCATCATCTCCACAGGGGCTGGGCTCTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SKVVLRSISSPKGGW*SLGFIISTGAGLSK Trigger: TTTTGAGAGCCCAGCCCCTGTGGAGATGATGAACCCGAGGCTTCACCAGCCACCCTTCGGTGATGAGATTGATCTCAATACCACCTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS TCA 90 bp | AGCCAGAGGTCTGGGTTGGAGGGGTATTTACATCAAAGGTGGTATTaGGATCAATCTCATCACCGAAGGGTGGCTGGTGAAGCCTCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SQRSGLEGYLHQRWY*DQSHHRRVAGEASG Trigger: ACCCGAGGCTTCACCAGCCACCCTTCGGTGATGAGATTGATCTCAATACCACCTTTGATGTAAATACCCCTCCAACCCAGACCTCTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CCA 90 bp | TGTCCCACACCCATGTCTCGAATCATCTCCTCCACCTCAGACCGCTaGCTCTGGAGTAGGAGCTCAATTTGCTCCATGGTTTTCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CPTPMSRIISSTSDR*LWSRSSICSMVFIL Trigger: CAAGATGAAAACCATGGAGCAAATTGAGCTCCTACTCCAGAGCCAGCGGTCTGAGGTGGAGGAGATGATTCGAGACATGGGTGTGGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CCA 90 bp | TCCAGGCACAGCTTCTTGGGGAGGCAATGCTGGGAGCCAGAGGTCTaGGTTGGAGGGGTATTTACATCAAAGGTGGTATTGAGATCAATC | + |
|
Preference number: 5 (lower is better) Translates to: SRHSFLGRQCWEPEV*VGGVFTSKVVLRSI Trigger: GATTGATCTCAATACCACCTTTGATGTAAATACCCCTCCAACCCAGACCTCTGGCTCCCAGCATTGCCTCCCCAAGAAGCTGTGCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CCA 90 bp | ACACCCATGTCTCGAATCATCTCCTCCACCTCAGACCGCTGGCTCTaGAGTAGGAGCTCAATTTGCTCCATGGTTTTCATCTTGCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: TPMSRIISSTSDRWL*SRSSICSMVFILHL Trigger: CAAGTGCAAGATGAAAACCATGGAGCAAATTGAGCTCCTACTCCAGAGCCAGCGGTCTGAGGTGGAGGAGATGATTCGAGACATGGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CCA 90 bp | ATTTACATCAAAGGTGGTATTGAGATCAATCTCATCACCGAAGGGTaGCTGGTGAAGCCTCGGGTTCATCATCTCCACAGGGGCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IYIKGGIEINLITEG*LVKPRVHHLHRGWA Trigger: AGCCCAGCCCCTGTGGAGATGATGAACCCGAGGCTTCACCAGCCACCCTTCGGTGATGAGATTGATCTCAATACCACCTTTGATGTAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CCA 90 bp | GCACAGCTTCTTGGGGAGGCAATGCTGGGAGCCAGAGGTCTGGGTTaGAGGGGTATTTACATCAAAGGTGGTATTGAGATCAATCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: AQLLGEAMLGARGLG*RGIYIKGGIEINLI Trigger: GATGAGATTGATCTCAATACCACCTTTGATGTAAATACCCCTCCAACCCAGACCTCTGGCTCCCAGCATTGCCTCCCCAAGAAGCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS TCA 90 bp | GCACTTTGTAAGTCCTTCTGGGCTGACCTCAGTTCTAACTTGGCCTaGTCCAGCTCAGTGTTGAGAGTCTTCAACTTGCTCCTAGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ALCKSFWADLSSNLA*SSSVLRVFNLLLED Trigger: GTCCTCTAGGAGCAAGTTGAAGACTCTCAACACTGAGCTGGATCAGGCCAAGTTAGAACTGAGGTCAGCCCAGAAGGACTTACAAAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR CAA 90 bp | ATAGTGCATGTGTTCTTGTGCTCAGCTCTTTGTTTGCTCTTTAAACAGCCCAGGAAGAAGGTATCCAGCTaGGGCTGGGAGGCAGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: IVHVFLCSALCLLFKQPRKKVSS*GWEAEL Trigger: GAGTTCTGCCTCCCAGCCCAAGCTGGATACCTTCTT...CCTGGGCTGTTTAAAGAGCAAACAAAGAGCTGAGCACAAGAACACATGCACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS-3UTR CAA 90 bp | TTTCTAAGGTTTTGGTACAAATTTATACAGCCAGAGCCTAGAAGAAAAGATGCCACATCAAAGGTGGTATaGAGATCAATCTCATCACCG | + |
|
Preference number: 5 (lower is better) Translates to: FLRFWYKFIQPEPRRKDATSKVV*RSISSP Trigger: CGGTGATGAGATTGATCTCAATACCACCTTTGATGT...GGCATCTTTTCTTCTAGGCTCTGGCTGTATAAATTTGTACCAAAACCTTAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS TCA 72 bp | TCTCCACAGGGGCTGGGCTCTCAAAAACCAGGCGGCTaGCCGTCTCATTGGTCGCCGGAGGCAGGCTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SPQGLGSQKPGG*PSHWSPEAGSR Trigger: CCTTGAGCCTGCCTCCGGCGACCAATGAGACGGTCAGCCGCCTGGTTTTTGAGAGCCCAGCCCCTGTGGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CAA 72 bp | GCTGGGCTCTCAAAAACCAGGCGGCTGACCGTCTCATaGGTCGCCGGAGGCAGGCTCAAGGTTCCCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AGLSKTRRLTVS*VAGGRLKVPWR Trigger: CCTCCAGGGAACCTTGAGCCTGCCTCCGGCGACCAATGAGACGGTCAGCCGCCTGGTTTTTGAGAGCCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CAA 90 bp | TCCACAGGGGCTGGGCTCTCAAAAACCAGGCGGCTGACCGTCTCATaGGTCGCCGGAGGCAGGCTCAAGGTTCCCTGGAGGATCATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: STGAGLSKTRRLTVS*VAGGRLKVPWRIIS Trigger: GCTGATGATCCTCCAGGGAACCTTGAGCCTGCCTCCGGCGACCAATGAGACGGTCAGCCGCCTGGTTTTTGAGAGCCCAGCCCCTGTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CCA 72 bp | CCAGCCAGTTCCTCATCTAGCTCTCCTACACATCGCTaGCCACCCAGTGAGAGCTGGGACTCCGGCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PASSSSSSPTHR*PPSESWDSGLE Trigger: CTCCAAGCCGGAGTCCCAGCTCTCACTGGGTGGCCAGCGATGTGTAGGAGAGCTAGATGAGGAACTGGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CAA 90 bp | CCCAGTGAGAGCTGGGACTCCGGCTTGGAGACTTTGTGCACCTTCTaGAGGACATTCTGCATGGGAGAGCGTGCCCTCTCCAGGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: PSESWDSGLETLCTF*RTFCMGERALSRHS Trigger: GCTGTGCCTGGAGAGGGCACGCTCTCCCATGCAGAATGTCCTCAAGAAGGTGCACAAAGTCTCCAAGCCGGAGTCCCAGCTCTCACTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CAA 90 bp | CATCGCTGGCCACCCAGTGAGAGCTGGGACTCCGGCTTGGAGACTTaGTGCACCTTCTTGAGGACATTCTGCATGGGAGAGCGTGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HRWPPSESWDSGLET*CTFLRTFCMGERAL Trigger: GAGGGCACGCTCTCCCATGCAGAATGTCCTCAAGAAGGTGCACAAAGTCTCCAAGCCGGAGTCCCAGCTCTCACTGGGTGGCCAGCGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS TCA 72 bp | GTGTGGCCACAGTGGATGGCAGCCACGTCACGGGAGTaGTCGAAGAAGTCGGAGCAGATAGTGCACAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: VWPQWMAATSRE*SKKSEQIVHRA Trigger: CGCTCTGTGCACTATCTGCTCCGACTTCTTCGATCACTCCCGTGACGTGGCTGCCATCCACTGTGGCCACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049348.9 ENSMUST00000194271.2 |
||
| CDS TCA 72 bp | GAGGGACACGCAGTACACAGCCAGCTGCTCCACCGCTaGCTGTCCCACACCCATGTCTCGAATCATCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: EGHAVHSQLLHR*LSHTHVSNHLL Trigger: GAGGAGATGATTCGAGACATGGGTGTGGGACAGTCAGCGGTGGAGCAGCTGGCTGTGTACTGCGTGTCCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS TCA 72 bp | GCTGGGACTCCGGCTTGGAGACTTTGTGCACCTTCTTaGGGACATTCTGCATGGGAGAGCGTGCCCTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGTPAWRLCAPS*GHSAWESVPSP Trigger: TGGAGAGGGCACGCTCTCCCATGCAGAATGTCCTCAAGAAGGTGCACAAAGTCTCCAAGCCGGAGTCCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS GCA 72 bp | GTGCACCTTCTTGAGGACATTCTGCATGGGAGAGCGTaGCCTCTCCAGGCACAGCTTCTTGGGGAGGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: VHLLEDILHGRA*PLQAQLLGEAM Trigger: CATTGCCTCCCCAAGAAGCTGTGCCTGGAGAGGGCACGCTCTCCCATGCAGAATGTCCTCAAGAAGGTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS CCA 72 bp | CTGGTGAAGCCTCGGGTTCATCATCTCCACAGGGGCTaGGCTCTCAAAAACCAGGCGGCTGACCGTCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: LVKPRVHHLHRG*ALKNQAADRLI Trigger: AATGAGACGGTCAGCCGCCTGGTTTTTGAGAGCCCAGCCCCTGTGGAGATGATGAACCCGAGGCTTCACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CCA 72 bp | AGCTCTCCTACACATCGCTGGCCACCCAGTGAGAGCTaGGACTCCGGCTTGGAGACTTTGTGCACCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSPTHRWPPSES*DSGLETLCTFL Trigger: CAAGAAGGTGCACAAAGTCTCCAAGCCGGAGTCCCAGCTCTCACTGGGTGGCCAGCGATGTGTAGGAGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CAA 72 bp | CATCTTGCACTTGAGTCGGTGGGCCTCCTCCCGAGCTaGTTTGGTCTCATCCTGCCGCTGCTCCAGGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: HLALESVGLLPS*FGLILPLLQEL Trigger: AAGTTCCTGGAGCAGCGGCAGGATGAGACCAAACAAGCTCGGGAGGAGGCCCACCGACTCAAGTGCAAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CAA 72 bp | AGCTGGGACTCCGGCTTGGAGACTTTGTGCACCTTCTaGAGGACATTCTGCATGGGAGAGCGTGCCCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SWDSGLETLCTF*RTFCMGERALS Trigger: GGAGAGGGCACGCTCTCCCATGCAGAATGTCCTCAAGAAGGTGCACAAAGTCTCCAAGCCGGAGTCCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS GCA 72 bp | GGCTTGGAGACTTTGTGCACCTTCTTGAGGACATTCTaGATGGGAGAGCGTGCCCTCTCCAGGCACAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GLETLCTFLRTF*MGERALSRHSF Trigger: GAAGCTGTGCCTGGAGAGGGCACGCTCTCCCATGCAGAATGTCCTCAAGAAGGTGCACAAAGTCTCCAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CAA 72 bp | CCACCCAGTGAGAGCTGGGACTCCGGCTTGGAGACTTaGTGCACCTTCTTGAGGACATTCTGCATGGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PPSESWDSGLET*CTFLRTFCMGE Trigger: CTCTCCCATGCAGAATGTCCTCAAGAAGGTGCACAAAGTCTCCAAGCCGGAGTCCCAGCTCTCACTGGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CAA 90 bp | TCCCCTGTGGCCTTCCGAGCTTCCTTCAGATTCTCATACTCTTTCTaGAGGGACACGCAGTACACAGCCAGCTGCTCCACCGCTGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: SPVAFRASFRFSYSF*RDTQYTASCSTADC Trigger: ACAGTCAGCGGTGGAGCAGCTGGCTGTGTACTGCGTGTCCCTCAAGAAAGAGTATGAGAATCTGAAGGAAGCTCGGAAGGCCACAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS TCA 72 bp | GTATTGAGATCAATCTCATCACCGAAGGGTGGCTGGTaGAGCCTCGGGTTCATCATCTCCACAGGGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VLRSISSPKGGW*SLGFIISTGAG Trigger: CCCAGCCCCTGTGGAGATGATGAACCCGAGGCTTCACCAGCCACCCTTCGGTGATGAGATTGATCTCAATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CCA 72 bp | TCTTCCAGGGTGTCCCGTAGAGTGTCGATAATGGCCTaGCTGTCCCGTTTCTCCCTGTCTTTCTGGGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRVSRRVSIMA*LSRFSLSFWES Trigger: GCTTTCCCAGAAAGACAGGGAGAAACGGGACAGCCAGGCCATTATCGACACTCTACGGGACACCCTGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049348.9 ENSMUST00000194271.2 |
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| CDS CCA 72 bp | GTCTCATTGGTCGCCGGAGGCAGGCTCAAGGTTCCCTaGAGGATCATCAGCTTCTTTCTTAGGCTCGTGATC | + |
|
Preference number: 6 (lower is better) Translates to: VSLVAGGRLKVP*RIISFFLRLVI Trigger: GATCACGAGCCTAAGAAAGAAGCTGATGATCCTCCAGGGAACCTTGAGCCTGCCTCCGGCGACCAATGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CCA 72 bp | TTAGGCATTGCAGATGAAAAGTGTGGCCACAGTGGATaGCAGCCACGTCACGGGAGTGATCGAAGAAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LGIADEKCGHSG*QPRHGSDRRSR Trigger: CCGACTTCTTCGATCACTCCCGTGACGTGGCTGCCATCCACTGTGGCCACACTTTTCATCTGCAATGCCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049348.9 ENSMUST00000194271.2 |
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| CDS CCA 72 bp | CCCATGTCTCGAATCATCTCCTCCACCTCAGACCGCTaGCTCTGGAGTAGGAGCTCAATTTGCTCCATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: PMSRIISSTSDR*LWSRSSICSMV Trigger: AACCATGGAGCAAATTGAGCTCCTACTCCAGAGCCAGCGGTCTGAGGTGGAGGAGATGATTCGAGACATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CAA 90 bp | ATCTCTGCCTTGTTTAAGGCGTTCTGTAGGGACTCCACGGTAGCATaGCGTTCTTCCAGGGTGTCCCGTAGAGTGTCGATAATGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ISALFKAFCRDSTVA*RSSRVSRRVSIMAW Trigger: CCAGGCCATTATCGACACTCTACGGGACACCCTGGAAGAACGCAATGCTACCGTGGAGTCCCTACAGAACGCCTTAAACAAGGCAGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049348.9 ENSMUST00000194271.2 |
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| CDS CAA 90 bp | CATGGTTTTCATCTTGCACTTGAGTCGGTGGGCCTCCTCCCGAGCTaGTTTGGTCTCATCCTGCCGCTGCTCCAGGAACTTCATCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: HGFHLALESVGLLPS*FGLILPLLQELHLF Trigger: AAACAGATGAAGTTCCTGGAGCAGCGGCAGGATGAGACCAAACAAGCTCGGGAGGAGGCCCACCGACTCAAGTGCAAGATGAAAACCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CAA 90 bp | CTCTGGAGTAGGAGCTCAATTTGCTCCATGGTTTTCATCTTGCACTaGAGTCGGTGGGCCTCCTCCCGAGCTTGTTTGGTCTCATCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LWSRSSICSMVFILH*SRWASSRACLVSSC Trigger: GCAGGATGAGACCAAACAAGCTCGGGAGGAGGCCCACCGACTCAAGTGCAAGATGAAAACCATGGAGCAAATTGAGCTCCTACTCCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS GCA 72 bp | ACCTCAGACCGCTGGCTCTGGAGTAGGAGCTCAATTTaGTCCATGGTTTTCATCTTGCACTTGAGTCGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TSDRWLWSRSSI*SMVFILHLSRW Trigger: CCACCGACTCAAGTGCAAGATGAAAACCATGGAGCAAATTGAGCTCCTACTCCAGAGCCAGCGGTCTGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CCA 72 bp | ATTTGCTCCATGGTTTTCATCTTGCACTTGAGTCGGTaGGCCTCCTCCCGAGCTTGTTTGGTCTCATCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ICSMVFILHLSR*ASSRACLVSSC Trigger: GCAGGATGAGACCAAACAAGCTCGGGAGGAGGCCCACCGACTCAAGTGCAAGATGAAAACCATGGAGCAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CAA 72 bp | TGCCAACCTGGATTCTACACTGTGGGCAGGTCCGACTaGGTGCTGTCTCAAACCACTGGATTAGGCATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CQPGFYTVGRSD*VLSQTTGLGIA Trigger: TGCAATGCCTAATCCAGTGGTTTGAGACAGCACCAAGTCGGACCTGCCCACAGTGTAGAATCCAGGTTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CAA 72 bp | AGGAGCTCAATTTGCTCCATGGTTTTCATCTTGCACTaGAGTCGGTGGGCCTCCTCCCGAGCTTGTTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RSSICSMVFILH*SRWASSRACLV Trigger: GACCAAACAAGCTCGGGAGGAGGCCCACCGACTCAAGTGCAAGATGAAAACCATGGAGCAAATTGAGCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CAA 72 bp | TGGAGTAGGAGCTCAATTTGCTCCATGGTTTTCATCTaGCACTTGAGTCGGTGGGCCTCCTCCCGAGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: WSRSSICSMVFI*HLSRWASSRAC Trigger: ACAAGCTCGGGAGGAGGCCCACCGACTCAAGTGCAAGATGAAAACCATGGAGCAAATTGAGCTCCTACTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CAA 72 bp | CCTCTTCCTGGATTCTACACTGTGGGCAGGTCCGACTaGGTGCTGTCTCAAACCACTGGATTAGGCATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PLPGFYTVGRSD*VLSQTTGLGIA Trigger: TGCAATGCCTAATCCAGTGGTTTGAGACAGCACCAAGTCGGACCTGCCCACAGTGTAGAATCCAGGAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194271.2 |
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| CDS CCA 72 bp | TCTCGAATCATCTCCTCCACCTCAGACCGCTGGCTCTaGAGTAGGAGCTCAATTTGCTCCATGGTTTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: SRIISSTSDRWL*SRSSICSMVFI Trigger: GATGAAAACCATGGAGCAAATTGAGCTCCTACTCCAGAGCCAGCGGTCTGAGGTGGAGGAGATGATTCGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CCA 72 bp | AAAGGTGGTATTGAGATCAATCTCATCACCGAAGGGTaGCTGGTGAAGCCTCGGGTTCATCATCTCCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: KGGIEINLITEG*LVKPRVHHLHR Trigger: CCTGTGGAGATGATGAACCCGAGGCTTCACCAGCCACCCTTCGGTGATGAGATTGATCTCAATACCACCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CCA 72 bp | ATCCAAGACATTCTCCTCTTCCTGGATTCTACACTGTaGGCAGGTCCGACTTGGTGCTGTCTCAAACCACTG | + |
|
Preference number: 6 (lower is better) Translates to: IQDILLFLDSTL*AGPTWCCLKPL Trigger: CAGTGGTTTGAGACAGCACCAAGTCGGACCTGCCCACAGTGTAGAATCCAGGAAGAGGAGAATGTCTTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194271.2 |
||
| CDS CAA 72 bp | TTGTTTAAGGCGTTCTGTAGGGACTCCACGGTAGCATaGCGTTCTTCCAGGGTGTCCCGTAGAGTGTCGATA | + |
|
Preference number: 6 (lower is better) Translates to: LFKAFCRDSTVA*RSSRVSRRVSI Trigger: TATCGACACTCTACGGGACACCCTGGAAGAACGCAATGCTACCGTGGAGTCCCTACAGAACGCCTTAAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049348.9 ENSMUST00000194271.2 |
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| CDS TCA 72 bp | AAGTCCTTCTGGGCTGACCTCAGTTCTAACTTGGCCTaGTCCAGCTCAGTGTTGAGAGTCTTCAACTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: KSFWADLSSNLA*SSSVLRVFNLL Trigger: GAGCAAGTTGAAGACTCTCAACACTGAGCTGGATCAGGCCAAGTTAGAACTGAGGTCAGCCCAGAAGGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS TCA 72 bp | TTCCCTGGAGGATCATCAGCTTCTTTCTTAGGCTCGTaGTCTCCTGGTCAGCACTTTGTAAGTCCTTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FPGGSSASFLGS*SPGQHFVSPSG Trigger: CCCAGAAGGACTTACAAAGTGCTGACCAGGAGATCACGAGCCTAAGAAAGAAGCTGATGATCCTCCAGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CCA 72 bp | ACAGGCACTGGTCGGATAATGGTTGTGTCCCTAGGCTaGATGAATTTTGTTCGTCCTCCAAGCCCATCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TGTGRIMVVSLG*MNFVRPPSPSK Trigger: CTTTGATGGGCTTGGAGGACGAACAAAATTCATCCAGCCTAGGGACACAACCATTATCCGACCAGTGCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
||
| CDS CAA 90 bp | AGACATTCTCCTCTTCCTGGATTCTACACTGTGGGCAGGTCCGACTaGGTGCTGTCTCAAACCACTGGATTAGGCATTGCAGATGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RHSPLPGFYTVGRSD*VLSQTTGLGIADEK Trigger: CTTTTCATCTGCAATGCCTAATCCAGTGGTTTGAGACAGCACCAAGTCGGACCTGCCCACAGTGTAGAATCCAGGAAGAGGAGAATGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194271.2 |
||
| CDS CAA 90 bp | GCAGAACTCACAGTCTTTATTCTCACTTTCTGTTTACTCTTGGCCTaGGACTTAACAGGCACTGGTCGGATAATGGTTGTGTCCCTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: AELTVFILTFCLLLA*DLTGTGRIMVVSLG Trigger: GCCTAGGGACACAACCATTATCCGACCAGTGCCTGTTAAGTCCAAGGCCAAGAGTAAACAGAAAGTGAGAATAAAGACTGTGAGTTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS TCA 72 bp | TCTGGGTTGGAGGGGTATTTACATCAAAGGTGGTATTaGGATCAATCTCATCACCGAAGGGTGGCTGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: SGLEGYLHQRWY*DQSHHRRVAGE Trigger: TTCACCAGCCACCCTTCGGTGATGAGATTGATCTCAATACCACCTTTGATGTAAATACCCCTCCAACCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CCA 72 bp | TATAATAGTCTTTTTGCCAACCTGGATTCTACACTGTaGGCAGGTCCGACTTGGTGCTGTCTCAAACCACTG | + |
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Preference number: 6 (lower is better) Translates to: YNSLFANLDSTL*AGPTWCCLKPL Trigger: CAGTGGTTTGAGACAGCACCAAGTCGGACCTGCCCACAGTGTAGAATCCAGGTTGGCAAAAAGACTATTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CAA 72 bp | ACAGTCTTTATTCTCACTTTCTGTTTACTCTTGGCCTaGGACTTAACAGGCACTGGTCGGATAATGGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: TVFILTFCLLLA*DLTGTGRIMVV Trigger: CACAACCATTATCCGACCAGTGCCTGTTAAGTCCAAGGCCAAGAGTAAACAGAAAGTGAGAATAAAGACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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| CDS CCA 72 bp | TTTAAGAATTCTGCATCCAAGACATTCTCCTCTTCCTaGGCGAGGTCAAAGAAAAGTTTGTTTATAATAGTC | + |
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Preference number: 6 (lower is better) Translates to: FKNSASKTFSSS*ARSKKSLFIIV Trigger: GACTATTATAAACAAACTTTTCTTTGACCTCGCCCAGGAAGAGGAGAATGTCTTGGATGCAGAATTCTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049348.9 |
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