Pregenerated sensors for TRAF5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026637Ensembl transcript IDs: ENSMUST00000195815.3
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTaGGCCCAAGGGACAGCCACACCTTTTCCTGTGCTGAGAAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: RRQEDKNKSLLSPEG*AQGTATPFPVLRSF Trigger: GAAACTTCTCAGCACAGGAAAAGGTGTGGCTGTCCCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| 3UTR TCA 90 bp | AAGAGTTTAAAGTTTCAAACCAGGGAAGGATCCAAGATAAAAAGATaGCACATCAGACATCGGAGGCAGGAAGACAAGAACAAGAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: KSLKFQTREGSKIKR*HIRHRRQEDKNKSL Trigger: CAGGCTCTTGTTCTTGTCTTCCTGCCTCCGATGTCTGATGTGTCATCTTTTTATCTTGGATCCTTCCCTGGTTTGAAACTTTAAACTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| 3UTR-3UTR TCA 90 bp | CATCGGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCACCTTTTCCTGTGCTaGGAAGTTTCCTTATCAGGT | + |
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Preference number: 2 (lower is better) Translates to: HRRQEDKNKSLLSPEGCAHLFLC*EVSLSG Trigger: ACCTGATAAGGAAACTTCTCAGCACAGGAAAAGGTG...GGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| 3UTR GCA 72 bp | TCAGACATCGGAGGCAGGAAGACAAGAACAAGAGCCTaGTCAGTCCAGAGGGCTGCGCCCAAGGGACAGCCA | + |
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Preference number: 3 (lower is better) Translates to: SDIGGRKTRTRA*SVQRAAPKGQP Trigger: TGGCTGTCCCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCGATGTCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| 3UTR GCA 72 bp | GAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTaGGCCCAAGGGACAGCCACACCTTTTCCTGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: EDKNKSLLSPEG*AQGTATPFPVL Trigger: CAGCACAGGAAAAGGTGTGGCTGTCCCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| 3UTR TCA 72 bp | AAGTTTCAAACCAGGGAAGGATCCAAGATAAAAAGATaGCACATCAGACATCGGAGGCAGGAAGACAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: KFQTREGSKIKR*HIRHRRQEDKN Trigger: GTTCTTGTCTTCCTGCCTCCGATGTCTGATGTGTCATCTTTTTATCTTGGATCCTTCCCTGGTTTGAAACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR GCA 90 bp | ACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGGGACAGCCACACTGCTGGCAGAAGCGGTaGCCGCAGCCGGTCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TRTRACSVQRAAPKGQPHCWQKR*PQPVWW Trigger: CCACCAGACCGGCTGCGGGCACCGCTTCTGCCAGCA...GTGTGGCTGTCCCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR CCA 90 bp | GGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGGACCGGATGCACTGCTaGCAGAAGCGGTGCCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: GGRKTRTRACSVQRAAPKDRMHC*QKRCPQ Trigger: CTGCGGGCACCGCTTCTGCCAGCAGTGCATCCGGTC...CTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR GCA 90 bp | CATCGGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCAGAGACCGGATGCACTaGTGGCAGAAGCGGTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: HRRQEDKNKSLLSPEGCARDRMH*WQKRCP Trigger: CGGGCACCGCTTCTGCCAGCAGTGCATCCGGTCTCT...GGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR TCA 90 bp | CGGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGTCTGGTGGGGGTTGTaGAGCACGGAGTGGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: RRQEDKNKSLLSPEGCAQVWWGL*STEWQK Trigger: CTTCTGCCACTCCGTGCTTCACAACCCCCACCAGAC...TTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR TCA 90 bp | AGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGGGACAGCCACACCTTGCTGACTTGTCCGTGTaGCTGGTGAGAGCCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: RTRACSVQRAAPKGQPHLADLSV*LVRAWT Trigger: TGTCCAGGCTCTCACCAGTCACACGGACAAGTCAGC...AAGGTGTGGCTGTCCCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR TCA 90 bp | AGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGGGCGCTTCCAGCCAAGCTaGCTTGTCCGTGTGACTGGT | + |
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Preference number: 4 (lower is better) Translates to: RQEDKNKSLLSPEGCAQGRFQPS*LVRVTG Trigger: ACCAGTCACACGGACAAGTCAGCTTGGCTGGAAGCG...CCCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR CCA 90 bp | ATCAGACATCGGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCCGTTCAGGTACGCCCTaGCACAGAGCCGGTAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: IRHRRQEDKNKSLLSPEGRSGTP*HRAGSR Trigger: GCGGCTACCGGCTCTGTGCCAGGGCGTACCTGAACG...GCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCGATGTCTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR TCA 90 bp | AGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGGGTGTAGAAAGGCTGGCTaGAGACGGACACTGTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RQEDKNKSLLSPEGCAQGCRKAG*RRTLCA Trigger: GGCACACAGTGTCCGTCTTCAGCCAGCCTTTCTACA...CCCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR GCA 90 bp | ATCAGACATCGGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCAGCAGCTGCCGCACCTaGGCTTCCAGCCAAGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: IRHRRQEDKNKSLLSPEGSSCRT*ASSQAD Trigger: GTCAGCTTGGCTGGAAGCGCAGGTGCGGCAGCTGCT...GCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCGATGTCTGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR GCA 90 bp | AGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGGGACAGCCACACCTTTGCCTGAACGGCCACTaGAGCAGCGAGTCAAACTCA | + |
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Preference number: 4 (lower is better) Translates to: RTRACSVQRAAPKGQPHLCLNGH*SSESNS Trigger: TGAGTTTGACTCGCTGCTGCAGTGGCCGTTCAGGCA...AAGGTGTGGCTGTCCCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR TCA 90 bp | CAGACATCGGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCATCTGGCCTTTTaGAGCTGCTGCTGTTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: QTSEAGRQEQEPAQSRGLRHLAF*SCCCWG Trigger: ACCCCAACAGCAGCAGCTTCAAAAGGCCAGATGGCG...CAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCGATGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGTTCTCCAGAGTAGAGTaGGACACAAAGCGGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: GGRKTRTRACSVQRAAPKFSRVE*DTKRGQ Trigger: CTGTCCCCGCTTTGTGTCGCACTCTACTCTGGAGAA...CTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR CCA 90 bp | AGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGGGTCACTGGCTTCCAGCTaGGTGATCCTCTGTTTCACG | + |
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Preference number: 4 (lower is better) Translates to: RQEDKNKSLLSPEGCAQGSLASS*VILCFT Trigger: CGTGAAACAGAGGATCACCCAGCTGGAAGCCAGTGA...CCCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR TCA 90 bp | ATCAGACATCGGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTCCCCCGCTTACCCTTaGCAGTGCAGCCATAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: IRHRRQEDKNKSLLSPEGSPAYP*QCSHSA Trigger: AGCACTATGGCTGCACTGTCAAGGGTAAGCGGGGGA...GCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCGATGTCTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR GCA 90 bp | GAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGGCCAGCTGCTGGATCTTaGTTTCCTTCTGTTCGAGAC | + |
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Preference number: 4 (lower is better) Translates to: EAGRQEQEPAQSRGLRPRPAAGS*FPSVRD Trigger: GTCTCGAACAGAAGGAAAGCAAGATCCAGCAGCTGG...CCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR GCA 90 bp | ATCGGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCCTTCTTCACGGTTTCTaGCAGCTGCTGGATCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: IGGRKTRTRACSVQRAAPLLHGF*QLLDLA Trigger: AGCAAGATCCAGCAGCTGGCAGAAACCGTGAAGAAG...GGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR GCA 90 bp | CGCCCAAGGGACAGCCACACCTTTTCCTGTGCTGAGAAGTTTCCTTATCAGGTAAAGACGGACACTGTGTaGCCCTCCACGGCCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: RPRDSHTFSCAEKFPYQVKTDTV*PSTASL Trigger: GAGGGAGGCCGTGGAGGGGCACACAGTGTCCGTCTT...TACCTGATAAGGAAACTTCTCAGCACAGGAAAAGGTGTGGCTGTCCCTTGGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR TCA 90 bp | ATCGGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAAGTCCAAGGAAATTaGGTTGCCAGAGTTCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: IGGRKTRTRACSVQRAAPKVQGN*VARVLA Trigger: CGCCAGAACTCTGGCAACTCAATTTCCTTGGACTTT...GGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR TCA 90 bp | AGTCCAGAGGGCTGCGCCCAAGGGACAGCCACACCTTTTCCTGTGCTGAGAAGTTCTTTGAACACCTCCTaGGGCTTGATGACCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SPEGCAQGTATPFPVLRSSLNTS*GLMTSL Trigger: CAAGGAGGTCATCAAGCCTCAGGAGGTGTTCAAAGA...ACTTCTCAGCACAGGAAAAGGTGTGGCTGTCCCTTGGGCGCAGCCCTCTGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR TCA 90 bp | TCAGACATCGGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTTGGCTTCCAGCTGGGTaGTCCTCTGTTTCACGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SDIGGRKTRTRACSVQRAWLPAG*SSVSRC Trigger: ACAGCGTGAAACAGAGGATCACCCAGCTGGAAGCCA...AGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCGATGTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR CCA 90 bp | GAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGGCATGATCCTGCAGGTTaGTCACCACTATGTCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: EAGRQEQEPAQSRGLRPRHDPAG*SPLCPF Trigger: AAAGGGACATAGTGGTGACCAACCTGCAGGATCATG...CCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR TCA 90 bp | CCAGAGGGCTGCGCCCAAGGGACAGCCACACCTTTTCCTGTGCTGAGAAGTTTCTGTTGGGGTCAGCTTTaGAGGTCTCCACAATATGGT | + |
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Preference number: 4 (lower is better) Translates to: PEGCAQGTATPFPVLRSFCWGQL*RSPQYG Trigger: ACCATATTGTGGAGACCTTCAAAGCTGACCCCAACA...GAAACTTCTCAGCACAGGAAAAGGTGTGGCTGTCCCTTGGGCGCAGCCCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR GCA 90 bp | CATCGGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCTTAAAGGGACAGTCTTaGTCAGCCTCAGGACATACA | + |
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Preference number: 4 (lower is better) Translates to: HRRQEDKNKSLLSPEGCALKGQS*SASGHT Trigger: TGTATGTCCTGAGGCTGAGCAAGACTGTCCCTTTAA...GGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR TCA 90 bp | GGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGTTCTGTTCGAGACTCTaGTATAAATCAGAGATCCGC | + |
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Preference number: 4 (lower is better) Translates to: GGRKTRTRACSVQRAAPKFCSRL*YKSEIR Trigger: GCGGATCTCTGATTTATATCAGAGTCTCGAACAGAA...CTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR TCA 90 bp | CGCCCAAGGGACAGCCACACCTTTTCCTGTGCTGAGAAGTTTCCTTATCAGGTACTGTCACCTTCCAGATaGGCTTGCCACTGTAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RPRDSHTFSCAEKFPYQVLSPSR*ACHCSR Trigger: CCTGCTACAGTGGCAAGCTCATCTGGAAGGTGACAG...TACCTGATAAGGAAACTTCTCAGCACAGGAAAAGGTGTGGCTGTCCCTTGGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR GCA 90 bp | AGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGGGTCAAGTCGACTTGGCTaGTGGTTAACTATTTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: RQEDKNKSLLSPEGCAQGSSRLG*WLTICS Trigger: GCTACAAATAGTTAACCAGCAGCCAAGTCGACTTGA...CCCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR CCA 90 bp | AGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGGGACAGCCACACCTTTTCAGCTGTGCTTTGTaGATATTAATGTGTGCGTCG | + |
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Preference number: 4 (lower is better) Translates to: RTRACSVQRAAPKGQPHLFSCAL*ILMCAS Trigger: CGACGCACACATTAATATCCACAAAGCACAGCTGAA...AAGGTGTGGCTGTCCCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR CCA 90 bp | GGCTGCGCCCAAGGGACAGCCACACCTTTTCCTGTGCTGAGAAGTTTCCTTATCTTCTTCTTGCCGCTCTaGTCCAAAAGCATCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: GCAQGTATPFPVLRSFLIFFLPL*SKSIRV Trigger: GACCCTGATGCTTTTGGACCAGAGCGGCAAGAAGAA...GATAAGGAAACTTCTCAGCACAGGAAAAGGTGTGGCTGTCCCTTGGGCGCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR TCA 90 bp | AGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGGGAGTAGACGTGTAAATTaGGAACTTCTCTTTTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RQEDKNKSLLSPEGCAQGSRRVN*ELLFCS Trigger: GCTGCAAAAGAGAAGTTCTCAATTTACACGTCTACT...CCCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR TCA 90 bp | CGCCCAAGGGACAGCCACACCTTTTCCTGTGCTGAGAAGTTTCCTTATCAGGTATGTCCGTGTGACTGGTaGGAGCCTGGACATTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: RPRDSHTFSCAEKFPYQVCPCDW*EPGHLR Trigger: TCTCAAATGTCCAGGCTCTCACCAGTCACACGGACA...TACCTGATAAGGAAACTTCTCAGCACAGGAAAAGGTGTGGCTGTCCCTTGGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR CCA 90 bp | GGCTGCGCCCAAGGGACAGCCACACCTTTTCCTGTGCTGAGAAGTTTCCTTATCAAGGTCTCCACAATATaGTTCTTCTTGCCGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GCAQGTATPFPVLRSFLIKVSTI*FFLPLW Trigger: CCAGAGCGGCAAGAAGAACCATATTGTGGAGACCTT...GATAAGGAAACTTCTCAGCACAGGAAAAGGTGTGGCTGTCCCTTGGGCGCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR GCA 90 bp | AAAAAGATGACACATCAGACATCGGAGGCAGGAAGACAAGAACAAGAGCCTGCTCTCTCAGAGACCGGATaGACTGCTGGCAGAAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: KKMTHQTSEAGRQEQEPALSETG*TAGRSG Trigger: ACCGCTTCTGCCAGCAGTGCATCCGGTCTCTGAGAG...AGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCGATGTCTGATGTGTCATCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR CCA 90 bp | TCAGACATCGGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTATTCACCCTAGCTCTTaGAATAGTCTGCACACACCT | + |
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Preference number: 4 (lower is better) Translates to: SDIGGRKTRTRACSVQRAIHPSS*NSLHTP Trigger: AGGTGTGTGCAGACTATTCCAAGAGCTAGGGTGAAT...AGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCGATGTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR GCA 90 bp | AGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGGGACAGCCACACCTTGTTCTTATTCAGCTGTaGTTTGTGGATATTAATGTG | + |
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Preference number: 4 (lower is better) Translates to: RTRACSVQRAAPKGQPHLVLIQL*FVDINV Trigger: CACATTAATATCCACAAAGCACAGCTGAATAAGAAC...AAGGTGTGGCTGTCCCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR CCA 90 bp | CGCCCAAGGGACAGCCACACCTTTTCCTGTGCTGAGAAGTTTCCTTATCAGGTAAAAAGAACTAATCTCTaGTCACTGGCTTCCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RPRDSHTFSCAEKFPYQVKRTNL*SLASSW Trigger: CCAGCTGGAAGCCAGTGACCAGAGATTAGTTCTTTT...TACCTGATAAGGAAACTTCTCAGCACAGGAAAAGGTGTGGCTGTCCCTTGGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR GCA 90 bp | AAAGTTTCAAACCAGGGAAGGATCCAAGATAAAAAGATGACACATCAGACATCGTCGGAACCGGCAGTATaGGCTCAGGTGCTCTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: KVSNQGRIQDKKMTHQTSSEPAV*AQVLFH Trigger: GTGAAAGAGCACCTGAGCGCATACTGCCGGTTCCGA...CGATGTCTGATGTGTCATCTTTTTATCTTGGATCCTTCCCTGGTTTGAAACTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR GCA 90 bp | GTTTCAAACCAGGGAAGGATCCAAGATAAAAAGATGACACATCAGACATCGGAGACGGTTTCTGCCAGCTaGTGGATCTTGCTTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: VSNQGRIQDKKMTHQTSETVSAS*WILLSF Trigger: GAAGGAAAGCAAGATCCAGCAGCTGGCAGAAACCGT...CTCCGATGTCTGATGTGTCATCTTTTTATCTTGGATCCTTCCCTGGTTTGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR TCA 90 bp | TTTAAAGTTTCAAACCAGGGAAGGATCCAAGATAAAAAGATGACACATCAGACAGAGAGCCTGGACATTTaGGAGGAAAGTTCCATTTCT | + |
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Preference number: 4 (lower is better) Translates to: FKVSNQGRIQDKKMTHQTESLDI*EESSIS Trigger: AGAAATGGAACTTTCCTCTCAAATGTCCAGGCTCTC...TGTCTGATGTGTCATCTTTTTATCTTGGATCCTTCCCTGGTTTGAAACTTTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR CAA 90 bp | ATCGGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCGGCTTGATGACCTCCTaGTCTACCGGGCAGATCGGC | + |
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Preference number: 5 (lower is better) Translates to: IGGRKTRTRACSVQRAAPGLMTS*STGQIG Trigger: GCCGATCTGCCCGGTAGACAAGGAGGTCATCAAGCC...GGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS-3UTR CAA 90 bp | GAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGGAGGGCAGGGCACGGCTaGGAAGGAACAGTGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: EAGRQEQEPAQSRGLRPRRAGHG*EGTVLK Trigger: CTTCAGCACTGTTCCTTCCAAGCCGTGCCCTGCCCT...CCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS TCA 90 bp | TCTTCTTGCCGCTCTGGTCCAAAAGCATCAGGGTCACCCTCTGCCTaGACGGCCACTGCAGCAGCGAGTCAAACTCACCGCGCATCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SSCRSGPKASGSPSA*TATAAASQTHRASP Trigger: TGGTGATGCGCGGTGAGTTTGACTCGCTGCTGCAGTGGCCGTTCAGGCAGAGGGTGACCCTGATGCTTTTGGACCAGAGCGGCAAGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS GCA 90 bp | TGGTTCTTCTTGCCGCTCTGGTCCAAAAGCATCAGGGTCACCCTCTaGCTGAACGGCCACTGCAGCAGCGAGTCAAACTCACCGCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: WFFLPLWSKSIRVTL*LNGHCSSESNSPRI Trigger: GATGCGCGGTGAGTTTGACTCGCTGCTGCAGTGGCCGTTCAGGCAGAGGGTGACCCTGATGCTTTTGGACCAGAGCGGCAAGAAGAACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS TCA 90 bp | CTCCACAAACTGGTACTCGGTGTCGGGCTCAAAGTCCAAGGAAATTaGGTTGCCAGAGTTCTGGCGGATGAAGGCGCAGGGGACAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LHKLVLGVGLKVQGN*VARVLADEGAGDSR Trigger: GCGGCTGTCCCCTGCGCCTTCATCCGCCAGAACTCTGGCAACTCAATTTCCTTGGACTTTGAGCCCGACACCGAGTACCAGTTTGTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS TCA 90 bp | CGGCAGCTCTCGTTAGGGCAGGGCACGGCTTGGAAGGAACAGTGCTaGAGGTGGTCCTGGAATCGTCCCAGAATAATCCTGGCATTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RQLSLGQGTAWKEQC*RWSWNRPRIILALH Trigger: GTGCAATGCCAGGATTATTCTGGGACGATTCCAGGACCACCTTCAGCACTGTTCCTTCCAAGCCGTGCCCTGCCCTAACGAGAGCTGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS GCA 90 bp | CTCTGGTCCAAAAGCATCAGGGTCACCCTCTGCCTGAACGGCCACTaGAGCAGCGAGTCAAACTCACCGCGCATCACCACAAAGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LWSKSIRVTLCLNGH*SSESNSPRITTKYR Trigger: CCTGTACTTTGTGGTGATGCGCGGTGAGTTTGACTCGCTGCTGCAGTGGCCGTTCAGGCAGAGGGTGACCCTGATGCTTTTGGACCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS-3UTR CAA 90 bp | AGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGGGACAGCCACACCTTCTTAAAGGGACAGTCTaGCTCAGCCTCAGGACATAC | + |
|
Preference number: 5 (lower is better) Translates to: RTRACSVQRAAPKGQPHLLKGTV*LSLRTY Trigger: GTATGTCCTGAGGCTGAGCAAGACTGTCCCTTTAAG...AAGGTGTGGCTGTCCCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS-3UTR CAA 90 bp | GAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGGCTGTTGGGGTCAGCTTaGAAGGTCTCCACAATATGG | + |
|
Preference number: 5 (lower is better) Translates to: EAGRQEQEPAQSRGLRPRLLGSA*KVSTIW Trigger: CCATATTGTGGAGACCTTCAAAGCTGACCCCAACAG...CCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS-3UTR CAA 90 bp | ATCAGACATCGGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTCGCCATCTGGCCTTTaGAAGCTGCTGCTGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: IRHRRQEDKNKSLLSPEGSPSGL*KLLLLG Trigger: CCCCAACAGCAGCAGCTTCAAAAGGCCAGATGGCGA...GCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCGATGTCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CCA 90 bp | GGGTCAGCTTTGAAGGTCTCCACAATATGGTTCTTCTTGCCGCTCTaGTCCAAAAGCATCAGGGTCACCCTCTGCCTGAACGGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSALKVSTIWFFLPL*SKSIRVTLCLNGHC Trigger: GCAGTGGCCGTTCAGGCAGAGGGTGACCCTGATGCTTTTGGACCAGAGCGGCAAGAAGAACCATATTGTGGAGACCTTCAAAGCTGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS-3UTR CAA 90 bp | AGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAGGGACAGTCCAAGGAAATTGAGTaGCCAGAGTTCTGGCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RKTRTRACSVQRAAPKGQSKEIE*PEFWRM Trigger: CATCCGCCAGAACTCTGGCAACTCAATTTCCTTGGA...CTGTCCCTTGGGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS-3UTR CAA 90 bp | CATCGGAGGCAGGAAGACAAGAACAAGAGCCTGCTCAGTCCAGAGGGCTGCGCCCAAAGTCCAAGGAAATaGAGTTGCCAGAGTTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HRRQEDKNKSLLSPEGCAQSPRK*SCQSSG Trigger: GCCAGAACTCTGGCAACTCAATTTCCTTGGACTTTG...GGCGCAGCCCTCTGGACTGAGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS TCA 90 bp | GCCGCACCTGCGCTTCCAGCCAAGCTGACTTGTCCGTGTGACTGGTaGGAGCCTGGACATTTGAGAGGAAAGTTCCATTTCTGCCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: AAPALPAKLTCPCDW*EPGHLRGKFHFCQT Trigger: TGTTTGGCAGAAATGGAACTTTCCTCTCAAATGTCCAGGCTCTCACCAGTCACACGGACAAGTCAGCTTGGCTGGAAGCGCAGGTGCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS GCA 90 bp | CTGTCAACCGCATCCACCAAAGACCTCAGATCAAGTCGACTTGGCTaGTGGTTAACTATTTGTAGCAGCTGCCGCACCTGCGCTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSTASTKDLRSSRLG*WLTICSSCRTCASS Trigger: GCTGGAAGCGCAGGTGCGGCAGCTGCTACAAATAGTTAACCAGCAGCCAAGTCGACTTGATCTGAGGTCTTTGGTGGATGCGGTTGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS GCA 90 bp | GGCGCCCTCCAGCTGCTTAAACCGCTCTTCGTTCTTATTCAGCTGTaGTTTGTGGATATTAATGTGTGCGTCGTGCTTGCTGGTCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GALQLLKPLFVLIQL*FVDINVCVVLAGLP Trigger: GGGGAGACCAGCAAGCACGACGCACACATTAATATCCACAAAGCACAGCTGAATAAGAACGAAGAGCGGTTTAAGCAGCTGGAGGGCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CCA 90 bp | TCAACCGCATCCACCAAAGACCTCAGATCAAGTCGACTTGGCTGCTaGTTAACTATTTGTAGCAGCTGCCGCACCTGCGCTTCCAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: STASTKDLRSSRLGC*LTICSSCRTCASSQ Trigger: TTGGCTGGAAGCGCAGGTGCGGCAGCTGCTACAAATAGTTAACCAGCAGCCAAGTCGACTTGATCTGAGGTCTTTGGTGGATGCGGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CCA 90 bp | CCTAGCTCTTGGAATAGTCTGCACACACCTGTTGGGACAAGACACTaGGTACGCAGGACACGAGTTTTCCTCATGATCCTGCAGGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSSWNSLHTPVGTRH*VRRTRVFLMILQVG Trigger: ACCAACCTGCAGGATCATGAGGAAAACTCGTGTCCTGCGTACCCAGTGTCTTGTCCCAACAGGTGTGTGCAGACTATTCCAAGAGCTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CCA 90 bp | GTCTCCCCCTCTAAAAGAACTAATCTCTGGTCACTGGCTTCCAGCTaGGTGATCCTCTGTTTCACGCTGTCAACCGCATCCACCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VSPSKRTNLWSLASS*VILCFTLSTASTKD Trigger: GTCTTTGGTGGATGCGGTTGACAGCGTGAAACAGAGGATCACCCAGCTGGAAGCCAGTGACCAGAGATTAGTTCTTTTAGAGGGGGAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS-3UTR CAA 90 bp | CGCCCAAGGGACAGCCACACCTTTTCCTGTGCTGAGAAGTTTCCTTATCAGGTAAGAATAATCCTGGCATaGCACCCGGGGGCGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RPRDSHTFSCAEKFPYQVRIILA*HPGAFL Trigger: CAAAAACGCCCCCGGGTGCAATGCCAGGATTATTCT...TACCTGATAAGGAAACTTCTCAGCACAGGAAAAGGTGTGGCTGTCCCTTGGGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS GCA 90 bp | AGTTTTCCTCATGATCCTGCAGGTTGGTCACCACTATGTCCCTTTTaGAGTAAAGGCACTTCTCCTCTCGGAACCGGCAGTATGCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFPHDPAGWSPLCPF*SKGTSPLGTGSMRS Trigger: TGAGCGCATACTGCCGGTTCCGAGAGGAGAAGTGCCTTTACTGCAAAAGGGACATAGTGGTGACCAACCTGCAGGATCATGAGGAAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS GCA 90 bp | GGACATACAGTAAGGTGTTCATTCACCCTAGCTCTTGGAATAGTCTaGACACACCTGTTGGGACAAGACACTGGGTACGCAGGACACGAG | + |
|
Preference number: 5 (lower is better) Translates to: GHTVRCSFTLALGIV*THLLGQDTGYAGHE Trigger: CTCGTGTCCTGCGTACCCAGTGTCTTGTCCCAACAGGTGTGTGCAGACTATTCCAAGAGCTAGGGTGAATGAACACCTTACTGTATGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CCA 90 bp | ACACTGGGTACGCAGGACACGAGTTTTCCTCATGATCCTGCAGGTTaGTCACCACTATGTCCCTTTTGCAGTAAAGGCACTTCTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLGTQDTSFPHDPAG*SPLCPFCSKGTSPL Trigger: GAGAGGAGAAGTGCCTTTACTGCAAAAGGGACATAGTGGTGACCAACCTGCAGGATCATGAGGAAAACTCGTGTCCTGCGTACCCAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS-3UTR CAA 90 bp | AAAAAGATGACACATCAGACATCGGAGGCAGGAAGACAAGAACAAGAGCCTGCTGCCAGCTGCTGGATCTaGCTTTCCTTCTGTTCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KKMTHQTSEAGRQEQEPAASCWI*LSFCSR Trigger: TCTCGAACAGAAGGAAAGCAAGATCCAGCAGCTGGC...AGCAGGCTCTTGTTCTTGTCTTCCTGCCTCCGATGTCTGATGTGTCATCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CCA 90 bp | TCCAGCTGCTTAAACCGCTCTTCGTTCTTATTCAGCTGTGCTTTGTaGATATTAATGTGTGCGTCGTGCTTGCTGGTCTCCCCCTCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSCLNRSSFLFSCAL*ILMCASCLLVSPSK Trigger: TTTAGAGGGGGAGACCAGCAAGCACGACGCACACATTAATATCCACAAAGCACAGCTGAATAAGAACGAAGAGCGGTTTAAGCAGCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS GCA 90 bp | GCTCCTTTTCGAACTTCTTCACGGTTTCTGCCAGCTGCTGGATCTTaGTTTCCTTCTGTTCGAGACTCTGATATAAATCAGAGATCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: APFRTSSRFLPAAGS*FPSVRDSDINQRSA Trigger: AGCGGATCTCTGATTTATATCAGAGTCTCGAACAGAAGGAAAGCAAGATCCAGCAGCTGGCAGAAACCGTGAAGAAGTTCGAAAAGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS GCA 90 bp | TCGTTCTTATTCAGCTGTGCTTTGTGGATATTAATGTGTGCGTCGTaGTTGCTGGTCTCCCCCTCTAAAAGAACTAATCTCTGGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SFLFSCALWILMCAS*LLVSPSKRTNLWSL Trigger: CAGTGACCAGAGATTAGTTCTTTTAGAGGGGGAGACCAGCAAGCACGACGCACACATTAATATCCACAAAGCACAGCTGAATAAGAACGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CAA 72 bp | GGCTTCCCGGCAGCTCTCGTTAGGGCAGGGCACGGCTaGGAAGGAACAGTGCTGAAGGTGGTCCTGGAATCG | + |
|
Preference number: 6 (lower is better) Translates to: GFPAALVRAGHG*EGTVLKVVLES Trigger: CGATTCCAGGACCACCTTCAGCACTGTTCCTTCCAAGCCGTGCCCTGCCCTAACGAGAGCTGCCGGGAAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CAA 90 bp | CCGGAGCATGGCTTCCCGGCAGCTCTCGTTAGGGCAGGGCACGGCTaGGAAGGAACAGTGCTGAAGGTGGTCCTGGAATCGTCCCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: PEHGFPAALVRAGHG*EGTVLKVVLESSQN Trigger: ATTCTGGGACGATTCCAGGACCACCTTCAGCACTGTTCCTTCCAAGCCGTGCCCTGCCCTAACGAGAGCTGCCGGGAAGCCATGCTCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS TCA 72 bp | CGCTCTGGTCCAAAAGCATCAGGGTCACCCTCTGCCTaGACGGCCACTGCAGCAGCGAGTCAAACTCACCGC | + |
|
Preference number: 6 (lower is better) Translates to: RSGPKASGSPSA*TATAAASQTHR Trigger: GCGGTGAGTTTGACTCGCTGCTGCAGTGGCCGTTCAGGCAGAGGGTGACCCTGATGCTTTTGGACCAGAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS GCA 72 bp | AGATCGGCACCGAGTTCAATTCTCTCAGAGACCGGATaGACTGCTGGCAGAAGCGGTGCCCGCAGCCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSAPSSILSETG*TAGRSGARSRS Trigger: AGACCGGCTGCGGGCACCGCTTCTGCCAGCAGTGCATCCGGTCTCTGAGAGAATTGAACTCGGTGCCGATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS GCA 72 bp | AAAAGCATCAGGGTCACCCTCTGCCTGAACGGCCACTaGAGCAGCGAGTCAAACTCACCGCGCATCACCACA | + |
|
Preference number: 6 (lower is better) Translates to: KSIRVTLCLNGH*SSESNSPRITT Trigger: TGTGGTGATGCGCGGTGAGTTTGACTCGCTGCTGCAGTGGCCGTTCAGGCAGAGGGTGACCCTGATGCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS GCA 72 bp | TTGCCGCTCTGGTCCAAAAGCATCAGGGTCACCCTCTaGCTGAACGGCCACTGCAGCAGCGAGTCAAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: LPLWSKSIRVTL*LNGHCSSESNS Trigger: TGAGTTTGACTCGCTGCTGCAGTGGCCGTTCAGGCAGAGGGTGACCCTGATGCTTTTGGACCAGAGCGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CCA 72 bp | GGCTCAAAGTCCAAGGAAATTGAGTTGCCAGAGTTCTaGCGGATGAAGGCGCAGGGGACAGCCGCTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSKSKEIELPEF*RMKAQGTAACS Trigger: GGAGCAAGCGGCTGTCCCCTGCGCCTTCATCCGCCAGAACTCTGGCAACTCAATTTCCTTGGACTTTGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CAA 90 bp | ACAAACTGGTACTCGGTGTCGGGCTCAAAGTCCAAGGAAATTGAGTaGCCAGAGTTCTGGCGGATGAAGGCGCAGGGGACAGCCGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: TNWYSVSGSKSKEIE*PEFWRMKAQGTAAC Trigger: GCAAGCGGCTGTCCCCTGCGCCTTCATCCGCCAGAACTCTGGCAACTCAATTTCCTTGGACTTTGAGCCCGACACCGAGTACCAGTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS TCA 72 bp | AGTCCAAGGAAATTGAGTTGCCAGAGTTCTGGCGGATaGAGGCGCAGGGGACAGCCGCTTGCTCCTCCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: SPRKLSCQSSGG*RRRGQPLAPPN Trigger: ATTCGGAGGAGCAAGCGGCTGTCCCCTGCGCCTTCATCCGCCAGAACTCTGGCAACTCAATTTCCTTGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS TCA 72 bp | TCGTTAGGGCAGGGCACGGCTTGGAAGGAACAGTGCTaGAGGTGGTCCTGGAATCGTCCCAGAATAATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLGQGTAWKEQC*RWSWNRPRIIL Trigger: CAGGATTATTCTGGGACGATTCCAGGACCACCTTCAGCACTGTTCCTTCCAAGCCGTGCCCTGCCCTAACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS TCA 72 bp | CGCACCTGCGCTTCCAGCCAAGCTGACTTGTCCGTGTaGCTGGTGAGAGCCTGGACATTTGAGAGGAAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RTCASSQADLSV*LVRAWTFERKV Trigger: AACTTTCCTCTCAAATGTCCAGGCTCTCACCAGTCACACGGACAAGTCAGCTTGGCTGGAAGCGCAGGTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS GCA 72 bp | GCAGTAAAGGCACTTCTCCTCTCGGAACCGGCAGTATaGGCTCAGGTGCTCTTTCACGTCTTTCCGGAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: AVKALLLSEPAV*AQVLFHVFPEH Trigger: ATGCTCCGGAAAGACGTGAAAGAGCACCTGAGCGCATACTGCCGGTTCCGAGAGGAGAAGTGCCTTTACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS GCA 72 bp | AGTCGACTTGGCTGCTGGTTAACTATTTGTAGCAGCTaGCGCACCTGCGCTTCCAGCCAAGCTGACTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRLGCWLTICSS*RTCASSQADLS Trigger: GGACAAGTCAGCTTGGCTGGAAGCGCAGGTGCGGCAGCTGCTACAAATAGTTAACCAGCAGCCAAGTCGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CAA 72 bp | TACTCGGTGTCGGGCTCAAAGTCCAAGGAAATTGAGTaGCCAGAGTTCTGGCGGATGAAGGCGCAGGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: YSVSGSKSKEIE*PEFWRMKAQGT Trigger: TGTCCCCTGCGCCTTCATCCGCCAGAACTCTGGCAACTCAATTTCCTTGGACTTTGAGCCCGACACCGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CAA 90 bp | CTGCTGTTGGGGTCAGCTTTGAAGGTCTCCACAATATGGTTCTTCTaGCCGCTCTGGTCCAAAAGCATCAGGGTCACCCTCTGCCTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LLLGSALKVSTIWFF*PLWSKSIRVTLCLN Trigger: GTTCAGGCAGAGGGTGACCCTGATGCTTTTGGACCAGAGCGGCAAGAAGAACCATATTGTGGAGACCTTCAAAGCTGACCCCAACAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS GCA 72 bp | CATGATCCTGCAGGTTGGTCACCACTATGTCCCTTTTaGAGTAAAGGCACTTCTCCTCTCGGAACCGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: HDPAGWSPLCPF*SKGTSPLGTGS Trigger: ACTGCCGGTTCCGAGAGGAGAAGTGCCTTTACTGCAAAAGGGACATAGTGGTGACCAACCTGCAGGATCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CCA 72 bp | TCCACCAAAGACCTCAGATCAAGTCGACTTGGCTGCTaGTTAACTATTTGTAGCAGCTGCCGCACCTGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: STKDLRSSRLGC*LTICSSCRTCA Trigger: AGCGCAGGTGCGGCAGCTGCTACAAATAGTTAACCAGCAGCCAAGTCGACTTGATCTGAGGTCTTTGGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CAA 72 bp | GGGTCAGCTTTGAAGGTCTCCACAATATGGTTCTTCTaGCCGCTCTGGTCCAAAAGCATCAGGGTCACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GSALKVSTIWFF*PLWSKSIRVTL Trigger: GAGGGTGACCCTGATGCTTTTGGACCAGAGCGGCAAGAAGAACCATATTGTGGAGACCTTCAAAGCTGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CAA 90 bp | CCGCTTACCCTTGACAGTGCAGCCATAGTGCTTAAAGGGACAGTCTaGCTCAGCCTCAGGACATACAGTAAGGTGTTCATTCACCCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLTLDSAAIVLKGTV*LSLRTYSKVFIHPS Trigger: GCTAGGGTGAATGAACACCTTACTGTATGTCCTGAGGCTGAGCAAGACTGTCCCTTTAAGCACTATGGCTGCACTGTCAAGGGTAAGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CAA 90 bp | CCCTCCAGCTGCTTAAACCGCTCTTCGTTCTTATTCAGCTGTGCTTaGTGGATATTAATGTGTGCGTCGTGCTTGCTGGTCTCCCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSSCLNRSSFLFSCA*WILMCASCLLVSPS Trigger: AGAGGGGGAGACCAGCAAGCACGACGCACACATTAATATCCACAAAGCACAGCTGAATAAGAACGAAGAGCGGTTTAAGCAGCTGGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS TCA 72 bp | CAAGACACTGGGTACGCAGGACACGAGTTTTCCTCATaGTCCTGCAGGTTGGTCACCACTATGTCCCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QDTGYAGHEFSS*SCRLVTTMSLL Trigger: CAAAAGGGACATAGTGGTGACCAACCTGCAGGATCATGAGGAAAACTCGTGTCCTGCGTACCCAGTGTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CCA 72 bp | TGGAATAGTCTGCACACACCTGTTGGGACAAGACACTaGGTACGCAGGACACGAGTTTTCCTCATGATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: WNSLHTPVGTRH*VRRTRVFLMIL Trigger: CAGGATCATGAGGAAAACTCGTGTCCTGCGTACCCAGTGTCTTGTCCCAACAGGTGTGTGCAGACTATTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
||
| CDS CCA 72 bp | TTGAAGGTCTCCACAATATGGTTCTTCTTGCCGCTCTaGTCCAAAAGCATCAGGGTCACCCTCTGCCTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LKVSTIWFFLPL*SKSIRVTLCLN Trigger: GTTCAGGCAGAGGGTGACCCTGATGCTTTTGGACCAGAGCGGCAAGAAGAACCATATTGTGGAGACCTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS CCA 72 bp | CTGCTGTTGGGGTCAGCTTTGAAGGTCTCCACAATATaGTTCTTCTTGCCGCTCTGGTCCAAAAGCATCAGG | + |
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Preference number: 6 (lower is better) Translates to: LLLGSALKVSTI*FFLPLWSKSIR Trigger: CCTGATGCTTTTGGACCAGAGCGGCAAGAAGAACCATATTGTGGAGACCTTCAAAGCTGACCCCAACAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS GCA 72 bp | GTAAGGTGTTCATTCACCCTAGCTCTTGGAATAGTCTaGACACACCTGTTGGGACAAGACACTGGGTACGCA | + |
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Preference number: 6 (lower is better) Translates to: VRCSFTLALGIV*THLLGQDTGYA Trigger: TGCGTACCCAGTGTCTTGTCCCAACAGGTGTGTGCAGACTATTCCAAGAGCTAGGGTGAATGAACACCTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS CCA 72 bp | ACGCAGGACACGAGTTTTCCTCATGATCCTGCAGGTTaGTCACCACTATGTCCCTTTTGCAGTAAAGGCACT | + |
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Preference number: 6 (lower is better) Translates to: TQDTSFPHDPAG*SPLCPFCSKGT Trigger: AGTGCCTTTACTGCAAAAGGGACATAGTGGTGACCAACCTGCAGGATCATGAGGAAAACTCGTGTCCTGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS CCA 72 bp | TCTAAAAGAACTAATCTCTGGTCACTGGCTTCCAGCTaGGTGATCCTCTGTTTCACGCTGTCAACCGCATCC | + |
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Preference number: 6 (lower is better) Translates to: SKRTNLWSLASS*VILCFTLSTAS Trigger: GGATGCGGTTGACAGCGTGAAACAGAGGATCACCCAGCTGGAAGCCAGTGACCAGAGATTAGTTCTTTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS CAA 72 bp | CTTGACAGTGCAGCCATAGTGCTTAAAGGGACAGTCTaGCTCAGCCTCAGGACATACAGTAAGGTGTTCATT | + |
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Preference number: 6 (lower is better) Translates to: LDSAAIVLKGTV*LSLRTYSKVFI Trigger: AATGAACACCTTACTGTATGTCCTGAGGCTGAGCAAGACTGTCCCTTTAAGCACTATGGCTGCACTGTCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS CAA 90 bp | TTCTTATTCAGCTGTGCTTTGTGGATATTAATGTGTGCGTCGTGCTaGCTGGTCTCCCCCTCTAAAAGAACTAATCTCTGGTCACTGGCT | + |
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Preference number: 6 (lower is better) Translates to: FLFSCALWILMCASC*LVSPSKRTNLWSLA Trigger: AGCCAGTGACCAGAGATTAGTTCTTTTAGAGGGGGAGACCAGCAAGCACGACGCACACATTAATATCCACAAAGCACAGCTGAATAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS GCA 72 bp | CGAACTTCTTCACGGTTTCTGCCAGCTGCTGGATCTTaGTTTCCTTCTGTTCGAGACTCTGATATAAATCAG | + |
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Preference number: 6 (lower is better) Translates to: RTSSRFLPAAGS*FPSVRDSDINQ Trigger: CTGATTTATATCAGAGTCTCGAACAGAAGGAAAGCAAGATCCAGCAGCTGGCAGAAACCGTGAAGAAGTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS CCA 72 bp | TTAAACCGCTCTTCGTTCTTATTCAGCTGTGCTTTGTaGATATTAATGTGTGCGTCGTGCTTGCTGGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LNRSSFLFSCAL*ILMCASCLLVS Trigger: GGAGACCAGCAAGCACGACGCACACATTAATATCCACAAAGCACAGCTGAATAAGAACGAAGAGCGGTTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS CAA 72 bp | TGCTTAAACCGCTCTTCGTTCTTATTCAGCTGTGCTTaGTGGATATTAATGTGTGCGTCGTGCTTGCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: CLNRSSFLFSCA*WILMCASCLLV Trigger: GACCAGCAAGCACGACGCACACATTAATATCCACAAAGCACAGCTGAATAAGAACGAAGAGCGGTTTAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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| CDS GCA 72 bp | AGGAAAGTTCCATTTCTGCCAAACATCTGTGTGAACTaGTTAAGCTCCTTTTCGAACTTCTTCACGGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: RKVPFLPNICVN*LSSFSNFFTVS Trigger: AGAAACCGTGAAGAAGTTCGAAAAGGAGCTTAAGCAGTTCACACAGATGTTTGGCAGAAATGGAACTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195815.3 |
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