Pregenerated sensors for TRAF3IP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037318Ensembl transcript IDs: ENSMUST00000043550.11, ENSMUST00000159666.2, ENSMUST00000160302.4, ENSMUST00000161367.2, ENSMUST00000162480.3, ENSMUST00000192020.6, ENSMUST00000194278.6
Found 251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTAATATGCGGGATGAATTTGAGGAGCAGGCTCCCTGCAAGTGGTaGTTAGCCCTCTTGCTCTGGGGGACTGCTCCCAGGGCCCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: FNMRDEFEEQAPCKW*LALLLWGTAPRAPA Trigger: GGCTGGGGCCCTGGGAGCAGTCCCCCAGAGCAAGAGGGCTAACCACCACTTGCAGGGAGCCTGCTCCTCAAATTCATCCCGCATATTAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159666.2 |
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| 3UTR GCA 90 bp | CTCTCGAGTTTGGTCTGCAGCTCCTGGTGCTCATTTTCTAAAAGCTaGAGGGCCTGGCTCATCTGTGAGTCTCTGCTGTCTGCTCCCTGT | + |
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Preference number: 1 (lower is better) Translates to: LSSLVCSSWCSFSKS*RAWLICESLLSAPC Trigger: ACAGGGAGCAGACAGCAGAGACTCACAGATGAGCCAGGCCCTGCAGCTTTTAGAAAATGAGCACCAGGAGCTGCAGACCAAACTCGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR CCA 90 bp | CAATCACCACCATCAGCACTGGGAGCCATTGACCACACTGCAGTCTaGGAAATGGCTCCTGGCTGTGCCTCAGTGCTTCTTGACTGTGAT | + |
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Preference number: 1 (lower is better) Translates to: QSPPSALGAIDHTAV*EMAPGCASVLLDCD Trigger: ATCACAGTCAAGAAGCACTGAGGCACAGCCAGGAGCCATTTCCCAGACTGCAGTGTGGTCAATGGCTCCCAGTGCTGATGGTGGTGATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR TCA 90 bp | TATATACCTCCCAGAGCAGGTGGCTGGCTGAAGTGTCCAGGCCAGTaGTCATTTCTCAGAACGTTCCCCTACCTCCCTGACTTCACAGAC | + |
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Preference number: 1 (lower is better) Translates to: YIPPRAGGWLKCPGQ*SFLRTFPYLPDFTD Trigger: GTCTGTGAAGTCAGGGAGGTAGGGGAACGTTCTGAGAAATGATCACTGGCCTGGACACTTCAGCCAGCCACCTGCTCTGGGAGGTATATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160302.4 |
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| 3UTR TCA 90 bp | AACCCTTCCCCACAGTTTATATACCTCCCAGAGCAGGTGGCTGGCTaGAGTGTCCAGGCCAGTGATCATTTCTCAGAACGTTCCCCTACC | + |
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Preference number: 1 (lower is better) Translates to: NPSPQFIYLPEQVAG*SVQASDHFSERSPT Trigger: GGTAGGGGAACGTTCTGAGAAATGATCACTGGCCTGGACACTTCAGCCAGCCACCTGCTCTGGGAGGTATATAAACTGTGGGGAAGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160302.4 |
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| 3UTR GCA 90 bp | TCTTCAGATGACCAGGTTGCCTTTGTTTGCCAGGAACACTGCCAGTaGTGTAGCAATCACCACCATCAGCACTGGGAGCCATTGACCACA | + |
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Preference number: 1 (lower is better) Translates to: SSDDQVAFVCQEHCQ*CSNHHHQHWEPLTT Trigger: TGTGGTCAATGGCTCCCAGTGCTGATGGTGGTGATTGCTACAGCACTGGCAGTGTTCCTGGCAAACAAAGGCAACCTGGTCATCTGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR GCA 90 bp | AGAAGTTCTTCAGATGACCAGGTTGCCTTTGTTTGCCAGGAACACTaGCAGTGCTGTAGCAATCACCACCATCAGCACTGGGAGCCATTG | + |
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Preference number: 1 (lower is better) Translates to: RSSSDDQVAFVCQEH*QCCSNHHHQHWEPL Trigger: CAATGGCTCCCAGTGCTGATGGTGGTGATTGCTACAGCACTGGCAGTGTTCCTGGCAAACAAAGGCAACCTGGTCATCTGAAGAACTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR GCA 90 bp | CAGATAGATGCCAGAAGTTCTTCAGATGACCAGGTTGCCTTTGTTTaGCAGGAACACTGCCAGTGCTGTAGCAATCACCACCATCAGCAC | + |
|
Preference number: 1 (lower is better) Translates to: QIDARSSSDDQVAFV*QEHCQCCSNHHHQH Trigger: GTGCTGATGGTGGTGATTGCTACAGCACTGGCAGTGTTCCTGGCAAACAAAGGCAACCTGGTCATCTGAAGAACTTCTGGCATCTATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR CCA 90 bp | AAAGTAGAAACCCTTCCCCACAGTTTATATACCTCCCAGAGCAGGTaGCTGGCTGAAGTGTCCAGGCCAGTGATCATTTCTCAGAACGTT | + |
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Preference number: 1 (lower is better) Translates to: KVETLPHSLYTSQSR*LAEVSRPVIISQNV Trigger: AACGTTCTGAGAAATGATCACTGGCCTGGACACTTCAGCCAGCCACCTGCTCTGGGAGGTATATAAACTGTGGGGAAGGGTTTCTACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160302.4 |
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| 3UTR TCA 90 bp | TTCCCAAGGAGCAGAAGCTTAGAGAAAGGGAACACATTGAACTCCTaGAGTTTAATATGCGGGATGAATTTGAGGAGCAGGCTCCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: FPRSRSLEKGNTLNS*SLICGMNLRSRLPA Trigger: TGCAGGGAGCCTGCTCCTCAAATTCATCCCGCATATTAAACTTCAGGAGTTCAATGTGTTCCCTTTCTCTAAGCTTCTGCTCCTTGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162480.3 |
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| 3UTR-3UTR GCA 90 bp | CTGCAAGTGGTGGTTAGCCCTCTTGCTCTGGGGGACTGCTCCCAGGGCCCCAGCGCCCTCTGTAGCTGCTaGTCTGCACACATTTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LQVVVSPLALGDCSQGPSALCSC*SAHIFS Trigger: GGAGAAAATGTGTGCAGAGCAGCAGCTACAGAGGGC...GCTGGGGCCCTGGGAGCAGTCCCCCAGAGCAAGAGGGCTAACCACCACTTGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159666.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCCCTGCAAGTGGTGGTTAGCCCTCTTGCTCTGGGGGACTGCTCCCAGGGCCTGTGCCCTCTGTAGCTaGTGCTCTGCACACATTTTC | + |
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Preference number: 2 (lower is better) Translates to: APCKWWLALLLWGTAPRACALCS*CSAHIF Trigger: GAAAATGTGTGCAGAGCAGCAGCTACAGAGGGCACA...GGCCCTGGGAGCAGTCCCCCAGAGCAAGAGGGCTAACCACCACTTGCAGGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159666.2 |
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| 3UTR-3UTR GCA 90 bp | TTTAATATGCGGGATGAATTTGAGGAGCAGGCTCCCTGCAAGTGGTGGTTAGCCCTTGCTCTGGGGGACTaGTCCCAGGGCCCCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: FNMRDEFEEQAPCKWWLALALGD*SQGPSP Trigger: GGGGCTGGGGCCCTGGGAGCAGTCCCCCAGAGCAAG...GGCTAACCACCACTTGCAGGGAGCCTGCTCCTCAAATTCATCCCGCATATTAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159666.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCACAGTTTATATACCTCCCAGAGCAGGTGGCTGGCTGAAGTGTCCAGGCCATCACAGACTCGGGAGTaGATGGGACCCCCAGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: PHSLYTSQSRWLAEVSRPSQTRE*MGPPEV Trigger: GACTTCTGGGGGTCCCATCCACTCCCGAGTCTGTGA...TGGCCTGGACACTTCAGCCAGCCACCTGCTCTGGGAGGTATATAAACTGTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160302.4 |
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| 3UTR-3UTR GCA 90 bp | CCAGAAGTTCTTCAGATGACCAGGTTGCCTTTGTTTGCCAGGAACACTGCCAGTCTCTCCAGCTCTCTGTaGTGGTCCCCTAGGGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: PEVLQMTRLPLFARNTASLSSSL*WSPRVL Trigger: GAGGACCCTAGGGGACCAGCACAGAGAGCTGGAGAG...ACTGGCAGTGTTCCTGGCAAACAAAGGCAACCTGGTCATCTGAAGAACTTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR-3UTR TCA 90 bp | CTGAAGTTTAATATGCGGGATGAATTTGAGGAGCAGGCTCCCTGCAAGTGGTGGCAGCACTTTCTGCAGTaGCGCCTTAGCCTTCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: LKFNMRDEFEEQAPCKWWQHFLQ*RLSLLL Trigger: GAGCAGAAGGCTAAGGCGTCACTGCAGAAAGTGCTG...CCACCACTTGCAGGGAGCCTGCTCCTCAAATTCATCCCGCATATTAAACTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159666.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGCCAAAGCCAGGGACAGCTGGGAGAGACCAGAGGAGAGAAGGTTCCCAAAACACATTGAACTCCTaGAGTTTAATATGCGGGATG | + |
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Preference number: 2 (lower is better) Translates to: ALPKPGTAGRDQRREGSQNTLNS*SLICGM Trigger: CATCCCGCATATTAAACTTCAGGAGTTCAATGTGTT...TTGGGAACCTTCTCTCCTCTGGTCTCTCCCAGCTGTCCCTGGCTTTGGCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162480.3 |
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| 3UTR-3UTR GCA 90 bp | CCTCAGGCTTCACTTCATCAAGGGAGAGCTTTGGATTCCACACAGGCAGACCCTTCATCTGTGAGTCTCTaGTGTCTGCTCCCTGTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: PQASLHQGRALDSTQADPSSVSL*CLLPVV Trigger: AACTACAGGGAGCAGACAGCAGAGACTCACAGATGA...AGGGTCTGCCTGTGTGGAATCCAAAGCTCTCCCTTGATGAAGTGAAGCCTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGTTTGCCAGGAACACTGCCAGTGCTGTAGCAATCACCACCATCAGCACTGCAGGCAGGAGGTCCTaGAGAATCACCATTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: PLFARNTASAVAITTISTAGRRS*RITIFF Trigger: AAAGAAAATGGTGATTCTCCAGGACCTCCTGCCTGC...AGTGCTGATGGTGGTGATTGCTACAGCACTGGCAGTGTTCCTGGCAAACAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR CAA 90 bp | TCTCCTTTCTTGTGCCCTCAGGCTTCACTTCATCAAGGGAGAGCTTaGGATTCCACACAGGCAGACCCTGATCTTTCTTTAAGAGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: SPFLCPQASLHQGRA*DSTQADPDLSLRAS Trigger: AGAAGCTCTTAAAGAAAGATCAGGGTCTGCCTGTGTGGAATCCAAAGCTCTCCCTTGATGAAGTGAAGCCTGAGGGCACAAGAAAGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR-3UTR TCA 90 bp | GTACTTCTCATTGAGGATGTCTATTCTGAATGCAGTTCTCTGCACTCCTTTTCCCAGCACTTTCTGCAGTaGCGCCTTAGCCTTCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: VLLIEDVYSECSSLHSFSQHFLQ*RLSLLL Trigger: GAGCAGAAGGCTAAGGCGTCACTGCAGAAAGTGCTG...GGAAAAGGAGTGCAGAGAACTGCATTCAGAATAGACATCCTCAATGAGAAGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR-3UTR GCA 90 bp | CCTTTGTTTGCCAGGAACACTGCCAGTGCTGTAGCAATCACCACCATCAGCACTCTAGGGATCTTAGTTTaGCCTTCAGCTTGTCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: PLFARNTASAVAITTISTLGILV*PSACLH Trigger: ATGAAGACAAGCTGAAGGGCAAACTAAGATCCCTAG...AGTGCTGATGGTGGTGATTGCTACAGCACTGGCAGTGTTCCTGGCAAACAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR-3UTR GCA 90 bp | ATAGATGCCAGAAGTTCTTCAGATGACCAGGTTGCCTTTGTTTGCCAGGAACACGTAGCTGTTGTACTTTaGTCACCAGGGCCTGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: IDARSSSDDQVAFVCQEHVAVVL*SPGPVS Trigger: AGAAACAGGCCCTGGTGAGCAAAGTACAACAGCTAC...GTGTTCCTGGCAAACAAAGGCAACCTGGTCATCTGAAGAACTTCTGGCATCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR-3UTR GCA 90 bp | GCAGACCCTGATCTTTCTTTAAGAGCTTCTCCTGTTCTTGAAGTTGTAAGGATTCCTTCTGCTCATAGCTaGTTCTCTGGTCTTCCATCT | + |
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Preference number: 2 (lower is better) Translates to: ADPDLSLRASPVLEVVRIPSAHS*FSGLPS Trigger: AGATGGAAGACCAGAGAAGCAGCTATGAGCAGAAGG...AATCCTTACAACTTCAAGAACAGGAGAAGCTCTTAAAGAAAGATCAGGGTCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR-3UTR TCA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCATTTGTAGTTGGTCTCTaGGCTCCTCCTCTTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPFVVGL*APPLSP Trigger: AGGAGAAAGAGGAGGAGCTCAGAGACCAACTACAAA...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR-3UTR GCA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGTCTGCAGCTCCTGGTaGTCATTTTCTAAAAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPVCSSW*SFSKSC Trigger: GCAGCTTTTAGAAAATGAGCACCAGGAGCTGCAGAC...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR-3UTR TCA 90 bp | CGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCGGAGTTGTTTGCATCTaGGTTTTACTTCAGATAGAT | + |
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Preference number: 2 (lower is better) Translates to: RIHLEGNPSYKVPELKVFGVVCI*VLLQID Trigger: ATCTATCTGAAGTAAAACTCAGATGCAAACAACTCC...GAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| 3UTR CAA 90 bp | ACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTTGTTaGCATCTGAGTTTTACTTCAGATAGATGCCAGAAGTTCTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: TQVIKYQNSRFSWSC*HLSFTSDRCQKFFR Trigger: TCTGAAGAACTTCTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR-3UTR TCA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGGAGTTGTTTGCATCTaGGTTTTACTTCAGATAGAT | + |
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Preference number: 2 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPGVVCI*VLLQID Trigger: ATCTATCTGAAGTAAAACTCAGATGCAAACAACTCC...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| 3UTR-3UTR CCA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAAACTCAAGGTTTTCATaGAGTTGTTTGCATCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPNSRFS*SCLHLS Trigger: ACTCAGATGCAAACAACTCCATGAAAACCTTGAGTT...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| 3UTR GCA 72 bp | TCCTGGGTCTCAGAGCTCTGCTGCTCTCCGTCTCCCTaGAGGCTCTCGAGTTTGGTCTGCAGCTCCTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: SWVSELCCSPSP*RLSSLVCSSWC Trigger: GCACCAGGAGCTGCAGACCAAACTCGAGAGCCTGCAGGGAGACGGAGAGCAGCAGAGCTCTGAGACCCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR CCA 72 bp | CGGGATGAATTTGAGGAGCAGGCTCCCTGCAAGTGGTaGTTAGCCCTCTTGCTCTGGGGGACTGCTCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: RDEFEEQAPCKW*LALLLWGTAPR Trigger: CCTGGGAGCAGTCCCCCAGAGCAAGAGGGCTAACCACCACTTGCAGGGAGCCTGCTCCTCAAATTCATCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159666.2 |
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| 3UTR TCA 72 bp | CCAGTGATCATTTCTCAGAACGTTCCCCTACCTCCCTaGCTTCACAGACTCGGGAGTGGATGGGACCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: PVIISQNVPLPP*LHRLGSGWDPQ Trigger: CTGGGGGTCCCATCCACTCCCGAGTCTGTGAAGTCAGGGAGGTAGGGGAACGTTCTGAGAAATGATCACTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160302.4 |
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| 3UTR CCA 72 bp | CACTGGGAGCCATTGACCACACTGCAGTCTGGGAAATaGCTCCTGGCTGTGCCTCAGTGCTTCTTGACTGTG | + |
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Preference number: 3 (lower is better) Translates to: HWEPLTTLQSGK*LLAVPQCFLTV Trigger: CACAGTCAAGAAGCACTGAGGCACAGCCAGGAGCCATTTCCCAGACTGCAGTGTGGTCAATGGCTCCCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR GCA 72 bp | TGCTCTCCGTCTCCCTGCAGGCTCTCGAGTTTGGTCTaGAGCTCCTGGTGCTCATTTTCTAAAAGCTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: CSPSPCRLSSLV*SSWCSFSKSCR Trigger: CCTGCAGCTTTTAGAAAATGAGCACCAGGAGCTGCAGACCAAACTCGAGAGCCTGCAGGGAGACGGAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR GCA 72 bp | GACCAGGTTGCCTTTGTTTGCCAGGAACACTGCCAGTaGTGTAGCAATCACCACCATCAGCACTGGGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: DQVAFVCQEHCQ*CSNHHHQHWEP Trigger: TGGCTCCCAGTGCTGATGGTGGTGATTGCTACAGCACTGGCAGTGTTCCTGGCAAACAAAGGCAACCTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR GCA 72 bp | TTTAATATGCGGGATGAATTTGAGGAGCAGGCTCCCTaGAAGTGGTGGTTAGCCCTCTTGCTCTGGGGGACT | + |
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Preference number: 3 (lower is better) Translates to: FNMRDEFEEQAP*KWWLALLLWGT Trigger: AGTCCCCCAGAGCAAGAGGGCTAACCACCACTTGCAGGGAGCCTGCTCCTCAAATTCATCCCGCATATTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159666.2 |
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| 3UTR GCA 72 bp | TCAGATGACCAGGTTGCCTTTGTTTGCCAGGAACACTaGCAGTGCTGTAGCAATCACCACCATCAGCACTGG | + |
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Preference number: 3 (lower is better) Translates to: SDDQVAFVCQEH*QCCSNHHHQHW Trigger: CCAGTGCTGATGGTGGTGATTGCTACAGCACTGGCAGTGTTCCTGGCAAACAAAGGCAACCTGGTCATCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR-3UTR CAA 90 bp | CAAGGGAGAGCTTTGGATTCCACACAGGCAGACCCTGATCTTTCTTTAAGAGCTCTGAAGCACATGCAGTaGGCTCTCCAGCTCTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: QGRALDSTQADPDLSLRALKHMQ*ALQLSV Trigger: CACAGAGAGCTGGAGAGCCAACTGCATGTGCTTCAG...AGCTCTTAAAGAAAGATCAGGGTCTGCCTGTGTGGAATCCAAAGCTCTCCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR GCA 72 bp | GCCAGAAGTTCTTCAGATGACCAGGTTGCCTTTGTTTaGCAGGAACACTGCCAGTGCTGTAGCAATCACCAC | + |
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Preference number: 3 (lower is better) Translates to: ARSSSDDQVAFV*QEHCQCCSNHH Trigger: GTGGTGATTGCTACAGCACTGGCAGTGTTCCTGGCAAACAAAGGCAACCTGGTCATCTGAAGAACTTCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR TCA 72 bp | AGTTTTACTTCAGATAGATGCCAGAAGTTCTTCAGATaGCCAGGTTGCCTTTGTTTGCCAGGAACACTGCCA | + |
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Preference number: 3 (lower is better) Translates to: SFTSDRCQKFFR*PGCLCLPGTLP Trigger: TGGCAGTGTTCCTGGCAAACAAAGGCAACCTGGTCATCTGAAGAACTTCTGGCATCTATCTGAAGTAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| 3UTR-3UTR CAA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAATGACCAGGTTGCCTTaGTTTGCCAGGAACACTGCC | + |
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Preference number: 3 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPMTRLP*FARNTA Trigger: GGCAGTGTTCCTGGCAAACAAAGGCAACCTGGTCAT...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| CDS-3UTR CCA 90 bp | CTGCCAAAGCCAGGGACAGCTGGGAGAGACCAGAGGAGAGAAGGTTCCCAAGGACAGGGCCCCAGCCCCTaGAACTGCACAGCATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LPKPGTAGRDQRREGSQGQGPSP*NCTASP Trigger: TGGAGATGCTGTGCAGTTCCAGGGGCTGGGGCCCTG...TCCTTGGGAACCTTCTCTCCTCTGGTCTCTCCCAGCTGTCCCTGGCTTTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162480.3 |
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| CDS-3UTR GCA 90 bp | CCCCACAGTTTATATACCTCCCAGAGCAGGTGGCTGGCTGAAGTGTCCAGGCCACTCTCCAGCTCTCTGTaGTGGTCCCCTAGGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PHSLYTSQSRWLAEVSRPLSSSL*WSPRVL Trigger: GAGGACCCTAGGGGACCAGCACAGAGAGCTGGAGAG...TGGCCTGGACACTTCAGCCAGCCACCTGCTCTGGGAGGTATATAAACTGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160302.4 |
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| CDS-3UTR GCA 90 bp | CTGAAGTTTAATATGCGGGATGAATTTGAGGAGCAGGCTCCCTGCAAGTGGTGGCTTGCTCTGGGGGACTaGTCCCAGGGCCCCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LKFNMRDEFEEQAPCKWWLALGD*SQGPSP Trigger: GGGGCTGGGGCCCTGGGAGCAGTCCCCCAGAGCAAG...CCACCACTTGCAGGGAGCCTGCTCCTCAAATTCATCCCGCATATTAAACTTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162480.3 |
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| CDS-3UTR CCA 90 bp | CCTCAGGCTTCACTTCATCAAGGGAGAGCTTTGGATTCCACACAGGCAGACCCTCCATGGGAGGCATGGTaGCCACCCAGATCCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PQASLHQGRALDSTQADPPWEAW*PPRSLW Trigger: CCAGAGGGATCTGGGTGGCCACCATGCCTCCCATGG...AGGGTCTGCCTGTGTGGAATCCAAAGCTCTCCCTTGATGAAGTGAAGCCTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| CDS-3UTR CCA 90 bp | TTTCTCAGAACGTTCCCCTACCTCCCTGACTTCACAGACTCGGGAGTGGATGGGTCCAGCTCTCTGTGCTaGTCCCCTAGGGTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLRTFPYLPDFTDSGVDGSSSLC*SPRVLQ Trigger: CTGGAGGACCCTAGGGGACCAGCACAGAGAGCTGGA...CCCATCCACTCCCGAGTCTGTGAAGTCAGGGAGGTAGGGGAACGTTCTGAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160302.4 |
||
| CDS-3UTR GCA 90 bp | TGCCAAAGCCAGGGACAGCTGGGAGAGACCAGAGGAGAGAAGGTTCCCAAGGAGGCCCTCTGTAGCTGCTaGTCTGCACACATTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CQSQGQLGETRGEKVPKEALCSC*SAHIFS Trigger: GGAGAAAATGTGTGCAGAGCAGCAGCTACAGAGGGC...CTCCTTGGGAACCTTCTCTCCTCTGGTCTCTCCCAGCTGTCCCTGGCTTTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162480.3 |
||
| CDS-3UTR CCA 90 bp | CCTTTGTTTGCCAGGAACACTGCCAGTGCTGTAGCAATCACCACCATCAGCACTCCTCAGCACCTTCCCTaGCTGGCGGCAAGTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLFARNTASAVAITTISTPQHLP*LAASGL Trigger: GAGACCACTTGCCGCCAGCCAGGGAAGGTGCTGAGG...AGTGCTGATGGTGGTGATTGCTACAGCACTGGCAGTGTTCCTGGCAAACAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
||
| CDS-3UTR TCA 90 bp | CCTTTGTTTGCCAGGAACACTGCCAGTGCTGTAGCAATCACCACCATCAGCACTAGCTGCCGAGCTCCCTaGAGCCGTTCCTTGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLFARNTASAVAITTISTSCRAP*SRSLCW Trigger: CCAACACAAGGAACGGCTTCAGGGAGCTCGGCAGCT...AGTGCTGATGGTGGTGATTGCTACAGCACTGGCAGTGTTCCTGGCAAACAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | CTGCCAAAGCCAGGGACAGCTGGGAGAGACCAGAGGAGAGAAGGTTCCCAAGGATGTGCCCTCTGTAGCTaGTGCTCTGCACACATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPKPGTAGRDQRREGSQGCALCS*CSAHIF Trigger: GAAAATGTGTGCAGAGCAGCAGCTACAGAGGGCACA...TCCTTGGGAACCTTCTCTCCTCTGGTCTCTCCCAGCTGTCCCTGGCTTTGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162480.3 |
||
| CDS-3UTR GCA 90 bp | CACAGTTTATATACCTCCCAGAGCAGGTGGCTGGCTGAAGTGTCCAGGCCAGTGCTGACACTTCTGCTCTaGCAAAGCCAGGGACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSLYTSQSRWLAEVSRPVLTLLL*QSQGQL Trigger: CAGCTGTCCCTGGCTTTGGCAGAGCAGAAGTGTCAG...CACTGGCCTGGACACTTCAGCCAGCCACCTGCTCTGGGAGGTATATAAACTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160302.4 |
||
| CDS-3UTR GCA 90 bp | CTTCACAGACTCGGGAGTGGATGGGACCCCCAGAAGTCACGTAGTCCTTTCCCCCTCTCGAGTTTGGTCTaGAGCTCCTGGTGCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LHRLGSGWDPQKSRSPFPLSSLV*SSWCSF Trigger: AAATGAGCACCAGGAGCTGCAGACCAAACTCGAGAG...GGGGAAAGGACTACGTGACTTCTGGGGGTCCCATCCACTCCCGAGTCTGTGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160302.4 |
||
| CDS-3UTR GCA 90 bp | AGAACGTTCCCCTACCTCCCTGACTTCACAGACTCGGGAGTGGATGGGACCCCCGTAGCTGTTGTACTTTaGTCACCAGGGCCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RTFPYLPDFTDSGVDGTPVAVVL*SPGPVS Trigger: AGAAACAGGCCCTGGTGAGCAAAGTACAACAGCTAC...GGGGGTCCCATCCACTCCCGAGTCTGTGAAGTCAGGGAGGTAGGGGAACGTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160302.4 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGTTCTTCAGATGACCAGGTTGCCTTTGTTTGCCAGGAACACTGCCAGTCTCCCATGGGAGGCATaGTGGCCACCCAGATCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PEVLQMTRLPLFARNTASLPWEA*WPPRSL Trigger: GAGGGATCTGGGTGGCCACCATGCCTCCCATGGGAG...ACTGGCAGTGTTCCTGGCAAACAAAGGCAACCTGGTCATCTGAAGAACTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
||
| 3UTR CAA 72 bp | TGCTGTAGCAATCACCACCATCAGCACTGGGAGCCATaGACCACACTGCAGTCTGGGAAATGGCTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CCSNHHHQHWEP*TTLQSGKWLLA Trigger: AGCCAGGAGCCATTTCCCAGACTGCAGTGTGGTCAATGGCTCCCAGTGCTGATGGTGGTGATTGCTACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | TGCCAAAGCCAGGGACAGCTGGGAGAGACCAGAGGAGAGAAGGTTCCCAAGGAGCCTTCTGCTCATAGCTaGTTCTCTGGTCTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: CQSQGQLGETRGEKVPKEPSAHS*FSGLPS Trigger: AGATGGAAGACCAGAGAAGCAGCTATGAGCAGAAGG...CTCCTTGGGAACCTTCTCTCCTCTGGTCTCTCCCAGCTGTCCCTGGCTTTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162480.3 |
||
| CDS-3UTR GCA 90 bp | CTTCACAGACTCGGGAGTGGATGGGACCCCCAGAAGTCACGTAGTCCTTTCCCCTCATCTGTGAGTCTCTaGTGTCTGCTCCCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LHRLGSGWDPQKSRSPFPSSVSL*CLLPVV Trigger: AACTACAGGGAGCAGACAGCAGAGACTCACAGATGA...GGGGAAAGGACTACGTGACTTCTGGGGGTCCCATCCACTCCCGAGTCTGTGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160302.4 |
||
| CDS-3UTR CCA 90 bp | ACCCTTCCCCACAGTTTATATACCTCCCAGAGCAGGTGGCTGGCTGAAGTGTCCAAAAGCTGCAGGGCCTaGCTCATCTGTGAGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLPHSLYTSQSRWLAEVSKSCRA*LICESL Trigger: CAGAGACTCACAGATGAGCCAGGCCCTGCAGCTTTT...GGACACTTCAGCCAGCCACCTGCTCTGGGAGGTATATAAACTGTGGGGAAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160302.4 |
||
| CDS-3UTR GCA 90 bp | CCCCACAGTTTATATACCTCCCAGAGCAGGTGGCTGGCTGAAGTGTCCAGGCCAGTCTGCAGCTCCTGGTaGTCATTTTCTAAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PHSLYTSQSRWLAEVSRPVCSSW*SFSKSC Trigger: GCAGCTTTTAGAAAATGAGCACCAGGAGCTGCAGAC...TGGCCTGGACACTTCAGCCAGCCACCTGCTCTGGGAGGTATATAAACTGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160302.4 |
||
| CDS-3UTR CCA 90 bp | GTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTCTGGCTGGCGGCAAGTaGTCTCATTGCGGCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VRIHLEGNPSYKVPELKVLAGGK*SHCGGG Trigger: GCCGCCGCCGCAATGAGACCACTTGCCGCCAGCCAG...AACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | TGCCAAAGCCAGGGACAGCTGGGAGAGACCAGAGGAGAGAAGGTTCCCAAGGAGCTAGGGATCTTAGTTTaGCCTTCAGCTTGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CQSQGQLGETRGEKVPKELGILV*PSACLH Trigger: ATGAAGACAAGCTGAAGGGCAAACTAAGATCCCTAG...CTCCTTGGGAACCTTCTCTCCTCTGGTCTCTCCCAGCTGTCCCTGGCTTTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162480.3 |
||
| CDS-3UTR CCA 90 bp | CATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGCTGGCTGGCGGCAAGTaGTCTCATTGCGGCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLEGNPSYKVPELKVFMELAGGK*SHCGGG Trigger: GCCGCCGCCGCAATGAGACCACTTGCCGCCAGCCAG...CTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | CACAGTTTATATACCTCCCAGAGCAGGTGGCTGGCTGAAGTGTCCAGGCCAGTGCTGCTCCCTGTAGTTTaGACTGAAGCACATGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HSLYTSQSRWLAEVSRPVLLPVV*TEAHAV Trigger: AACTGCATGTGCTTCAGTCCAAACTACAGGGAGCAG...CACTGGCCTGGACACTTCAGCCAGCCACCTGCTCTGGGAGGTATATAAACTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160302.4 |
||
| CDS-3UTR TCA 90 bp | CACAGTTTATATACCTCCCAGAGCAGGTGGCTGGCTGAAGTGTCCAGGCCAGTGTCTGACTTCTTTAGTTaGTCTTGTAGGTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSLYTSQSRWLAEVSRPVSDFFS*SCRSWV Trigger: GACCCAGGACCTACAAGATCAACTAAAGAAGTCAGA...CACTGGCCTGGACACTTCAGCCAGCCACCTGCTCTGGGAGGTATATAAACTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160302.4 |
||
| CDS-3UTR GCA 90 bp | GTTGCCTTTGTTTGCCAGGAACACTGCCAGTGCTGTAGCAATCACCACCATCAGCCAGATCCCTCTGGATaGCTGAGGAGGAATGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: VAFVCQEHCQCCSNHHHQPDPSG*LRRNDV Trigger: TACATCATTCCTCCTCAGGCATCCAGAGGGATCTGG...CTGATGGTGGTGATTGCTACAGCACTGGCAGTGTTCCTGGCAAACAAAGGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | CTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCCCTCAGCACCTTCCCTaGCTGGCGGCAAGTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRVRIHLEGNPSYKVPELPQHLP*LAASGL Trigger: GAGACCACTTGCCGCCAGCCAGGGAAGGTGCTGAGG...GAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | CTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCCCATGGGAGGCATGGTaGCCACCCAGATCCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRVRIHLEGNPSYKVPELPWEAW*PPRSLW Trigger: CCAGAGGGATCTGGGTGGCCACCATGCCTCCCATGG...GAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | AGCACATGCAGTTGGCTCTCCAGCTCTCTGTGCTGGTCCCCTAGGGTCCTCCAGATCATTCTTTATTGTTaGCAATGCCTCTTCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: STCSWLSSSLCWSPRVLQIILYC*QCLFCL Trigger: AAGGCAGAAGAGGCATTGCCAACAATAAAGAATGAT...CTGGAGGACCCTAGGGGACCAGCACAGAGAGCTGGAGAGCCAACTGCATGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
||
| CDS-3UTR TCA 90 bp | CTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAGCTGCCGAGCTCCCTaGAGCCGTTCCTTGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRVRIHLEGNPSYKVPELSCRAP*SRSLCW Trigger: CCAACACAAGGAACGGCTTCAGGGAGCTCGGCAGCT...GAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | CAAGGGAGAGCTTTGGATTCCACACAGGCAGACCCTGATCTTTCTTTAAGAGCTCTTATCCCTGTTTCCTaGTGTCCAGGGAAAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGRALDSTQADPDLSLRALIPVS*CPGKEA Trigger: GGCCTCTTTCCCTGGACAGCAGGAAACAGGGATAAG...AGCTCTTAAAGAAAGATCAGGGTCTGCCTGTGTGGAATCCAAAGCTCTCCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | TCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTCTCCCATGGGAGGCATaGTGGCCACCCAGATCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGFIWRETQVIKYQNSRFLPWEA*WPPRSL Trigger: GAGGGATCTGGGTGGCCACCATGCCTCCCATGGGAG...AAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | CATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGGGCAAGTGGTCTCATTaGGGCGGCGGCGACGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HLEGNPSYKVPELKVFMEGKWSH*GGGDGF Trigger: AAAACCGTCGCCGCCGCCGCAATGAGACCACTTGCC...CTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | TCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTGGCAAGTGGTCTCATTaGGGCGGCGGCGACGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGFIWRETQVIKYQNSRFGKWSH*GGGDGF Trigger: AAAACCGTCGCCGCCGCCGCAATGAGACCACTTGCC...AAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | TCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTCTCTCCAGCTCTCTGTaGTGGTCCCCTAGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGFIWRETQVIKYQNSRFLSSSL*WSPRVL Trigger: GAGGACCCTAGGGGACCAGCACAGAGAGCTGGAGAG...AAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CCA 90 bp | GTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTGACGTCGCTCACACTTaGCCTCATAGCTCTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VRIHLEGNPSYKVPELKVDVAHT*PHSSQP Trigger: GGGCTGAGAGCTATGAGGCCAAGTGTGAGCGACGTC...AACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | TCAAGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGCCTCAGCACCTTCCCTaGCTGGCGGCAAGTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRFSWSCLHLSFTSDRCQPQHLP*LAASGL Trigger: GAGACCACTTGCCGCCAGCCAGGGAAGGTGCTGAGG...CTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTTGTTCCAGCTCTCTGTGCTaGTCCCCTAGGGTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WRETQVIKYQNSRFSWSCSSSLC*SPRVLQ Trigger: CTGGAGGACCCTAGGGGACCAGCACAGAGAGCTGGA...ACAACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| 3UTR CAA 72 bp | TTGTGCCCTCAGGCTTCACTTCATCAAGGGAGAGCTTaGGATTCCACACAGGCAGACCCTGATCTTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LCPQASLHQGRA*DSTQADPDLSL Trigger: TAAAGAAAGATCAGGGTCTGCCTGTGTGGAATCCAAAGCTCTCCCTTGATGAAGTGAAGCCTGAGGGCACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
||
| CDS-3UTR TCA 90 bp | AGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGAAGAGCTGCCGAGCTCCCTaGAGCCGTTCCTTGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RFSWSCLHLSFTSDRCQKSCRAP*SRSLCW Trigger: CCAACACAAGGAACGGCTTCAGGGAGCTCGGCAGCT...CTTCTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | TCAAGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGGGCAAGTGGTCTCATTaGGGCGGCGGCGACGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRFSWSCLHLSFTSDRCQGKWSH*GGGDGF Trigger: AAAACCGTCGCCGCCGCCGCAATGAGACCACTTGCC...CTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | CTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCTGGCAATGCCTCTTCTaGCTTTGTCTGAGTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LRVRIHLEGNPSYKVPELWQCLF*LCLSAP Trigger: CGGGGCACTCAGACAAAGGCAGAAGAGGCATTGCCA...GAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | CGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCGACGTCGCTCACACTTaGCCTCATAGCTCTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RIHLEGNPSYKVPELKVFDVAHT*PHSSQP Trigger: GGGCTGAGAGCTATGAGGCCAAGTGTGAGCGACGTC...GAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCACCATGGGAGGCATGGTaGCCACCCAGATCCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPPWEAW*PPRSLW Trigger: CCAGAGGGATCTGGGTGGCCACCATGCCTCCCATGG...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCACTCCCATGGGAGGCATaGTGGCCACCCAGATCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPLPWEA*WPPRSL Trigger: GAGGGATCTGGGTGGCCACCATGCCTCCCATGGGAG...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | GGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATCCAGCTCTCTGTGCTaGTCCCCTAGGGTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GFIWRETQVIKYQNSRFSSSSLC*SPRVLQ Trigger: CTGGAGGACCCTAGGGGACCAGCACAGAGAGCTGGA...TGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR TCA 90 bp | GTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTCCAGGTTTCTCCTTTTaGGGAACTGTAGCTGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRIHLEGNPSYKVPELKVPGFSF*GTVAAE Trigger: CTCGGCAGCTACAGTTCCTCAAAAGGAGAAACCTGG...AACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR TCA 90 bp | CTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCGTCTGTGTGGCTTCTTaGTGTCAGAGTCCTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRVRIHLEGNPSYKVPELVCVAS*CQSPVV Trigger: CACCACAGGACTCTGACATCAAGAAGCCACACAGAC...GAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR TCA 90 bp | CATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGCAGCACTTTCTGCAGTaGCGCCTTAGCCTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLEGNPSYKVPELKVFMEQHFLQ*RLSLLL Trigger: GAGCAGAAGGCTAAGGCGTCACTGCAGAAAGTGCTG...CTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | TCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTTCCTCCATCTGTCTTaGTGGAGGGCCCTTGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGFIWRETQVIKYQNSRFFLHLS*WRALVP Trigger: GGGAACAAGGGCCCTCCAGCAAGACAGATGGAGGAA...AAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | CGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCTTCCTCCATCTGTCTTaGTGGAGGGCCCTTGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RIHLEGNPSYKVPELKVFFLHLS*WRALVP Trigger: GGGAACAAGGGCCCTCCAGCAAGACAGATGGAGGAA...GAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | GTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTCTTATCCCTGTTTCCTaGTGTCCAGGGAAAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRIHLEGNPSYKVPELKVLIPVS*CPGKEA Trigger: GGCCTCTTTCCCTGGACAGCAGGAAACAGGGATAAG...AACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | TCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTGGCAATGCCTCTTCTaGCTTTGTCTGAGTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SGFIWRETQVIKYQNSRFWQCLF*LCLSAP Trigger: CGGGGCACTCAGACAAAGGCAGAAGAGGCATTGCCA...AAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCACTCTCCAGCTCTCTGTaGTGGTCCCCTAGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPLSSSL*WSPRVL Trigger: GAGGACCCTAGGGGACCAGCACAGAGAGCTGGAGAG...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | GTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTCAGGTTGCCTTTGTTTaGCAGGAACACTGCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRIHLEGNPSYKVPELKVQVAFV*QEHCQC Trigger: GCACTGGCAGTGTTCCTGGCAAACAAAGGCAACCTG...AACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CCA 90 bp | ATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTGACGTCGCTCACACTTaGCCTCATAGCTCTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IWRETQVIKYQNSRFSWSDVAHT*PHSSQP Trigger: GGGCTGAGAGCTATGAGGCCAAGTGTGAGCGACGTC...ACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | AGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGAAGCTCCATCTGTCTTGCTaGAGGGCCCTTGTTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RFSWSCLHLSFTSDRCQKLHLSC*RALVPW Trigger: CCAGGGAACAAGGGCCCTCCAGCAAGACAGATGGAG...CTTCTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | ATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTCTCCATCTGTCTTGCTaGAGGGCCCTTGTTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IWRETQVIKYQNSRFSWSLHLSC*RALVPW Trigger: CCAGGGAACAAGGGCCCTCCAGCAAGACAGATGGAG...ACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | TCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTGTCAGAGTCCTGTGGTaGAAAGGCTCTCCCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGFIWRETQVIKYQNSRFVRVLW*KGSPMG Trigger: TCCCATGGGAGAGCCTTTCCACCACAGGACTCTGAC...AAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | CATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGGTCAGAGTCCTGTGGTaGAAAGGCTCTCCCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLEGNPSYKVPELKVFMEVRVLW*KGSPMG Trigger: TCCCATGGGAGAGCCTTTCCACCACAGGACTCTGAC...CTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | GTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTGATGTCAGAGTCCTGTaGTGGAAAGGCTCTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VRIHLEGNPSYKVPELKVDVRVL*WKGSPM Trigger: CATGGGAGAGCCTTTCCACCACAGGACTCTGACATC...AACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTTGTCACCACCATCAGCACTaGGAGCCATTGACCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: WRETQVIKYQNSRFSWSCHHHQH*EPLTTL Trigger: CAGTGTGGTCAATGGCTCCCAGTGCTGATGGTGGTG...ACAACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR TCA 90 bp | CGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCCCAGGTTTCTCCTTTTaGGGAACTGTAGCTGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RIHLEGNPSYKVPELKVFPGFSF*GTVAAE Trigger: CTCGGCAGCTACAGTTCCTCAAAAGGAGAAACCTGG...GAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR TCA 90 bp | CGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCGTCTGTGTGGCTTCTTaGTGTCAGAGTCCTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RIHLEGNPSYKVPELKVFVCVAS*CQSPVV Trigger: CACCACAGGACTCTGACATCAAGAAGCCACACAGAC...GAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR TCA 90 bp | ATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTCAGCACTTTCTGCAGTaGCGCCTTAGCCTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IWRETQVIKYQNSRFSWSQHFLQ*RLSLLL Trigger: GAGCAGAAGGCTAAGGCGTCACTGCAGAAAGTGCTG...ACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | GGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGCAATGCCTCTTCTaGCTTTGTCTGAGTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GFIWRETQVIKYQNSRFSWQCLF*LCLSAP Trigger: CGGGGCACTCAGACAAAGGCAGAAGAGGCATTGCCA...TGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | GTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTGTGCCCTCTGTAGCTaGTGCTCTGCACACATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VRIHLEGNPSYKVPELKVCALCS*CSAHIF Trigger: GAAAATGTGTGCAGAGCAGCAGCTACAGAGGGCACA...AACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | ATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTCTGACACTTCTGCTCTaGCAAAGCCAGGGACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IWRETQVIKYQNSRFSWSLTLLL*QSQGQL Trigger: CAGCTGTCCCTGGCTTTGGCAGAGCAGAAGTGTCAG...ACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | TCAAGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGCTGACACTTCTGCTCTaGCAAAGCCAGGGACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRFSWSCLHLSFTSDRCQLTLLL*QSQGQL Trigger: CAGCTGTCCCTGGCTTTGGCAGAGCAGAAGTGTCAG...CTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CCA 90 bp | AGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGAAGAGCCGTTCCTTGTGTTaGGTCCTCAGCACCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RFSWSCLHLSFTSDRCQKSRSLC*VLSTFP Trigger: AGGGAAGGTGCTGAGGACCCAACACAAGGAACGGCT...CTTCTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | GGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCAAGCCGTTCCTTGTGTTaGGTCCTCAGCACCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GFIWRETQVIKYQNSRFSSRSLC*VLSTFP Trigger: AGGGAAGGTGCTGAGGACCCAACACAAGGAACGGCT...TGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCACTCCATCTGTCTTGCTaGAGGGCCCTTGTTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPLHLSC*RALVPW Trigger: CCAGGGAACAAGGGCCCTCCAGCAAGACAGATGGAG...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | CGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCGATGTCAGAGTCCTGTaGTGGAAAGGCTCTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RIHLEGNPSYKVPELKVFDVRVL*WKGSPM Trigger: CATGGGAGAGCCTTTCCACCACAGGACTCTGACATC...GAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | AGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGAAGCTTATCCCTGTTTCCTaGTGTCCAGGGAAAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RFSWSCLHLSFTSDRCQKLIPVS*CPGKEA Trigger: GGCCTCTTTCCCTGGACAGCAGGAAACAGGGATAAG...CTTCTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | TCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTCCAGATCCCTCTGGATaGCTGAGGAGGAATGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGFIWRETQVIKYQNSRFPDPSG*LRRNDV Trigger: TACATCATTCCTCCTCAGGCATCCAGAGGGATCTGG...AAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | GGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCAGCCCTCTGTAGCTGCTaGTCTGCACACATTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GFIWRETQVIKYQNSRFSALCSC*SAHIFS Trigger: GGAGAAAATGTGTGCAGAGCAGCAGCTACAGAGGGC...TGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | ATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTGCCCTCTGTAGCTGCTaGTCTGCACACATTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IWRETQVIKYQNSRFSWSALCSC*SAHIFS Trigger: GGAGAAAATGTGTGCAGAGCAGCAGCTACAGAGGGC...ACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | GTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTGTCTGCAGCTCCTGGTaGTCATTTTCTAAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRIHLEGNPSYKVPELKVVCSSW*SFSKSC Trigger: GCAGCTTTTAGAAAATGAGCACCAGGAGCTGCAGAC...AACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTTGTCTCTCGAGTTTGGTCTaGAGCTCCTGGTGCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: WRETQVIKYQNSRFSWSCLSSLV*SSWCSF Trigger: AAATGAGCACCAGGAGCTGCAGACCAAACTCGAGAG...ACAACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | ATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTCAGGTTGCCTTTGTTTaGCAGGAACACTGCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IWRETQVIKYQNSRFSWSQVAFV*QEHCQC Trigger: GCACTGGCAGTGTTCCTGGCAAACAAAGGCAACCTG...ACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CCA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGTCAGAGTCCTGTGGTaGAAAGGCTCTCCCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPVRVLW*KGSPMG Trigger: TCCCATGGGAGAGCCTTTCCACCACAGGACTCTGAC...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | TCAAGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGAAAAGCTGCAGGGCCTaGCTCATCTGTGAGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRFSWSCLHLSFTSDRCQKSCRA*LICESL Trigger: CAGAGACTCACAGATGAGCCAGGCCCTGCAGCTTTT...CTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CCA 90 bp | AGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGAAGAAAAGCTGCAGGGCCTaGCTCATCTGTGAGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RFSWSCLHLSFTSDRCQKKSCRA*LICESL Trigger: CAGAGACTCACAGATGAGCCAGGCCCTGCAGCTTTT...CTTCTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CCA 90 bp | GTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTGTCTCCTTTTGTAGTTaGTCTCTGAGCTCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRIHLEGNPSYKVPELKVVSFCS*SLSSSS Trigger: AGAGGAGGAGCTCAGAGACCAACTACAAAAGGAGAC...AACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CCA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCACACCACCATCAGCACTaGGAGCCATTGACCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPHHHQH*EPLTTL Trigger: CAGTGTGGTCAATGGCTCCCAGTGCTGATGGTGGTG...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR TCA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGTCTGTGTGGCTTCTTaGTGTCAGAGTCCTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPVCVAS*CQSPVV Trigger: CACCACAGGACTCTGACATCAAGAAGCCACACAGAC...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR TCA 90 bp | CATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGCACACAGGCAGACCCTaGTCTTTCTTTAAGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HLEGNPSYKVPELKVFMEHTGRP*SFFKSF Trigger: GAAGCTCTTAAAGAAAGATCAGGGTCTGCCTGTGTG...CTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR TCA 90 bp | CGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCCACACAGGCAGACCCTaGTCTTTCTTTAAGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RIHLEGNPSYKVPELKVFHTGRP*SFFKSF Trigger: GAAGCTCTTAAAGAAAGATCAGGGTCTGCCTGTGTG...GAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | TCAAGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGCCAGATCCCTCTGGATaGCTGAGGAGGAATGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: SRFSWSCLHLSFTSDRCQPDPSG*LRRNDV Trigger: TACATCATTCCTCCTCAGGCATCCAGAGGGATCTGG...CTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTTGTCCTTCTGCTCATAGCTaGTTCTCTGGTCTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: WRETQVIKYQNSRFSWSCPSAHS*FSGLPS Trigger: AGATGGAAGACCAGAGAAGCAGCTATGAGCAGAAGG...ACAACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | GGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGTGCCCTCTGTAGCTaGTGCTCTGCACACATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GFIWRETQVIKYQNSRFSCALCS*CSAHIF Trigger: GAAAATGTGTGCAGAGCAGCAGCTACAGAGGGCACA...TGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | AGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGAAGCTCTCGAGTTTGGTCTaGAGCTCCTGGTGCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RFSWSCLHLSFTSDRCQKLSSLV*SSWCSF Trigger: AAATGAGCACCAGGAGCTGCAGACCAAACTCGAGAG...CTTCTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | CATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGGTAGCTGTTGTACTTTaGTCACCAGGGCCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLEGNPSYKVPELKVFMEVAVVL*SPGPVS Trigger: AGAAACAGGCCCTGGTGAGCAAAGTACAACAGCTAC...CTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | ATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTCAGGAACACTGCCAGTaGTGTAGCAATCACCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: IWRETQVIKYQNSRFSWSQEHCQ*CSNHHH Trigger: ATGGTGGTGATTGCTACAGCACTGGCAGTGTTCCTG...ACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | GGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCAGTTTGCCAGGAACACTaGCAGTGCTGTAGCAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: GFIWRETQVIKYQNSRFSVCQEH*QCCSNH Trigger: GTGATTGCTACAGCACTGGCAGTGTTCCTGGCAAAC...TGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CCA 90 bp | TCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTTGAGGATAGACACTTaGCCTGTTCCTCCATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGFIWRETQVIKYQNSRFLRIDT*PVPPSV Trigger: GACAGATGGAGGAACAGGCCAAGTGTCTATCCTCAA...AAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | TCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTGCAGGCAGGAGGTCCTaGAGAATCACCATTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGFIWRETQVIKYQNSRFAGRRS*RITIFF Trigger: AAAGAAAATGGTGATTCTCCAGGACCTCCTGCCTGC...AAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTTGTGCAGGCAGGAGGTCCTaGAGAATCACCATTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WRETQVIKYQNSRFSWSCAGRRS*RITIFF Trigger: AAAGAAAATGGTGATTCTCCAGGACCTCCTGCCTGC...ACAACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTTGTCTGCTCCCTGTAGTTTaGACTGAAGCACATGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WRETQVIKYQNSRFSWSCLLPVV*TEAHAV Trigger: AACTGCATGTGCTTCAGTCCAAACTACAGGGAGCAG...ACAACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR TCA 90 bp | TCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCTGACTTCTTTAGTTaGTCTTGTAGGTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGFIWRETQVIKYQNSRFSDFFS*SCRSWV Trigger: GACCCAGGACCTACAAGATCAACTAAAGAAGTCAGA...AAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR TCA 90 bp | TCAAGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGTTTGTAGTTGGTCTCTaGGCTCCTCCTCTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRFSWSCLHLSFTSDRCQFVVGL*APPLSP Trigger: AGGAGAAAGAGGAGGAGCTCAGAGACCAACTACAAA...CTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | CTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCCTAGGGATCTTAGTTTaGCCTTCAGCTTGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRVRIHLEGNPSYKVPELLGILV*PSACLH Trigger: ATGAAGACAAGCTGAAGGGCAAACTAAGATCCCTAG...GAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | AAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAATCATCTGTGAGTCTCTaGTGTCTGCTCCCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLRVRIHLEGNPSYKVPESSVSL*CLLPVV Trigger: AACTACAGGGAGCAGACAGCAGAGACTCACAGATGA...TTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | ATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTTCATCTGTGAGTCTCTaGTGTCTGCTCCCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IWRETQVIKYQNSRFSWSSSVSL*CLLPVV Trigger: AACTACAGGGAGCAGACAGCAGAGACTCACAGATGA...ACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | ATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTGTCTGCAGCTCCTGGTaGTCATTTTCTAAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IWRETQVIKYQNSRFSWSVCSSW*SFSKSC Trigger: GCAGCTTTTAGAAAATGAGCACCAGGAGCTGCAGAC...ACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | GGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCAGTAGCTGTTGTACTTTaGTCACCAGGGCCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFIWRETQVIKYQNSRFSVAVVL*SPGPVS Trigger: AGAAACAGGCCCTGGTGAGCAAAGTACAACAGCTAC...TGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | TCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTCTTTCTCCTTTCTTGTaGCCTCAGGCTTCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGFIWRETQVIKYQNSRFLSPFL*PQASLH Trigger: ATGAAGTGAAGCCTGAGGGCACAAGAAAGGAGAAAG...AAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CCA 90 bp | TCAAGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGCTGCTCCCTGTAGTTTaGACTGAAGCACATGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRFSWSCLHLSFTSDRCQLLPVV*TEAHAV Trigger: AACTGCATGTGCTTCAGTCCAAACTACAGGGAGCAG...CTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CCA 90 bp | ATAGATGCCAGAAGTTCTTCAGATGACCAGGTTGCCTTTGTTTGCCAGGAACACACTTGGTTTGCTGACTaGCATCATTCTTTATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IDARSSSDDQVAFVCQEHTWFAD*HHSLLL Trigger: CAACAATAAAGAATGATGCCAGTCAGCAAACCAAGT...GTGTTCCTGGCAAACAAAGGCAACCTGGTCATCTGAAGAACTTCTGGCATCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | TCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTCTTTATTGTTGGCAATaGCTCTTCTGCCTTTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGFIWRETQVIKYQNSRFLYCWQ*LFCLCL Trigger: CAGACAAAGGCAGAAGAGGCATTGCCAACAATAAAG...AAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | GCAGACCCTGATCTTTCTTTAAGAGCTTCTCCTGTTCTTGAAGTTGTAAGGATTCTTTATTGTTGGCAATaGCTCTTCTGCCTTTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ADPDLSLRASPVLEVVRILYCWQ*LFCLCL Trigger: CAGACAAAGGCAGAAGAGGCATTGCCAACAATAAAG...AATCCTTACAACTTCAAGAACAGGAGAAGCTCTTAAAGAAAGATCAGGGTCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCACCTTCTGCTCATAGCTaGTTCTCTGGTCTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPPSAHS*FSGLPS Trigger: AGATGGAAGACCAGAGAAGCAGCTATGAGCAGAAGG...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | GGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCACTTTCTCCTTTCTTGTaGCCTCAGGCTTCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GFIWRETQVIKYQNSRFSLSPFL*PQASLH Trigger: ATGAAGTGAAGCCTGAGGGCACAAGAAAGGAGAAAG...TGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CCA 90 bp | AGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGAAGCAGCAACTCCACATTTaGTTTGCTGACTGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RFSWSCLHLSFTSDRCQKQQLHI*FADWHH Trigger: ATGATGCCAGTCAGCAAACCAAATGTGGAGTTGCTG...CTTCTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CCA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGTCTCCTTTTGTAGTTaGTCTCTGAGCTCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPVSFCS*SLSSSS Trigger: AGAGGAGGAGCTCAGAGACCAACTACAAAAGGAGAC...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR TCA 90 bp | TCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTATGTAAGGCTTCTTTaGGGTATTCCGAGAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGFIWRETQVIKYQNSRFYVRLL*GIPRVE Trigger: TTCAACTCTCGGAATACCTCAAAGAAGCCTTACATA...AAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR TCA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCATCTGACTTCTTTAGTTaGTCTTGTAGGTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPSDFFS*SCRSWV Trigger: GACCCAGGACCTACAAGATCAACTAAAGAAGTCAGA...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR GCA 90 bp | TCAAGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGCTTTATTGTTGGCAATaGCTCTTCTGCCTTTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRFSWSCLHLSFTSDRCQLYCWQ*LFCLCL Trigger: CAGACAAAGGCAGAAGAGGCATTGCCAACAATAAAG...CTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR GCA 90 bp | AAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTAGGGATCTTAGTTTaGCCTTCAGCTTGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLRVRIHLEGNPSYKVPELGILV*PSACLH Trigger: ATGAAGACAAGCTGAAGGGCAAACTAAGATCCCTAG...TTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR TCA 90 bp | TCAAGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGTATGTAAGGCTTCTTTaGGGTATTCCGAGAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRFSWSCLHLSFTSDRCQYVRLL*GIPRVE Trigger: TTCAACTCTCGGAATACCTCAAAGAAGCCTTACATA...CTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CCA 90 bp | TCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTATCATTCTTTATTGTTaGCAATGCCTCTTCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGFIWRETQVIKYQNSRFIILYC*QCLFCL Trigger: AAGGCAGAAGAGGCATTGCCAACAATAAAGAATGAT...AAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | TCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTATTTGGTTTGCTGACTaGCATCATTCTTTATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGFIWRETQVIKYQNSRFIWFAD*HHSLLL Trigger: CAACAATAAAGAATGATGCCAGTCAGCAAACCAAAT...AAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| 3UTR CAA 72 bp | ATAAAGTACCAGAACTCAAGGTTTTCATGGAGTTGTTaGCATCTGAGTTTTACTTCAGATAGATGCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IKYQNSRFSWSC*HLSFTSDRCQK Trigger: CTTCTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCTTGAGTTCTGGTACTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | ATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGATCATTCTTTATTGTTaGCAATGCCTCTTCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IHLEGNPSYKVPELKVFMIILYC*QCLFCL Trigger: AAGGCAGAAGAGGCATTGCCAACAATAAAGAATGAT...CATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CCA 90 bp | GGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCAATTTGGTTTGCTGACTaGCATCATTCTTTATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFIWRETQVIKYQNSRFSIWFAD*HHSLLL Trigger: CAACAATAAAGAATGATGCCAGTCAGCAAACCAAAT...TGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS CCA 90 bp | GGCGGCGGCGACGGTTTTCTCGGGTCTCCTGACGTCGCTCACACTTaGCCTCATAGCTCTCAGCCCACCGAGCCAAGCCAGGGGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: GGGDGFLGSPDVAHT*PHSSQPTEPSQGRT Trigger: GGTCCTCCCCTGGCTTGGCTCGGTGGGCTGAGAGCTATGAGGCCAAGTGTGAGCGACGTCAGGAGACCCGAGAAAACCGTCGCCGCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS GCA 90 bp | GTTGGGTCCTCAGCACCTTCCCTGGCTGGCGGCAAGTGGTCTCATTaGGGCGGCGGCGACGGTTTTCTCGGGTCTCCTGACGTCGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VGSSAPSLAGGKWSH*GGGDGFLGSPDVAH Trigger: GTGAGCGACGTCAGGAGACCCGAGAAAACCGTCGCCGCCGCCGCAATGAGACCACTTGCCGCCAGCCAGGGAAGGTGCTGAGGACCCAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043550.11 ENSMUST00000161367.2 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS CCA 90 bp | GTTCCTTGTGTTGGGTCCTCAGCACCTTCCCTGGCTGGCGGCAAGTaGTCTCATTGCGGCGGCGGCGACGGTTTTCTCGGGTCTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VPCVGSSAPSLAGGK*SHCGGGDGFLGSPD Trigger: GTCAGGAGACCCGAGAAAACCGTCGCCGCCGCCGCAATGAGACCACTTGCCGCCAGCCAGGGAAGGTGCTGAGGACCCAACACAAGGAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043550.11 ENSMUST00000161367.2 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS CCA 90 bp | AGCTCCCTGAAGCCGTTCCTTGTGTTGGGTCCTCAGCACCTTCCCTaGCTGGCGGCAAGTGGTCTCATTGCGGCGGCGGCGACGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSLKPFLVLGPQHLP*LAASGLIAAAATVF Trigger: GAAAACCGTCGCCGCCGCCGCAATGAGACCACTTGCCGCCAGCCAGGGAAGGTGCTGAGGACCCAACACAAGGAACGGCTTCAGGGAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043550.11 ENSMUST00000161367.2 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS CCA 90 bp | GCCCCGGTGCTGTCTGTGTGGCTTCTTGATGTCAGAGTCCTGTGGTaGAAAGGCTCTCCCATGGGAGGCATGGTGGCCACCCAGATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: APVLSVWLLDVRVLW*KGSPMGGMVATQIP Trigger: AGGGATCTGGGTGGCCACCATGCCTCCCATGGGAGAGCCTTTCCACCACAGGACTCTGACATCAAGAAGCCACACAGACAGCACCGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS CCA 90 bp | AGTGCCCCGGTGCTGTCTGTGTGGCTTCTTGATGTCAGAGTCCTGTaGTGGAAAGGCTCTCCCATGGGAGGCATGGTGGCCACCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: SAPVLSVWLLDVRVL*WKGSPMGGMVATQI Trigger: GATCTGGGTGGCCACCATGCCTCCCATGGGAGAGCCTTTCCACCACAGGACTCTGACATCAAGAAGCCACACAGACAGCACCGGGGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS CCA 90 bp | TGTGGCTTCTTGATGTCAGAGTCCTGTGGTGGAAAGGCTCTCCCATaGGAGGCATGGTGGCCACCCAGATCCCTCTGGATGCCTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CGFLMSESCGGKALP*EAWWPPRSLWMPEE Trigger: CTCCTCAGGCATCCAGAGGGATCTGGGTGGCCACCATGCCTCCCATGGGAGAGCCTTTCCACCACAGGACTCTGACATCAAGAAGCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS CCA 90 bp | GAGGCCTTGTTGGCACCAGGCAAGGACTCCTTGAGGATAGACACTTaGCCTGTTCCTCCATCTGTCTTGCTGGAGGGCCCTTGTTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EALLAPGKDSLRIDT*PVPPSVLLEGPCSL Trigger: CAGGGAACAAGGGCCCTCCAGCAAGACAGATGGAGGAACAGGCCAAGTGTCTATCCTCAAGGAGTCCTTGCCTGGTGCCAACAAGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043550.11 ENSMUST00000161367.2 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | CTGCCAAAGCCAGGGACAGCTGTGCCCTCTGTAGCTGCTGCTCTGCACACATTTGTTCCTCCATCTGTCTaGCTGGAGGGCCCTTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPKPGTAVPSVAAALHTFVPPSV*LEGPCS Trigger: GGAACAAGGGCCCTCCAGCAAGACAGATGGAGGAAC...AAATGTGTGCAGAGCAGCAGCTACAGAGGGCACAGCTGTCCCTGGCTTTGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | TTCTCAGAACGTTCCCCTACCTCCCTGACTTCACAGACTCGGGAGTGGATGGGATGCAGGCTCTCGAGTTaGGTCTGCAGCTCCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSERSPTSLTSQTREWMGCRLSS*VCSSWC Trigger: GCACCAGGAGCTGCAGACCAAACTCGAGAGCCTGCA...TCCCATCCACTCCCGAGTCTGTGAAGTCAGGGAGGTAGGGGAACGTTCTGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160302.4 |
||
| CDS TCA 90 bp | TCTTCCAGGTTTCTCCTTTTGAGGAACTGTAGCTGCCGAGCTCCCTaGAGCCGTTCCTTGTGTTGGGTCCTCAGCACCTTCCCTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSRFLLLRNCSCRAP*SRSLCWVLSTFPGW Trigger: CCAGCCAGGGAAGGTGCTGAGGACCCAACACAAGGAACGGCTTCAGGGAGCTCGGCAGCTACAGTTCCTCAAAAGGAGAAACCTGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043550.11 ENSMUST00000161367.2 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS TCA 90 bp | GAGGCATGGTGGCCACCCAGATCCCTCTGGATGCCTGAGGAGGAATaGTGTAAGGCCGGGAAAACCTCAGAGCTTATCCCTGTTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EAWWPPRSLWMPEEE*CKAGKTSELIPVSC Trigger: GCAGGAAACAGGGATAAGCTCTGAGGTTTTCCCGGCCTTACATCATTCCTCCTCAGGCATCCAGAGGGATCTGGGTGGCCACCATGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS TCA 90 bp | CTTCTGCCTTTGTCTGAGTGCCCCGGTGCTGTCTGTGTGGCTTCTTaGTGTCAGAGTCCTGTGGTGGAAAGGCTCTCCCATGGGAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLPLSECPGAVCVAS*CQSPVVERLSHGRH Trigger: ATGCCTCCCATGGGAGAGCCTTTCCACCACAGGACTCTGACATCAAGAAGCCACACAGACAGCACCGGGGCACTCAGACAAAGGCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | CCCCACAGTTTATATACCTCCCAGAGCAGGTGGCTGGCTGAAGTGTCCAGGCCACTGAAGCACATGCAGTaGGCTCTCCAGCTCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PHSLYTSQSRWLAEVSRPLKHMQ*ALQLSV Trigger: CACAGAGAGCTGGAGAGCCAACTGCATGTGCTTCAG...TGGCCTGGACACTTCAGCCAGCCACCTGCTCTGGGAGGTATATAAACTGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160302.4 |
||
| CDS CCA 90 bp | CAATGCCTCTTCTGCCTTTGTCTGAGTGCCCCGGTGCTGTCTGTGTaGCTTCTTGATGTCAGAGTCCTGTGGTGGAAAGGCTCTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: QCLFCLCLSAPVLSV*LLDVRVLWWKGSPM Trigger: CATGGGAGAGCCTTTCCACCACAGGACTCTGACATCAAGAAGCCACACAGACAGCACCGGGGCACTCAGACAAAGGCAGAAGAGGCATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | GTTGCCTTTGTTTGCCAGGAACACTGCCAGTGCTGTAGCAATCACCACCATCAGATGCCTCTTCTGCCTTaGTCTGAGTGCCCCGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VAFVCQEHCQCCSNHHHQMPLLP*SECPGA Trigger: AGCACCGGGGCACTCAGACAAAGGCAGAAGAGGCAT...CTGATGGTGGTGATTGCTACAGCACTGGCAGTGTTCCTGGCAAACAAAGGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | CCAGAAGTTCTTCAGATGACCAGGTTGCCTTTGTTTGCCAGGAACACTGCCAGTAAGCCGTTCCTTGTGTaGGGTCCTCAGCACCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PEVLQMTRLPLFARNTASKPFLV*GPQHLP Trigger: GGGAAGGTGCTGAGGACCCAACACAAGGAACGGCTT...ACTGGCAGTGTTCCTGGCAAACAAAGGCAACCTGGTCATCTGAAGAACTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
||
| CDS GCA 90 bp | GGTTTGCTGACTGGCATCATTCTTTATTGTTGGCAATGCCTCTTCTaGCTTTGTCTGAGTGCCCCGGTGCTGTCTGTGTGGCTTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLLTGIILYCWQCLF*LCLSAPVLSVWLLD Trigger: ATCAAGAAGCCACACAGACAGCACCGGGGCACTCAGACAAAGGCAGAAGAGGCATTGCCAACAATAAAGAATGATGCCAGTCAGCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS GCA 90 bp | TCCACATTTGGTTTGCTGACTGGCATCATTCTTTATTGTTGGCAATaGCTCTTCTGCCTTTGTCTGAGTGCCCCGGTGCTGTCTGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: STFGLLTGIILYCWQ*LFCLCLSAPVLSVW Trigger: CCACACAGACAGCACCGGGGCACTCAGACAAAGGCAGAAGAGGCATTGCCAACAATAAAGAATGATGCCAGTCAGCAAACCAAATGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CAA 90 bp | CATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGCTTGCTGGAGGGCCCTaGTTCCCTGGCTTGGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HLEGNPSYKVPELKVFMELAGGP*FPGLAF Trigger: AAAGGCCAAGCCAGGGAACAAGGGCCCTCCAGCAAG...CTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | TGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTTGTCTTGCTGGAGGGCCCTaGTTCCCTGGCTTGGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: WRETQVIKYQNSRFSWSCLAGGP*FPGLAF Trigger: AAAGGCCAAGCCAGGGAACAAGGGCCCTCCAGCAAG...ACAACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | CATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGGGGAAAGAGGCCTTGTaGGCACCAGGCAAGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: HLEGNPSYKVPELKVFMEGKEAL*APGKDS Trigger: GGAGTCCTTGCCTGGTGCCAACAAGGCCTCTTTCCC...CTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | TCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTCCAGGGAAAGAGGCCTaGTTGGCACCAGGCAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SGFIWRETQVIKYQNSRFPGKEA*LAPGKD Trigger: GTCCTTGCCTGGTGCCAACAAGGCCTCTTTCCCTGG...AAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | CTCCTGAAGTTTAATATGCGGGATGAATTTGAGGAGCAGGCTCCCTGCAAGTGGAGTTTGCCCTTCAGCTaGTCTTCATTAAGCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLKFNMRDEFEEQAPCKWSLPFS*SSLSCP Trigger: GGGACAGCTTAATGAAGACAAGCTGAAGGGCAAACT...CCACTTGCAGGGAGCCTGCTCCTCAAATTCATCCCGCATATTAAACTTCAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162480.3 |
||
| CDS-3UTR CAA 90 bp | CATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGAAGCCGTTCCTTGTGTaGGGTCCTCAGCACCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HLEGNPSYKVPELKVFMEKPFLV*GPQHLP Trigger: GGGAAGGTGCTGAGGACCCAACACAAGGAACGGCTT...CTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | TGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTTGTGTTCCTCCATCTGTCTaGCTGGAGGGCCCTTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WRETQVIKYQNSRFSWSCVPPSV*LEGPCS Trigger: GGAACAAGGGCCCTCCAGCAAGACAGATGGAGGAAC...ACAACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | AGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGAAGGGGAAAGAGGCCTTGTaGGCACCAGGCAAGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: RFSWSCLHLSFTSDRCQKGKEAL*APGKDS Trigger: GGAGTCCTTGCCTGGTGCCAACAAGGCCTCTTTCCC...CTTCTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | ATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTCCAGGGAAAGAGGCCTaGTTGGCACCAGGCAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: IWRETQVIKYQNSRFSWSPGKEA*LAPGKD Trigger: GTCCTTGCCTGGTGCCAACAAGGCCTCTTTCCCTGG...ACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | CATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGATGCCTCTTCTGCCTTaGTCTGAGTGCCCCGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HLEGNPSYKVPELKVFMEMPLLP*SECPGA Trigger: AGCACCGGGGCACTCAGACAAAGGCAGAAGAGGCAT...CTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | AAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAATGCAGGCTCTCGAGTTaGGTCTGCAGCTCCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KLRVRIHLEGNPSYKVPECRLSS*VCSSWC Trigger: GCACCAGGAGCTGCAGACCAAACTCGAGAGCCTGCA...TTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CAA 90 bp | AGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGAAGTGCAGGCTCTCGAGTTaGGTCTGCAGCTCCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RFSWSCLHLSFTSDRCQKCRLSS*VCSSWC Trigger: GCACCAGGAGCTGCAGACCAAACTCGAGAGCCTGCA...CTTCTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CAA 90 bp | TCAAGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGAAGCCGTTCCTTGTGTaGGGTCCTCAGCACCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SRFSWSCLHLSFTSDRCQKPFLV*GPQHLP Trigger: GGGAAGGTGCTGAGGACCCAACACAAGGAACGGCTT...CTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | ATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGCTTGCTGGAGGGCCCTaGTTCCCTGGCTTGGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IHLEGNPSYKVPELKVFMLAGGP*FPGLAF Trigger: AAAGGCCAAGCCAGGGAACAAGGGCCCTCCAGCAAG...CATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCACCAGGGAAAGAGGCCTaGTTGGCACCAGGCAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPPGKEA*LAPGKD Trigger: GTCCTTGCCTGGTGCCAACAAGGCCTCTTTCCCTGG...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | AAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAAATGCCTCTTCTGCCTTaGTCTGAGTGCCCCGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KLRVRIHLEGNPSYKVPEMPLLP*SECPGA Trigger: AGCACCGGGGCACTCAGACAAAGGCAGAAGAGGCAT...TTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | CATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGCTGAAGCACATGCAGTaGGCTCTCCAGCTCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HLEGNPSYKVPELKVFMELKHMQ*ALQLSV Trigger: CACAGAGAGCTGGAGAGCCAACTGCATGTGCTTCAG...CTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CAA 90 bp | TCAAGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGCAGCACTGGGAGCCATaGACCACACTGCAGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SRFSWSCLHLSFTSDRCQQHWEP*TTLQLL Trigger: AAGGAGCTGCAGTGTGGTCAATGGCTCCCAGTGCTG...CTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CAA 90 bp | CTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCTCCAGGTTTCTCCTTTaGAGGAACTGTAGCTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LRVRIHLEGNPSYKVPELSRFLL*RNCSCR Trigger: TCGGCAGCTACAGTTCCTCAAAAGGAGAAACCTGGA...GAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGTTCCTCCATCTGTCTaGCTGGAGGGCCCTTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPVPPSV*LEGPCS Trigger: GGAACAAGGGCCCTCCAGCAAGACAGATGGAGGAAC...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | CTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCCTTGAGGATAGACACTaGGCCTGTTCCTCCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LRVRIHLEGNPSYKVPELLEDRH*ACSSIC Trigger: ACAGATGGAGGAACAGGCCAAGTGTCTATCCTCAAG...GAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | GTACTTCTCATTGAGGATGTCTATTCTGAATGCAGTTCTCTGCACTCCTTTTCCCTTGAGGATAGACACTaGGCCTGTTCCTCCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VLLIEDVYSECSSLHSFSLEDRH*ACSSIC Trigger: ACAGATGGAGGAACAGGCCAAGTGTCTATCCTCAAG...GGAAAAGGAGTGCAGAGAACTGCATTCAGAATAGACATCCTCAATGAGAAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | AAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTGAAGCACATGCAGTaGGCTCTCCAGCTCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KLRVRIHLEGNPSYKVPELKHMQ*ALQLSV Trigger: CACAGAGAGCTGGAGAGCCAACTGCATGTGCTTCAG...TTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CAA 90 bp | ATAAAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCACAGCACTGGGAGCCATaGACCACACTGCAGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: IKLRVRIHLEGNPSYKVPQHWEP*TTLQLL Trigger: AAGGAGCTGCAGTGTGGTCAATGGCTCCCAGTGCTG...TGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CAA 90 bp | CGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCCTTGAGGATAGACACTaGGCCTGTTCCTCCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RIHLEGNPSYKVPELKVFLEDRH*ACSSIC Trigger: ACAGATGGAGGAACAGGCCAAGTGTCTATCCTCAAG...GAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | TGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTTGTTGTCTGTGTGGCTTCTaGATGTCAGAGTCCTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: WRETQVIKYQNSRFSWSCCLCGF*MSESCG Trigger: ACCACAGGACTCTGACATCAAGAAGCCACACAGACA...ACAACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | CGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCTGTCTGTGTGGCTTCTaGATGTCAGAGTCCTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RIHLEGNPSYKVPELKVFCLCGF*MSESCG Trigger: ACCACAGGACTCTGACATCAAGAAGCCACACAGACA...GAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
||
| CDS-3UTR CAA 90 bp | AGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGAAGATGACCAGGTTGCCTTaGTTTGCCAGGAACACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RFSWSCLHLSFTSDRCQKMTRLP*FARNTA Trigger: GGCAGTGTTCCTGGCAAACAAAGGCAACCTGGTCAT...CTTCTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CAA 90 bp | AAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAAATGACCAGGTTGCCTTaGTTTGCCAGGAACACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KLRVRIHLEGNPSYKVPEMTRLP*FARNTA Trigger: GGCAGTGTTCCTGGCAAACAAAGGCAACCTGGTCAT...TTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
||
| CDS-3UTR CAA 90 bp | ATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGTTCCAGGTTTCTCCTTTaGAGGAACTGTAGCTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: IWRETQVIKYQNSRFSWSSRFLL*RNCSCR Trigger: TCGGCAGCTACAGTTCCTCAAAAGGAGAAACCTGGA...ACTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS-3UTR CAA 90 bp | CATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGAGTTTGCCCTTCAGCTaGTCTTCATTAAGCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: HLEGNPSYKVPELKVFMESLPFS*SSLSCP Trigger: GGGACAGCTTAATGAAGACAAGCTGAAGGGCAAACT...CTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
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| CDS-3UTR CAA 90 bp | TCAAGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGCCTCTTTCTCCTTTCTaGTGCCCTCAGGCTTCACTT | + |
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Preference number: 5 (lower is better) Translates to: SRFSWSCLHLSFTSDRCQPLSPF*CPQASL Trigger: AAGTGAAGCCTGAGGGCACAAGAAAGGAGAAAGAGG...CTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
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| CDS-3UTR CAA 90 bp | AGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGAAGCCTCTTTCTCCTTTCTaGTGCCCTCAGGCTTCACTT | + |
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Preference number: 5 (lower is better) Translates to: RFSWSCLHLSFTSDRCQKPLSPF*CPQASL Trigger: AAGTGAAGCCTGAGGGCACAAGAAAGGAGAAAGAGG...CTTCTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
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| CDS-3UTR CAA 90 bp | GTACTTCTCATTGAGGATGTCTATTCTGAATGCAGTTCTCTGCACTCCTTTTCCTGGCATCATTCTTTATaGTTGGCAATGCCTCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: VLLIEDVYSECSSLHSFSWHHSL*LAMPLL Trigger: CAGAAGAGGCATTGCCAACAATAAAGAATGATGCCA...GGAAAAGGAGTGCAGAGAACTGCATTCAGAATAGACATCCTCAATGAGAAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194278.6 |
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| CDS-3UTR CAA 90 bp | AGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGAAGAGTTTGCCCTTCAGCTaGTCTTCATTAAGCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: RFSWSCLHLSFTSDRCQKSLPFS*SSLSCP Trigger: GGGACAGCTTAATGAAGACAAGCTGAAGGGCAAACT...CTTCTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
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| CDS-3UTR CAA 90 bp | CATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGAGCTCCTTTTCCTTGACTaGGAGCTGAAATGTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: HLEGNPSYKVPELKVFMELLFLD*ELKCLL Trigger: AAGGAGACATTTCAGCTCCAAGTCAAGGAAAAGGAG...CTCCATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
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| CDS-3UTR CAA 90 bp | TCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTGGCATCATTCTTTATaGTTGGCAATGCCTCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: SGFIWRETQVIKYQNSRFWHHSL*LAMPLL Trigger: CAGAAGAGGCATTGCCAACAATAAAGAATGATGCCA...AAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS-3UTR CAA 90 bp | AAACTAAGAGTCCGGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCCTTTTCCTTGACTaGGAGCTGAAATGTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: KLRVRIHLEGNPSYKVPELLFLD*ELKCLL Trigger: AAGGAGACATTTCAGCTCCAAGTCAAGGAAAAGGAG...TTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCCGGACTCTTAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
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| CDS-3UTR CAA 90 bp | GGATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGGCATCATTCTTTATaGTTGGCAATGCCTCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: GFIWRETQVIKYQNSRFSWHHSL*LAMPLL Trigger: CAGAAGAGGCATTGCCAACAATAAAGAATGATGCCA...TGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS-3UTR CAA 90 bp | TCAAGGTTTTCATGGAGTTGTTTGCATCTGAGTTTTACTTCAGATAGATGCCAGAACTCCACATTTGGTTaGCTGACTGGCATCATTCTT | + |
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Preference number: 5 (lower is better) Translates to: SRFSWSCLHLSFTSDRCQNSTFG*LTGIIL Trigger: AAGAATGATGCCAGTCAGCAAACCAAATGTGGAGTT...CTGGCATCTATCTGAAGTAAAACTCAGATGCAAACAACTCCATGAAAACCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
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| CDS-3UTR CAA 90 bp | ATTCATTTGGAGGGAAACCCAAGTTATAAAGTACCAGAACTCAAGGTTTTCATGAACTCCACATTTGGTTaGCTGACTGGCATCATTCTT | + |
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Preference number: 5 (lower is better) Translates to: IHLEGNPSYKVPELKVFMNSTFG*LTGIIL Trigger: AAGAATGATGCCAGTCAGCAAACCAAATGTGGAGTT...CATGAAAACCTTGAGTTCTGGTACTTTATAACTTGGGTTTCCCTCCAAATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
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| CDS CCA 72 bp | GTTGGGTCCTCAGCACCTTCCCTGGCTGGCGGCAAGTaGTCTCATTGCGGCGGCGGCGACGGTTTTCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: VGSSAPSLAGGK*SHCGGGDGFLG Trigger: CCCGAGAAAACCGTCGCCGCCGCCGCAATGAGACCACTTGCCGCCAGCCAGGGAAGGTGCTGAGGACCCAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043550.11 ENSMUST00000161367.2 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS CCA 72 bp | CGTTCCTTGTGTTGGGTCCTCAGCACCTTCCCTGGCTaGCGGCAAGTGGTCTCATTGCGGCGGCGGCGACGG | + |
|
Preference number: 6 (lower is better) Translates to: RSLCWVLSTFPG*RQVVSLRRRRR Trigger: CCGTCGCCGCCGCCGCAATGAGACCACTTGCCGCCAGCCAGGGAAGGTGCTGAGGACCCAACACAAGGAACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043550.11 ENSMUST00000161367.2 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS GCA 72 bp | TCAGCACCTTCCCTGGCTGGCGGCAAGTGGTCTCATTaGGGCGGCGGCGACGGTTTTCTCGGGTCTCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SAPSLAGGKWSH*GGGDGFLGSPD Trigger: GTCAGGAGACCCGAGAAAACCGTCGCCGCCGCCGCAATGAGACCACTTGCCGCCAGCCAGGGAAGGTGCTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043550.11 ENSMUST00000161367.2 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS CCA 72 bp | AAGCCGTTCCTTGTGTTGGGTCCTCAGCACCTTCCCTaGCTGGCGGCAAGTGGTCTCATTGCGGCGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: KPFLVLGPQHLP*LAASGLIAAAA Trigger: CGCCGCCGCCGCAATGAGACCACTTGCCGCCAGCCAGGGAAGGTGCTGAGGACCCAACACAAGGAACGGCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043550.11 ENSMUST00000161367.2 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS CCA 72 bp | GACGGTTTTCTCGGGTCTCCTGACGTCGCTCACACTTaGCCTCATAGCTCTCAGCCCACCGAGCCAAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: DGFLGSPDVAHT*PHSSQPTEPSQ Trigger: CTGGCTTGGCTCGGTGGGCTGAGAGCTATGAGGCCAAGTGTGAGCGACGTCAGGAGACCCGAGAAAACCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS CCA 72 bp | TTGATGTCAGAGTCCTGTGGTGGAAAGGCTCTCCCATaGGAGGCATGGTGGCCACCCAGATCCCTCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LMSESCGGKALP*EAWWPPRSLWM Trigger: CATCCAGAGGGATCTGGGTGGCCACCATGCCTCCCATGGGAGAGCCTTTCCACCACAGGACTCTGACATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS CAA 90 bp | AGAGGCCTTGTTGGCACCAGGCAAGGACTCCTTGAGGATAGACACTaGGCCTGTTCCTCCATCTGTCTTGCTGGAGGGCCCTTGTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: RGLVGTRQGLLEDRH*ACSSICLAGGPLFP Trigger: AGGGAACAAGGGCCCTCCAGCAAGACAGATGGAGGAACAGGCCAAGTGTCTATCCTCAAGGAGTCCTTGCCTGGTGCCAACAAGGCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043550.11 ENSMUST00000161367.2 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS GCA 72 bp | AAGGCCGGGAAAACCTCAGAGCTTATCCCTGTTTCCTaGTGTCCAGGGAAAGAGGCCTTGTTGGCACCAGGC | + |
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Preference number: 6 (lower is better) Translates to: KAGKTSELIPVS*CPGKEALLAPG Trigger: GCCTGGTGCCAACAAGGCCTCTTTCCCTGGACAGCAGGAAACAGGGATAAGCTCTGAGGTTTTCCCGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS CAA 90 bp | TGCTGTCCAGGGAAAGAGGCCTTGTTGGCACCAGGCAAGGACTCCTaGAGGATAGACACTTGGCCTGTTCCTCCATCTGTCTTGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CCPGKEALLAPGKDS*RIDTWPVPPSVLLE Trigger: CTCCAGCAAGACAGATGGAGGAACAGGCCAAGTGTCTATCCTCAAGGAGTCCTTGCCTGGTGCCAACAAGGCCTCTTTCCCTGGACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043550.11 ENSMUST00000161367.2 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS TCA 72 bp | TTGTCTGAGTGCCCCGGTGCTGTCTGTGTGGCTTCTTaGTGTCAGAGTCCTGTGGTGGAAAGGCTCTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: LSECPGAVCVAS*CQSPVVERLSH Trigger: ATGGGAGAGCCTTTCCACCACAGGACTCTGACATCAAGAAGCCACACAGACAGCACCGGGGCACTCAGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS CAA 72 bp | TTGGCCTGTTCCTCCATCTGTCTTGCTGGAGGGCCCTaGTTCCCTGGCTTGGCCTTTCTTCTCTTCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LACSSICLAGGP*FPGLAFLLFFQ Trigger: CTGGAAGAAGAGAAGAAAGGCCAAGCCAGGGAACAAGGGCCCTCCAGCAAGACAGATGGAGGAACAGGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043550.11 ENSMUST00000161367.2 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS CAA 72 bp | GGGAAAGAGGCCTTGTTGGCACCAGGCAAGGACTCCTaGAGGATAGACACTTGGCCTGTTCCTCCATCTGTC | + |
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Preference number: 6 (lower is better) Translates to: GKEALLAPGKDS*RIDTWPVPPSV Trigger: GACAGATGGAGGAACAGGCCAAGTGTCTATCCTCAAGGAGTCCTTGCCTGGTGCCAACAAGGCCTCTTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043550.11 ENSMUST00000161367.2 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS CAA 72 bp | CAGCAACTCCACATCTGCTGTCCAGGGAAAGAGGCCTaGTTGGCACCAGGCAAGGACTCCTTGAGGATAGAC | + |
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Preference number: 6 (lower is better) Translates to: QQLHICCPGKEA*LAPGKDSLRID Trigger: GTCTATCCTCAAGGAGTCCTTGCCTGGTGCCAACAAGGCCTCTTTCCCTGGACAGCAGATGTGGAGTTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161367.2 |
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| CDS CAA 90 bp | CTAGGACAGCAACTCCACATCTGCTGTCCAGGGAAAGAGGCCTTGTaGGCACCAGGCAAGGACTCCTTGAGGATAGACACTTGGCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: LGQQLHICCPGKEAL*APGKDSLRIDTWPV Trigger: AACAGGCCAAGTGTCTATCCTCAAGGAGTCCTTGCCTGGTGCCAACAAGGCCTCTTTCCCTGGACAGCAGATGTGGAGTTGCTGTCCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161367.2 |
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| CDS CAA 90 bp | TGTCTAGGACAGCAACTCCACATCTGCTGTCCAGGGAAAGAGGCCTaGTTGGCACCAGGCAAGGACTCCTTGAGGATAGACACTTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CLGQQLHICCPGKEA*LAPGKDSLRIDTWP Trigger: AGGCCAAGTGTCTATCCTCAAGGAGTCCTTGCCTGGTGCCAACAAGGCCTCTTTCCCTGGACAGCAGATGTGGAGTTGCTGTCCTAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161367.2 |
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| CDS TCA 72 bp | TTTCTCCTTTTGAGGAACTGTAGCTGCCGAGCTCCCTaGAGCCGTTCCTTGTGTTGGGTCCTCAGCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FLLLRNCSCRAP*SRSLCWVLSTF Trigger: GAAGGTGCTGAGGACCCAACACAAGGAACGGCTTCAGGGAGCTCGGCAGCTACAGTTCCTCAAAAGGAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043550.11 ENSMUST00000161367.2 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS CCA 72 bp | CACTGCCAGTGCTGTAGCAATCACCACCATCAGCACTaGGAGCCATTGACCACACTGCAGCTCCTTTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: HCQCCSNHHHQH*EPLTTLQLLFL Trigger: AAGGAAAAGGAGCTGCAGTGTGGTCAATGGCTCCCAGTGCTGATGGTGGTGATTGCTACAGCACTGGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
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| CDS CAA 72 bp | ATCCCTGTTTCCTGCTGTCCAGGGAAAGAGGCCTTGTaGGCACCAGGCAAGGACTCCTTGAGGATAGACACT | + |
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Preference number: 6 (lower is better) Translates to: IPVSCCPGKEAL*APGKDSLRIDT Trigger: AGTGTCTATCCTCAAGGAGTCCTTGCCTGGTGCCAACAAGGCCTCTTTCCCTGGACAGCAGGAAACAGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS CAA 72 bp | CTTATCCCTGTTTCCTGCTGTCCAGGGAAAGAGGCCTaGTTGGCACCAGGCAAGGACTCCTTGAGGATAGAC | + |
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Preference number: 6 (lower is better) Translates to: LIPVSCCPGKEA*LAPGKDSLRID Trigger: GTCTATCCTCAAGGAGTCCTTGCCTGGTGCCAACAAGGCCTCTTTCCCTGGACAGCAGGAAACAGGGATAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS CAA 90 bp | AAGGACTCCTTGAGGATAGACACTTGGCCTGTTCCTCCATCTGTCTaGCTGGAGGGCCCTTGTTCCCTGGCTTGGCCTTTCTTCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KDSLRIDTWPVPPSV*LEGPCSLAWPFFSS Trigger: AGAAGAGAAGAAAGGCCAAGCCAGGGAACAAGGGCCCTCCAGCAAGACAGATGGAGGAACAGGCCAAGTGTCTATCCTCAAGGAGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043550.11 ENSMUST00000161367.2 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS GCA 72 bp | GGTTTGCTGACTGGCATCATTCTTTATTGTTGGCAATaGCTCTTCTGCCTTTGTCTGAGTGCCCCGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GLLTGIILYCWQ*LFCLCLSAPVL Trigger: CAGCACCGGGGCACTCAGACAAAGGCAGAAGAGGCATTGCCAACAATAAAGAATGATGCCAGTCAGCAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS CAA 90 bp | CAGCAACTCCACATTTGGTTTGCTGACTGGCATCATTCTTTATTGTaGGCAATGCCTCTTCTGCCTTTGTCTGAGTGCCCCGGTGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: QQLHIWFADWHHSLL*AMPLLPLSECPGAV Trigger: GACAGCACCGGGGCACTCAGACAAAGGCAGAAGAGGCATTGCCAACAATAAAGAATGATGCCAGTCAGCAAACCAAATGTGGAGTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
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| CDS CAA 90 bp | GGACAGCAACTCCACATTTGGTTTGCTGACTGGCATCATTCTTTATaGTTGGCAATGCCTCTTCTGCCTTTGTCTGAGTGCCCCGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GQQLHIWFADWHHSL*LAMPLLPLSECPGA Trigger: AGCACCGGGGCACTCAGACAAAGGCAGAAGAGGCATTGCCAACAATAAAGAATGATGCCAGTCAGCAAACCAAATGTGGAGTTGCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
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| CDS CAA 72 bp | CATCATTCTTTATTGTTGGCAATGCCTCTTCTGCCTTaGTCTGAGTGCCCCGGTGCTGTCTGTGTGGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HHSLLLAMPLLP*SECPGAVCVAS Trigger: AGAAGCCACACAGACAGCACCGGGGCACTCAGACAAAGGCAGAAGAGGCATTGCCAACAATAAAGAATGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 ENSMUST00000194278.6 |
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| CDS CAA 72 bp | CACATTTGGTTTGCTGACTGGCATCATTCTTTATTGTaGGCAATGCCTCTTCTGCCTTTGTCTGAGTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: HIWFADWHHSLL*AMPLLPLSECP Trigger: GGGGCACTCAGACAAAGGCAGAAGAGGCATTGCCAACAATAAAGAATGATGCCAGTCAGCAAACCAAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
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| CDS CAA 72 bp | CTCCACATTTGGTTTGCTGACTGGCATCATTCTTTATaGTTGGCAATGCCTCTTCTGCCTTTGTCTGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LHIWFADWHHSL*LAMPLLPLSEC Trigger: GCACTCAGACAAAGGCAGAAGAGGCATTGCCAACAATAAAGAATGATGCCAGTCAGCAAACCAAATGTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043550.11 ENSMUST00000192020.6 |
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