Pregenerated sensors for TRAF4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017386Ensembl transcript IDs: ENSMUST00000017530.4
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCAGCATCAAGGCATGTCTaGCCTGCCCAGGAGGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LKADSSNYPYPSLCQYLPASRHV*PAQEGR Trigger: TCTCCCCTCCTGGGCAGGGCAGACATGCCTTGATGC...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| 3UTR-3UTR CCA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCACAGGTAGAATGTGGCTaGCATCAAGGCATGTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: LKADSSNYPYPSLCQYLPQVECG*HQGMSA Trigger: GGCAGACATGCCTTGATGCCAGCCACATTCTACCTG...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| 3UTR TCA 72 bp | CCAGGGGCCAGGGCTGAAGCACCAATTGGAGGCACCTaGGGGGTAGGGATGGTGGTGGTGGTGGTGGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PGARAEAPIGGT*GVGMVVVVVVV Trigger: CACCACCACCACCACCACCACCATCCCTACCCCTCAGGTGCCTCCAATTGGTGCTTCAGCCCTGGCCCCTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCGGGCTTCCCGCACAGTaGGCACAGCAGCCGCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPGLPAQ*AQQPPL Trigger: AAGCGGCGGCTGCTGTGCCCACTGTGCGGGAAGCCC...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCCAGTCGTGCTGCAGGTaGGCAGGCAGGTCACGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPQSCCR*AGRSRR Trigger: CCGGCGTGACCTGCCTGCCCACCTGCAGCACGACTG...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCCCGGCTCAGCTTGGCTaGGCAGCGATTAGGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPPAQLG*AAIRAG Trigger: CCCTGCCCTAATCGCTGCCCAGCCAAGCTGAGCCGG...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR GCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCGGGAGCCTCGCCACGTaGCGGGCTTCTGGAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPGSLAT*RASGSS Trigger: AGAACTTCCAGAAGCCCGGCACGTGGCGAGGCTCCC...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCGGGAACAGGCAGGCGTaGGCACTGGTACTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPGNRQA*ALVLVA Trigger: AGCCACCAGTACCAGTGCCCACGCCTGCCTGTTCCC...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR TCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCAAGTGGCCCTGTAGATaGCGAAGTGGCCCGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPKWPCR*RSGPLQ Trigger: CTGGAGCGGGCCACTTCGTCATCTACAGGGCCACTT...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR GCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCTTAGGGCAGTCGTGCTaGAGGTGGGCAGGCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPLGQSC*RWAGRS Trigger: TGACCTGCCTGCCCACCTGCAGCACGACTGCCCTAA...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCAGCACAGGCTCGCGCATaGGCTTCCCGCACAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKADSSNYPYPSLCQYLPAQARA*ASRTVG Trigger: GCCCACTGTGCGGGAAGCCCATGCGCGAGCCTGTGC...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCTGGGGCACTCAGACGTaGCATGCTGGGCCAACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPWGTQT*HAGPTV Trigger: GACTGTTGGCCCAGCATGCCACGTCTGAGTGCCCCA...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCGTGCCCACTCCACATTaGTTGGGGCAGGGAACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPVPTPH*LGQGTG Trigger: GCCTGTTCCCTGCCCCAACCAATGTGGAGTGGGCAC...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR TCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCCGACAGAGGCACGGATaGAAACCGCATCATCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPRQRHG*KPHHPA Trigger: TGCGGGATGATGCGGTTTTCATCCGTGCCTCTGTCG...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR GCA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCACGCTTAGGGCAGTCGTaGTGCAGGTGGGCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKADSSNYPYPSLCQYLPRLGQS*CRWAGR Trigger: CCTGCCTGCCCACCTGCAGCACGACTGCCCTAAGCG...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCACAGCAGCCGCCGCTTaGGCTTCTCCAGGAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPTAAAA*ASPGTC Trigger: ACAAGTTCCTGGAGAAGCCCAAGCGGCGGCTGCTGT...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCCTGGACCTCCAGCTCTaGGTCTGGGTAGATCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPLDLQL*VWVDLG Trigger: GCCAAGATCTACCCAGACCCAGAGCTGGAGGTCCAG...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR TCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCTGTCCTGGTGGGAAATaGACTTGGGGTAGCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPCPGGK*TWGSRS Trigger: GCTTCGGCTACCCCAAGTTCATTTCCCACCAGGACA...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCAAGGGCTGGGTGCGCTTaGGGCACTCAGACGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKADSSNYPYPSLCQYLPRAGCA*GTQTWH Trigger: ATGCCACGTCTGAGTGCCCCAAGCGCACCCAGCCCT...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCAGGCAGGCGTGGGCACTaGTACTGGTGGCTCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LKADSSNYPYPSLCQYLPGRRGH*YWWLWM Trigger: CATCCAGAGCCACCAGTACCAGTGCCCACGCCTGCC...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR GCA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCACCACAAGTAGACACCTaGACAGGCTCGCGCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKADSSNYPYPSLCQYLPPQVDT*TGSRMG Trigger: GCCCATGCGCGAGCCTGTGCAGGTGTCTACTTGTGG...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR GCA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCACTTCCCGGGCCACAGTaGCCACTCCACATTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKADSSNYPYPSLCQYLPLPGPQ*PLHIGW Trigger: CCAACCAATGTGGAGTGGGCACTGTGGCCCGGGAAG...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR GCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCAGCTTAGGGCACCTGTaGTTGCAGCCAGACTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPSLGHL*LQPDSL Trigger: CAAAGAGTCTGGCTGCAAGCACAGGTGCCCTAAGCT...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCCTCCAGCTCTGGGTCTaGGTAGATCTTGGCATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPLQLWV*VDLGIV Trigger: GACTATGCCAAGATCTACCCAGACCCAGAGCTGGAG...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCACCACTCCACATTGGTTaGGGCAGGGAACAGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKADSSNYPYPSLCQYLPPLHIG*GREQAG Trigger: GCCTGCCTGTTCCCTGCCCCAACCAATGTGGAGTGG...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCTGGCTTAGCCAAACCTaGGTCACTCTGATCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPWLSQT*VTLIQQ Trigger: CTGCTGGATCAGAGTGACCCAGGTTTGGCTAAGCCA...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCCTCAGTGACATGCTGTaGCTTAGCCAAACCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPLSDML*LSQTWV Trigger: GACCCAGGTTTGGCTAAGCCACAGCATGTCACTGAG...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR TCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCGGCAGGGGACTACATTaGAGCTGCAAGTGTTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPGRGLH*SCKCSS Trigger: ACTTGAACACTTGCAGCTTCAATGTAGTCCCCTGCC...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCACAGCCCTCCTCACTGTaGATGCAGCGGATAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKADSSNYPYPSLCQYLPQPSSL*MQRIAK Trigger: CTTGGCTATCCGCTGCATCCACAGTGAGGAGGGCTG...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCACGTGGGCACTGGTACTaGTGGCTCTGGATGGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKADSSNYPYPSLCQYLPRGHWY*WLWMVS Trigger: TGACACCATCCAGAGCCACCAGTACCAGTGCCCACG...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCCATCATAGCCAGATGTaGCTTTACGCTCTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPHHSQM*LYALLH Trigger: GTGGAGGAGAGCGTAAAGCCACATCTGGCTATGATG...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR TCA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCACGTAGGCCTCCCCACTaGAGTCACAGCCACAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LKADSSNYPYPSLCQYLPRRPPH*SHSHRI Trigger: AATTCTGTGGCTGTGACTTCAGTGGGGAGGCCTACG...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR GCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCAGAGAACAAAGGCAGTaGTGCAGCTATCCTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPREQRQ*CSYPSD Trigger: ATCTGAAGGATAGCTGCAGCACTGCCTTTGTTCTCT...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCAAGACACGGATGTAGATaGAGAGGTGTGTGCCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKADSSNYPYPSLCQYLPRHGCR*RGVCPH Trigger: GTGAGGGCACACACCTCTCCATCTACATCCGTGTCT...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCACACGTGCCGGGCTTCTaGAAGTTCTTCCAGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKADSSNYPYPSLCQYLPHVPGF*KFFQFG Trigger: TCCAAACTGGAAGAACTTCCAGAAGCCCGGCACGTG...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCCATAAACAAATTCCTTaGTACAGTAGGCACAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AKEAERRSGPQSSFRSSPHKQIP*YSRHRA Trigger: AGCCCTGTGCCTACTGTACCAAGGAATTTGTTTATG...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS GCA 90 bp | TCCTGCAGGCAGGTGTCGCAGAAGCGGTGGCCACAAGTAGACACCTaGACAGGCTCGCGCATGGGCTTCCCGCACAGTGGGCACAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCRQVSQKRWPQVDT*TGSRMGFPHSGHSS Trigger: GCTGCTGTGCCCACTGTGCGGGAAGCCCATGCGCGAGCCTGTGCAGGTGTCTACTTGTGGCCACCGCTTCTGCGACACCTGCCTGCAGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS GCA 90 bp | CAGCCACAGAATTCACACTTGAGGCGGCGCTTAGGGCAGTCGTGCTaGAGGTGGGCAGGCAGGTCACGCCGGCTCAGCTTGGCTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QPQNSHLRRRLGQSC*RWAGRSRRLSLAGQ Trigger: CTGCCCAGCCAAGCTGAGCCGGCGTGACCTGCCTGCCCACCTGCAGCACGACTGCCCTAAGCGCCGCCTCAAGTGTGAATTCTGTGGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS GCA 90 bp | TCACAGCCACAGAATTCACACTTGAGGCGGCGCTTAGGGCAGTCGTaGTGCAGGTGGGCAGGCAGGTCACGCCGGCTCAGCTTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQPQNSHLRRRLGQS*CRWAGRSRRLSLAG Trigger: CCCAGCCAAGCTGAGCCGGCGTGACCTGCCTGCCCACCTGCAGCACGACTGCCCTAAGCGCCGCCTCAAGTGTGAATTCTGTGGCTGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CCA 90 bp | CAGAATTCACACTTGAGGCGGCGCTTAGGGCAGTCGTGCTGCAGGTaGGCAGGCAGGTCACGCCGGCTCAGCTTGGCTGGGCAGCGATTA | + |
|
Preference number: 5 (lower is better) Translates to: QNSHLRRRLGQSCCR*AGRSRRLSLAGQRL Trigger: TAATCGCTGCCCAGCCAAGCTGAGCCGGCGTGACCTGCCTGCCCACCTGCAGCACGACTGCCCTAAGCGCCGCCTCAAGTGTGAATTCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CCA 90 bp | ACAAGTAGACACCTGCACAGGCTCGCGCATGGGCTTCCCGCACAGTaGGCACAGCAGCCGCCGCTTGGGCTTCTCCAGGAACTTGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TSRHLHRLAHGLPAQ*AQQPPLGLLQELVV Trigger: GACTACAAGTTCCTGGAGAAGCCCAAGCGGCGGCTGCTGTGCCCACTGTGCGGGAAGCCCATGCGCGAGCCTGTGCAGGTGTCTACTTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CCA 90 bp | GTCGTGCTGCAGGTGGGCAGGCAGGTCACGCCGGCTCAGCTTGGCTaGGCAGCGATTAGGGCAGGGGACTACATTGAAGCTGCAAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VVLQVGRQVTPAQLG*AAIRAGDYIEAASV Trigger: AACACTTGCAGCTTCAATGTAGTCCCCTGCCCTAATCGCTGCCCAGCCAAGCTGAGCCGGCGTGACCTGCCTGCCCACCTGCAGCACGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CCA 90 bp | ACTCCTTCACTGAGAAACTCCTGCAGGCAGGTGTCGCAGAAGCGGTaGCCACAAGTAGACACCTGCACAGGCTCGCGCATGGGCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TPSLRNSCRQVSQKR*PQVDTCTGSRMGFP Trigger: CGGGAAGCCCATGCGCGAGCCTGTGCAGGTGTCTACTTGTGGCCACCGCTTCTGCGACACCTGCCTGCAGGAGTTTCTCAGTGAAGGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS GCA 90 bp | GGTAGCCGAAGCCCAGAGAACTCTCATCCAGGGAGCCTCGCCACGTaGCGGGCTTCTGGAAGTTCTTCCAGTTTGGATCAGGGTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSRSPENSHPGSLAT*RASGSSSSLDQGGR Trigger: CCTTCCACCCTGATCCAAACTGGAAGAACTTCCAGAAGCCCGGCACGTGGCGAGGCTCCCTGGATGAGAGTTCTCTGGGCTTCGGCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CAA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCCCCACTCCACATTGGTaGGGGCAGGGAACAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AKEAERRSGPQSSFRSSPPTPHW*GQGTGR Trigger: CCTGCCTGTTCCCTGCCCCAACCAATGTGGAGTGGG...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS GCA 90 bp | TGGTGTCATAAACAAATTCCTTGGTACAGTAGGCACAGGGCTGGGTaGGCTTGGGGCACTCAGACGTGGCATGCTGGGCCAACAGTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: WCHKQIPWYSRHRAG*AWGTQTWHAGPTVA Trigger: GGCGACTGTTGGCCCAGCATGCCACGTCTGAGTGCCCCAAGCGCACCCAGCCCTGTGCCTACTGTACCAAGGAATTTGTTTATGACACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CCA 90 bp | CATAAACAAATTCCTTGGTACAGTAGGCACAGGGCTGGGTGCGCTTaGGGCACTCAGACGTGGCATGCTGGGCCAACAGTCGCCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: HKQIPWYSRHRAGCA*GTQTWHAGPTVASS Trigger: TGATGAGGCGACTGTTGGCCCAGCATGCCACGTCTGAGTGCCCCAAGCGCACCCAGCCCTGTGCCTACTGTACCAAGGAATTTGTTTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CAA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCATCACGCCGGCTCAGCTaGGCTGGGCAGCGATTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LKADSSNYPYPSLCQYLPSRRLS*AGQRLG Trigger: CCCTAATCGCTGCCCAGCCAAGCTGAGCCGGCGTGA...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CAA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCACAGCTCCTGCAGCTCTaGCCGCTGTCGGCTCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LKADSSNYPYPSLCQYLPQLLQL*PLSAHQ Trigger: CTGGTGAGCCGACAGCGGCAAGAGCTGCAGGAGCTG...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS GCA 90 bp | AGTTGGTCCTCAGGGCATTTGAAGACTCCTTCACTGAGAAACTCCTaGAGGCAGGTGTCGCAGAAGCGGTGGCCACAAGTAGACACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SWSSGHLKTPSLRNS*RQVSQKRWPQVDTC Trigger: GCAGGTGTCTACTTGTGGCCACCGCTTCTGCGACACCTGCCTGCAGGAGTTTCTCAGTGAAGGAGTCTTCAAATGCCCTGAGGACCAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CAA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCACACAGCAGCCGCCGCTaGGGCTTCTCCAGGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LKADSSNYPYPSLCQYLPHSSRR*GFSRNL Trigger: CAAGTTCCTGGAGAAGCCCAAGCGGCGGCTGCTGTG...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CAA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCGGGCAGGGGACTACATaGAAGCTGCAAGTGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: AKEAERRSGPQSSFRSSPGQGTT*KLQVFK Trigger: CTTGAACACTTGCAGCTTCAATGTAGTCCCCTGCCC...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CAA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCAAGTGCCCACTCCACATaGGTTGGGGCAGGGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LKADSSNYPYPSLCQYLPSAHST*VGAGNR Trigger: CCTGTTCCCTGCCCCAACCAATGTGGAGTGGGCACT...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CAA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCTGGTCCTCAGGGCATTaGAAGACTCCTTCACTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: AKEAERRSGPQSSFRSSPWSSGH*KTPSLR Trigger: TCTCAGTGAAGGAGTCTTCAAATGCCCTGAGGACCA...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CAA 90 bp | GCAAAAGAAGCTGAAAGGAGGTCCGGCCCCCAATCCAGTTTCAGATCCAGTCCCATAGTCCAGAGGAAGTaGGTCCTCAGGGCATTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: AKEAERRSGPQSSFRSSPIVQRK*VLRAFE Trigger: TTCAAATGCCCTGAGGACCAACTTCCTCTGGACTAT...GGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CAA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCAATGCGGGCCCCACACTaGTTCTCACAGTACACACTC | + |
|
Preference number: 5 (lower is better) Translates to: LKADSSNYPYPSLCQYLPMRAPH*FSQYTL Trigger: GAGTGTGTACTGTGAGAACAAGTGTGGGGCCCGCAT...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CAA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCATTAGGGCACCTGTGCTaGCAGCCAGACTCTTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LKADSSNYPYPSLCQYLPLGHLC*QPDSLK Trigger: TTTCAAAGAGTCTGGCTGCAAGCACAGGTGCCCTAA...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CAA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCAGGAAGTTCTTCCAGTTaGGATCAGGGTGGAAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LKADSSNYPYPSLCQYLPGSSSS*DQGGRS Trigger: AGACCTTCCACCCTGATCCAAACTGGAAGAACTTCC...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS-3UTR CAA 90 bp | CTCAAGGCAGATTCTTCTAACTACCCTTACCCCTCCCTTTGCCAATACCTCCCATTGCAGCCAGACTCTTaGAAAGGGCAGAGAACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LKADSSNYPYPSLCQYLPLQPDS*KGQRTK Trigger: CTTTGTTCTCTGCCCTTTCAAAGAGTCTGGCTGCAA...TGGGAGGTATTGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CCA 72 bp | CACTTGAGGCGGCGCTTAGGGCAGTCGTGCTGCAGGTaGGCAGGCAGGTCACGCCGGCTCAGCTTGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: HLRRRLGQSCCR*AGRSRRLSLAG Trigger: CCCAGCCAAGCTGAGCCGGCGTGACCTGCCTGCCCACCTGCAGCACGACTGCCCTAAGCGCCGCCTCAAGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS GCA 72 bp | CAGGGCTGGGTGCGCTTGGGGCACTCAGACGTGGCATaGTGGGCCAACAGTCGCCTCATCATGCGGGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QGWVRLGHSDVA*WANSRLIMRAP Trigger: TGGGGCCCGCATGATGAGGCGACTGTTGGCCCAGCATGCCACGTCTGAGTGCCCCAAGCGCACCCAGCCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CCA 72 bp | CACCTGCACAGGCTCGCGCATGGGCTTCCCGCACAGTaGGCACAGCAGCCGCCGCTTGGGCTTCTCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HLHRLAHGLPAQ*AQQPPLGLLQE Trigger: TTCCTGGAGAAGCCCAAGCGGCGGCTGCTGTGCCCACTGTGCGGGAAGCCCATGCGCGAGCCTGTGCAGGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CCA 72 bp | GGCTGGGTGCGCTTGGGGCACTCAGACGTGGCATGCTaGGCCAACAGTCGCCTCATCATGCGGGCCCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: GWVRLGHSDVAC*ANSRLIMRAPH Trigger: GTGTGGGGCCCGCATGATGAGGCGACTGTTGGCCCAGCATGCCACGTCTGAGTGCCCCAAGCGCACCCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS GCA 72 bp | CAGGTGTCGCAGAAGCGGTGGCCACAAGTAGACACCTaGACAGGCTCGCGCATGGGCTTCCCGCACAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: QVSQKRWPQVDT*TGSRMGFPHSG Trigger: CCCACTGTGCGGGAAGCCCATGCGCGAGCCTGTGCAGGTGTCTACTTGTGGCCACCGCTTCTGCGACACCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS GCA 72 bp | CAGAATTCACACTTGAGGCGGCGCTTAGGGCAGTCGTaGTGCAGGTGGGCAGGCAGGTCACGCCGGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QNSHLRRRLGQS*CRWAGRSRRLS Trigger: GCTGAGCCGGCGTGACCTGCCTGCCCACCTGCAGCACGACTGCCCTAAGCGCCGCCTCAAGTGTGAATTCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CCA 72 bp | TGGGCTTCCCGCACAGTGGGCACAGCAGCCGCCGCTTaGGCTTCTCCAGGAACTTGTAGTCGAAGCCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WASRTVGTAAAA*ASPGTCSRSRA Trigger: TGCCCGGCTTCGACTACAAGTTCCTGGAGAAGCCCAAGCGGCGGCTGCTGTGCCCACTGTGCGGGAAGCCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CCA 72 bp | CGAAGTGGCCCGCTCCAGCGGCAGCCCTCCTCACTGTaGATGCAGCGGATAGCCAAGCCTAACACCTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: RSGPLQRQPSSL*MQRIAKPNTWT Trigger: GGTCCAGGTGTTAGGCTTGGCTATCCGCTGCATCCACAGTGAGGAGGGCTGCCGCTGGAGCGGGCCACTTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CAA 72 bp | TGCTGCAGGTGGGCAGGCAGGTCACGCCGGCTCAGCTaGGCTGGGCAGCGATTAGGGCAGGGGACTACATTG | + |
|
Preference number: 6 (lower is better) Translates to: CCRWAGRSRRLS*AGQRLGQGTTL Trigger: CAATGTAGTCCCCTGCCCTAATCGCTGCCCAGCCAAGCTGAGCCGGCGTGACCTGCCTGCCCACCTGCAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CAA 90 bp | GGGCAGTCGTGCTGCAGGTGGGCAGGCAGGTCACGCCGGCTCAGCTaGGCTGGGCAGCGATTAGGGCAGGGGACTACATTGAAGCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GQSCCRWAGRSRRLS*AGQRLGQGTTLKLQ Trigger: TTGCAGCTTCAATGTAGTCCCCTGCCCTAATCGCTGCCCAGCCAAGCTGAGCCGGCGTGACCTGCCTGCCCACCTGCAGCACGACTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CCA 72 bp | CAGGTGGGCAGGCAGGTCACGCCGGCTCAGCTTGGCTaGGCAGCGATTAGGGCAGGGGACTACATTGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: QVGRQVTPAQLG*AAIRAGDYIEA Trigger: AGCTTCAATGTAGTCCCCTGCCCTAATCGCTGCCCAGCCAAGCTGAGCCGGCGTGACCTGCCTGCCCACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CAA 72 bp | GCGGGCCCCACACTTGTTCTCACAGTACACACTCTCTaGGGGGCACACGCCCTCGTGACTCTCGTAGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AGPTLVLTVHTL*GAHALVTLVGL Trigger: GAGGCCTACGAGAGTCACGAGGGCGTGTGCCCCCAAGAGAGTGTGTACTGTGAGAACAAGTGTGGGGCCCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CCA 72 bp | CTGAGAAACTCCTGCAGGCAGGTGTCGCAGAAGCGGTaGCCACAAGTAGACACCTGCACAGGCTCGCGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LRNSCRQVSQKR*PQVDTCTGSRM Trigger: CATGCGCGAGCCTGTGCAGGTGTCTACTTGTGGCCACCGCTTCTGCGACACCTGCCTGCAGGAGTTTCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CAA 72 bp | GCCTCCCCACTGAAGTCACAGCCACAGAATTCACACTaGAGGCGGCGCTTAGGGCAGTCGTGCTGCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ASPLKSQPQNSH*RRRLGQSCCRW Trigger: CCACCTGCAGCACGACTGCCCTAAGCGCCGCCTCAAGTGTGAATTCTGTGGCTGTGACTTCAGTGGGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CAA 72 bp | TGGGCCAACAGTCGCCTCATCATGCGGGCCCCACACTaGTTCTCACAGTACACACTCTCTTGGGGGCACACG | + |
|
Preference number: 6 (lower is better) Translates to: WANSRLIMRAPH*FSQYTLSWGHT Trigger: CGTGTGCCCCCAAGAGAGTGTGTACTGTGAGAACAAGTGTGGGGCCCGCATGATGAGGCGACTGTTGGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS GCA 72 bp | CAGACGTGGCATGCTGGGCCAACAGTCGCCTCATCATaGGGGCCCCACACTTGTTCTCACAGTACACACTCT | + |
|
Preference number: 6 (lower is better) Translates to: QTWHAGPTVASS*GPHTCSHSTHS Trigger: AGAGTGTGTACTGTGAGAACAAGTGTGGGGCCCGCATGATGAGGCGACTGTTGGCCCAGCATGCCACGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS GCA 72 bp | AAACAAATTCCTTGGTACAGTAGGCACAGGGCTGGGTaGGCTTGGGGCACTCAGACGTGGCATGCTGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: KQIPWYSRHRAG*AWGTQTWHAGP Trigger: TGGCCCAGCATGCCACGTCTGAGTGCCCCAAGCGCACCCAGCCCTGTGCCTACTGTACCAAGGAATTTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS GCA 72 bp | AGCCCAGAGAACTCTCATCCAGGGAGCCTCGCCACGTaGCGGGCTTCTGGAAGTTCTTCCAGTTTGGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPENSHPGSLAT*RASGSSSSLDQ Trigger: CTGATCCAAACTGGAAGAACTTCCAGAAGCCCGGCACGTGGCGAGGCTCCCTGGATGAGAGTTCTCTGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CCA 72 bp | ACTGGTGGCTCTGGATGGTGTCATAAACAAATTCCTTaGTACAGTAGGCACAGGGCTGGGTGCGCTTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TGGSGWCHKQIP*YSRHRAGCAWG Trigger: GCCCCAAGCGCACCCAGCCCTGTGCCTACTGTACCAAGGAATTTGTTTATGACACCATCCAGAGCCACCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||
| CDS CAA 72 bp | TGGGTCTGGGTAGATCTTGGCATAGTCCAGAGGAAGTaGGTCCTCAGGGCATTTGAAGACTCCTTCACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: WVWVDLGIVQRK*VLRAFEDSFTE Trigger: CTCAGTGAAGGAGTCTTCAAATGCCCTGAGGACCAACTTCCTCTGGACTATGCCAAGATCTACCCAGACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017530.4 |
||