Pregenerated sensors for TRAF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027164Ensembl transcript IDs: ENSMUST00000004949.8
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTGGCTGGCTACAGCTGAGAAACAGACTCCTTGGTGGAGGCTCTaGGCGTTCTCTGGGAACAGGGCAGGTCAGAGCACTGCTCGGGTC | + |
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Preference number: 1 (lower is better) Translates to: PWLATAEKQTPWWRL*AFSGNRAGQSTARV Trigger: GACCCGAGCAGTGCTCTGACCTGCCCTGTTCCCAGAGAACGCTCAGAGCCTCCACCAAGGAGTCTGTTTCTCAGCTGTAGCCAGCCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CCA 90 bp | GCAGGTGACCAACAGGCCACCCTTTTCTCCTGTGTCAGGCAGGGCTaGGCTCCGCTGAGGAGACACAGGACAGGAAAAGGAGTTCCTCTC | + |
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Preference number: 1 (lower is better) Translates to: AGDQQATLFSCVRQG*APLRRHRTGKGVPL Trigger: GAGAGGAACTCCTTTTCCTGTCCTGTGTCTCCTCAGCGGAGCCCAGCCCTGCCTGACACAGGAGAAAAGGGTGGCCTGTTGGTCACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR GCA 90 bp | GCACTGGTGTTTTGCCTGCATGAGTGTCTGTATGAGGGTGTCAGATaGCCTGGAACTGGAGTTACAGACTGGGGATCCTCTGGAAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: ALVFCLHECLYEGVR*PGTGVTDWGSSGRA Trigger: TGCTCTTCCAGAGGATCCCCAGTCTGTAACTCCAGTTCCAGGGCATCTGACACCCTCATACAGACACTCATGCAGGCAAAACACCAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR GCA 90 bp | AAACAACTACAGTATAAGACCATGCAGTGCTCCTTAGGCAGAAGTTaGTACAAGCAGCTCAGGGCTGCTGGAGGCACAGCTAAGGGACAC | + |
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Preference number: 1 (lower is better) Translates to: KQLQYKTMQCSLGRS*YKQLRAAGGTAKGH Trigger: GTGTCCCTTAGCTGTGCCTCCAGCAGCCCTGAGCTGCTTGTAGCAACTTCTGCCTAAGGAGCACTGCATGGTCTTATACTGTAGTTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CCA 90 bp | GCTAGGCCTTACACCTCTCCCACTGCTTGTTTGAACATTGTTTACTaGGGCCAGGCATGGAAGGCACGGTTTTCCCATATGGTTCCTAGT | + |
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Preference number: 1 (lower is better) Translates to: ARPYTSPTACLNIVY*GQAWKARFSHMVPS Trigger: ACTAGGAACCATATGGGAAAACCGTGCCTTCCATGCCTGGCCCCAGTAAACAATGTTCAAACAAGCAGTGGGAGAGGTGTAAGGCCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR TCA 90 bp | TCAGCTGAAGGCACGGATGCCTTTCTTACCACCAGAACACATAGCTaGTCTTGTGTAAACAGCAGGAGAGGATCCCCTCTGCTTCCTTAC | + |
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Preference number: 1 (lower is better) Translates to: SAEGTDAFLTTRTHS*SCVNSRRGSPLLPY Trigger: GTAAGGAAGCAGAGGGGATCCTCTCCTGCTGTTTACACAAGATCAGCTATGTGTTCTGGTGGTAAGAAAGGCATCCGTGCCTTCAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR GCA 90 bp | ATTTATTACTCCACTGGGAAACAACTACAGTATAAGACCATGCAGTaGTCCTTAGGCAGAAGTTGCTACAAGCAGCTCAGGGCTGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: IYYSTGKQLQYKTMQ*SLGRSCYKQLRAAG Trigger: TCCAGCAGCCCTGAGCTGCTTGTAGCAACTTCTGCCTAAGGAGCACTGCATGGTCTTATACTGTAGTTGTTTCCCAGTGGAGTAATAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR TCA 90 bp | AAACCAGTCCCTGGATCCTTAGTGAACTATAGAGGAGGGAGTACTTaGGAACTTAAGCCTTCCAGGGATCATGGTTCAAAGCCTCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: KPVPGSLVNYRGGST*ELKPSRDHGSKPLK Trigger: TTTCAGAGGCTTTGAACCATGATCCCTGGAAGGCTTAAGTTCTCAAGTACTCCCTCCTCTATAGTTCACTAAGGATCCAGGGACTGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CCA 90 bp | TCAAATGTTGACGTTTTGAAGATACAGGGGACATGTAGGTTCCCATaGGAACTGCCTCAGGTATTTGTTAACAGTAAGAAGTGGCTCGTG | + |
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Preference number: 1 (lower is better) Translates to: SNVDVLKIQGTCRFP*ELPQVFVNSKKWLV Trigger: CACGAGCCACTTCTTACTGTTAACAAATACCTGAGGCAGTTCCCATGGGAACCTACATGTCCCCTGTATCTTCAAAACGTCAACATTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR TCA 90 bp | ACTTGTTGGAGATCATCCAACACCTGTCAGTTGATCTTCCGAGGGTaGGAGGACACCTTTTGTACTTTAATGCACTTTTCTCCTCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: TCWRSSNTCQLIFRG*EDTFCTLMHFSPLH Trigger: ATGAAGAGGAGAAAAGTGCATTAAAGTACAAAAGGTGTCCTCTCACCCTCGGAAGATCAACTGACAGGTGTTGGATGATCTCCAACAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CCA 90 bp | TCCCAAGTTCAGGTTGATCACATCTGGTTTCATTTTTCTGGATTCTaGGAATTGGGAAGCATCCATCCATTTCCCAGACAATCACATCAA | + |
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Preference number: 1 (lower is better) Translates to: SQVQVDHIWFHFSGF*ELGSIHPFPRQSHQ Trigger: TTGATGTGATTGTCTGGGAAATGGATGGATGCTTCCCAATTCCCAGAATCCAGAAAAATGAAACCAGATGTGATCAACCTGAACTTGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CCA 90 bp | TTCAGGTTGATCACATCTGGTTTCATTTTTCTGGATTCTGGGAATTaGGAAGCATCCATCCATTTCCCAGACAATCACATCAACTTTGAA | + |
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Preference number: 1 (lower is better) Translates to: FRLITSGFIFLDSGN*EASIHFPDNHINFE Trigger: TTCAAAGTTGATGTGATTGTCTGGGAAATGGATGGATGCTTCCCAATTCCCAGAATCCAGAAAAATGAAACCAGATGTGATCAACCTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGTTCAGCAGTGACCAGAATGGGGTCTCTGCCCTCTCCTGGAGCCTGCACGGAAGCAGGGGAAAATaGAGAGGTCAAAGTGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: QGFSSDQNGVSALSWSLHGSRGK*RGQSGP Trigger: AGGGCCACTTTGACCTCTTCATTTTCCCCTGCTTCC...GTGCAGGCTCCAGGAGAGGGCAGAGACCCCATTCTGGTCACTGCTGAACCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGTTCAGCAGTGACCAGAATGGGGTCTCTGCCCTCTCCTGGAGCCTGCACTGGGAAGAGGCCGCCTaGAGCATATTTCAAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: QGFSSDQNGVSALSWSLHWEEAA*SIFQNR Trigger: CCTGTTTTGAAATATGCTCCAGGCGGCCTCTTCCCA...GTGCAGGCTCCAGGAGAGGGCAGAGACCCCATTCTGGTCACTGCTGAACCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGTTCAGCAGTGACCAGAATGGGGTCTCTGCCCTCTCCTGGAGCCTGCACATTGTGGCTCAGCACTaGGCTTCTCAATGCGGATAC | + |
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Preference number: 2 (lower is better) Translates to: QGFSSDQNGVSALSWSLHIVAQH*ASQCGY Trigger: GTATCCGCATTGAGAAGCCCAGTGCTGAGCCACAAT...GTGCAGGCTCCAGGAGAGGGCAGAGACCCCATTCTGGTCACTGCTGAACCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGTTCAGCAGTGACCAGAATGGGGTCTCTGCCCTCTCCTGGAGCCTGCACGGGACACACATTTCCTaGATCCAACAGAAGAGACCT | + |
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Preference number: 2 (lower is better) Translates to: QGFSSDQNGVSALSWSLHGTHIS*IQQKRP Trigger: AGGTCTCTTCTGTTGGATCCAGGAAATGTGTGTCCC...GTGCAGGCTCCAGGAGAGGGCAGAGACCCCATTCTGGTCACTGCTGAACCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGTTCAGCAGTGACCAGAATGGGGTCTCTGCCCTCTCCTGGAGCCTGCACAACTGCCGTCTGGCCTaGTTTCTAAGAGGGAAATAT | + |
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Preference number: 2 (lower is better) Translates to: QGFSSDQNGVSALSWSLHNCRLA*FLRGKY Trigger: ATATTTCCCTCTTAGAAATCAGGCCAGACGGCAGTT...GTGCAGGCTCCAGGAGAGGGCAGAGACCCCATTCTGGTCACTGCTGAACCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGGGTTCAGCAGTGACCAGAATGGGGTCTCTGCCCTCTCCTGGAGCCTGCACGGTTCCCATGGGAACTaGCTCAGGTATTTGTTAACA | + |
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Preference number: 2 (lower is better) Translates to: QGFSSDQNGVSALSWSLHGSHGN*LRYLLT Trigger: TGTTAACAAATACCTGAGGCAGTTCCCATGGGAACC...GTGCAGGCTCCAGGAGAGGGCAGAGACCCCATTCTGGTCACTGCTGAACCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCTGCATGAGTGTCTGTATGAGGGTGTCAGATGCCCTGGAACTGGAGTTACGCGGTCTTACAGACTaGGAAGAGGCCGCCTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: FACMSVCMRVSDALELELRGLTD*EEAAWS Trigger: GCTCCAGGCGGCCTCTTCCCAGTCTGTAAGACCGCG...TAACTCCAGTTCCAGGGCATCTGACACCCTCATACAGACACTCATGCAGGCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGTTCAGCAGTGACCAGAATGGGGTCTCTGCCCTCTCCTGGAGCCTGCACATTGGTAAGGAAAGATaGCCAATGCACTCTGGACTA | + |
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Preference number: 2 (lower is better) Translates to: QGFSSDQNGVSALSWSLHIGKER*PMHSGL Trigger: TAGTCCAGAGTGCATTGGCCATCTTTCCTTACCAAT...GTGCAGGCTCCAGGAGAGGGCAGAGACCCCATTCTGGTCACTGCTGAACCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGTTCAGCAGTGACCAGAATGGGGTCTCTGCCCTCTCCTGGAGCCTGCACCACGGTTTTCCCATATaGTTCCTAGTTTTTGAACAC | + |
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Preference number: 2 (lower is better) Translates to: QGFSSDQNGVSALSWSLHHGFPI*FLVFEH Trigger: GTGTTCAAAAACTAGGAACCATATGGGAAAACCGTG...GTGCAGGCTCCAGGAGAGGGCAGAGACCCCATTCTGGTCACTGCTGAACCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CAA 90 bp | CTGATGACATCTGCTGCTAGGCCTTACACCTCTCCCACTGCTTGTTaGAACATTGTTTACTGGGGCCAGGCATGGAAGGCACGGTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: LMTSAARPYTSPTAC*NIVYWGQAWKARFS Trigger: GGAAAACCGTGCCTTCCATGCCTGGCCCCAGTAAACAATGTTCAAACAAGCAGTGGGAGAGGTGTAAGGCCTAGCAGCAGATGTCATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR CCA 90 bp | GGAACTGGAGTTACAGACTGGGGATCCTCTGGAAGAGCAGCCAAGGCTCTTAACGGACAAAATAGCCCATaGAAGCACAGTGAAGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: GTGVTDWGSSGRAAKALNGQNSP*KHSEGV Trigger: TACCCCTTCACTGTGCTTCCATGGGCTATTTTGTCC...GTTAAGAGCCTTGGCTGCTCTTCCAGAGGATCCCCAGTCTGTAACTCCAGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTTCCAGGGATCATGGTTCAAAGCCTCTGAAATTCACAGGAGTCAACTAAATCCCATGGAAGCACAGTaGAGGGGTACCCTGACAGAC | + |
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Preference number: 2 (lower is better) Translates to: AFQGSWFKASEIHRSQLNPMEAQ*RGTLTD Trigger: GTCTGTCAGGGTACCCCTTCACTGTGCTTCCATGGG...ATTTAGTTGACTCCTGTGAATTTCAGAGGCTTTGAACCATGATCCCTGGAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR TCA 90 bp | CTGATCTTGTGTAAACAGCAGGAGAGGATCCCCTCTGCTTCCTTACAAAGGCTCAGTCGTAGGGCTCCCTaGGAACTAGACTCCAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: LILCKQQERIPSASLQRLSRRAP*ELDSKV Trigger: TACTTTGGAGTCTAGTTCTCAGGGAGCCCTACGACT...GAGCCTTTGTAAGGAAGCAGAGGGGATCCTCTCCTGCTGTTTACACAAGATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR TCA 90 bp | GAACTTAAGCCTTCCAGGGATCATGGTTCAAAGCCTCTGAAATTCACAGGAGTCACCCTGACAGACAGATaGGCCACAGGCCCTTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: ELKPSRDHGSKPLKFTGVTLTDR*ATGPSN Trigger: ATTTGAAGGGCCTGTGGCTCATCTGTCTGTCAGGGT...GACTCCTGTGAATTTCAGAGGCTTTGAACCATGATCCCTGGAAGGCTTAAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR GCA 90 bp | CTGATCTTGTGTAAACAGCAGGAGAGGATCCCCTCTGCTTCCTTACAAAGGCTCTGTGCACTGGTGTTTTaGCTGCATGAGTGTCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: LILCKQQERIPSASLQRLCALVF*LHECLY Trigger: ATACAGACACTCATGCAGGCAAAACACCAGTGCACA...GAGCCTTTGTAAGGAAGCAGAGGGGATCCTCTCCTGCTGTTTACACAAGATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR TCA 90 bp | CTGATCTTGTGTAAACAGCAGGAGAGGATCCCCTCTGCTTCCTTACAAAGGCTCATGGTTCAAAGCCTCTaGAATTCACAGGAGTCAACT | + |
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Preference number: 2 (lower is better) Translates to: LILCKQQERIPSASLQRLMVQSL*NSQEST Trigger: AGTTGACTCCTGTGAATTTCAGAGGCTTTGAACCAT...GAGCCTTTGTAAGGAAGCAGAGGGGATCCTCTCCTGCTGTTTACACAAGATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCCAGGGATCATGGTTCAAAGCCTCTGAAATTCACAGGAGTCAACTAAATTTGAACATTGTTTACTaGGGCCAGGCATGGAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: AFQGSWFKASEIHRSQLNLNIVY*GQAWKA Trigger: TGCCTTCCATGCCTGGCCCCAGTAAACAATGTTCAA...ATTTAGTTGACTCCTGTGAATTTCAGAGGCTTTGAACCATGATCCCTGGAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CAA 90 bp | TTGAGTGACTTCAACGCTTGTGACCGAGAGTGTCCCAAGTTCAGGTaGATCACATCTGGTTTCATTTTTCTGGATTCTGGGAATTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LSDFNACDRECPKFR*ITSGFIFLDSGNWE Trigger: TTCCCAATTCCCAGAATCCAGAAAAATGAAACCAGATGTGATCAACCTGAACTTGGGACACTCTCGGTCACAAGCGTTGAAGTCACTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR TCA 90 bp | GAATGCCGACATTTAAAGAGTATTTCAACAGACAATCAAACGACGCTTGACCGTCTCCCACTGCTTGTTTaGACATTGTTTACTGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: ECRHLKSISTDNQTTLDRLPLLV*TLFTGA Trigger: GGCCCCAGTAAACAATGTTCAAACAAGCAGTGGGAG...ACGGTCAAGCGTCGTTTGATTGTCTGTTGAAATACTCTTTAAATGTCGGCATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR CCA 90 bp | GAATGCCGACATTTAAAGAGTATTTCAACAGACAATCAAACGACGCTTGACCGTGAACCTCTACTGAGCTaGACAAAGCCACCACTCAAG | + |
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Preference number: 2 (lower is better) Translates to: ECRHLKSISTDNQTTLDREPLLS*TKPPLK Trigger: CTTGAGTGGTGGCTTTGTCCAGCTCAGTAGAGGTTC...ACGGTCAAGCGTCGTTTGATTGTCTGTTGAAATACTCTTTAAATGTCGGCATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CAA 90 bp | ATCCAACACCTGTCAGTTGATCTTCCGAGGGTGAGAGGACACCTTTaGTACTTTAATGCACTTTTCTCCTCTTCATTCTCCAGAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: IQHLSVDLPRVRGHL*YFNALFSSSFSRRK Trigger: CTTTCTTCTGGAGAATGAAGAGGAGAAAAGTGCATTAAAGTACAAAAGGTGTCCTCTCACCCTCGGAAGATCAACTGACAGGTGTTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR TCA 90 bp | GAATGCCGACATTTAAAGAGTATTTCAACAGACAATCAAACGACGCTTGACCGTCTAGTTAAGAGGGGCTaGAGTTTCCTGGCTGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: ECRHLKSISTDNQTTLDRLVKRG*SFLAVR Trigger: TCTTACAGCCAGGAAACTTCAGCCCCTCTTAACTAG...ACGGTCAAGCGTCGTTTGATTGTCTGTTGAAATACTCTTTAAATGTCGGCATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR GCA 90 bp | GAACTTAAGCCTTCCAGGGATCATGGTTCAAAGCCTCTGAAATTCACAGGAGTCTTACACCTCTCCCACTaGTTGTTTGAACATTGTTTA | + |
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Preference number: 2 (lower is better) Translates to: ELKPSRDHGSKPLKFTGVLHLSH*LFEHCL Trigger: TAAACAATGTTCAAACAAGCAGTGGGAGAGGTGTAA...GACTCCTGTGAATTTCAGAGGCTTTGAACCATGATCCCTGGAAGGCTTAAGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CAA 90 bp | GGAATTGGGAAGCATCCATCCATTTCCCAGACAATCACATCAACTTaGAAACAAATGACAGTTACCCTGAGAATGCCGACATTTAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: GIGKHPSISQTITST*KQMTVTLRMPTFKE Trigger: CTCTTTAAATGTCGGCATTCTCAGGGTAACTGTCATTTGTTTCAAAGTTGATGTGATTGTCTGGGAAATGGATGGATGCTTCCCAATTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR GCA 90 bp | GAATGCCGACATTTAAAGAGTATTTCAACAGACAATCAAACGACGCTTGACCGTTCATCATCCACGAGATaGCATTTAATGGCTAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: ECRHLKSISTDNQTTLDRSSSTR*HLMASE Trigger: CTCACTAGCCATTAAATGGCATCTCGTGGATGATGA...ACGGTCAAGCGTCGTTTGATTGTCTGTTGAAATACTCTTTAAATGTCGGCATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR TCA 90 bp | GAATGCCGACATTTAAAGAGTATTTCAACAGACAATCAAACGACGCTTGACCGTCAAATGTTGACGTTTTaGAGATACAGGGGACATGTA | + |
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Preference number: 2 (lower is better) Translates to: ECRHLKSISTDNQTTLDRQMLTF*RYRGHV Trigger: TACATGTCCCCTGTATCTTCAAAACGTCAACATTTG...ACGGTCAAGCGTCGTTTGATTGTCTGTTGAAATACTCTTTAAATGTCGGCATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR-3UTR CCA 90 bp | GAATGCCGACATTTAAAGAGTATTTCAACAGACAATCAAACGACGCTTGACCGTACAAAATTTACTTGTTaGAGATCATCCAACACCTGT | + |
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Preference number: 2 (lower is better) Translates to: ECRHLKSISTDNQTTLDRTKFTC*RSSNTC Trigger: ACAGGTGTTGGATGATCTCCAACAAGTAAATTTTGT...ACGGTCAAGCGTCGTTTGATTGTCTGTTGAAATACTCTTTAAATGTCGGCATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CCA 72 bp | GAAACAGACTCCTTGGTGGAGGCTCTGAGCGTTCTCTaGGAACAGGGCAGGTCAGAGCACTGCTCGGGTCTC | + |
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Preference number: 3 (lower is better) Translates to: ETDSLVEALSVL*EQGRSEHCSGL Trigger: GAGACCCGAGCAGTGCTCTGACCTGCCCTGTTCCCAGAGAACGCTCAGAGCCTCCACCAAGGAGTCTGTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CCA 72 bp | CAACAGGCCACCCTTTTCTCCTGTGTCAGGCAGGGCTaGGCTCCGCTGAGGAGACACAGGACAGGAAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: QQATLFSCVRQG*APLRRHRTGKG Trigger: TCCTTTTCCTGTCCTGTGTCTCCTCAGCGGAGCCCAGCCCTGCCTGACACAGGAGAAAAGGGTGGCCTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CCA 72 bp | CAAGTAGGCTACCCAGCAGCCAGTCAGCTTCTGCCCTaGCTCCCATTAAAGCTTGTGACTATTGGCCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: QVGYPAASQLLP*LPLKLVTIGQA Trigger: GGCCTGGCCAATAGTCACAAGCTTTAATGGGAGCCAGGGCAGAAGCTGACTGGCTGCTGGGTAGCCTACTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CCA 72 bp | GAGGGTGTCAGATGCCCTGGAACTGGAGTTACAGACTaGGGATCCTCTGGAAGAGCAGCCAAGGCTCTTAAC | + |
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Preference number: 3 (lower is better) Translates to: EGVRCPGTGVTD*GSSGRAAKALN Trigger: GTTAAGAGCCTTGGCTGCTCTTCCAGAGGATCCCCAGTCTGTAACTCCAGTTCCAGGGCATCTGACACCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR TCA 72 bp | CTGCTGCTAGGCCTTACACCTCTCCCACTGCTTGTTTaGACATTGTTTACTGGGGCCAGGCATGGAAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: LLLGLTPLPLLV*TLFTGARHGRH Trigger: GTGCCTTCCATGCCTGGCCCCAGTAAACAATGTTCAAACAAGCAGTGGGAGAGGTGTAAGGCCTAGCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR TCA 72 bp | AATGAAGAGGTCAAAGTGGCCCTGGCTGGCTACAGCTaGGAAACAGACTCCTTGGTGGAGGCTCTGAGCGTT | + |
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Preference number: 3 (lower is better) Translates to: NEEVKVALAGYS*ETDSLVEALSV Trigger: AACGCTCAGAGCCTCCACCAAGGAGTCTGTTTCTCAGCTGTAGCCAGCCAGGGCCACTTTGACCTCTTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR TCA 72 bp | TTAGGAGTCAGATGGGGCTACATTCTGAAGGGCAGGTaGCCAACAGGCCACCCTTTTCTCCTGTGTCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: LGVRWGYILKGR*PTGHPFLLCQA Trigger: TGCCTGACACAGGAGAAAAGGGTGGCCTGTTGGTCACCTGCCCTTCAGAATGTAGCCCCATCTGACTCCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR GCA 72 bp | CAGTATAAGACCATGCAGTGCTCCTTAGGCAGAAGTTaGTACAAGCAGCTCAGGGCTGCTGGAGGCACAGCT | + |
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Preference number: 3 (lower is better) Translates to: QYKTMQCSLGRS*YKQLRAAGGTA Trigger: AGCTGTGCCTCCAGCAGCCCTGAGCTGCTTGTAGCAACTTCTGCCTAAGGAGCACTGCATGGTCTTATACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CCA 72 bp | CATGACCGCGGTCTTACAGACTGGGAAGAGGCCGCCTaGAGCATATTTCAAAACAGGAAAGTAGTGGGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: HDRGLTDWEEAA*SIFQNRKVVGD Trigger: ATCCCCCACTACTTTCCTGTTTTGAAATATGCTCCAGGCGGCCTCTTCCCAGTCTGTAAGACCGCGGTCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR CCA 72 bp | TCTCTGCCCTCTCCTGGAGCCTGCACTGAAGGAAACTaGGGTTTTAGGAGTCAGATGGGGCTACATTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLPSPGACTEGN*GFRSQMGLHSE Trigger: TTCAGAATGTAGCCCCATCTGACTCCTAAAACCCCAGTTTCCTTCAGTGCAGGCTCCAGGAGAGGGCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR TCA 72 bp | CAAAATAGCCCATGGAAGCACAGTGAAGGGGTACCCTaGCAGACAGATGAGCCACAGGCCCTTCAAATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: QNSPWKHSEGVP*QTDEPQALQML Trigger: CAACATTTGAAGGGCCTGTGGCTCATCTGTCTGTCAGGGTACCCCTTCACTGTGCTTCCATGGGCTATTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR TCA 72 bp | GGCACGGATGCCTTTCTTACCACCAGAACACATAGCTaGTCTTGTGTAAACAGCAGGAGAGGATCCCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GTDAFLTTRTHS*SCVNSRRGSPL Trigger: CAGAGGGGATCCTCTCCTGCTGTTTACACAAGATCAGCTATGTGTTCTGGTGGTAAGAAAGGCATCCGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR CCA 72 bp | GACAAGAAAGGTTCCATGGCAGTAACACTCAGCAGTTaGCAAGCACATGACCGCGGTCTTACAGACTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: DKKGSMAVTLSS*QAHDRGLTDWE Trigger: TTCCCAGTCTGTAAGACCGCGGTCATGTGCTTGCCAACTGCTGAGTGTTACTGCCATGGAACCTTTCTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAACTGGAGTTACAGACTGGGGATCCTCTGGAAGAGCAGCCAAGGCTCTTAACGGTCTTATTAAACGATaGAGCTGCAGCACGCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: GTGVTDWGSSGRAAKALNGLIKR*SCSTLS Trigger: ACTTAGCGTGCTGCAGCTCAATCGTTTAATAAGACC...GTTAAGAGCCTTGGCTGCTCTTCCAGAGGATCCCCAGTCTGTAACTCCAGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR CCA 72 bp | TACACCTCTCCCACTGCTTGTTTGAACATTGTTTACTaGGGCCAGGCATGGAAGGCACGGTTTTCCCATATG | + |
|
Preference number: 3 (lower is better) Translates to: YTSPTACLNIVY*GQAWKARFSHM Trigger: CATATGGGAAAACCGTGCCTTCCATGCCTGGCCCCAGTAAACAATGTTCAAACAAGCAGTGGGAGAGGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR TCA 72 bp | ACAGATGAGCCACAGGCCCTTCAAATGTTGACGTTTTaGAGATACAGGGGACATGTAGGTTCCCATGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: TDEPQALQMLTF*RYRGHVGSHGN Trigger: GTTCCCATGGGAACCTACATGTCCCCTGTATCTTCAAAACGTCAACATTTGAAGGGCCTGTGGCTCATCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR TCA 72 bp | TTTAAAGAGTATTTCAACAGACAATCAAACGACGCTTaGCCGTGCCCTGTTCACTCCCTCAAGGCAGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: FKEYFNRQSNDA*PCPVHSLKAAS Trigger: GCTGGCTGCCTTGAGGGAGTGAACAGGGCACGGTCAAGCGTCGTTTGATTGTCTGTTGAAATACTCTTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR GCA 72 bp | TCCACTGGGAAACAACTACAGTATAAGACCATGCAGTaGTCCTTAGGCAGAAGTTGCTACAAGCAGCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: STGKQLQYKTMQ*SLGRSCYKQLR Trigger: CCTGAGCTGCTTGTAGCAACTTCTGCCTAAGGAGCACTGCATGGTCTTATACTGTAGTTGTTTCCCAGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAACTGGAGTTACAGACTGGGGATCCTCTGGAAGAGCAGCCAAGGCTCTTAACTCAAATGTTGACGTTTaGAAGATACAGGGGACATGT | + |
|
Preference number: 3 (lower is better) Translates to: GTGVTDWGSSGRAAKALNSNVDV*KIQGTC Trigger: ACATGTCCCCTGTATCTTCAAAACGTCAACATTTGA...GTTAAGAGCCTTGGCTGCTCTTCCAGAGGATCCCCAGTCTGTAACTCCAGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR TCA 72 bp | TCAACGCTTGTGACCGAGAGTGTCCCAAGTTCAGGTTaGTCACATCTGGTTTCATTTTTCTGGATTCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: STLVTESVPSSG*SHLVSFFWILG Trigger: TCCCAGAATCCAGAAAAATGAAACCAGATGTGATCAACCTGAACTTGGGACACTCTCGGTCACAAGCGTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTCCAGGGATCATGGTTCAAAGCCTCTGAAATTCACAGGAGTCAACTAAATCACCTCTCCCACTGCTaGTTTGAACATTGTTTACTG | + |
|
Preference number: 3 (lower is better) Translates to: AFQGSWFKASEIHRSQLNHLSHC*FEHCLL Trigger: CAGTAAACAATGTTCAAACAAGCAGTGGGAGAGGTG...ATTTAGTTGACTCCTGTGAATTTCAGAGGCTTTGAACCATGATCCCTGGAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR TCA 72 bp | TTCCTTACAAAGGCTCTAACTAGTCGTAGGGCTCCCTaGGAACTAGACTCCAAAGTACTGTATATGTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: FLTKALTSRRAP*ELDSKVLYMYR Trigger: CCTGTACATATACAGTACTTTGGAGTCTAGTTCTCAGGGAGCCCTACGACTAGTTAGAGCCTTTGTAAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR CCA 72 bp | GACGTTTTGAAGATACAGGGGACATGTAGGTTCCCATaGGAACTGCCTCAGGTATTTGTTAACAGTAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: DVLKIQGTCRFP*ELPQVFVNSKK Trigger: CTTCTTACTGTTAACAAATACCTGAGGCAGTTCCCATGGGAACCTACATGTCCCCTGTATCTTCAAAACGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR TCA 72 bp | AGATCATCCAACACCTGTCAGTTGATCTTCCGAGGGTaGGAGGACACCTTTTGTACTTTAATGCACTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RSSNTCQLIFRG*EDTFCTLMHFS Trigger: AGAAAAGTGCATTAAAGTACAAAAGGTGTCCTCTCACCCTCGGAAGATCAACTGACAGGTGTTGGATGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR TCA 72 bp | AATTTACTTGTTGGAGATCATCCAACACCTGTCAGTTaGTCTTCCGAGGGTGAGAGGACACCTTTTGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: NLLVGDHPTPVS*SSEGERTPFVL Trigger: AAGTACAAAAGGTGTCCTCTCACCCTCGGAAGATCAACTGACAGGTGTTGGATGATCTCCAACAAGTAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR GCA 72 bp | CTGGAGCATATTTCAAAACAGGAAAGTAGTGGGGGATaGTTGGTGTTCAGTGGACAATACATTCACACTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LEHISKQESSGG*LVFSGQYIHTK Trigger: CTTAGTGTGAATGTATTGTCCACTGAACACCAAGCATCCCCCACTACTTTCCTGTTTTGAAATATGCTCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR CCA 72 bp | ATCACATCTGGTTTCATTTTTCTGGATTCTGGGAATTaGGAAGCATCCATCCATTTCCCAGACAATCACATC | + |
|
Preference number: 3 (lower is better) Translates to: ITSGFIFLDSGN*EASIHFPDNHI Trigger: GATGTGATTGTCTGGGAAATGGATGGATGCTTCCCAATTCCCAGAATCCAGAAAAATGAAACCAGATGTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR CCA 72 bp | AGCATATTTCAAAACAGGAAAGTAGTGGGGGATGCTTaGTGTTCAGTGGACAATACATTCACACTAAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SIFQNRKVVGDA*CSVDNTFTLSK Trigger: CTTACTTAGTGTGAATGTATTGTCCACTGAACACCAAGCATCCCCCACTACTTTCCTGTTTTGAAATATGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR CCA 72 bp | AAATTCAACTTTATACTGGTCACAAAATTTACTTGTTaGAGATCATCCAACACCTGTCAGTTGATCTTCCGA | + |
|
Preference number: 3 (lower is better) Translates to: KFNFILVTKFTC*RSSNTCQLIFR Trigger: TCGGAAGATCAACTGACAGGTGTTGGATGATCTCCAACAAGTAAATTTTGTGACCAGTATAAAGTTGAATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGGTTCAGCAGTGACCAGAATGGGGTCTCTGCCCTCTCCTGGAGCCTGCACAAGGGCCAGGGGAGGTaGCTGTCATATTCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGFSSDQNGVSALSWSLHKGQGR*LSYSPC Trigger: GCAAGGAGAATATGACAGCCACCTCCCCTGGCCCTT...GTGCAGGCTCCAGGAGAGGGCAGAGACCCCATTCTGGTCACTGCTGAACCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGGTTCAGCAGTGACCAGAATGGGGTCTCTGCCCTCTCCTGGAGCCTGCACGCCAGAGGACAGCTTTaGTCATGGATCTCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGFSSDQNGVSALSWSLHARGQL*SWISFS Trigger: AGAGAAAGAGATCCATGATCAAAGCTGTCCTCTGGC...GTGCAGGCTCCAGGAGAGGGCAGAGACCCCATTCTGGTCACTGCTGAACCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGGTTCAGCAGTGACCAGAATGGGGTCTCTGCCCTCTCCTGGAGCCTGCACGCCAACAGTCTCATGTaGAACTGGGTATTCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGFSSDQNGVSALSWSLHANSLM*NWVFSC Trigger: GCAAGAGAATACCCAGTTGCACATGAGACTGTTGGC...GTGCAGGCTCCAGGAGAGGGCAGAGACCCCATTCTGGTCACTGCTGAACCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGGTTCAGCAGTGACCAGAATGGGGTCTCTGCCCTCTCCTGGAGCCTGCACTCCATGACCTCTTCGTaGTTTTGCCTTATAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGFSSDQNGVSALSWSLHSMTSS*FCLISA Trigger: AGCACTTATAAGGCAAAACCACGAAGAGGTCATGGA...GTGCAGGCTCCAGGAGAGGGCAGAGACCCCATTCTGGTCACTGCTGAACCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR GCA 90 bp | GAACTTAAGCCTTCCAGGGATCATGGTTCAAAGCCTCTGAAATTCACAGGAGTCTGGAGAGGTTCCCGGTaGTGGCAGAGCCACTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: ELKPSRDHGSKPLKFTGVWRGSR*WQSHSR Trigger: GCGTGAGTGGCTCTGCCAGCACCGGGAACCTCTCCA...GACTCCTGTGAATTTCAGAGGCTTTGAACCATGATCCCTGGAAGGCTTAAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR GCA 90 bp | GGAACTGGAGTTACAGACTGGGGATCCTCTGGAAGAGCAGCCAAGGCTCTTAACTGGCCACATGGTGTTTaGACTGCTTCCCGTAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGVTDWGSSGRAAKALNWPHGV*TASRKA Trigger: GGCTTTACGGGAAGCAGTGCAAACACCATGTGGCCA...GTTAAGAGCCTTGGCTGCTCTTCCAGAGGATCCCCAGTCTGTAACTCCAGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCAGGGATCATGGTTCAAAGCCTCTGAAATTCACAGGAGTCAACTAAATTGCAGGAGGCGGCCATaGCAGCGCAGCAGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: AFQGSWFKASEIHRSQLNCRRRP*QRSSHW Trigger: CCAGTGACTGCTGCGCTGCCATGGCCGCCTCCTGCA...ATTTAGTTGACTCCTGTGAATTTCAGAGGCTTTGAACCATGATCCCTGGAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR CCA 90 bp | GGAACTGGAGTTACAGACTGGGGATCCTCTGGAAGAGCAGCCAAGGCTCTTAACTCAGTACTTCGTGGCTaGAAACCCTCCTTCCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTGVTDWGSSGRAAKALNSVLRG*KPSFRR Trigger: CCTTCGGAAGGAGGGTTTCCAGCCACGAAGTACTGA...GTTAAGAGCCTTGGCTGCTCTTCCAGAGGATCCCCAGTCTGTAACTCCAGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR CAA 72 bp | TCTGCTGCTAGGCCTTACACCTCTCCCACTGCTTGTTaGAACATTGTTTACTGGGGCCAGGCATGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SAARPYTSPTAC*NIVYWGQAWKA Trigger: TGCCTTCCATGCCTGGCCCCAGTAAACAATGTTCAAACAAGCAGTGGGAGAGGTGTAAGGCCTAGCAGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR TCA 90 bp | GGAACTGGAGTTACAGACTGGGGATCCTCTGGAAGAGCAGCCAAGGCTCTTAACGCAAGGTTAACATTATaGACAGCCTGGGCCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGVTDWGSSGRAAKALNARLTL*TAWANS Trigger: ACTGTTGGCCCAGGCTGTTCATAATGTTAACCTTGC...GTTAAGAGCCTTGGCTGCTCTTCCAGAGGATCCCCAGTCTGTAACTCCAGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR TCA 90 bp | GAACTTAAGCCTTCCAGGGATCATGGTTCAAAGCCTCTGAAATTCACAGGAGTCGTCAGCTCCCGGATCTaGTGGTCCTGTCTTACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELKPSRDHGSKPLKFTGVVSSRI*WSCLTR Trigger: CCTAGTAAGACAGGACCATCAGATCCGGGAGCTGAC...GACTCCTGTGAATTTCAGAGGCTTTGAACCATGATCCCTGGAAGGCTTAAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR CCA 90 bp | CTGATCTTGTGTAAACAGCAGGAGAGGATCCCCTCTGCTTCCTTACAAAGGCTCAAAGGCAAGCAGTTCTaGTTTGGCGTCCATGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LILCKQQERIPSASLQRLKGKQF*FGVHDL Trigger: GAGGTCATGGACGCCAAACCAGAACTGCTTGCCTTT...GAGCCTTTGTAAGGAAGCAGAGGGGATCCTCTCCTGCTGTTTACACAAGATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR CCA 90 bp | CTGATCTTGTGTAAACAGCAGGAGAGGATCCCCTCTGCTTCCTTACAAAGGCTCAAAGGACGTTGGCACTaGGGACAATTCACTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LILCKQQERIPSASLQRLKGRWH*GQFTRA Trigger: TGCTCTAGTGAATTGTCCCCAGTGCCAACGTCCTTT...GAGCCTTTGTAAGGAAGCAGAGGGGATCCTCTCCTGCTGTTTACACAAGATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR CCA 90 bp | GACGTTTTGAAGATACAGGGGACATGTAGGTTCCCATGGGAACTGCCTCAGGTATTCTGGAAAGGACGTTaGCACTGGGGACAATTCACT | + |
|
Preference number: 4 (lower is better) Translates to: DVLKIQGTCRFPWELPQVFWKGR*HWGQFT Trigger: AGTGAATTGTCCCCAGTGCCAACGTCCTTTCCAGAA...TACCTGAGGCAGTTCCCATGGGAACCTACATGTCCCCTGTATCTTCAAAACGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR CCA 90 bp | GGAACTGGAGTTACAGACTGGGGATCCTCTGGAAGAGCAGCCAAGGCTCTTAACATGTGTGTATTAACCTaGCACTTCTGGAAAGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGVTDWGSSGRAAKALNMCVLT*HFWKGR Trigger: ACGTCCTTTCCAGAAGTGCCAGGTTAATACACACAT...GTTAAGAGCCTTGGCTGCTCTTCCAGAGGATCCCCAGTCTGTAACTCCAGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR CCA 90 bp | GGAACTGGAGTTACAGACTGGGGATCCTCTGGAAGAGCAGCCAAGGCTCTTAACTCTCTTCATATGCCATaGACACAGCACAGTTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: GTGVTDWGSSGRAAKALNSLHMP*TQHSLH Trigger: GTGTAAACTGTGCTGTGTCCATGGCATATGAAGAGA...GTTAAGAGCCTTGGCTGCTCTTCCAGAGGATCCCCAGTCTGTAACTCCAGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR CCA 90 bp | GGAACTGGAGTTACAGACTGGGGATCCTCTGGAAGAGCAGCCAAGGCTCTTAACAGTCTCATGTGCAACTaGGTATTCTCTTGCAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGVTDWGSSGRAAKALNSLMCN*VFSCKC Trigger: ACACTTGCAAGAGAATACCCAGTTGCACATGAGACT...GTTAAGAGCCTTGGCTGCTCTTCCAGAGGATCCCCAGTCTGTAACTCCAGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR CCA 90 bp | GAATGCCGACATTTAAAGAGTATTTCAACAGACAATCAAACGACGCTTGACCGTAGGCGTATTGTACCCTaGAAGGGCCAGGGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ECRHLKSISTDNQTTLDRRRIVP*KGQGRW Trigger: CCACCTCCCCTGGCCCTTCCAGGGTACAATACGCCT...ACGGTCAAGCGTCGTTTGATTGTCTGTTGAAATACTCTTTAAATGTCGGCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR TCA 90 bp | GGAACTGGAGTTACAGACTGGGGATCCTCTGGAAGAGCAGCCAAGGCTCTTAACCTCTGCATCTTTTCATaGCAGCCAAAAACACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GTGVTDWGSSGRAAKALNLCIFS*QPKTLN Trigger: ATTCAGTGTTTTTGGCTGTCATGAAAAGATGCAGAG...GTTAAGAGCCTTGGCTGCTCTTCCAGAGGATCCCCAGTCTGTAACTCCAGTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR GCA 90 bp | CTGATCTTGTGTAAACAGCAGGAGAGGATCCCCTCTGCTTCCTTACAAAGGCTCTTTACACAAGAAACCTaGCTCCTGGGACAATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LILCKQQERIPSASLQRLFTQET*LLGQSS Trigger: TGAGGATTGTCCCAGGAGGCAGGTTTCTTGTGTAAA...GAGCCTTTGTAAGGAAGCAGAGGGGATCCTCTCCTGCTGTTTACACAAGATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR CCA 90 bp | GACGTTTTGAAGATACAGGGGACATGTAGGTTCCCATGGGAACTGCCTCAGGTAAGTTTCCTCATAATTTaGGTCCTCTGGACGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: DVLKIQGTCRFPWELPQVSFLII*VLWTTS Trigger: GGATGTCGTCCAGAGGACCCAAATTATGAGGAAACT...TACCTGAGGCAGTTCCCATGGGAACCTACATGTCCCCTGTATCTTCAAAACGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR CCA 90 bp | GACGTTTTGAAGATACAGGGGACATGTAGGTTCCCATGGGAACTGCCTCAGGTAGGTCTTTCCTCTTCTTaGGATTTCAAGTGCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DVLKIQGTCRFPWELPQVGLSSS*DFKCIP Trigger: TGGGATGCACTTGAAATCCCAAGAAGAGGAAAGACC...TACCTGAGGCAGTTCCCATGGGAACCTACATGTCCCCTGTATCTTCAAAACGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR GCA 90 bp | GAACTTAAGCCTTCCAGGGATCATGGTTCAAAGCCTCTGAAATTCACAGGAGTCTGGGCACTTGTGCCCTaGATCCCTTATGGATTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ELKPSRDHGSKPLKFTGVWALVP*IPYGFD Trigger: ATCAAATCCATAAGGGATGCAGGGCACAAGTGCCCA...GACTCCTGTGAATTTCAGAGGCTTTGAACCATGATCCCTGGAAGGCTTAAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCCTGCATGAGTGTCTGTATGAGGGTGTCAGATGCCCTGGAACTGGAGTTAGTTTTGCCTTATAAGTaGTTCAGACTGGTCGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FACMSVCMRVSDALELELVLPYK*FRLVEN Trigger: ATTCTCGACCAGTCTGAAGCACTTATAAGGCAAAAC...TAACTCCAGTTCCAGGGCATCTGACACCCTCATACAGACACTCATGCAGGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR CAA 72 bp | TTCAACGCTTGTGACCGAGAGTGTCCCAAGTTCAGGTaGATCACATCTGGTTTCATTTTTCTGGATTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FNACDRECPKFR*ITSGFIFLDSG Trigger: CCCAGAATCCAGAAAAATGAAACCAGATGTGATCAACCTGAACTTGGGACACTCTCGGTCACAAGCGTTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR CCA 90 bp | GAATGCCGACATTTAAAGAGTATTTCAACAGACAATCAAACGACGCTTGACCGTCTTGCTCTCCAGAGGTaGGTCAAACTCCACATCGTA | + |
|
Preference number: 4 (lower is better) Translates to: ECRHLKSISTDNQTTLDRLALQR*VKLHIV Trigger: TACGATGTGGAGTTTGACCCACCTCTGGAGAGCAAG...ACGGTCAAGCGTCGTTTGATTGTCTGTTGAAATACTCTTTAAATGTCGGCATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCAGGGATCATGGTTCAAAGCCTCTGAAATTCACAGGAGTCAACTAAATCAAACAGCCTTTATTTaGGCACTTTACCGTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AFQGSWFKASEIHRSQLNQTAFI*ALYRQG Trigger: TCCCTGACGGTAAAGTGCCCAAATAAAGGCTGTTTG...ATTTAGTTGACTCCTGTGAATTTCAGAGGCTTTGAACCATGATCCCTGGAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
||
| 3UTR CAA 72 bp | CTGTCAGTTGATCTTCCGAGGGTGAGAGGACACCTTTaGTACTTTAATGCACTTTTCTCCTCTTCATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSVDLPRVRGHL*YFNALFSSSFS Trigger: GGAGAATGAAGAGGAGAAAAGTGCATTAAAGTACAAAAGGTGTCCTCTCACCCTCGGAAGATCAACTGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| CDS-3UTR GCA 90 bp | GCCTTCCAGGGATCATGGTTCAAAGCCTCTGAAATTCACAGGAGTCAACTAAATCTCTTTCTCTTCATATaGCATGGACACAGCACAGTT | + |
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Preference number: 4 (lower is better) Translates to: AFQGSWFKASEIHRSQLNLFLFI*HGHSTV Trigger: AACTGTGCTGTGTCCATGGCATATGAAGAGAAAGAG...ATTTAGTTGACTCCTGTGAATTTCAGAGGCTTTGAACCATGATCCCTGGAAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| CDS-3UTR CCA 90 bp | GAATGCCGACATTTAAAGAGTATTTCAACAGACAATCAAACGACGCTTGACCGTAGGGATTGGAGCTGTTaGGCAGTCCAGATCATAATG | + |
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Preference number: 4 (lower is better) Translates to: ECRHLKSISTDNQTTLDRRDWSC*AVQIIM Trigger: CATTATGATCTGGACTGCCCAACAGCTCCAATCCCT...ACGGTCAAGCGTCGTTTGATTGTCTGTTGAAATACTCTTTAAATGTCGGCATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CAA 72 bp | AGAAAGCGGCTTTCTAGGCTAAGACTTGATCCTGAGTaGACCTTACTAAGTGTTGACCTTGAATGTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: RKRLSRLRLDPE*TLLSVDLECQL Trigger: AAGCTGACATTCAAGGTCAACACTTAGTAAGGTCAACTCAGGATCAAGTCTTAGCCTAGAAAGCCGCTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CAA 72 bp | AAGCATCCATCCATTTCCCAGACAATCACATCAACTTaGAAACAAATGACAGTTACCCTGAGAATGCCGACA | + |
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Preference number: 4 (lower is better) Translates to: KHPSISQTITST*KQMTVTLRMPT Trigger: TGTCGGCATTCTCAGGGTAACTGTCATTTGTTTCAAAGTTGATGTGATTGTCTGGGAAATGGATGGATGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CAA 72 bp | GATCACATCTGGTTTCATTTTTCTGGATTCTGGGAATaGGGAAGCATCCATCCATTTCCCAGACAATCACAT | + |
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Preference number: 4 (lower is better) Translates to: DHIWFHFSGFWE*GSIHPFPRQSH Trigger: ATGTGATTGTCTGGGAAATGGATGGATGCTTCCCAATTCCCAGAATCCAGAAAAATGAAACCAGATGTGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CAA 72 bp | AATGCACTCTGGACTATACGGATTCTTATAGGCCCATaGGTACAAAGAGAATGTTCAGAAAGTGGTGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: NALWTIRILIGP*VQRECSESGEV Trigger: TACTTCACCACTTTCTGAACATTCTCTTTGTACCAATGGGCCTATAAGAATCCGTATAGTCCAGAGTGCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| 3UTR CAA 72 bp | CAAATTCAACTTTATACTGGTCACAAAATTTACTTGTaGGAGATCATCCAACACCTGTCAGTTGATCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: QIQLYTGHKIYL*EIIQHLSVDLP Trigger: CGGAAGATCAACTGACAGGTGTTGGATGATCTCCAACAAGTAAATTTTGTGACCAGTATAAAGTTGAATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| CDS GCA 90 bp | CGGTGCTGGCAGAGCCACTCACGCTGTCATCTTTCACTGCAGCGCTaGAGGAGGCGGCCATGGCAGCGCAGCAGTCACTGGACGACTGGC | + |
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Preference number: 5 (lower is better) Translates to: RCWQSHSRCHLSLQR*RRRPWQRSSHWTTG Trigger: GCCAGTCGTCCAGTGACTGCTGCGCTGCCATGGCCGCCTCCTGCAGCGCTGCAGTGAAAGATGACAGCGTGAGTGGCTCTGCCAGCACCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| CDS-3UTR CAA 90 bp | GACGTTTTGAAGATACAGGGGACATGTAGGTTCCCATGGGAACTGCCTCAGGTATGCCAGAGGACAGCTTaGATCATGGATCTCTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: DVLKIQGTCRFPWELPQVCQRTA*IMDLFL Trigger: GAGAAAGAGATCCATGATCAAAGCTGTCCTCTGGCA...TACCTGAGGCAGTTCCCATGGGAACCTACATGTCCCCTGTATCTTCAAAACGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| CDS-3UTR CAA 90 bp | TTTGCCTGCATGAGTGTCTGTATGAGGGTGTCAGATGCCCTGGAACTGGAGTTAAAGGGATTGGAGCTGTaGGGCAGTCCAGATCATAAT | + |
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Preference number: 5 (lower is better) Translates to: FACMSVCMRVSDALELELKGLEL*GSPDHN Trigger: ATTATGATCTGGACTGCCCAACAGCTCCAATCCCTT...TAACTCCAGTTCCAGGGCATCTGACACCCTCATACAGACACTCATGCAGGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| CDS CCA 90 bp | GAAACCTGCCTCCTGGGACAATCCTCAATAATGTGTGTATTAACCTaGCACTTCTGGAAAGGACGTTGGCACTGGGGACAATTCACTAGA | + |
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Preference number: 5 (lower is better) Translates to: ETCLLGQSSIMCVLT*HFWKGRWHWGQFTR Trigger: TCTAGTGAATTGTCCCCAGTGCCAACGTCCTTTCCAGAAGTGCCAGGTTAATACACACATTATTGAGGATTGTCCCAGGAGGCAGGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| CDS-3UTR CAA 90 bp | GACGTTTTGAAGATACAGGGGACATGTAGGTTCCCATGGGAACTGCCTCAGGTAGACCTCTTCGTGGTTTaGCCTTATAAGTGCTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: DVLKIQGTCRFPWELPQVDLFVV*PYKCFR Trigger: TCTGAAGCACTTATAAGGCAAAACCACGAAGAGGTC...TACCTGAGGCAGTTCCCATGGGAACCTACATGTCCCCTGTATCTTCAAAACGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| CDS-3UTR CAA 90 bp | GAATGCCGACATTTAAAGAGTATTTCAACAGACAATCAAACGACGCTTGACCGTATGGGACACTCATACTaGCTCTCCAGAGGTGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: ECRHLKSISTDNQTTLDRMGHSY*LSRGGS Trigger: TGACCCACCTCTGGAGAGCAAGTATGAGTGTCCCAT...ACGGTCAAGCGTCGTTTGATTGTCTGTTGAAATACTCTTTAAATGTCGGCATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| CDS-3UTR CAA 90 bp | GCCTTCCAGGGATCATGGTTCAAAGCCTCTGAAATTCACAGGAGTCAACTAAATAGGTCTTTCCTCTTCTaGGGATTTCAAGTGCATCCC | + |
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Preference number: 5 (lower is better) Translates to: AFQGSWFKASEIHRSQLNRSFLF*GFQVHP Trigger: GGGATGCACTTGAAATCCCAAGAAGAGGAAAGACCT...ATTTAGTTGACTCCTGTGAATTTCAGAGGCTTTGAACCATGATCCCTGGAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| CDS-3UTR CAA 90 bp | CTGATCTTGTGTAAACAGCAGGAGAGGATCCCCTCTGCTTCCTTACAAAGGCTCAAATTCACAATGTACTaGATGATCCTCGAGATGTCT | + |
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Preference number: 5 (lower is better) Translates to: LILCKQQERIPSASLQRLKFTMY*MILEMS Trigger: AGACATCTCGAGGATCATCAAGTACATTGTGAATTT...GAGCCTTTGTAAGGAAGCAGAGGGGATCCTCTCCTGCTGTTTACACAAGATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| CDS GCA 72 bp | GGTGCTGGCAGAGCCACTCACGCTGTCATCTTTCACTaGAGCGCTGCAGGAGGCGGCCATGGCAGCGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: GAGRATHAVIFH*SAAGGGHGSAA Trigger: TGCTGCGCTGCCATGGCCGCCTCCTGCAGCGCTGCAGTGAAAGATGACAGCGTGAGTGGCTCTGCCAGCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| CDS GCA 72 bp | CAGAGCCACTCACGCTGTCATCTTTCACTGCAGCGCTaGAGGAGGCGGCCATGGCAGCGCAGCAGTCACTGG | + |
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Preference number: 6 (lower is better) Translates to: QSHSRCHLSLQR*RRRPWQRSSHW Trigger: CCAGTGACTGCTGCGCTGCCATGGCCGCCTCCTGCAGCGCTGCAGTGAAAGATGACAGCGTGAGTGGCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| CDS CCA 72 bp | GAGGCGGCCATGGCAGCGCAGCAGTCACTGGACGACTaGCTGGACCCGCAGCTGTTCTCACAGTTTAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: EAAMAAQQSLDD*LDPQLFSQFKR Trigger: TCTCTTAAACTGTGAGAACAGCTGCGGGTCCAGCCAGTCGTCCAGTGACTGCTGCGCTGCCATGGCCGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| CDS GCA 72 bp | AGCGCTGAGCTGTCGGTAACTGAAGATGCAGGCGCATaGACAGCTTGTACCCAGGTCTGCCTGTGTAGAATC | + |
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Preference number: 6 (lower is better) Translates to: SAELSVTEDAGA*TACTQVCLCRI Trigger: GATTCTACACAGGCAGACCTGGGTACAAGCTGTGCATGCGCCTGCATCTTCAGTTACCGACAGCTCAGCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| CDS CCA 72 bp | ATGTGTGTATTAACCTGGCACTTCTGGAAAGGACGTTaGCACTGGGGACAATTCACTAGAGCAAATTCACAA | + |
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Preference number: 6 (lower is better) Translates to: MCVLTWHFWKGR*HWGQFTRANSQ Trigger: TTGTGAATTTGCTCTAGTGAATTGTCCCCAGTGCCAACGTCCTTTCCAGAAGTGCCAGGTTAATACACACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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| CDS CAA 72 bp | ACAGTATTCACAGATGATATTTGCCAGAGGACAGCTTaGATCATGGATCTCTTTCTCTTCATATGCCATGGA | + |
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Preference number: 6 (lower is better) Translates to: TVFTDDICQRTA*IMDLFLFICHG Trigger: TCCATGGCATATGAAGAGAAAGAGATCCATGATCAAAGCTGTCCTCTGGCAAATATCATCTGTGAATACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004949.8 |
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