Pregenerated sensors for TRAFD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042726Ensembl transcript IDs: ENSMUST00000042312.14, ENSMUST00000120784.8, ENSMUST00000152265.8, ENSMUST00000155379.8, ENSMUST00000156158.6, ENSMUST00000202064.2
Found 272 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTGGGGACCACTTAGCCTCAGCAGAGTCCCCCAAGAGACCCTCGTaGGTGGGAACGGGAGGCACAGGCAAGCCTCCCAGGGAGCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: CGDHLASAESPKRPS*VGTGGTGKPPREQE Trigger: TTCCTGCTCCCTGGGAGGCTTGCCTGTGCCTCCCGTTCCCACGCACGAGGGTCTCTTGGGGGACTCTGCTGAGGCTAAGTGGTCCCCACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR GCA 90 bp | CTCCGCATCGCCTGCTCCCTGCTGCTTTGGAGGCTTGGCCTTTGCTaGTCTGCTGTGGTAGCCAGCAGCTGCAGGGCTGACCCGAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: LRIACSLLLWRLGLC*SAVVASSCRADPRA Trigger: AGCTCTCGGGTCAGCCCTGCAGCTGCTGGCTACCACAGCAGAGCAGCAAAGGCCAAGCCTCCAAAGCAGCAGGGAGCAGGCGATGCGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR TCA 90 bp | GGCTGCCCCGCATCTGCCCACGGATGTCCTGGCTATCAGAGTTGTTaGGTTTCAGCACACCGGGAGGGCTACGCTGGCAGTCAGACCTGG | + |
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Preference number: 1 (lower is better) Translates to: GCPASAHGCPGYQSC*VSAHREGYAGSQTW Trigger: CCAGGTCTGACTGCCAGCGTAGCCCTCCCGGTGTGCTGAAACTCAACAACTCTGATAGCCAGGACATCCGTGGGCAGATGCGGGGCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR GCA 90 bp | GAGCCCCCAGAGTCACCATCACTCCTCTTCCTCCTCCGCATCGCCTaGTCCCTGCTGCTTTGGAGGCTTGGCCTTTGCTGCTCTGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: EPPESPSLLFLLRIA*SLLLWRLGLCCSAV Trigger: CACAGCAGAGCAGCAAAGGCCAAGCCTCCAAAGCAGCAGGGAGCAGGCGATGCGGAGGAGGAAGAGGAGTGATGGTGACTCTGGGGGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR CCA 90 bp | CGCCTCCTGGACAGCTCTGCTGAAGTGTTTTCTGGCTGCGAATCCTaGGCTGGGATGCCCTCCACTGCACGGTGGTTTGCTGTGGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: RLLDSSAEVFSGCES*AGMPSTARWFAVAG Trigger: CCCAGCCACAGCAAACCACCGTGCAGTGGAGGGCATCCCAGCCCAGGATTCGCAGCCAGAAAACACTTCAGCAGAGCTGTCCAGGAGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR CCA 90 bp | GCTATGGGCCCATTCTGGCTGCCCCGCATCTGCCCACGGATGTCCTaGCTATCAGAGTTGTTGAGTTTCAGCACACCGGGAGGGCTACGC | + |
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Preference number: 1 (lower is better) Translates to: AMGPFWLPRICPRMS*LSELLSFSTPGGLR Trigger: GCGTAGCCCTCCCGGTGTGCTGAAACTCAACAACTCTGATAGCCAGGACATCCGTGGGCAGATGCGGGGCAGCCAGAATGGGCCCATAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR TCA 90 bp | CCAGTGGATACCCTGGTGTTTGACCCGCCTCCTGGACAGCTCTGCTaGAGTGTTTTCTGGCTGCGAATCCTGGGCTGGGATGCCCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: PVDTLVFDPPPGQLC*SVFWLRILGWDALH Trigger: GTGGAGGGCATCCCAGCCCAGGATTCGCAGCCAGAAAACACTTCAGCAGAGCTGTCCAGGAGGCGGGTCAAACACCAGGGTATCCACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR GCA 90 bp | GGAGCGTGCCCGGATGCTATGGGCCCATTCTGGCTGCCCCGCATCTaGCCACGGATGTCCTGGCTATCAGAGTTGTTGAGTTTCAGCACA | + |
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Preference number: 1 (lower is better) Translates to: GACPDAMGPFWLPRI*PRMSWLSELLSFST Trigger: TGTGCTGAAACTCAACAACTCTGATAGCCAGGACATCCGTGGGCAGATGCGGGGCAGCCAGAATGGGCCCATAGCATCCGGGCACGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR CCA 90 bp | ATAGAGTGGATCACTGGAGCGTGCCCGGATGCTATGGGCCCATTCTaGCTGCCCCGCATCTGCCCACGGATGTCCTGGCTATCAGAGTTG | + |
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Preference number: 1 (lower is better) Translates to: IEWITGACPDAMGPF*LPRICPRMSWLSEL Trigger: CAACTCTGATAGCCAGGACATCCGTGGGCAGATGCGGGGCAGCCAGAATGGGCCCATAGCATCCGGGCACGCTCCAGTGATCCACTCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR GCA 90 bp | GCCTCCAGTCCGTGTCCCTGCCAGACATGTGCCTGTGTAACACGCTaGACACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTC | + |
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Preference number: 1 (lower is better) Translates to: ASSPCPCQTCACVTR*TLKLRSPPGGCFSL Trigger: GAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTGTGCAGCGTGTTACACAGGCACATGTCTGGCAGGGACACGGACTGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
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| 3UTR GCA 90 bp | ACTCCCTCAGAACCAGACACAGTGCTGTGTGCCCATGATCCCAGTTaGCTGGGACGCTCAGTACCACAGCCACAAGGTGAGGTACTTGTG | + |
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Preference number: 1 (lower is better) Translates to: TPSEPDTVLCAHDPS*LGRSVPQPQGEVLV Trigger: CACAAGTACCTCACCTTGTGGCTGTGGTACTGAGCGTCCCAGGCAACTGGGATCATGGGCACACAGCACTGTGTCTGGTTCTGAGGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR GCA 90 bp | TGGATAGAGATTTTGAATAGAGTGGATCACTGGAGCGTGCCCGGATaGTATGGGCCCATTCTGGCTGCCCCGCATCTGCCCACGGATGTC | + |
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Preference number: 1 (lower is better) Translates to: WIEILNRVDHWSVPG*YGPILAAPHLPTDV Trigger: GACATCCGTGGGCAGATGCGGGGCAGCCAGAATGGGCCCATAGCATCCGGGCACGCTCCAGTGATCCACTCTATTCAAAATCTCTATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR CCA 90 bp | CCTCAGAACCAGACACAGTGCTGTGTGCCCATGATCCCAGTTGCCTaGGACGCTCAGTACCACAGCCACAAGGTGAGGTACTTGTGTCAC | + |
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Preference number: 1 (lower is better) Translates to: PQNQTQCCVPMIPVA*DAQYHSHKVRYLCH Trigger: GTGACACAAGTACCTCACCTTGTGGCTGTGGTACTGAGCGTCCCAGGCAACTGGGATCATGGGCACACAGCACTGTGTCTGGTTCTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR GCA 90 bp | TACATCAGTAAACACTTTCGCCAAGAAACTACTGCCCCTGAGTGCTaGGGTGCTGGAAAGGCCAGAGTTCAGCTCCACTCTACTGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: YISKHFRQETTAPEC*GAGKARVQLHSTAP Trigger: GGGAGCAGTAGAGTGGAGCTGAACTCTGGCCTTTCCAGCACCGCAGCACTCAGGGGCAGTAGTTTCTTGGCGAAAGTGTTTACTGATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR GCA 90 bp | AATTACATCAGTAAACACTTTCGCCAAGAAACTACTGCCCCTGAGTaGTGCGGTGCTGGAAAGGCCAGAGTTCAGCTCCACTCTACTGCT | + |
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Preference number: 1 (lower is better) Translates to: NYISKHFRQETTAPE*CGAGKARVQLHSTA Trigger: AGCAGTAGAGTGGAGCTGAACTCTGGCCTTTCCAGCACCGCAGCACTCAGGGGCAGTAGTTTCTTGGCGAAAGTGTTTACTGATGTAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR TCA 90 bp | TTTAGATATGCTCACCACTTAGACCAGTCAACTGGAAAGGGTTCATaGCTCCCTCAGAACCAGACACAGTGCTGTGTGCCCATGATCCCA | + |
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Preference number: 1 (lower is better) Translates to: FRYAHHLDQSTGKGS*LPQNQTQCCVPMIP Trigger: TGGGATCATGGGCACACAGCACTGTGTCTGGTTCTGAGGGAGTCATGAACCCTTTCCAGTTGACTGGTCTAAGTGGTGAGCATATCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR TCA 90 bp | ACACCCCTGATGGAAGAGCTGCCCGTATTGAGTGAACGTAAGGCATaGGAAGGGTTGCAGCTTGTCTGTCATCCAAAAGACATGTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: TPLMEELPVLSERKA*EGLQLVCHPKDMLK Trigger: TTTTAACATGTCTTTTGGATGACAGACAAGCTGCAACCCTTCTCATGCCTTACGTTCACTCAATACGGGCAGCTCTTCCATCAGGGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR TCA 90 bp | AAGGCCAGCCTCCTAACTGCTCAGCAAACAGATGTCAGCAAACGATaGAAAGCCGTTTGCACTTGGCTTTGTGGTGTGAAGTTTCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: KASLLTAQQTDVSKR*KAVCTWLCGVKFQK Trigger: TTTCTGAAACTTCACACCACAAAGCCAAGTGCAAACGGCTTTTCATCGTTTGCTGACATCTGTTTGCTGAGCAGTTAGGAGGCTGGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR-3UTR GCA 90 bp | GGCCCATTCTGGCTGCCCCGCATCTGCCCACGGATGTCCTGGCTATCAGAGTTGACTGCCCCTGAGTGCTaGGGTGCTGGAAAGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: GPFWLPRICPRMSWLSELTAPEC*GAGKAR Trigger: TCTGGCCTTTCCAGCACCGCAGCACTCAGGGGCAGT...CAACTCTGATAGCCAGGACATCCGTGGGCAGATGCGGGGCAGCCAGAATGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR CAA 90 bp | TGGCTGCCCCGCATCTGCCCACGGATGTCCTGGCTATCAGAGTTGTaGAGTTTCAGCACACCGGGAGGGCTACGCTGGCAGTCAGACCTG | + |
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Preference number: 2 (lower is better) Translates to: WLPRICPRMSWLSEL*SFSTPGGLRWQSDL Trigger: CAGGTCTGACTGCCAGCGTAGCCCTCCCGGTGTGCTGAAACTCAACAACTCTGATAGCCAGGACATCCGTGGGCAGATGCGGGGCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR-3UTR GCA 90 bp | CCCGGATGCTATGGGCCCATTCTGGCTGCCCCGCATCTGCCCACGGATGTCCTGCAGAACCAGACACAGTaGTGTGTGCCCATGATCCCA | + |
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Preference number: 2 (lower is better) Translates to: PGCYGPILAAPHLPTDVLQNQTQ*CVPMIP Trigger: TGGGATCATGGGCACACAGCACTGTGTCTGGTTCTG...CAGGACATCCGTGGGCAGATGCGGGGCAGCCAGAATGGGCCCATAGCATCCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR-3UTR CCA 90 bp | TGCTATGGGCCCATTCTGGCTGCCCCGCATCTGCCCACGGATGTCCTGGCTATCCACGGTGGTTTGCTGTaGCTGGGCGTTGGTCACACT | + |
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Preference number: 2 (lower is better) Translates to: CYGPILAAPHLPTDVLAIHGGLL*LGVGHT Trigger: AGTGTGACCAACGCCCAGCCACAGCAAACCACCGTG...GATAGCCAGGACATCCGTGGGCAGATGCGGGGCAGCCAGAATGGGCCCATAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR CAA 90 bp | CTGCAGCCTCACTCCCTAGCTCAGCCCCAGTGGATACCCTGGTGTTaGACCCGCCTCCTGGACAGCTCTGCTGAAGTGTTTTCTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LQPHSLAQPQWIPWC*TRLLDSSAEVFSGC Trigger: GCAGCCAGAAAACACTTCAGCAGAGCTGTCCAGGAGGCGGGTCAAACACCAGGGTATCCACTGGGGCTGAGCTAGGGAGTGAGGCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR CAA 90 bp | TTCTGGCTGCCCCGCATCTGCCCACGGATGTCCTGGCTATCAGAGTaGTTGAGTTTCAGCACACCGGGAGGGCTACGCTGGCAGTCAGAC | + |
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Preference number: 2 (lower is better) Translates to: FWLPRICPRMSWLSE*LSFSTPGGLRWQSD Trigger: GTCTGACTGCCAGCGTAGCCCTCCCGGTGTGCTGAAACTCAACAACTCTGATAGCCAGGACATCCGTGGGCAGATGCGGGGCAGCCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR-3UTR TCA 90 bp | TGGGATGCCCTCCACTGCACGGTGGTTTGCTGTGGCTGGGCGTTGGTCACACTGGGATGCTTCTCACTCTaGGATCCCAGAACCCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: WDALHCTVVCCGWALVTLGCFSL*DPRTLV Trigger: GACAAGGGTTCTGGGATCTCAGAGTGAGAAGCATCC...CAGTGTGACCAACGCCCAGCCACAGCAAACCACCGTGCAGTGGAGGGCATCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR-3UTR GCA 90 bp | ATCAAGAACAGAGAGAGGTGGGTGAGTGACCCGCAAGGACGAAGGTGGCCTCCATCCCTGCCAGACATGTaGCTGTGTAACACGCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: IKNRERWVSDPQGRRWPPSLPDM*LCNTLH Trigger: GTGCAGCGTGTTACACAGGCACATGTCTGGCAGGGA...TGGAGGCCACCTTCGTCCTTGCGGGTCACTCACCCACCTCTCTCTGTTCTTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAAGAACAGAGAGAGGTGGGTGAGTGACCCGCAAGGACGAAGGTGGCCTCCAAGCCCGAGAGGCAGCTaGACATTGCACCAGCATGTT | + |
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Preference number: 2 (lower is better) Translates to: IKNRERWVSDPQGRRWPPSPRGS*TLHQHV Trigger: AACATGCTGGTGCAATGTCCAGCTGCCTCTCGGGCT...TGGAGGCCACCTTCGTCCTTGCGGGTCACTCACCCACCTCTCTCTGTTCTTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
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| 3UTR CAA 90 bp | GGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAACCCTaGTCTCTGTCCATCAGGACCACAAAGCACCAAGAAGCAGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: GPHQEDASHSEIPEP*SLSIRTTKHQEAVV Trigger: CACCACTGCTTCTTGGTGCTTTGTGGTCCTGATGGACAGAGACAAGGGTTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTCCTGGCTATCAGAGTTGTTGAGTTTCAGCACACCGGGAGGGCTACGCTGGGATCTTCCACACCCCTaGTGGAAGAGCTGCCCGTAT | + |
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Preference number: 2 (lower is better) Translates to: MSWLSELLSFSTPGGLRWDLPHP*WKSCPY Trigger: ATACGGGCAGCTCTTCCATCAGGGGTGTGGAAGATC...CCAGCGTAGCCCTCCCGGTGTGCTGAAACTCAACAACTCTGATAGCCAGGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR-3UTR GCA 90 bp | GCTGAAGTGTTTTCTGGCTGCGAATCCTGGGCTGGGATGCCCTCCACTGCACGGAGGCATGAGAAGGGTTaGAGCTTGTCTGTCATCCAA | + |
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Preference number: 2 (lower is better) Translates to: AEVFSGCESWAGMPSTARRHEKG*SLSVIQ Trigger: TTGGATGACAGACAAGCTGCAACCCTTCTCATGCCT...CCGTGCAGTGGAGGGCATCCCAGCCCAGGATTCGCAGCCAGAAAACACTTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR-3UTR GCA 90 bp | GATCCCAGAACCCTTGTCTCTGTCCATCAGGACCACAAAGCACCAAGAAGCAGTATCTGGTGTCTCTCCTaGCCAGTAAGCCCGAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: DPRTLVSVHQDHKAPRSSIWCLS*PVSPRG Trigger: GCCTCTCGGGCTTACTGGGCAGGAGAGACACCAGAT...ACTGCTTCTTGGTGCTTTGTGGTCCTGATGGACAGAGACAAGGGTTCTGGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGCAGGAAGCCACATTGTTCATGGTCCTGTTAGGAGACATCGAGTAGGTGGGATCTGGTGTCTCTCCTaGCCAGTAAGCCCGAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: VAGSHIVHGPVRRHRVGGIWCLS*PVSPRG Trigger: GCCTCTCGGGCTTACTGGGCAGGAGAGACACCAGAT...CCCACCTACTCGATGTCTCCTAACAGGACCATGAACAATGTGGCTTCCTGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR-3UTR GCA 90 bp | GGCCCTGGTAGGGGCAGCATGAACAAAGCAGTACATTCCTCATCAAGAACAGAGATCTGGTGTCTCTCCTaGCCAGTAAGCCCGAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: GPGRGSMNKAVHSSSRTEIWCLS*PVSPRG Trigger: GCCTCTCGGGCTTACTGGGCAGGAGAGACACCAGAT...CTCTGTTCTTGATGAGGAATGTACTGCTTTGTTCATGCTGCCCCTACCAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCGCATCTGCCCACGGATGTCCTGGCTATCAGAGTTGTTGAGTTTCAGCACAGAAGTGTTTTCTGGCTaGGAATCCTGGGCTGGGATG | + |
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Preference number: 2 (lower is better) Translates to: PRICPRMSWLSELLSFSTEVFSG*ESWAGM Trigger: CATCCCAGCCCAGGATTCGCAGCCAGAAAACACTTC...TGTGCTGAAACTCAACAACTCTGATAGCCAGGACATCCGTGGGCAGATGCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR-3UTR CCA 90 bp | TTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAACCCTTGTCTAGCCCGAGAGGCAGCTaGACATTGCACCAGCATGTT | + |
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Preference number: 2 (lower is better) Translates to: LGPHQEDASHSEIPEPLSSPRGS*TLHQHV Trigger: AACATGCTGGTGCAATGTCCAGCTGCCTCTCGGGCT...AGACAAGGGTTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCCTGGTAGGGGCAGCATGAACAAAGCAGTACATTCCTCATCAAGAACAGAGAGCCCGAGAGGCAGCTaGACATTGCACCAGCATGTT | + |
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Preference number: 2 (lower is better) Translates to: GPGRGSMNKAVHSSSRTESPRGS*TLHQHV Trigger: AACATGCTGGTGCAATGTCCAGCTGCCTCTCGGGCT...CTCTGTTCTTGATGAGGAATGTACTGCTTTGTTCATGCTGCCCCTACCAGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
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| 3UTR-3UTR CCA 90 bp | GATCCCAGAACCCTTGTCTCTGTCCATCAGGACCACAAAGCACCAAGAAGCAGTAGCCCGAGAGGCAGCTaGACATTGCACCAGCATGTT | + |
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Preference number: 2 (lower is better) Translates to: DPRTLVSVHQDHKAPRSSSPRGS*TLHQHV Trigger: AACATGCTGGTGCAATGTCCAGCTGCCTCTCGGGCT...ACTGCTTCTTGGTGCTTTGTGGTCCTGATGGACAGAGACAAGGGTTCTGGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAACCCTTGTCTACAGACACTCAGCGCTaGTTTCAAGGCTGCTCAACA | + |
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Preference number: 2 (lower is better) Translates to: LGPHQEDASHSEIPEPLSTDTQR*FQGCST Trigger: TGTTGAGCAGCCTTGAAATCAGCGCTGAGTGTCTGT...AGACAAGGGTTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGGGCCACAGACACTCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCGGAAAAATTACAATCTaGTGTCTCTCCTGCCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: QEGHRHSALISRLLNNGSGKITI*CLSCPV Trigger: TACTGGGCAGGAGAGACACCAGATTGTAATTTTTCC...GCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGAGTGTCTGTGGCCCTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTCCTGGCTATCAGAGTTGTTGAGTTTCAGCACACCGGGAGGGCTACGCTGGGAAAGTTCTGGAAGATaGTACCAGGATCTTCCACAC | + |
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Preference number: 2 (lower is better) Translates to: MSWLSELLSFSTPGGLRWESSGR*YQDLPH Trigger: GTGTGGAAGATCCTGGTACCATCTTCCAGAACTTTC...CCAGCGTAGCCCTCCCGGTGTGCTGAAACTCAACAACTCTGATAGCCAGGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR-3UTR CCA 90 bp | ATACCCTGGTGTTTGACCCGCCTCCTGGACAGCTCTGCTGAAGTGTTTTCTGGCTGTTGTAGAAAGTTCTaGAAGATGGTACCAGGATCT | + |
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Preference number: 2 (lower is better) Translates to: IPWCLTRLLDSSAEVFSGCCRKF*KMVPGS Trigger: AGATCCTGGTACCATCTTCCAGAACTTTCTACAACA...GCCAGAAAACACTTCAGCAGAGCTGTCCAGGAGGCGGGTCAAACACCAGGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR CAA 90 bp | CCTAACTGCTCAGCAAACAGATGTCAGCAAACGATGAAAAGCCGTTaGCACTTGGCTTTGTGGTGTGAAGTTTCAGAAACACGCACCCAG | + |
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Preference number: 2 (lower is better) Translates to: PNCSANRCQQTMKSR*HLALWCEVSETRTQ Trigger: CTGGGTGCGTGTTTCTGAAACTTCACACCACAAAGCCAAGTGCAAACGGCTTTTCATCGTTTGCTGACATCTGTTTGCTGAGCAGTTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR CAA 90 bp | CAGCTGAACTGCTCAGGCCCATTAAAGTGTCAAACTGGTTACTTGTaGCTTGTTGTAGAAAGTTCTGGAAGATGGTACCAGGATCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: QLNCSGPLKCQTGYL*LVVESSGRWYQDLP Trigger: TGGAAGATCCTGGTACCATCTTCCAGAACTTTCTACAACAAGCAACAAGTAACCAGTTTGACACTTTAATGGGCCTGAGCAGTTCAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR GCA 72 bp | CTGGAGCGTGCCCGGATGCTATGGGCCCATTCTGGCTaGCCCGCATCTGCCCACGGATGTCCTGGCTATCAG | + |
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Preference number: 3 (lower is better) Translates to: LERARMLWAHSG*PASAHGCPGYQ Trigger: CTGATAGCCAGGACATCCGTGGGCAGATGCGGGGCAGCCAGAATGGGCCCATAGCATCCGGGCACGCTCCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| 3UTR CCA 72 bp | ATCACTGGAGCGTGCCCGGATGCTATGGGCCCATTCTaGCTGCCCCGCATCTGCCCACGGATGTCCTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: ITGACPDAMGPF*LPRICPRMSWL Trigger: TAGCCAGGACATCCGTGGGCAGATGCGGGGCAGCCAGAATGGGCCCATAGCATCCGGGCACGCTCCAGTGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR CCA 72 bp | CCTCCGCATCGCCTGCTCCCTGCTGCTTTGGAGGCTTaGCCTTTGCTGCTCTGCTGTGGTAGCCAGCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PPHRLLPAALEA*PLLLCCGSQQL Trigger: CAGCTGCTGGCTACCACAGCAGAGCAGCAAAGGCCAAGCCTCCAAAGCAGCAGGGAGCAGGCGATGCGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR GCA 72 bp | TTCTGGCTGCGAATCCTGGGCTGGGATGCCCTCCACTaGACGGTGGTTTGCTGTGGCTGGGCGTTGGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: FWLRILGWDALH*TVVCCGWALVT Trigger: TGTGACCAACGCCCAGCCACAGCAAACCACCGTGCAGTGGAGGGCATCCCAGCCCAGGATTCGCAGCCAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR CCA 72 bp | AGAGAGAGGTGGGTGAGTGACCCGCAAGGACGAAGGTaGCCTCCAGTCCGTGTCCCTGCCAGACATGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RERWVSDPQGRR*PPVRVPARHVP Trigger: AGGCACATGTCTGGCAGGGACACGGACTGGAGGCCACCTTCGTCCTTGCGGGTCACTCACCCACCTCTCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
||
| 3UTR CCA 72 bp | GGGCTGGGATGCCCTCCACTGCACGGTGGTTTGCTGTaGCTGGGCGTTGGTCACACTGGTCCTGATGGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: GLGCPPLHGGLL*LGVGHTGPDGR Trigger: TCTACCATCAGGACCAGTGTGACCAACGCCCAGCCACAGCAAACCACCGTGCAGTGGAGGGCATCCCAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR CCA 72 bp | CTCTTCCTCCTCCGCATCGCCTGCTCCCTGCTGCTTTaGAGGCTTGGCCTTTGCTGCTCTGCTGTGGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LFLLRIACSLLL*RLGLCCSAVVA Trigger: GGCTACCACAGCAGAGCAGCAAAGGCCAAGCCTCCAAAGCAGCAGGGAGCAGGCGATGCGGAGGAGGAAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR GCA 72 bp | CTGAAGTGTTTTCTGGCTGCGAATCCTGGGCTGGGATaGCCTCCACTGCACGGTGGTTTGCTGTGGCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LKCFLAANPGLG*PPLHGGLLWLG Trigger: GCCCAGCCACAGCAAACCACCGTGCAGTGGAGGGCATCCCAGCCCAGGATTCGCAGCCAGAAAACACTTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR GCA 72 bp | CATCACTCCTCTTCCTCCTCCGCATCGCCTGCTCCCTaGTGCTTTGGAGGCTTGGCCTTTGCTGCTCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HHSSSSSASPAP*CFGGLAFAALL Trigger: CAGCAGAGCAGCAAAGGCCAAGCCTCCAAAGCAGCAGGGAGCAGGCGATGCGGAGGAGGAAGAGGAGTGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR GCA 72 bp | GAGTCACCATCACTCCTCTTCCTCCTCCGCATCGCCTaGTCCCTGCTGCTTTGGAGGCTTGGCCTTTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ESPSLLFLLRIA*SLLLWRLGLCC Trigger: GCAGCAAAGGCCAAGCCTCCAAAGCAGCAGGGAGCAGGCGATGCGGAGGAGGAAGAGGAGTGATGGTGACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR CCA 72 bp | CAGCCTCACTCCCTAGCTCAGCCCCAGTGGATACCCTaGTGTTTGACCCGCCTCCTGGACAGCTCTGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QPHSLAQPQWIP*CLTRLLDSSAE Trigger: TTCAGCAGAGCTGTCCAGGAGGCGGGTCAAACACCAGGGTATCCACTGGGGCTGAGCTAGGGAGTGAGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR CCA 72 bp | TGGGATGCCCTCCACTGCACGGTGGTTTGCTGTGGCTaGGCGTTGGTCACACTGGTCCTGATGGTAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: WDALHCTVVCCG*ALVTLVLMVEQ Trigger: CTGTTCTACCATCAGGACCAGTGTGACCAACGCCCAGCCACAGCAAACCACCGTGCAGTGGAGGGCATCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR TCA 72 bp | GCATCTGCCCACGGATGTCCTGGCTATCAGAGTTGTTaGGTTTCAGCACACCGGGAGGGCTACGCTGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: ASAHGCPGYQSC*VSAHREGYAGS Trigger: ACTGCCAGCGTAGCCCTCCCGGTGTGCTGAAACTCAACAACTCTGATAGCCAGGACATCCGTGGGCAGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR GCA 72 bp | GAACCAGACACAGTGCTGTGTGCCCATGATCCCAGTTaGCTGGGACGCTCAGTACCACAGCCACAAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: EPDTVLCAHDPS*LGRSVPQPQGE Trigger: CTCACCTTGTGGCTGTGGTACTGAGCGTCCCAGGCAACTGGGATCATGGGCACACAGCACTGTGTCTGGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR GCA 72 bp | CGGTGCTGGAAAGGCCAGAGTTCAGCTCCACTCTACTaGTCCCTCCTGCACCTGTGCCATCCATCACACCAT | + |
|
Preference number: 3 (lower is better) Translates to: RCWKGQSSAPLY*SLLHLCHPSHH Trigger: ATGGTGTGATGGATGGCACAGGTGCAGGAGGGAGCAGTAGAGTGGAGCTGAACTCTGGCCTTTCCAGCACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR GCA 72 bp | ATTTTGAATAGAGTGGATCACTGGAGCGTGCCCGGATaGTATGGGCCCATTCTGGCTGCCCCGCATCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: ILNRVDHWSVPG*YGPILAAPHLP Trigger: GGGCAGATGCGGGGCAGCCAGAATGGGCCCATAGCATCCGGGCACGCTCCAGTGATCCACTCTATTCAAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR CCA 72 bp | CAGACACAGTGCTGTGTGCCCATGATCCCAGTTGCCTaGGACGCTCAGTACCACAGCCACAAGGTGAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: QTQCCVPMIPVA*DAQYHSHKVRY Trigger: GTACCTCACCTTGTGGCTGTGGTACTGAGCGTCCCAGGCAACTGGGATCATGGGCACACAGCACTGTGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR CCA 72 bp | GACAGCTCTGCTGAAGTGTTTTCTGGCTGCGAATCCTaGGCTGGGATGCCCTCCACTGCACGGTGGTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: DSSAEVFSGCES*AGMPSTARWFA Trigger: AGCAAACCACCGTGCAGTGGAGGGCATCCCAGCCCAGGATTCGCAGCCAGAAAACACTTCAGCAGAGCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR CCA 72 bp | CCATTCTGGCTGCCCCGCATCTGCCCACGGATGTCCTaGCTATCAGAGTTGTTGAGTTTCAGCACACCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PFWLPRICPRMS*LSELLSFSTPG Trigger: TCCCGGTGTGCTGAAACTCAACAACTCTGATAGCCAGGACATCCGTGGGCAGATGCGGGGCAGCCAGAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR GCA 72 bp | AGTTCAGCTCCACTCTACTGCTCCCTCCTGCACCTGTaGCATCCATCACACCATACCATCACACACGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: SSAPLYCSLLHL*HPSHHTITHGT Trigger: GGTCCCGTGTGTGATGGTATGGTGTGATGGATGGCACAGGTGCAGGAGGGAGCAGTAGAGTGGAGCTGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR-3UTR CAA 90 bp | GTTGCAGGAAGCCACATTGTTCATGGTCCTGTTAGGAGACATCGAGTAGGTGGGTGCTGTGGCTGGGCGTaGGTCACACTGGTCCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: VAGSHIVHGPVRRHRVGGCCGWA*VTLVLM Trigger: CATCAGGACCAGTGTGACCAACGCCCAGCCACAGCA...CCCACCTACTCGATGTCTCCTAACAGGACCATGAACAATGTGGCTTCCTGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR TCA 72 bp | TACATTCCTCATCAAGAACAGAGAGAGGTGGGTGAGTaGCCCGCAAGGACGAAGGTGGCCTCCAGTCCGTGT | + |
|
Preference number: 3 (lower is better) Translates to: YIPHQEQREVGE*PARTKVASSPC Trigger: ACACGGACTGGAGGCCACCTTCGTCCTTGCGGGTCACTCACCCACCTCTCTCTGTTCTTGATGAGGAATGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
||
| 3UTR GCA 72 bp | AAGGCCAGAGTTCAGCTCCACTCTACTGCTCCCTCCTaGACCTGTGCCATCCATCACACCATACCATCACAC | + |
|
Preference number: 3 (lower is better) Translates to: KARVQLHSTAPS*TCAIHHTIPSH Trigger: GTGTGATGGTATGGTGTGATGGATGGCACAGGTGCAGGAGGGAGCAGTAGAGTGGAGCTGAACTCTGGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR-3UTR CAA 90 bp | ATCAAGAACAGAGAGAGGTGGGTGAGTGACCCGCAAGGACGAAGGTGGCCTCCAAGAGGCAGCTGGACATaGCACCAGCATGTTCTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: IKNRERWVSDPQGRRWPPRGSWT*HQHVLL Trigger: TAACAGAACATGCTGGTGCAATGTCCAGCTGCCTCT...TGGAGGCCACCTTCGTCCTTGCGGGTCACTCACCCACCTCTCTCTGTTCTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAGGGCCACAGACACTCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCAGAGGCAGCTGGACATaGCACCAGCATGTTCTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QEGHRHSALISRLLNNGSRGSWT*HQHVLL Trigger: TAACAGAACATGCTGGTGCAATGTCCAGCTGCCTCT...GCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGAGTGTCTGTGGCCCTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTGATGACATCACTAAGGATGGAGCCCTTATGGGCCAGGAGGGCCACAGACAGAGGCAGCTGGACATaGCACCAGCATGTTCTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: VVMTSLRMEPLWARRATDRGSWT*HQHVLL Trigger: TAACAGAACATGCTGGTGCAATGTCCAGCTGCCTCT...GTCTGTGGCCCTCCTGGCCCATAAGGGCTCCATCCTTAGTGATGTCATCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
||
| 3UTR TCA 72 bp | GCTCACCACTTAGACCAGTCAACTGGAAAGGGTTCATaGCTCCCTCAGAACCAGACACAGTGCTGTGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: AHHLDQSTGKGS*LPQNQTQCCVP Trigger: GGGCACACAGCACTGTGTCTGGTTCTGAGGGAGTCATGAACCCTTTCCAGTTGACTGGTCTAAGTGGTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR GCA 72 bp | AGTAAACACTTTCGCCAAGAAACTACTGCCCCTGAGTaGTGCGGTGCTGGAAAGGCCAGAGTTCAGCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SKHFRQETTAPE*CGAGKARVQLH Trigger: GTGGAGCTGAACTCTGGCCTTTCCAGCACCGCAGCACTCAGGGGCAGTAGTTTCTTGGCGAAAGTGTTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR-3UTR CAA 90 bp | GGCCCTGGTAGGGGCAGCATGAACAAAGCAGTACATTCCTCATCAAGAACAGAGGAGATCCCAGAACCCTaGTCTCTGTCCATCAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: GPGRGSMNKAVHSSSRTEEIPEP*SLSIRT Trigger: GGTCCTGATGGACAGAGACAAGGGTTCTGGGATCTC...CTCTGTTCTTGATGAGGAATGTACTGCTTTGTTCATGCTGCCCCTACCAGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCGAATCCTGGGCTGGGATGCCCTCCACTGCACGGTGGTTTGCTGTGGCTGCAAACTGGTTACTTGTaGCTTGTTGTAGAAAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: AANPGLGCPPLHGGLLWLQTGYL*LVVESS Trigger: AGAACTTTCTACAACAAGCAACAAGTAACCAGTTTG...CAGCCACAGCAAACCACCGTGCAGTGGAGGGCATCCCAGCCCAGGATTCGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR TCA 72 bp | AGCAGACTGTCATGGCAGACAGCCCACTCTACATGCTaGTGTTATGATCCTCAAGGCCAGCCTCCTAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: SRLSWQTAHSTC*CYDPQGQPPNC Trigger: GCAGTTAGGAGGCTGGCCTTGAGGATCATAACATCAGCATGTAGAGTGGGCTGTCTGCCATGACAGTCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR-3UTR CAA 90 bp | TTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAACCCTTGTCTAGAGGCAGCTGGACATaGCACCAGCATGTTCTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: LGPHQEDASHSEIPEPLSRGSWT*HQHVLL Trigger: TAACAGAACATGCTGGTGCAATGTCCAGCTGCCTCT...AGACAAGGGTTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
||
| 3UTR TCA 72 bp | ACATCGAGTAGGTGGGGCCTTTCACTGATTCCGGCTTaGCATCATCCATGTAACCAGATGACAGGTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TSSRWGLSLIPA*HHPCNQMTGLL Trigger: CAGGAGACCTGTCATCTGGTTACATGGATGATGTCAAGCCGGAATCAGTGAAAGGCCCCACCTACTCGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR CCA 72 bp | GTTTTCTGGATAGAGATTTTGAATAGAGTGGATCACTaGAGCGTGCCCGGATGCTATGGGCCCATTCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VFWIEILNRVDH*SVPGCYGPILA Trigger: AGCCAGAATGGGCCCATAGCATCCGGGCACGCTCCAGTGATCCACTCTATTCAAAATCTCTATCCAGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR TCA 72 bp | ATGGAAGAGCTGCCCGTATTGAGTGAACGTAAGGCATaGGAAGGGTTGCAGCTTGTCTGTCATCCAAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: MEELPVLSERKA*EGLQLVCHPKD Trigger: GTCTTTTGGATGACAGACAAGCTGCAACCCTTCTCATGCCTTACGTTCACTCAATACGGGCAGCTCTTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR TCA 72 bp | AAAAGGAGTCAGGAGCCACAGCTTACTGCGGCACTGTaGTTCACAGCTGTCTTGGAAGCCATAGCCTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: KRSQEPQLTAAL*FTAVLEAIAYK Trigger: TTTATAGGCTATGGCTTCCAAGACAGCTGTGAATCACAGTGCCGCAGTAAGCTGTGGCTCCTGACTCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR TCA 72 bp | CTCCTAACTGCTCAGCAAACAGATGTCAGCAAACGATaGAAAGCCGTTTGCACTTGGCTTTGTGGTGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLTAQQTDVSKR*KAVCTWLCGVK Trigger: CTTCACACCACAAAGCCAAGTGCAAACGGCTTTTCATCGTTTGCTGACATCTGTTTGCTGAGCAGTTAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR-3UTR CAA 90 bp | GTTGCAGGAAGCCACATTGTTCATGGTCCTGTTAGGAGACATCGAGTAGGTGGGTGTCAAACTGGTTACTaGTTGCTTGTTGTAGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: VAGSHIVHGPVRRHRVGGCQTGY*LLVVES Trigger: ACTTTCTACAACAAGCAACAAGTAACCAGTTTGACA...CCCACCTACTCGATGTCTCCTAACAGGACCATGAACAATGTGGCTTCCTGCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR TCA 72 bp | AACGATGAAAAGCCGTTTGCACTTGGCTTTGTGGTGTaGAGTTTCAGAAACACGCACCCAGCAAGATGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: NDEKPFALGFVV*SFRNTHPARWF Trigger: AAACCATCTTGCTGGGTGCGTGTTTCTGAAACTTCACACCACAAAGCCAAGTGCAAACGGCTTTTCATCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR CCA 72 bp | GCAGCTGAACTGCTCAGGCCCATTAAAGTGTCAAACTaGTTACTTGTTGCTTGTTGTAGAAAGTTCTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: AAELLRPIKVSN*LLVACCRKFWK Trigger: CTTCCAGAACTTTCTACAACAAGCAACAAGTAACCAGTTTGACACTTTAATGGGCCTGAGCAGTTCAGCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| CDS-3UTR CCA 90 bp | CACTTAGCCTCAGCAGAGTCCCCCAAGAGACCCTCGTGCGTGGGAACGGGAGGCTTCCAGGGAGCCTCATaGGCGGGTCCAGAGCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: HLASAESPKRPSCVGTGGFQGAS*AGPEPR Trigger: TCGAGGCTCTGGACCCGCCCATGAGGCTCCCTGGAA...GCCTCCCGTTCCCACGCACGAGGGTCTCTTGGGGGACTCTGCTGAGGCTAAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| CDS-3UTR TCA 90 bp | TGGTGTCTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCAGCATCAGCAGCTGCAGGGCTaGCCCGAGAGCTCCGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: WCLSCPVSPRGSWTLHQHQQLQG*PESSDH Trigger: GTGGTCGGAGCTCTCGGGTCAGCCCTGCAGCTGCTG...ATGCTGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAGACACCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR TCA 90 bp | CAGGAGGGCCACAGACACTCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCCAGCAGCTGCAGGGCTaGCCCGAGAGCTCCGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: QEGHRHSALISRLLNNGSQQLQG*PESSDH Trigger: GTGGTCGGAGCTCTCGGGTCAGCCCTGCAGCTGCTG...GCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGAGTGTCTGTGGCCCTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR GCA 90 bp | TGGGATGCCCTCCACTGCACGGTGGTTTGCTGTGGCTGGGCGTTGGTCACACTGTCTGCCTCAAAGGCTTaGAGGGGCCTTCCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WDALHCTVVCCGWALVTLSASKA*RGLPGS Trigger: GCTCCCTGGAAGGCCCCTGCAAGCCTTTGAGGCAGA...CAGTGTGACCAACGCCCAGCCACAGCAAACCACCGTGCAGTGGAGGGCATCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGGCCACAGACACTCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCCCGGGAGGGCTACGCTaGCAGTCAGACCTGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QEGHRHSALISRLLNNGSPGGLR*QSDLGP Trigger: AGGGCCCAGGTCTGACTGCCAGCGTAGCCCTCCCGG...GCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGAGTGTCTGTGGCCCTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | ACACTCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCTCGGGCCTCCCAGCCGTGCCCGGATGCTATaGGCCCATTCTGGCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLSADFKAAQQWQLGPPSRARML*AHSGCP Trigger: GGGGCAGCCAGAATGGGCCCATAGCATCCGGGCACG...GCTGGGAGGCCCGAGCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGAGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR TCA 90 bp | GCTGCACACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCAGCAGCTGCAGGGCTaGCCCGAGAGCTCCGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: AAHSSLGPHQEDASHSEIQQLQG*PESSDH Trigger: GTGGTCGGAGCTCTCGGGTCAGCCCTGCAGCTGCTG...GATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTGTGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR GCA 90 bp | AATGGCAGCTCGGGCCTCCCAGCTAGCCCTCCCTCAAACCCAAACACACACAGCCACTGCACGGTGGTTTaGTGTGGCTGGGCGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NGSSGLPASPPSNPNTHSHCTVV*CGWALV Trigger: GACCAACGCCCAGCCACAGCAAACCACCGTGCAGTG...GCTGTGTGTGTTTGGGTTTGAGGGAGGGCTAGCTGGGAGGCCCGAGCTGCCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | ACACTCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCTCGGGCCTCCCAGCTTCCAGGGAGCCTCATaGGCGGGTCCAGAGCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TLSADFKAAQQWQLGPPSFQGAS*AGPEPR Trigger: TCGAGGCTCTGGACCCGCCCATGAGGCTCCCTGGAA...GCTGGGAGGCCCGAGCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGAGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCAGCATGTTCTGTTCCAGGGAGCCTCATaGGCGGGTCCAGAGCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSCPVSPRGSWTLHQHVLFQGAS*AGPEPR Trigger: TCGAGGCTCTGGACCCGCCCATGAGGCTCCCTGGAA...CAGAACATGCTGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| 3UTR CAA 72 bp | GCCCTCCACTGCACGGTGGTTTGCTGTGGCTGGGCGTaGGTCACACTGGTCCTGATGGTAGAACAGCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALHCTVVCCGWA*VTLVLMVEQHL Trigger: GAGGTGCTGTTCTACCATCAGGACCAGTGTGACCAACGCCCAGCCACAGCAAACCACCGTGCAGTGGAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR CAA 72 bp | CCCCGCATCTGCCCACGGATGTCCTGGCTATCAGAGTaGTTGAGTTTCAGCACACCGGGAGGGCTACGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRICPRMSWLSE*LSFSTPGGLRW Trigger: CCAGCGTAGCCCTCCCGGTGTGCTGAAACTCAACAACTCTGATAGCCAGGACATCCGTGGGCAGATGCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| CDS-3UTR TCA 90 bp | ATCAAGAACAGAGAGAGGTGGGTGAGTGACCCGCAAGGACGAAGGTGGCCTCCAGGTCTCCCTGGTGTTTaGCCCGCCTCCTGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKNRERWVSDPQGRRWPPGLPGV*PASWTA Trigger: AGCTGTCCAGGAGGCGGGTCAAACACCAGGGAGACC...TGGAGGCCACCTTCGTCCTTGCGGGTCACTCACCCACCTCTCTCTGTTCTTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCACACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCGTTGCGCCCACAGCTaGCACACAGCTCTGTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: AAHSSLGPHQEDASHSEIRCAHS*HTALSG Trigger: CCCGGACAGAGCTGTGTGGCAGCTGTGGGCGCAACG...GATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTGTGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | CCCCGCATCTGCCCACGGATGTCCTGGCTATCAGAGTTGTTGAGTTTCAGCACACGTTGCGCCCACAGCTaGCACACAGCTCTGTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRICPRMSWLSELLSFSTRCAHS*HTALSG Trigger: CCCGGACAGAGCTGTGTGGCAGCTGTGGGCGCAACG...TGTGCTGAAACTCAACAACTCTGATAGCCAGGACATCCGTGGGCAGATGCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | TGGTGTCTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCAGCATCACTGCACGGTGGTTTaGTGTGGCTGGGCGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WCLSCPVSPRGSWTLHQHHCTVV*CGWALV Trigger: GACCAACGCCCAGCCACAGCAAACCACCGTGCAGTG...ATGCTGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAGACACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR GCA 90 bp | AATGGCAGCTCGGGCCTCCCAGCTAGCCCTCCCTCAAACCCAAACACACACAGCTCGCCTGCTCCCTGCTaGTTTGGAGGCTTGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NGSSGLPASPPSNPNTHSSPAPC*FGGLAF Trigger: AAAGGCCAAGCCTCCAAAGCAGCAGGGAGCAGGCGA...GCTGTGTGTGTTTGGGTTTGAGGGAGGGCTAGCTGGGAGGCCCGAGCTGCCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR CCA 90 bp | ATCAAGAACAGAGAGAGGTGGGTGAGTGACCCGCAAGGACGAAGGTGGCCTCCATCCAGATCACAGTGCTaGCAGACGGCGAGCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IKNRERWVSDPQGRRWPPSRSQC*QTASRR Trigger: CCTGCGGCTCGCCGTCTGCCAGCACTGTGATCTGGA...TGGAGGCCACCTTCGTCCTTGCGGGTCACTCACCCACCTCTCTCTGTTCTTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGGCCACAGACACTCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCCTGCGAATCCTGGGCTaGGATGCCCTCCACTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: QEGHRHSALISRLLNNGSLRILG*DALHCT Trigger: CGTGCAGTGGAGGGCATCCCAGCCCAGGATTCGCAG...GCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGAGTGTCTGTGGCCCTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| 3UTR CAA 72 bp | CGCATCTGCCCACGGATGTCCTGGCTATCAGAGTTGTaGAGTTTCAGCACACCGGGAGGGCTACGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RICPRMSWLSEL*SFSTPGGLRWQ Trigger: CTGCCAGCGTAGCCCTCCCGGTGTGCTGAAACTCAACAACTCTGATAGCCAGGACATCCGTGGGCAGATGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| CDS-3UTR TCA 90 bp | CCCGGATGCTATGGGCCCATTCTGGCTGCCCCGCATCTGCCCACGGATGTCCTGGACTCAAGGCCAACATaGAGTCCAAGTGTGCGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PGCYGPILAAPHLPTDVLDSRPT*SPSVRY Trigger: ATAACGCACACTTGGACTTCATGTTGGCCTTGAGTC...CAGGACATCCGTGGGCAGATGCGGGGCAGCCAGAATGGGCCCATAGCATCCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | ATCAAGAACAGAGAGAGGTGGGTGAGTGACCCGCAAGGACGAAGGTGGCCTCCATCTGCCTCAAAGGCTTaGAGGGGCCTTCCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IKNRERWVSDPQGRRWPPSASKA*RGLPGS Trigger: GCTCCCTGGAAGGCCCCTGCAAGCCTTTGAGGCAGA...TGGAGGCCACCTTCGTCCTTGCGGGTCACTCACCCACCTCTCTCTGTTCTTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | GTGGTGATGACATCACTAAGGATGGAGCCCTTATGGGCCAGGAGGGCCACAGACTCTGCCTCAAAGGCTTaGAGGGGCCTTCCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VVMTSLRMEPLWARRATDSASKA*RGLPGS Trigger: GCTCCCTGGAAGGCCCCTGCAAGCCTTTGAGGCAGA...GTCTGTGGCCCTCCTGGCCCATAAGGGCTCCATCCTTAGTGATGTCATCACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | GTGGTGATGACATCACTAAGGATGGAGCCCTTATGGGCCAGGAGGGCCACAGACAATCCTGGGCTGGGATaGCCTCCACTGCACGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VVMTSLRMEPLWARRATDNPGLG*PPLHGG Trigger: ACCACCGTGCAGTGGAGGGCATCCCAGCCCAGGATT...GTCTGTGGCCCTCCTGGCCCATAAGGGCTCCATCCTTAGTGATGTCATCACCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCAGCATGTTCTGTGGCCTTTGCTGCTCTaGTGTGGTAGCCAGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSCPVSPRGSWTLHQHVLWPLLL*CGSQQL Trigger: CAGCTGCTGGCTACCACAGCAGAGCAGCAAAGGCCA...CAGAACATGCTGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR GCA 90 bp | ACACTCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCTCGGGCCTCCCAGCTGGAGGCTTGGCCTTTaGTGCTCTGCTGTGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLSADFKAAQQWQLGPPSWRLGL*CSAVVA Trigger: GGCTACCACAGCAGAGCAGCAAAGGCCAAGCCTCCA...GCTGGGAGGCCCGAGCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCACACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCGCATCGCCTGCTCCCTaGTGCTTTGGAGGCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AAHSSLGPHQEDASHSEIASPAP*CFGGLA Trigger: GGCCAAGCCTCCAAAGCAGCAGGGAGCAGGCGATGC...GATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTGTGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR CCA 90 bp | AAGTGTTTTCTGGCTGCGAATCCTGGGCTGGGATGCCCTCCACTGCACGGTGGTCTCAGCGCTGTCCTTTaGGGACTGCCGGCTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KCFLAANPGLGCPPLHGGLSAVL*GLPASV Trigger: AACAGAAGCCGGCAGTCCCCAAAGGACAGCGCTGAG...ACCACCGTGCAGTGGAGGGCATCCCAGCCCAGGATTCGCAGCCAGAAAACACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| CDS-3UTR CCA 90 bp | AATGGCAGCTCGGGCCTCCCAGCTAGCCCTCCCTCAAACCCAAACACACACAGCCCTGCTCTACCATGCTaGTGGCCTGTCCCTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: NGSSGLPASPPSNPNTHSPALPC*WPVPHS Trigger: AGAATGAGGGACAGGCCACCAGCATGGTAGAGCAGG...GCTGTGTGTGTTTGGGTTTGAGGGAGGGCTAGCTGGGAGGCCCGAGCTGCCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CCA 90 bp | TCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCTCGGGCCTCCCAGCTAGCGCTGGCAGTCAGACCTaGGCCCTGACGGTAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SALISRLLNNGSSGLPASAGSQT*ALTVSS Trigger: TGAACTTACCGTCAGGGCCCAGGTCTGACTGCCAGC...GCTAGCTGGGAGGCCCGAGCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | GAACCCTTGTCTCTGTCCATCAGGACCACAAAGCACCAAGAAGCAGTGGTGATGCCGGGAGGGCTACGCTaGCAGTCAGACCTGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EPLSLSIRTTKHQEAVVMPGGLR*QSDLGP Trigger: AGGGCCCAGGTCTGACTGCCAGCGTAGCCCTCCCGG...CATCACCACTGCTTCTTGGTGCTTTGTGGTCCTGATGGACAGAGACAAGGGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | AATGGCAGCTCGGGCCTCCCAGCTAGCCCTCCCTCAAACCCAAACACACACAGCGCTGCTTTGGAGGCTTaGCCTTTGCTGCTCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NGSSGLPASPPSNPNTHSAALEA*PLLLCC Trigger: ACAGCAGAGCAGCAAAGGCCAAGCCTCCAAAGCAGC...GCTGTGTGTGTTTGGGTTTGAGGGAGGGCTAGCTGGGAGGCCCGAGCTGCCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCTGGTAGGGGCAGCATGAACAAAGCAGTACATTCCTCATCAAGAACAGAGCGTTGCGCCCACAGCTaGCACACAGCTCTGTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GPGRGSMNKAVHSSSRTERCAHS*HTALSG Trigger: CCCGGACAGAGCTGTGTGGCAGCTGTGGGCGCAACG...CTCTGTTCTTGATGAGGAATGTACTGCTTTGTTCATGCTGCCCCTACCAGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | TCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCTCGGGCCTCCCAGCTAGCACTGTAGAAGGGGTCTaGCTCAAAGGCTTGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SALISRLLNNGSSGLPASTVEGV*LKGLQG Trigger: CCCCTGCAAGCCTTTGAGGCAGACCCCTTCTACAGT...GCTAGCTGGGAGGCCCGAGCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | AATGGCAGCTCGGGCCTCCCAGCTAGCCCTCCCTCAAACCCAAACACACACAGCGCCTGTCCCTCATTCTaGAGACTCAAGGCCAACATG | + |
|
Preference number: 4 (lower is better) Translates to: NGSSGLPASPPSNPNTHSACPSF*RLKANM Trigger: CATGTTGGCCTTGAGTCTGCAGAATGAGGGACAGGC...GCTGTGTGTGTTTGGGTTTGAGGGAGGGCTAGCTGGGAGGCCCGAGCTGCCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | ATCAAGAACAGAGAGAGGTGGGTGAGTGACCCGCAAGGACGAAGGTGGCCTCCATGGCCTTTGCTGCTCTaGTGTGGTAGCCAGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IKNRERWVSDPQGRRWPPWPLLL*CGSQQL Trigger: CAGCTGCTGGCTACCACAGCAGAGCAGCAAAGGCCA...TGGAGGCCACCTTCGTCCTTGCGGGTCACTCACCCACCTCTCTCTGTTCTTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR GCA 90 bp | ATCAAGAACAGAGAGAGGTGGGTGAGTGACCCGCAAGGACGAAGGTGGCCTCCATGGAGGCTTGGCCTTTaGTGCTCTGCTGTGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IKNRERWVSDPQGRRWPPWRLGL*CSAVVA Trigger: GGCTACCACAGCAGAGCAGCAAAGGCCAAGCCTCCA...TGGAGGCCACCTTCGTCCTTGCGGGTCACTCACCCACCTCTCTCTGTTCTTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR GCA 90 bp | AATCTGGTGTCTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCATGGAGGCTTGGCCTTTaGTGCTCTGCTGTGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLVSLLPSKPERQLDIAPWRLGL*CSAVVA Trigger: GGCTACCACAGCAGAGCAGCAAAGGCCAAGCCTCCA...TGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAGACACCAGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR GCA 90 bp | ATCAAGAACAGAGAGAGGTGGGTGAGTGACCCGCAAGGACGAAGGTGGCCTCCATCGCCTGCTCCCTGCTaGTTTGGAGGCTTGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IKNRERWVSDPQGRRWPPSPAPC*FGGLAF Trigger: AAAGGCCAAGCCTCCAAAGCAGCAGGGAGCAGGCGA...TGGAGGCCACCTTCGTCCTTGCGGGTCACTCACCCACCTCTCTCTGTTCTTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR GCA 90 bp | GTGGTGATGACATCACTAAGGATGGAGCCCTTATGGGCCAGGAGGGCCACAGACTCGCCTGCTCCCTGCTaGTTTGGAGGCTTGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VVMTSLRMEPLWARRATDSPAPC*FGGLAF Trigger: AAAGGCCAAGCCTCCAAAGCAGCAGGGAGCAGGCGA...GTCTGTGGCCCTCCTGGCCCATAAGGGCTCCATCCTTAGTGATGTCATCACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR GCA 90 bp | CACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAAGCATCGCCTGCTCCCTaGTGCTTTGGAGGCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSSLGPHQEDASHSEIPEASPAP*CFGGLA Trigger: GGCCAAGCCTCCAAAGCAGCAGGGAGCAGGCGATGC...TTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR CCA 90 bp | AATCTGGTGTCTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCACTCAGCGCTGTCCTTTaGGGACTGCCGGCTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NLVSLLPSKPERQLDIAPLSAVL*GLPASV Trigger: AACAGAAGCCGGCAGTCCCCAAAGGACAGCGCTGAG...TGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAGACACCAGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CCA 90 bp | GTGGTGATGACATCACTAAGGATGGAGCCCTTATGGGCCAGGAGGGCCACAGACGTGGTTTGCTGTGGCTaGGCGTTGGTCACACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VVMTSLRMEPLWARRATDVVCCG*ALVTLV Trigger: GACCAGTGTGACCAACGCCCAGCCACAGCAAACCAC...GTCTGTGGCCCTCCTGGCCCATAAGGGCTCCATCCTTAGTGATGTCATCACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTGATGACATCACTAAGGATGGAGCCCTTATGGGCCAGGAGGGCCACAGACGCTGGCAGTCAGACCTaGGCCCTGACGGTAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VVMTSLRMEPLWARRATDAGSQT*ALTVSS Trigger: TGAACTTACCGTCAGGGCCCAGGTCTGACTGCCAGC...GTCTGTGGCCCTCCTGGCCCATAAGGGCTCCATCCTTAGTGATGTCATCACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCTGGTAGGGGCAGCATGAACAAAGCAGTACATTCCTCATCAAGAACAGAGCGTGCCCGGATGCTATaGGCCCATTCTGGCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGRGSMNKAVHSSSRTERARML*AHSGCP Trigger: GGGGCAGCCAGAATGGGCCCATAGCATCCGGGCACG...CTCTGTTCTTGATGAGGAATGTACTGCTTTGTTCATGCTGCCCCTACCAGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| 3UTR CAA 72 bp | CTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATaGCACCAGCATGTTCTGTTATGCATGGGGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSCPVSPRGSWT*HQHVLLCMGWG Trigger: ACCCCACCCCATGCATAACAGAACATGCTGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
||
| 3UTR CAA 72 bp | CACTCCCTAGCTCAGCCCCAGTGGATACCCTGGTGTTaGACCCGCCTCCTGGACAGCTCTGCTGAAGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSLAQPQWIPWC*TRLLDSSAEVF Trigger: AAACACTTCAGCAGAGCTGTCCAGGAGGCGGGTCAAACACCAGGGTATCCACTGGGGCTGAGCTAGGGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| CDS-3UTR TCA 90 bp | AATCTGGTGTCTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCAGATCTTCCACACCCCTaGTGGAAGAGCTGCCCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NLVSLLPSKPERQLDIAPDLPHP*WKSCPY Trigger: ATACGGGCAGCTCTTCCATCAGGGGTGTGGAAGATC...TGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAGACACCAGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR GCA 90 bp | AATCTGGTGTCTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCAACTGTAGAAGGGGTCTaGCTCAAAGGCTTGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLVSLLPSKPERQLDIAPTVEGV*LKGLQG Trigger: CCCCTGCAAGCCTTTGAGGCAGACCCCTTCTACAGT...TGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAGACACCAGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | TGGTGTCTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCAGCATGAAGTGTTTTCTGGCTaGGAATCCTGGGCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: WCLSCPVSPRGSWTLHQHEVFSG*ESWAGM Trigger: CATCCCAGCCCAGGATTCGCAGCCAGAAAACACTTC...ATGCTGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAGACACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCTGGTAGGGGCAGCATGAACAAAGCAGTACATTCCTCATCAAGAACAGAGTCCAGATCACAGTGCTaGCAGACGGCGAGCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPGRGSMNKAVHSSSRTESRSQC*QTASRR Trigger: CCTGCGGCTCGCCGTCTGCCAGCACTGTGATCTGGA...CTCTGTTCTTGATGAGGAATGTACTGCTTTGTTCATGCTGCCCCTACCAGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCTGGTAGGGGCAGCATGAACAAAGCAGTACATTCCTCATCAAGAACAGAGCTGCGAATCCTGGGCTaGGATGCCCTCCACTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: GPGRGSMNKAVHSSSRTELRILG*DALHCT Trigger: CGTGCAGTGGAGGGCATCCCAGCCCAGGATTCGCAG...CTCTGTTCTTGATGAGGAATGTACTGCTTTGTTCATGCTGCCCCTACCAGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR TCA 90 bp | GCTGCACACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCGATCTTCCACACCCCTaGTGGAAGAGCTGCCCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: AAHSSLGPHQEDASHSEIDLPHP*WKSCPY Trigger: ATACGGGCAGCTCTTCCATCAGGGGTGTGGAAGATC...GATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTGTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGTCTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCAGCATTCTGTCTCCGCATGCTaGTTTAACTGCCTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WCLSCPVSPRGSWTLHQHSVSAC*FNCLFS Trigger: GGAGAAGAGGCAGTTAAAGCAGCATGCGGAGACAGA...ATGCTGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAGACACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR GCA 90 bp | GTGGTGATGACATCACTAAGGATGGAGCCCTTATGGGCCAGGAGGGCCACAGACTCTGAGGAGCTGGGATaGGATCCAGATTCTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVMTSLRMEPLWARRATDSEELG*DPDSVL Trigger: CAGGACAGAATCTGGATCGCATCCCAGCTCCTCAGA...GTCTGTGGCCCTCCTGGCCCATAAGGGCTCCATCCTTAGTGATGTCATCACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CCA 90 bp | CACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAACACGGTGGTTTGCTGTaGCTGGGCGTTGGTCACACT | + |
|
Preference number: 4 (lower is better) Translates to: HSSLGPHQEDASHSEIPEHGGLL*LGVGHT Trigger: AGTGTGACCAACGCCCAGCCACAGCAAACCACCGTG...TTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCAGCATGTTCTGATCCATGTAACCAGATaGCAGGTCTCCCTGGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSCPVSPRGSWTLHQHVLIHVTR*QVSLVF Trigger: AAACACCAGGGAGACCTGTCATCTGGTTACATGGAT...CAGAACATGCTGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR GCA 90 bp | GTGGTGATGACATCACTAAGGATGGAGCCCTTATGGGCCAGGAGGGCCACAGACCACCTGACAGTGCTCTaGAGCCATGTGAATGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VVMTSLRMEPLWARRATDHLTVL*SHVNVH Trigger: ATGGACATTCACATGGCTGCAGAGCACTGTCAGGTG...GTCTGTGGCCCTCCTGGCCCATAAGGGCTCCATCCTTAGTGATGTCATCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCACACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCGCCTGTCCCTCATTCTaGAGACTCAAGGCCAACATG | + |
|
Preference number: 4 (lower is better) Translates to: AAHSSLGPHQEDASHSEIACPSF*RLKANM Trigger: CATGTTGGCCTTGAGTCTGCAGAATGAGGGACAGGC...GATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTGTGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | GCTGCACACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCGAAGTGTTTTCTGGCTaGGAATCCTGGGCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: AAHSSLGPHQEDASHSEIEVFSG*ESWAGM Trigger: CATCCCAGCCCAGGATTCGCAGCCAGAAAACACTTC...GATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTGTGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR GCA 90 bp | GAACCCTTGTCTCTGTCCATCAGGACCACAAAGCACCAAGAAGCAGTGGTGATGTGGCCTTTGCTGCTCTaGTGTGGTAGCCAGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPLSLSIRTTKHQEAVVMWPLLL*CGSQQL Trigger: CAGCTGCTGGCTACCACAGCAGAGCAGCAAAGGCCA...CATCACCACTGCTTCTTGGTGCTTTGTGGTCCTGATGGACAGAGACAAGGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCAGCATGTTCTGAATGAGCAGTTCCTCTaGGTACAGCTCCTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSCPVSPRGSWTLHQHVLNEQFL*VQLLTE Trigger: TTCTGTGAGGAGCTGTACCCAGAGGAACTGCTCATT...CAGAACATGCTGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CCA 90 bp | GAACCCTTGTCTCTGTCCATCAGGACCACAAAGCACCAAGAAGCAGTGGTGATGGTGGTTTGCTGTGGCTaGGCGTTGGTCACACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EPLSLSIRTTKHQEAVVMVVCCG*ALVTLV Trigger: GACCAGTGTGACCAACGCCCAGCCACAGCAAACCAC...CATCACCACTGCTTCTTGGTGCTTTGTGGTCCTGATGGACAGAGACAAGGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCTGGTAGGGGCAGCATGAACAAAGCAGTACATTCCTCATCAAGAACAGAGCACGGTGGTTTGCTGTaGCTGGGCGTTGGTCACACT | + |
|
Preference number: 4 (lower is better) Translates to: GPGRGSMNKAVHSSSRTEHGGLL*LGVGHT Trigger: AGTGTGACCAACGCCCAGCCACAGCAAACCACCGTG...CTCTGTTCTTGATGAGGAATGTACTGCTTTGTTCATGCTGCCCCTACCAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | CACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAACTTCACTCCTCCCACTaGGCCCTGACGGTAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSSLGPHQEDASHSEIPELHSSH*ALTVSS Trigger: TGAACTTACCGTCAGGGCCCAGTGGGAGGAGTGAAG...TTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202064.2 |
||
| CDS-3UTR TCA 90 bp | AATGGCAGCTCGGGCCTCCCAGCTAGCCCTCCCTCAAACCCAAACACACACAGCACACCAATGTTCCTTTaGCAGTGGATTTCATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NGSSGLPASPPSNPNTHSTPMFL*QWISWM Trigger: CATCCATGAAATCCACTGTCAAAGGAACATTGGTGT...GCTGTGTGTGTTTGGGTTTGAGGGAGGGCTAGCTGGGAGGCCCGAGCTGCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR TCA 90 bp | CTTATGGGCCAGGAGGGCCACAGACACTCAGCGCTGATTTCAAGGCTGCTCAACTGCTCTGCAGCCATGTaGATGTCCATGTCAGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: LMGQEGHRHSALISRLLNCSAAM*MSMSDL Trigger: CAAATCTGACATGGACATTCACATGGCTGCAGAGCA...GTTGAGCAGCCTTGAAATCAGCGCTGAGTGTCTGTGGCCCTCCTGGCCCATAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTGATGACATCACTAAGGATGGAGCCCTTATGGGCCAGGAGGGCCACAGACTGCTCTGCAGCCATGTaGATGTCCATGTCAGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: VVMTSLRMEPLWARRATDCSAAM*MSMSDL Trigger: CAAATCTGACATGGACATTCACATGGCTGCAGAGCA...GTCTGTGGCCCTCCTGGCCCATAAGGGCTCCATCCTTAGTGATGTCATCACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAGGGCCACAGACACTCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCATCCATGTAACCAGATaGCAGGTCTCCCTGGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QEGHRHSALISRLLNNGSIHVTR*QVSLVF Trigger: AAACACCAGGGAGACCTGTCATCTGGTTACATGGAT...GCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGAGTGTCTGTGGCCCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCTGGTAGGGGCAGCATGAACAAAGCAGTACATTCCTCATCAAGAACAGAGACTGTAGAAGGGGTCTaGCTCAAAGGCTTGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GPGRGSMNKAVHSSSRTETVEGV*LKGLQG Trigger: CCCCTGCAAGCCTTTGAGGCAGACCCCTTCTACAGT...CTCTGTTCTTGATGAGGAATGTACTGCTTTGTTCATGCTGCCCCTACCAGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | AATCTGGTGTCTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCACATGAAGTCCAAGTGTaGGTTATTCTCAGCGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NLVSLLPSKPERQLDIAPHEVQV*VILSAV Trigger: GACAGCGCTGAGAATAACGCACACTTGGACTTCATG...TGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAGACACCAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | ATCAAGAACAGAGAGAGGTGGGTGAGTGACCCGCAAGGACGAAGGTGGCCTCCAAGGCATGAGAAGGGTTaGAGCTTGTCTGATGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IKNRERWVSDPQGRRWPPRHEKG*SLSDGQ Trigger: TTGACCATCAGACAAGCTGCAACCCTTCTCATGCCT...TGGAGGCCACCTTCGTCCTTGCGGGTCACTCACCCACCTCTCTCTGTTCTTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGAACCCTTGTCTCTGTCCATCAGGACCACAAAGCACCAAGAAGCAGTACCTCCTCTTCCAGCTaGACCCCACAGAACTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: DPRTLVSVHQDHKAPRSSTSSSS*TPQNSQ Trigger: CTGTGAGTTCTGTGGGGTGCAGCTGGAAGAGGAGGT...ACTGCTTCTTGGTGCTTTGTGGTCCTGATGGACAGAGACAAGGGTTCTGGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | GATCCCAGAACCCTTGTCTCTGTCCATCAGGACCACAAAGCACCAAGAAGCAGTCCTGCTCTACCATGCTaGTGGCCTGTCCCTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: DPRTLVSVHQDHKAPRSSPALPC*WPVPHS Trigger: AGAATGAGGGACAGGCCACCAGCATGGTAGAGCAGG...ACTGCTTCTTGGTGCTTTGTGGTCCTGATGGACAGAGACAAGGGTTCTGGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGGCCACAGACACTCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCAATGAGCAGTTCCTCTaGGTACAGCTCCTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QEGHRHSALISRLLNNGSNEQFL*VQLLTE Trigger: TTCTGTGAGGAGCTGTACCCAGAGGAACTGCTCATT...GCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGAGTGTCTGTGGCCCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCAGCATGTTCTGGAAAGTTCTGGAAGATaGTACCAGGATCTTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LSCPVSPRGSWTLHQHVLESSGR*YQDLPH Trigger: GTGTGGAAGATCCTGGTACCATCTTCCAGAACTTTC...CAGAACATGCTGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCTGGTAGGGGCAGCATGAACAAAGCAGTACATTCCTCATCAAGAACAGAGGCTGCTTTGGAGGCTTaGCCTTTGCTGCTCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GPGRGSMNKAVHSSSRTEAALEA*PLLLCC Trigger: ACAGCAGAGCAGCAAAGGCCAAGCCTCCAAAGCAGC...CTCTGTTCTTGATGAGGAATGTACTGCTTTGTTCATGCTGCCCCTACCAGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
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| 3UTR CAA 72 bp | TCAGACCTGGGCCCTGACGGTAAGTTCAACAGTCGGTaGCAGGAAGCCACATTGTTCATGGTCCTGTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDLGPDGKFNSR*QEATLFMVLLG Trigger: TCCTAACAGGACCATGAACAATGTGGCTTCCTGCAACCGACTGTTGAACTTACCGTCAGGGCCCAGGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| CDS-3UTR TCA 90 bp | TTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAACCCTTGTCTACACCTGATGGTCAATaGGCAGTTCCTCTGGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LGPHQEDASHSEIPEPLSTPDGQ*AVPLGT Trigger: TGTACCCAGAGGAACTGCTCATTGACCATCAGGTGT...AGACAAGGGTTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | TCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCTCGGGCCTCCCAGCTAGCTCTCCAACTTCTTGTTaGATTTACAGGTCACCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SALISRLLNNGSSGLPASSPTSC*IYRSPD Trigger: GTCAGGTGACCTGTAAATGCAACAAGAAGTTGGAGA...GCTAGCTGGGAGGCCCGAGCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR GCA 90 bp | GAACCCTTGTCTCTGTCCATCAGGACCACAAAGCACCAAGAAGCAGTGGTGATGTCTGAGGAGCTGGGATaGGATCCAGATTCTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPLSLSIRTTKHQEAVVMSEELG*DPDSVL Trigger: CAGGACAGAATCTGGATCGCATCCCAGCTCCTCAGA...CATCACCACTGCTTCTTGGTGCTTTGTGGTCCTGATGGACAGAGACAAGGGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGAACCCTTGTCTCTGTCCATCAGGACCACAAAGCACCAAGAAGCAGTTCTGAGGAGCTGGGATaGGATCCAGATTCTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DPRTLVSVHQDHKAPRSSSEELG*DPDSVL Trigger: CAGGACAGAATCTGGATCGCATCCCAGCTCCTCAGA...ACTGCTTCTTGGTGCTTTGTGGTCCTGATGGACAGAGACAAGGGTTCTGGGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CCA 90 bp | AATGGCAGCTCGGGCCTCCCAGCTAGCCCTCCCTCAAACCCAAACACACACAGCAAGATTATTTTGAACTaGAAACTGGGCTGCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: NGSSGLPASPPSNPNTHSKIILN*KLGCHA Trigger: AGCATGGCAGCCCAGTTTCCAGTTCAAAATAATCTT...GCTGTGTGTGTTTGGGTTTGAGGGAGGGCTAGCTGGGAGGCCCGAGCTGCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CCA 90 bp | ACCCCGTTTCTCAAAGCAGGATATGTCCTGTCACCCAAAGCAGAGACTACATGGCCTGCTCTACCATGCTaGTGGCCTGTCCCTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPFLKAGYVLSPKAETTWPALPC*WPVPHS Trigger: AGAATGAGGGACAGGCCACCAGCATGGTAGAGCAGG...CCATGTAGTCTCTGCTTTGGGTGACAGGACATATCCTGCTTTGAGAAACGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| CDS-3UTR CCA 90 bp | AATCTGGTGTCTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCAGAAAGTTCTGGAAGATaGTACCAGGATCTTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: NLVSLLPSKPERQLDIAPESSGR*YQDLPH Trigger: GTGTGGAAGATCCTGGTACCATCTTCCAGAACTTTC...TGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAGACACCAGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR TCA 90 bp | CACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAAGACTCAAGGCCAACATaGAGTCCAAGTGTGCGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: HSSLGPHQEDASHSEIPEDSRPT*SPSVRY Trigger: ATAACGCACACTTGGACTTCATGTTGGCCTTGAGTC...TTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR TCA 90 bp | TTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAACCCTTGTCTTTGTCTGATGGTCAATaGGCAGTTCCTCTGGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LGPHQEDASHSEIPEPLSLSDGQ*AVPLGT Trigger: TGTACCCAGAGGAACTGCTCATTGACCATCAGACAA...AGACAAGGGTTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR TCA 90 bp | CCAAACACACACAGCACAATCGCAAAGACACAAAATGGCCATAACCTAGGAAAAGGTCTCCCTGGTGTTTaGCCCGCCTCCTGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PNTHSTIAKTQNGHNLGKGLPGV*PASWTA Trigger: AGCTGTCCAGGAGGCGGGTCAAACACCAGGGAGACC...TTTTCCTAGGTTATGGCCATTTTGTGTCTTTGCGATTGTGCTGTGTGTGTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCTGGTAGGGGCAGCATGAACAAAGCAGTACATTCCTCATCAAGAACAGAGTCTGTCTCCGCATGCTaGTTTAACTGCCTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGRGSMNKAVHSSSRTESVSAC*FNCLFS Trigger: GGAGAAGAGGCAGTTAAAGCAGCATGCGGAGACAGA...CTCTGTTCTTGATGAGGAATGTACTGCTTTGTTCATGCTGCCCCTACCAGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR GCA 90 bp | CACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAAAGGCATGAGAAGGGTTaGAGCTTGTCTGATGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSSLGPHQEDASHSEIPERHEKG*SLSDGQ Trigger: TTGACCATCAGACAAGCTGCAACCCTTCTCATGCCT...TTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | TTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAACCCTTGTCTTGTCCATGTCAGATTTaGGGAACGGTTCCTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGPHQEDASHSEIPEPLSCPCQI*GTVPCR Trigger: TCTGCAAGGAACCGTTCCCCAAATCTGACATGGACA...AGACAAGGGTTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| 3UTR CAA 72 bp | CAGGAGGATGCTTCTCACTCTGAGATCCCAGAACCCTaGTCTCTGTCCATCAGGACCACAAAGCACCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QEDASHSEIPEP*SLSIRTTKHQE Trigger: TTCTTGGTGCTTTGTGGTCCTGATGGACAGAGACAAGGGTTCTGGGATCTCAGAGTGAGAAGCATCCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 ENSMUST00000202064.2 |
||
| CDS-3UTR TCA 90 bp | GAACCCTTGTCTCTGTCCATCAGGACCACAAAGCACCAAGAAGCAGTGGTGATGGACTCAAGGCCAACATaGAGTCCAAGTGTGCGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: EPLSLSIRTTKHQEAVVMDSRPT*SPSVRY Trigger: ATAACGCACACTTGGACTTCATGTTGGCCTTGAGTC...CATCACCACTGCTTCTTGGTGCTTTGTGGTCCTGATGGACAGAGACAAGGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | GGCCCTGGTAGGGGCAGCATGAACAAAGCAGTACATTCCTCATCAAGAACAGAGCATGAAGTCCAAGTGTaGGTTATTCTCAGCGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPGRGSMNKAVHSSSRTEHEVQV*VILSAV Trigger: GACAGCGCTGAGAATAACGCACACTTGGACTTCATG...CTCTGTTCTTGATGAGGAATGTACTGCTTTGTTCATGCTGCCCCTACCAGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | GATCCTCAAGGCCAGCCTCCTAACTGCTCAGCAAACAGATGTCAGCAAACGATGCATGAAGTCCAAGTGTaGGTTATTCTCAGCGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DPQGQPPNCSANRCQQTMHEVQV*VILSAV Trigger: GACAGCGCTGAGAATAACGCACACTTGGACTTCATG...CATCGTTTGCTGACATCTGTTTGCTGAGCAGTTAGGAGGCTGGCCTTGAGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| CDS-3UTR CCA 90 bp | GAACCCTTGTCTCTGTCCATCAGGACCACAAAGCACCAAGAAGCAGTGGTGATGAATGAGCAGTTCCTCTaGGTACAGCTCCTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EPLSLSIRTTKHQEAVVMNEQFL*VQLLTE Trigger: TTCTGTGAGGAGCTGTACCCAGAGGAACTGCTCATT...CATCACCACTGCTTCTTGGTGCTTTGTGGTCCTGATGGACAGAGACAAGGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR TCA 90 bp | CACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAAACACCAATGTTCCTTTaGCAGTGGATTTCATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: HSSLGPHQEDASHSEIPETPMFL*QWISWM Trigger: CATCCATGAAATCCACTGTCAAAGGAACATTGGTGT...TTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCACACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCAAGATTATTTTGAACTaGAAACTGGGCTGCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: AAHSSLGPHQEDASHSEIKIILN*KLGCHA Trigger: AGCATGGCAGCCCAGTTTCCAGTTCAAAATAATCTT...GATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTGTGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CCA 90 bp | GTGGTGATGACATCACTAAGGATGGAGCCCTTATGGGCCAGGAGGGCCACAGACGGGCGCAAAGTTTTCTaGATAGAGATTTTGAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVMTSLRMEPLWARRATDGRKVF*IEILNR Trigger: TCTATTCAAAATCTCTATCCAGAAAACTTTGCGCCC...GTCTGTGGCCCTCCTGGCCCATAAGGGCTCCATCCTTAGTGATGTCATCACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR GCA 90 bp | CCAAACACACACAGCACAATCGCAAAGACACAAAATGGCCATAACCTAGGAAAAACCTCCTCTTCCAGCTaGACCCCACAGAACTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PNTHSTIAKTQNGHNLGKTSSSS*TPQNSQ Trigger: CTGTGAGTTCTGTGGGGTGCAGCTGGAAGAGGAGGT...TTTTCCTAGGTTATGGCCATTTTGTGTCTTTGCGATTGTGCTGTGTGTGTTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR TCA 90 bp | GAACCCTTGTCTCTGTCCATCAGGACCACAAAGCACCAAGAAGCAGTGGTGATGTCAAAAAGATTATTTTaGACTGGAAACTGGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EPLSLSIRTTKHQEAVVMSKRLF*TGNWAA Trigger: GGCAGCCCAGTTTCCAGTTCAAAATAATCTTTTTGA...CATCACCACTGCTTCTTGGTGCTTTGTGGTCCTGATGGACAGAGACAAGGGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CCA 90 bp | GATCCCAGAACCCTTGTCTCTGTCCATCAGGACCACAAAGCACCAAGAAGCAGTTGTTGTAGAAAGTTCTaGAAGATGGTACCAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: DPRTLVSVHQDHKAPRSSCCRKF*KMVPGS Trigger: AGATCCTGGTACCATCTTCCAGAACTTTCTACAACA...ACTGCTTCTTGGTGCTTTGTGGTCCTGATGGACAGAGACAAGGGTTCTGGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR GCA 90 bp | CCAAACACACACAGCACAATCGCAAAGACACAAAATGGCCATAACCTAGGAAAACACCTGACAGTGCTCTaGAGCCATGTGAATGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PNTHSTIAKTQNGHNLGKHLTVL*SHVNVH Trigger: ATGGACATTCACATGGCTGCAGAGCACTGTCAGGTG...TTTTCCTAGGTTATGGCCATTTTGTGTCTTTGCGATTGTGCTGTGTGTGTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| 3UTR CAA 72 bp | AACAGATGTCAGCAAACGATGAAAAGCCGTTTGCACTaGGCTTTGTGGTGTGAAGTTTCAGAAACACGCACC | + |
|
Preference number: 4 (lower is better) Translates to: NRCQQTMKSRLH*ALWCEVSETRT Trigger: GGTGCGTGTTTCTGAAACTTCACACCACAAAGCCAAGTGCAAACGGCTTTTCATCGTTTGCTGACATCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| CDS-3UTR TCA 90 bp | CCAAACACACACAGCACAATCGCAAAGACACAAAATGGCCATAACCTAGGAAAATTGTCTGATGGTCAATaGGCAGTTCCTCTGGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PNTHSTIAKTQNGHNLGKLSDGQ*AVPLGT Trigger: TGTACCCAGAGGAACTGCTCATTGACCATCAGACAA...TTTTCCTAGGTTATGGCCATTTTGTGTCTTTGCGATTGTGCTGTGTGTGTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | CCAAACACACACAGCACAATCGCAAAGACACAAAATGGCCATAACCTAGGAAAATGTCCATGTCAGATTTaGGGAACGGTTCCTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PNTHSTIAKTQNGHNLGKCPCQI*GTVPCR Trigger: TCTGCAAGGAACCGTTCCCCAAATCTGACATGGACA...TTTTCCTAGGTTATGGCCATTTTGTGTCTTTGCGATTGTGCTGTGTGTGTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | CCAAACACACACAGCACAATCGCAAAGACACAAAATGGCCATAACCTAGGAAAAATTTGTCTGAGGAGCTaGGATGCGATCCAGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PNTHSTIAKTQNGHNLGKICLRS*DAIQIL Trigger: CAGAATCTGGATCGCATCCCAGCTCCTCAGACAAAT...TTTTCCTAGGTTATGGCCATTTTGTGTCTTTGCGATTGTGCTGTGTGTGTTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | CCAAACACACACAGCACAATCGCAAAGACACAAAATGGCCATAACCTAGGAAAAGCATGCTGCTTTAACTaGCTCTTCTCCAACTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PNTHSTIAKTQNGHNLGKACCFN*LFSNFL Trigger: CAAGAAGTTGGAGAAGAGGCAGTTAAAGCAGCATGC...TTTTCCTAGGTTATGGCCATTTTGTGTCTTTGCGATTGTGCTGTGTGTGTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGCAGGATATGTCCTGTCACCCAAAGCAGAGACTACATGGCACCTTTAGATAAGATTATTTTGAACTaGAAACTGGGCTGCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSRICPVTQSRDYMAPLDKIILN*KLGCHA Trigger: AGCATGGCAGCCCAGTTTCCAGTTCAAAATAATCTT...ATCTAAAGGTGCCATGTAGTCTCTGCTTTGGGTGACAGGACATATCCTGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| 3UTR CAA 72 bp | TCAGCAAACAGATGTCAGCAAACGATGAAAAGCCGTTaGCACTTGGCTTTGTGGTGTGAAGTTTCAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SANRCQQTMKSR*HLALWCEVSET Trigger: TGTTTCTGAAACTTCACACCACAAAGCCAAGTGCAAACGGCTTTTCATCGTTTGCTGACATCTGTTTGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| CDS-3UTR GCA 90 bp | CCAAACACACACAGCACAATCGCAAAGACACAAAATGGCCATAACCTAGGAAAATCTCCAACTTCTTGTTaGATTTACAGGTCACCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PNTHSTIAKTQNGHNLGKSPTSC*IYRSPD Trigger: GTCAGGTGACCTGTAAATGCAACAAGAAGTTGGAGA...TTTTCCTAGGTTATGGCCATTTTGTGTCTTTGCGATTGTGCTGTGTGTGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CCA 90 bp | CCAAACACACACAGCACAATCGCAAAGACACAAAATGGCCATAACCTAGGAAAAGGGCGCAAAGTTTTCTaGATAGAGATTTTGAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: PNTHSTIAKTQNGHNLGKGRKVF*IEILNR Trigger: TCTATTCAAAATCTCTATCCAGAAAACTTTGCGCCC...TTTTCCTAGGTTATGGCCATTTTGTGTCTTTGCGATTGTGCTGTGTGTGTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS GCA 90 bp | GGCTGCCATGCTCCTCTGGCTGGTAGTCCTACTGTAGAAGGGGTCTaGCTCAAAGGCTTGCAGGGGCCTTCCAGGGAGCCTCATGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GCHAPLAGSPTVEGV*LKGLQGPSREPHGR Trigger: CCGCCCATGAGGCTCCCTGGAAGGCCCCTGCAAGCCTTTGAGGCAGACCCCTTCTACAGTAGGACTACCAGCCAGAGGAGCATGGCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS TCA 90 bp | GCCTTCCAGGGAGCCTCATGGGCGGGTCCAGAGCCTCGATTTGTCTaGGGAGCTGGGATGCGATCCAGATTCTGTCCTGACTCCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AFQGASWAGPEPRFV*GAGMRSRFCPDSRA Trigger: AGCCCTGGAGTCAGGACAGAATCTGGATCGCATCCCAGCTCCTCAGACAAATCGAGGCTCTGGACCCGCCCATGAGGCTCCCTGGAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS GCA 90 bp | CCAGCACGAGCCGGATCAGCCTCAGGCACAGACTCCCAGAAGCCCTaGTCTACCATGCTGGTGGCCTGTCCCTCATTCTGCAGACTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PARAGSASGTDSQKP*STMLVACPSFCRLK Trigger: CTTGAGTCTGCAGAATGAGGGACAGGCCACCAGCATGGTAGAGCAGGGCTTCTGGGAGTCTGTGCCTGAGGCTGATCCGGCTCGTGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CAA 90 bp | TCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCTCGGGCCTCCCAGCTAGCGTCTGCCTCAAAGGCTaGCAGGGGCCTTCCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SALISRLLNNGSSGLPASVCLKG*QGPSRE Trigger: CTCCCTGGAAGGCCCCTGCAAGCCTTTGAGGCAGAC...GCTAGCTGGGAGGCCCGAGCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CAA 90 bp | TGGTGTCTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCAGCATGTCTGCCTCAAAGGCTaGCAGGGGCCTTCCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WCLSCPVSPRGSWTLHQHVCLKG*QGPSRE Trigger: CTCCCTGGAAGGCCCCTGCAAGCCTTTGAGGCAGAC...ATGCTGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAGACACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
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| CDS-3UTR CAA 90 bp | CTGGACAGCTCTGCTGAAGTGTTTTCTGGCTGCGAATCCTGGGCTGGGATGCCCGTCTGCCTCAAAGGCTaGCAGGGGCCTTCCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LDSSAEVFSGCESWAGMPVCLKG*QGPSRE Trigger: CTCCCTGGAAGGCCCCTGCAAGCCTTTGAGGCAGAC...GGGCATCCCAGCCCAGGATTCGCAGCCAGAAAACACTTCAGCAGAGCTGTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| CDS-3UTR CAA 90 bp | TCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCTCGGGCCTCCCAGCTAGCAGGTCTCCCTGGTGTTaGACCCGCCTCCTGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SALISRLLNNGSSGLPASRSPWC*TRLLDS Trigger: GCTGTCCAGGAGGCGGGTCAAACACCAGGGAGACCT...GCTAGCTGGGAGGCCCGAGCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
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| CDS-3UTR CAA 90 bp | AATGGCAGCTCGGGCCTCCCAGCTAGCCCTCCCTCAAACCCAAACACACACAGCCTGCTCCCTGCTGCTTaGGAGGCTTGGCCTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NGSSGLPASPPSNPNTHSLLPAA*EAWPLL Trigger: CAGCAAAGGCCAAGCCTCCAAAGCAGCAGGGAGCAG...GCTGTGTGTGTTTGGGTTTGAGGGAGGGCTAGCTGGGAGGCCCGAGCTGCCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
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| CDS GCA 90 bp | CGGGGTGAGTCTTCAGCTCCTTCACAAGCACGTTGCGCCCACAGCTaGCACACAGCTCTGTCCGGGCTCCACAGTAATCCTCATGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RGESSAPSQARCAHS*HTALSGLHSNPHAP Trigger: AGGAGCATGAGGATTACTGTGGAGCCCGGACAGAGCTGTGTGGCAGCTGTGGGCGCAACGTGCTTGTGAAGGAGCTGAAGACTCACCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000152265.8 |
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| CDS GCA 90 bp | CCTCATGGGCGGGTCCAGAGCCTCGATTTGTCTGAGGAGCTGGGATaGGATCCAGATTCTGTCCTGACTCCAGGGCTCGTCGTAAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PHGRVQSLDLSEELG*DPDSVLTPGLVVSL Trigger: GAGGCTTACGACGAGCCCTGGAGTCAGGACAGAATCTGGATCGCATCCCAGCTCCTCAGACAAATCGAGGCTCTGGACCCGCCCATGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
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| CDS-3UTR CAA 90 bp | CTTATGGGCCAGGAGGGCCACAGACACTCAGCGCTGATTTCAAGGCTGCTCAACAGGTCTCCCTGGTGTTaGACCCGCCTCCTGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LMGQEGHRHSALISRLLNRSPWC*TRLLDS Trigger: GCTGTCCAGGAGGCGGGTCAAACACCAGGGAGACCT...GTTGAGCAGCCTTGAAATCAGCGCTGAGTGTCTGTGGCCCTCCTGGCCCATAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
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| CDS-3UTR CAA 90 bp | ACACTCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCTCGGGCCTCCCAGCCTGCTCCCTGCTGCTTaGGAGGCTTGGCCTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TLSADFKAAQQWQLGPPSLLPAA*EAWPLL Trigger: CAGCAAAGGCCAAGCCTCCAAAGCAGCAGGGAGCAG...GCTGGGAGGCCCGAGCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGAGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
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| CDS TCA 90 bp | GCCTCCGTTCTCTTTTCCTCCTCCACTCTCCCACAGACTTCGGGGTaGGTCTTCAGCTCCTTCACAAGCACGTTGCGCCCACAGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASVLFSSSTLPQTSG*VFSSFTSTLRPQLP Trigger: TGGCAGCTGTGGGCGCAACGTGCTTGTGAAGGAGCTGAAGACTCACCCCGAAGTCTGTGGGAGAGTGGAGGAGGAAAAGAGAACGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000152265.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CAA 90 bp | AATCTGGTGTCTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCATCTCAGCGCTGTCCTTaGGGGACTGCCGGCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NLVSLLPSKPERQLDIAPSQRCP*GTAGFC Trigger: ACAGAAGCCGGCAGTCCCCAAAGGACAGCGCTGAGA...TGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAGACACCAGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CAA 90 bp | TCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCTCGGGCCTCCCAGCTAGCTTGGAGGCTTGGCCTTaGCTGCTCTGCTGTGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SALISRLLNNGSSGLPASLEAWP*LLCCGS Trigger: GCTACCACAGCAGAGCAGCAAAGGCCAAGCCTCCAA...GCTAGCTGGGAGGCCCGAGCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR CAA 90 bp | ACACTCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCTCGGGCCTCCCAGCTTGGAGGCTTGGCCTTaGCTGCTCTGCTGTGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLSADFKAAQQWQLGPPSLEAWP*LLCCGS Trigger: GCTACCACAGCAGAGCAGCAAAGGCCAAGCCTCCAA...GCTGGGAGGCCCGAGCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
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| CDS GCA 90 bp | TCCTCATGCTCCTTCAACTTGACAACAGAAAGCTCCAGATCACAGTaGTGGCAGACGGCGAGCCGCAGGGGACACTCTGTCTCCGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SSCSFNLTTESSRSQ*WQTASRRGHSVSAC Trigger: GCATGCGGAGACAGAGTGTCCCCTGCGGCTCGCCGTCTGCCAGCACTGTGATCTGGAGCTTTCTGTTGTCAAGTTGAAGGAGCATGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000152265.8 |
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| CDS CCA 90 bp | TCATGCTCCTTCAACTTGACAACAGAAAGCTCCAGATCACAGTGCTaGCAGACGGCGAGCCGCAGGGGACACTCTGTCTCCGCATGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCSFNLTTESSRSQC*QTASRRGHSVSACC Trigger: GCAGCATGCGGAGACAGAGTGTCCCCTGCGGCTCGCCGTCTGCCAGCACTGTGATCTGGAGCTTTCTGTTGTCAAGTTGAAGGAGCATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000152265.8 |
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| CDS CCA 90 bp | AGATTCTGTCCTGACTCCAGGGCTCGTCGTAAGCCTCCGGAGGGATaGCAGCCTCCGTTCTCTTTTCCTCCTCCACTCTCCCACAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: RFCPDSRARRKPPEG*QPPFSFPPPLSHRL Trigger: AAGTCTGTGGGAGAGTGGAGGAGGAAAAGAGAACGGAGGCTGCCATCCCTCCGGAGGCTTACGACGAGCCCTGGAGTCAGGACAGAATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000152265.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CAA 90 bp | ATACCCTGGTGTTTGACCCGCCTCCTGGACAGCTCTGCTGAAGTGTTTTCTGGCTCTCAGCGCTGTCCTTaGGGGACTGCCGGCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IPWCLTRLLDSSAEVFSGSQRCP*GTAGFC Trigger: ACAGAAGCCGGCAGTCCCCAAAGGACAGCGCTGAGA...GCCAGAAAACACTTCAGCAGAGCTGTCCAGGAGGCGGGTCAAACACCAGGGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| CDS-3UTR CAA 90 bp | GCTGCACACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCTGCTGTGGCTGGGCGTaGGTCACACTGGTCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: AAHSSLGPHQEDASHSEICCGWA*VTLVLM Trigger: CATCAGGACCAGTGTGACCAACGCCCAGCCACAGCA...GATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTGTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | TTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAACCCTTGTCTCCACTGCACGGTGGTTaGCTGTGGCTGGGCGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LGPHQEDASHSEIPEPLSPLHGG*LWLGVG Trigger: ACCAACGCCCAGCCACAGCAAACCACCGTGCAGTGG...AGACAAGGGTTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | AATCTGGTGTCTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCATGCTGCTTTGGAGGCTaGGCCTTTGCTGCTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NLVSLLPSKPERQLDIAPCCFGG*AFAALL Trigger: CAGCAGAGCAGCAAAGGCCAAGCCTCCAAAGCAGCA...TGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAGACACCAGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR CAA 90 bp | GTGGTGATGACATCACTAAGGATGGAGCCCTTATGGGCCAGGAGGGCCACAGACTGCTGCTTTGGAGGCTaGGCCTTTGCTGCTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VVMTSLRMEPLWARRATDCCFGG*AFAALL Trigger: CAGCAGAGCAGCAAAGGCCAAGCCTCCAAAGCAGCA...GTCTGTGGCCCTCCTGGCCCATAAGGGCTCCATCCTTAGTGATGTCATCACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS-3UTR CAA 90 bp | TTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAACCCTTGTCTTCTCAGCGCTGTCCTTaGGGGACTGCCGGCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LGPHQEDASHSEIPEPLSSQRCP*GTAGFC Trigger: ACAGAAGCCGGCAGTCCCCAAAGGACAGCGCTGAGA...AGACAAGGGTTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CAA 90 bp | GATCCCAGAACCCTTGTCTCTGTCCATCAGGACCACAAAGCACCAAGAAGCAGTCCACTGCACGGTGGTTaGCTGTGGCTGGGCGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: DPRTLVSVHQDHKAPRSSPLHGG*LWLGVG Trigger: ACCAACGCCCAGCCACAGCAAACCACCGTGCAGTGG...ACTGCTTCTTGGTGCTTTGTGGTCCTGATGGACAGAGACAAGGGTTCTGGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCAGCATGTTCTGATGTCCATGTCAGATTaGGGGAACGGTTCCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSCPVSPRGSWTLHQHVLMSMSD*GNGSLQ Trigger: CTGCAAGGAACCGTTCCCCAAATCTGACATGGACAT...CAGAACATGCTGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | ACACTCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCTCGGGCCTCCCAGCTCCTGGCTATCAGAGTaGTTGAGTTTCAGCACACCG | + |
|
Preference number: 5 (lower is better) Translates to: TLSADFKAAQQWQLGPPSSWLSE*LSFSTP Trigger: CGGTGTGCTGAAACTCAACAACTCTGATAGCCAGGA...GCTGGGAGGCCCGAGCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCTGGTAGGGGCAGCATGAACAAAGCAGTACATTCCTCATCAAGAACAGAGCTGCTCCCTGCTGCTTaGGAGGCTTGGCCTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPGRGSMNKAVHSSSRTELLPAA*EAWPLL Trigger: CAGCAAAGGCCAAGCCTCCAAAGCAGCAGGGAGCAG...CTCTGTTCTTGATGAGGAATGTACTGCTTTGTTCATGCTGCCCCTACCAGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS TCA 90 bp | CCATGCTGGTGGCCTGTCCCTCATTCTGCAGACTCAAGGCCAACATaGAGTCCAAGTGTGCGTTATTCTCAGCGCTGTCCTTTGGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: PCWWPVPHSADSRPT*SPSVRYSQRCPLGT Trigger: AGTCCCCAAAGGACAGCGCTGAGAATAACGCACACTTGGACTTCATGTTGGCCTTGAGTCTGCAGAATGAGGGACAGGCCACCAGCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CAA 90 bp | GAACCCTTGTCTCTGTCCATCAGGACCACAAAGCACCAAGAAGCAGTGGTGATGTTGGAGGCTTGGCCTTaGCTGCTCTGCTGTGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: EPLSLSIRTTKHQEAVVMLEAWP*LLCCGS Trigger: GCTACCACAGCAGAGCAGCAAAGGCCAAGCCTCCAA...CATCACCACTGCTTCTTGGTGCTTTGTGGTCCTGATGGACAGAGACAAGGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000202064.2 |
||
| CDS GCA 90 bp | CTGTCCCTCATTCTGCAGACTCAAGGCCAACATGAAGTCCAAGTGTaGGTTATTCTCAGCGCTGTCCTTTGGGGACTGCCGGCTTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSLILQTQGQHEVQV*VILSAVLWGLPASV Trigger: AACAGAAGCCGGCAGTCCCCAAAGGACAGCGCTGAGAATAACGCACACTTGGACTTCATGTTGGCCTTGAGTCTGCAGAATGAGGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS GCA 90 bp | TCCCAGAAGCCCTGCTCTACCATGCTGGTGGCCTGTCCCTCATTCTaGAGACTCAAGGCCAACATGAAGTCCAAGTGTGCGTTATTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQKPCSTMLVACPSF*RLKANMKSKCALFS Trigger: TGAGAATAACGCACACTTGGACTTCATGTTGGCCTTGAGTCTGCAGAATGAGGGACAGGCCACCAGCATGGTAGAGCAGGGCTTCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CAA 90 bp | ATCAAGAACAGAGAGAGGTGGGTGAGTGACCCGCAAGGACGAAGGTGGCCTCCAATTTCCTTCTTGCAGTaGTCACACAGCCTAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IKNRERWVSDPQGRRWPPISFLQ*SHSLEA Trigger: GGCTTCTAGGCTGTGTGACAACTGCAAGAAGGAAAT...TGGAGGCCACCTTCGTCCTTGCGGGTCACTCACCCACCTCTCTCTGTTCTTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCACACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCTCCTGGCTATCAGAGTaGTTGAGTTTCAGCACACCG | + |
|
Preference number: 5 (lower is better) Translates to: AAHSSLGPHQEDASHSEISWLSE*LSFSTP Trigger: CGGTGTGCTGAAACTCAACAACTCTGATAGCCAGGA...GATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTGTGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | ATCAAGAACAGAGAGAGGTGGGTGAGTGACCCGCAAGGACGAAGGTGGCCTCCACTCTTCTCCAACTTCTaGTTGCATTTACAGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: IKNRERWVSDPQGRRWPPLFSNF*LHLQVT Trigger: GGTGACCTGTAAATGCAACAAGAAGTTGGAGAAGAG...TGGAGGCCACCTTCGTCCTTGCGGGTCACTCACCCACCTCTCTCTGTTCTTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS CCA 90 bp | TCACCTGACAGTGCTCTGCAGCCATGTGAATGTCCATGTCAGATTTaGGGAACGGTTCCTTGCAGACAGGGCACACACCAATGTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SPDSALQPCECPCQI*GTVPCRQGTHQCSF Trigger: AAAGGAACATTGGTGTGTGCCCTGTCTGCAAGGAACCGTTCCCCAAATCTGACATGGACATTCACATGGCTGCAGAGCACTGTCAGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000152265.8 ENSMUST00000155379.8 |
||
| CDS-3UTR CAA 90 bp | CACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAAATTTCCTTCTTGCAGTaGTCACACAGCCTAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSSLGPHQEDASHSEIPEISFLQ*SHSLEA Trigger: GGCTTCTAGGCTGTGTGACAACTGCAAGAAGGAAAT...TTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | ATCAAGAACAGAGAGAGGTGGGTGAGTGACCCGCAAGGACGAAGGTGGCCTCCACACACCAATGTTCCTTaGACAGTGGATTTCATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: IKNRERWVSDPQGRRWPPHTNVP*TVDFMD Trigger: ATCCATGAAATCCACTGTCAAAGGAACATTGGTGTG...TGGAGGCCACCTTCGTCCTTGCGGGTCACTCACCCACCTCTCTCTGTTCTTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCACACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCTCATGCTCCTTCAACTaGACAACAGAAAGCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AAHSSLGPHQEDASHSEISCSFN*TTESSR Trigger: TCTGGAGCTTTCTGTTGTCAAGTTGAAGGAGCATGA...GATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTGTGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCACACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCACACCAATGTTCCTTaGACAGTGGATTTCATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AAHSSLGPHQEDASHSEIHTNVP*TVDFMD Trigger: ATCCATGAAATCCACTGTCAAAGGAACATTGGTGTG...GATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTGTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | CACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAACTCTTCTCCAACTTCTaGTTGCATTTACAGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: HSSLGPHQEDASHSEIPELFSNF*LHLQVT Trigger: GGTGACCTGTAAATGCAACAAGAAGTTGGAGAAGAG...TTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | CCAAACACACACAGCACAATCGCAAAGACACAAAATGGCCATAACCTAGGAAAATGCTGTGGCTGGGCGTaGGTCACACTGGTCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PNTHSTIAKTQNGHNLGKCCGWA*VTLVLM Trigger: CATCAGGACCAGTGTGACCAACGCCCAGCCACAGCA...TTTTCCTAGGTTATGGCCATTTTGTGTCTTTGCGATTGTGCTGTGTGTGTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCTGGTAGGGGCAGCATGAACAAAGCAGTACATTCCTCATCAAGAACAGAGTCATGCTCCTTCAACTaGACAACAGAAAGCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GPGRGSMNKAVHSSSRTESCSFN*TTESSR Trigger: TCTGGAGCTTTCTGTTGTCAAGTTGAAGGAGCATGA...CTCTGTTCTTGATGAGGAATGTACTGCTTTGTTCATGCTGCCCCTACCAGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | AATCTGGTGTCTCTCCTGCCCAGTAAGCCCGAGAGGCAGCTGGACATTGCACCATTCAAAAAGATTATTTaGAACTGGAAACTGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NLVSLLPSKPERQLDIAPFKKII*NWKLGC Trigger: GCAGCCCAGTTTCCAGTTCAAAATAATCTTTTTGAA...TGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGAGACACCAGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CAA 90 bp | ATCAAGAACAGAGAGAGGTGGGTGAGTGACCCGCAAGGACGAAGGTGGCCTCCATTCAAAAAGATTATTTaGAACTGGAAACTGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IKNRERWVSDPQGRRWPPFKKII*NWKLGC Trigger: GCAGCCCAGTTTCCAGTTCAAAATAATCTTTTTGAA...TGGAGGCCACCTTCGTCCTTGCGGGTCACTCACCCACCTCTCTCTGTTCTTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS-3UTR CAA 90 bp | CAGGAGGGCCACAGACACTCAGCGCTGATTTCAAGGCTGCTCAACAATGGCAGCCAAACTGGTTACTTGTaGCTTGTTGTAGAAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QEGHRHSALISRLLNNGSQTGYL*LVVESS Trigger: AGAACTTTCTACAACAAGCAACAAGTAACCAGTTTG...GCTGCCATTGTTGAGCAGCCTTGAAATCAGCGCTGAGTGTCTGTGGCCCTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCACACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCTGTCAAACTGGTTACTaGTTGCTTGTTGTAGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AAHSSLGPHQEDASHSEICQTGY*LLVVES Trigger: ACTTTCTACAACAAGCAACAAGTAACCAGTTTGACA...GATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTGTGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | CACTCAAGCTTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAATTCTGGATAGAGATTTaGAATAGAGTGGATCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: HSSLGPHQEDASHSEIPEFWIEI*NRVDHW Trigger: CCAGTGATCCACTCTATTCAAAATCTCTATCCAGAA...TTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAAGCTTGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | TTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAACCCTTGTCTCAAACTGGTTACTTGTaGCTTGTTGTAGAAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGPHQEDASHSEIPEPLSQTGYL*LVVESS Trigger: AGAACTTTCTACAACAAGCAACAAGTAACCAGTTTG...AGACAAGGGTTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | TTAGGTCCCCACCAGGAGGATGCTTCTCACTCTGAGATCCCAGAACCCTTGTCTTGTCAAACTGGTTACTaGTTGCTTGTTGTAGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LGPHQEDASHSEIPEPLSCQTGY*LLVVES Trigger: ACTTTCTACAACAAGCAACAAGTAACCAGTTTGACA...AGACAAGGGTTCTGGGATCTCAGAGTGAGAAGCATCCTCCTGGTGGGGACCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCTGGTAGGGGCAGCATGAACAAAGCAGTACATTCCTCATCAAGAACAGAGTTCTGGATAGAGATTTaGAATAGAGTGGATCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGRGSMNKAVHSSSRTEFWIEI*NRVDHW Trigger: CCAGTGATCCACTCTATTCAAAATCTCTATCCAGAA...CTCTGTTCTTGATGAGGAATGTACTGCTTTGTTCATGCTGCCCCTACCAGGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS TCA 90 bp | TTGGGGAACGGTTCCTTGCAGACAGGGCACACACCAATGTTCCTTTaGCAGTGGATTTCATGGATGGTAAAATTAAATACAGGAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGNGSLQTGHTPMFL*QWISWMVKLNTGIS Trigger: GGAAATTCCTGTATTTAATTTTACCATCCATGAAATCCACTGTCAAAGGAACATTGGTGTGTGCCCTGTCTGCAAGGAACCGTTCCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000152265.8 ENSMUST00000155379.8 |
||
| CDS-3UTR CAA 90 bp | CCAAACACACACAGCACAATCGCAAAGACACAAAATGGCCATAACCTAGGAAAATTCAAAAAGATTATTTaGAACTGGAAACTGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PNTHSTIAKTQNGHNLGKFKKII*NWKLGC Trigger: GCAGCCCAGTTTCCAGTTCAAAATAATCTTTTTGAA...TTTTCCTAGGTTATGGCCATTTTGTGTCTTTGCGATTGTGCTGTGTGTGTTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS GCA 72 bp | GCCGGATCAGCCTCAGGCACAGACTCCCAGAAGCCCTaGTCTACCATGCTGGTGGCCTGTCCCTCATTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AGSASGTDSQKP*STMLVACPSFC Trigger: GCAGAATGAGGGACAGGCCACCAGCATGGTAGAGCAGGGCTTCTGGGAGTCTGTGCCTGAGGCTGATCCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS GCA 72 bp | GCTCCTCTGGCTGGTAGTCCTACTGTAGAAGGGGTCTaGCTCAAAGGCTTGCAGGGGCCTTCCAGGGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: APLAGSPTVEGV*LKGLQGPSREP Trigger: AGGCTCCCTGGAAGGCCCCTGCAAGCCTTTGAGGCAGACCCCTTCTACAGTAGGACTACCAGCCAGAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS TCA 72 bp | GGAGCCTCATGGGCGGGTCCAGAGCCTCGATTTGTCTaGGGAGCTGGGATGCGATCCAGATTCTGTCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: GASWAGPEPRFV*GAGMRSRFCPD Trigger: GTCAGGACAGAATCTGGATCGCATCCCAGCTCCTCAGACAAATCGAGGCTCTGGACCCGCCCATGAGGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS CCA 72 bp | CAGGCACAGACTCCCAGAAGCCCTGCTCTACCATGCTaGTGGCCTGTCCCTCATTCTGCAGACTCAAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QAQTPRSPALPC*WPVPHSADSRP Trigger: TGGCCTTGAGTCTGCAGAATGAGGGACAGGCCACCAGCATGGTAGAGCAGGGCTTCTGGGAGTCTGTGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS CAA 72 bp | TCCAGGGAGCCTCATGGGCGGGTCCAGAGCCTCGATTaGTCTGAGGAGCTGGGATGCGATCCAGATTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SREPHGRVQSLD*SEELGCDPDSV Trigger: GACAGAATCTGGATCGCATCCCAGCTCCTCAGACAAATCGAGGCTCTGGACCCGCCCATGAGGCTCCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS GCA 72 bp | TCTTCAGCTCCTTCACAAGCACGTTGCGCCCACAGCTaGCACACAGCTCTGTCCGGGCTCCACAGTAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSAPSQARCAHS*HTALSGLHSNP Trigger: AGGATTACTGTGGAGCCCGGACAGAGCTGTGTGGCAGCTGTGGGCGCAACGTGCTTGTGAAGGAGCTGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000152265.8 ENSMUST00000156158.6 |
||
| CDS CCA 72 bp | GCACAGACTCCCAGAAGCCCTGCTCTACCATGCTGGTaGCCTGTCCCTCATTCTGCAGACTCAAGGCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: AQTPRSPALPCW*PVPHSADSRPT Trigger: TGTTGGCCTTGAGTCTGCAGAATGAGGGACAGGCCACCAGCATGGTAGAGCAGGGCTTCTGGGAGTCTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS GCA 72 bp | CAGACGGCGAGCCGCAGGGGACACTCTGTCTCCGCATaGTGCTTTAACTGCCTCTTCTCCAACTTCTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QTASRRGHSVSA*CFNCLFSNFLL Trigger: CAACAAGAAGTTGGAGAAGAGGCAGTTAAAGCAGCATGCGGAGACAGAGTGTCCCCTGCGGCTCGCCGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000152265.8 |
||
| CDS GCA 72 bp | TCCTTCAACTTGACAACAGAAAGCTCCAGATCACAGTaGTGGCAGACGGCGAGCCGCAGGGGACACTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SFNLTTESSRSQ*WQTASRRGHSV Trigger: GACAGAGTGTCCCCTGCGGCTCGCCGTCTGCCAGCACTGTGATCTGGAGCTTTCTGTTGTCAAGTTGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000152265.8 |
||
| CDS GCA 72 bp | CCCTGCTCTACCATGCTGGTGGCCTGTCCCTCATTCTaGAGACTCAAGGCCAACATGAAGTCCAAGTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PCSTMLVACPSF*RLKANMKSKCA Trigger: CGCACACTTGGACTTCATGTTGGCCTTGAGTCTGCAGAATGAGGGACAGGCCACCAGCATGGTAGAGCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS TCA 72 bp | CACGATCCTGTCTGGCGTTGTCGAGTACCACACACCTaGTGGTCAATGAGCAGTTCCTCTGGGTACAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HDPVWRCRVPHT*WSMSSSSGYSS Trigger: GGAGCTGTACCCAGAGGAACTGCTCATTGACCATCAGGTGTGTGGTACTCGACAACGCCAGACAGGATCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
||
| CDS CAA 90 bp | CCTTCACTCCTCCCACTGGGCCCTGACGGTAAGTTCAACAGTCGGTaGCAGGAAGCCACATTGTTCATGGTCCTGTTAGGAGACATCGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSLLPLGPDGKFNSR*QEATLFMVLLGDIE Trigger: CTCGATGTCTCCTAACAGGACCATGAACAATGTGGCTTCCTGCAACCGACTGTTGAACTTACCGTCAGGGCCCAGTGGGAGGAGTGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202064.2 |
||
| CDS CAA 72 bp | CTCCCACTGGGCCCTGACGGTAAGTTCAACAGTCGGTaGCAGGAAGCCACATTGTTCATGGTCCTGTTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LPLGPDGKFNSR*QEATLFMVLLG Trigger: TCCTAACAGGACCATGAACAATGTGGCTTCCTGCAACCGACTGTTGAACTTACCGTCAGGGCCCAGTGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202064.2 |
||
| CDS TCA 72 bp | TGGCCTGTCCCTCATTCTGCAGACTCAAGGCCAACATaGAGTCCAAGTGTGCGTTATTCTCAGCGCTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WPVPHSADSRPT*SPSVRYSQRCP Trigger: AGGACAGCGCTGAGAATAACGCACACTTGGACTTCATGTTGGCCTTGAGTCTGCAGAATGAGGGACAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
||
| CDS TCA 72 bp | CATCCATGTAACCAGATGACAGGTCTCCCTGGTGTTTaGCCCGCCTCCTGGACAGCTCTGCTGAAGTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: HPCNQMTGLPGV*PASWTALLKCF Trigger: AAAACACTTCAGCAGAGCTGTCCAGGAGGCGGGTCAAACACCAGGGAGACCTGTCATCTGGTTACATGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
||
| CDS TCA 72 bp | TCTGGCGTTGTCGAGTACCACACACCTGATGGTCAATaGGCAGTTCCTCTGGGTACAGCTCCTCACAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: SGVVEYHTPDGQ*AVPLGTAPHRT Trigger: AGTTCTGTGAGGAGCTGTACCCAGAGGAACTGCTCATTGACCATCAGGTGTGTGGTACTCGACAACGCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156158.6 |
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| CDS CCA 72 bp | AGTGCTCTGCAGCCATGTGAATGTCCATGTCAGATTTaGGGAACGGTTCCTTGCAGACAGGGCACACACCAA | + |
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Preference number: 6 (lower is better) Translates to: SALQPCECPCQI*GTVPCRQGTHQ Trigger: TTGGTGTGTGCCCTGTCTGCAAGGAACCGTTCCCCAAATCTGACATGGACATTCACATGGCTGCAGAGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000152265.8 ENSMUST00000155379.8 |
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| CDS TCA 72 bp | ACATCGAGTAGGTGGGGCCTTTCACTGATTCCGGCTTaGCATCATCCATGTAACCAGATGACAGGTCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: TSSRWGLSLIPA*HHPCNQMTGLP Trigger: AGGGAGACCTGTCATCTGGTTACATGGATGATGTCAAGCCGGAATCAGTGAAAGGCCCCACCTACTCGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 |
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| CDS GCA 72 bp | AAGTGTGCGTTATTCTCAGCGCTGTCCTTTGGGGACTaGCGGCTTCTGTTCCTTTCCTGCCTTTCTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: KCALFSALSFGD*RLLFLSCLSCS Trigger: AGAACAAGAAAGGCAGGAAAGGAACAGAAGCCGGCAGTCCCCAAAGGACAGCGCTGAGAATAACGCACACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
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| CDS GCA 72 bp | CATGCTGCTTTAACTGCCTCTTCTCCAACTTCTTGTTaGATTTACAGGTCACCTGACAGTGCTCTGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: HAALTASSPTSC*IYRSPDSALQP Trigger: TGGCTGCAGAGCACTGTCAGGTGACCTGTAAATGCAACAAGAAGTTGGAGAAGAGGCAGTTAAAGCAGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000152265.8 ENSMUST00000155379.8 |
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| CDS GCA 72 bp | CTTCTTGTTGCATTTACAGGTCACCTGACAGTGCTCTaGAGCCATGTGAATGTCCATGTCAGATTTGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LLVAFTGHLTVL*SHVNVHVRFGE Trigger: TTCCCCAAATCTGACATGGACATTCACATGGCTGCAGAGCACTGTCAGGTGACCTGTAAATGCAACAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000152265.8 ENSMUST00000155379.8 |
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| CDS GCA 72 bp | TTCTTCAAAAAGATTATTTTGAACTGGAAACTGGGCTaGCATGCTCCTCTGGCTGGTAGTCCTACTGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: FFKKIILNWKLG*HAPLAGSPTVE Trigger: TTCTACAGTAGGACTACCAGCCAGAGGAGCATGGCAGCCCAGTTTCCAGTTCAAAATAATCTTTTTGAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000156158.6 |
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| CDS CAA 90 bp | TTTGGGGAACGGTTCCTTGCAGACAGGGCACACACCAATGTTCCTTaGACAGTGGATTTCATGGATGGTAAAATTAAATACAGGAATTTC | + |
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Preference number: 6 (lower is better) Translates to: FGERFLADRAHTNVP*TVDFMDGKIKYRNF Trigger: GAAATTCCTGTATTTAATTTTACCATCCATGAAATCCACTGTCAAAGGAACATTGGTGTGTGCCCTGTCTGCAAGGAACCGTTCCCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042312.14 ENSMUST00000120784.8 ENSMUST00000152265.8 ENSMUST00000155379.8 |
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