Pregenerated sensors for TRAF3IP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019842Ensembl transcript IDs: ENSMUST00000019987.7
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGGTCATAGATGTTTGTTTCTGTCACCTGCAGCATCCAGGCACTaGAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACA | + |
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Preference number: 1 (lower is better) Translates to: CGHRCLFLSPAASRH*SSGSPARTTQTQET Trigger: TGTCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCCTGGATGCTGCAGGTGACAGAAACAAACATCTATGACCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| 3UTR-3UTR GCA 90 bp | CATCCAGGCACTGAAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGAGTTCCAGGGCCTGGGTaGCACCAGCCAGCTCCGCTA | + |
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Preference number: 2 (lower is better) Translates to: HPGTEALEAQRGQLRLRRVPGPG*HQPAPL Trigger: TAGCGGAGCTGGCTGGTGGCACCCAGGCCCTGGAAC...TCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCCTGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| 3UTR-3UTR CCA 90 bp | CATAAATGGCCAGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGAAGGTGTTCCAGGGCCTaGGTGCCACCAGCCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: HKWPDLFLFVKGWGLNPGRCSRA*VPPASS Trigger: GGAGCTGGCTGGTGGCACCCAGGCCCTGGAACACCT...TCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCTGGCCATTTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCGAGGACAACTCAGACTCAGGAGACAGAGGACTCTGTAGAAGAGGTGTTGCTAGAAGAATGCTGTaGGAACAGGCTGGCACTGAG | + |
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Preference number: 2 (lower is better) Translates to: PSEDNSDSGDRGLCRRGVARRML*EQAGTE Trigger: CTCAGTGCCAGCCTGTTCTCACAGCATTCTTCTAGC...AACACCTCTTCTACAGAGTCCTCTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| 3UTR-3UTR CCA 90 bp | AGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGACTCCTACATGCCAGGCACTGAAGCTCTaGAAGCCCAGCGAGGACAAC | + |
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Preference number: 2 (lower is better) Translates to: RPFSLREGMGVESWTPTCQALKL*KPSEDN Trigger: GTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCCTG...GCATGTAGGAGTCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| 3UTR-3UTR TCA 90 bp | AGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGACTCCTACATGCAGGACACAGAGCATCTaGCCGACTCATAAAAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: RPFSLREGMGVESWTPTCRTQSI*PTHKSS Trigger: GCTACTTTTATGAGTCGGTCAGATGCTCTGTGTCCT...GCATGTAGGAGTCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| 3UTR-3UTR GCA 90 bp | AGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGACTCCTACATGCTTTGTTTCTGTCACCTaGAGCATCCAGGCACTGAAG | + |
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Preference number: 2 (lower is better) Translates to: RPFSLREGMGVESWTPTCFVSVT*SIQALK Trigger: CTTCAGTGCCTGGATGCTGCAGGTGACAGAAACAAA...GCATGTAGGAGTCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| 3UTR-3UTR GCA 90 bp | ACTCCCCACCCAATTACTCTGTTTACAATTAGGATTGCTTCATTAAAAGCCTCAGCTCCGCTAGAAGAATaGTGTGAGAACAGGCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: TPHPITLFTIRIASLKASAPLEE*CENRLA Trigger: TGCCAGCCTGTTCTCACAGCATTCTTCTAGCGGAGC...TGAGGCTTTTAATGAAGCAATCCTAATTGTAAACAGAGTAATTGGGTGGGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| 3UTR GCA 72 bp | GGGCCTGGGTGCCACCAGCCAGCTCCGCTAGAAGAATaGTGTGAGAACAGGCTGGCACTGAGCTGGAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: GPGCHQPAPLEE*CENRLALSWSG Trigger: GCCACTCCAGCTCAGTGCCAGCCTGTTCTCACAGCATTCTTCTAGCGGAGCTGGCTGGTGGCACCCAGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| 3UTR GCA 72 bp | AGAGGACTCTGTAGAAGAGGTGTTCCAGGGCCTGGGTaGCACCAGCCAGCTCCGCTAGAAGAATGCTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: RGLCRRGVPGPG*HQPAPLEECCE Trigger: CTCACAGCATTCTTCTAGCGGAGCTGGCTGGTGGCACCCAGGCCCTGGAACACCTCTTCTACAGAGTCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| 3UTR CCA 72 bp | GTTTCTGTCACCTGCAGCATCCAGGCACTGAAGCTCTaGAAGCCCAGCGAGGACAACTCAGACTCAGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: VSVTCSIQALKL*KPSEDNSDSGD Trigger: GTCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCCTGGATGCTGCAGGTGACAGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| 3UTR-3UTR CAA 90 bp | AGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGACTCCTACATGCTGTGGTCATAGATGTTaGTTTCTGTCACCTGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: RPFSLREGMGVESWTPTCCGHRC*FLSPAA Trigger: TGCTGCAGGTGACAGAAACAAACATCTATGACCACA...GCATGTAGGAGTCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| 3UTR CCA 72 bp | CAAAATGACTTGCTTAGTCAGAGGTACACTCAGGAGTaGGACAGAGATAGAAAACTAGACCATAACTCTGGT | + |
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Preference number: 3 (lower is better) Translates to: QNDLLSQRYTQE*DRDRKLDHNSG Trigger: ACCAGAGTTATGGTCTAGTTTTCTATCTCTGTCCCACTCCTGAGTGTACCTCTGACTAAGCAAGTCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| 3UTR TCA 72 bp | ACAGAGAACTTTGTCACATTTATCTACTACTATATCTaGGCAGTTTTGTTGATATCCCAGAGCTGCCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: TENFVTFIYYYI*AVLLISQSCPF Trigger: AAAAGGGCAGCTCTGGGATATCAACAAAACTGCTCAGATATAGTAGTAGATAAATGTGACAAAGTTCTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | CCAGGCACTGAAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACAGGCCTGTGGGGAAGGATaGGGCGGCAGCAGCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: PGTEALEAQRGQLRLRRQACGEG*GGSSWA Trigger: CGCCCAGCTGCTGCCGCCCCATCCTTCCCCACAGGC...CTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | GGCACTGAAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACAGAGGCTTCTGCACAGGGCGTaGGCCTCTTGCCCTTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GTEALEAQRGQLRLRRQRLLHRA*ASCPCP Trigger: GGGGCAAGGGCAAGAGGCCCACGCCCTGTGCAGAAG...CCTCTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR TCA 90 bp | CCAGGCACTGAAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACAGCACAAGGGTACCACCTaGAGGGTGGGCAGAGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PGTEALEAQRGQLRLRRQHKGTT*RVGRGP Trigger: AGGCCCTCTGCCCACCCTTCAGGTGGTACCCTTGTG...CTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | CAGGAGACAGAGGACTCTGTAGAAGAGGTGTTCCAGGGCCTGGGTGCCACCAGCAGCCAGTGTCTATCGTaGGCACATCTGGGGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: QETEDSVEEVFQGLGATSSQCLS*AHLGLP Trigger: GGGCAGCCCCAGATGTGCCCACGATAGACACTGGCT...GCTGGTGGCACCCAGGCCCTGGAACACCTCTTCTACAGAGTCCTCTGTCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | CAGGAGACAGAGGACTCTGTAGAAGAGGTGTTCCAGGGCCTGGGTGCCACCAGCTGGGGCGGCAGCAGCTaGGCGTTCATTGGATACCTC | + |
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Preference number: 4 (lower is better) Translates to: QETEDSVEEVFQGLGATSWGGSS*AFIGYL Trigger: GAGGTATCCAATGAACGCCCAGCTGCTGCCGCCCCA...GCTGGTGGCACCCAGGCCCTGGAACACCTCTTCTACAGAGTCCTCTGTCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | CATCCAGGCACTGAAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGAGTTCCATGGGGCCTGTaGGGAAGGATGGGGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: HPGTEALEAQRGQLRLRRVPWGL*GRMGRQ Trigger: CTGCCGCCCCATCCTTCCCCACAGGCCCCATGGAAC...TCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCCTGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | GGCACTGAAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACAGAGGCTGGTAGGCTGCTGCTaGAGGGTAGCCATGGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: GTEALEAQRGQLRLRRQRLVGCC*RVAMAV Trigger: CACGGCCATGGCTACCCTCCAGCAGCAGCCTACCAG...CCTCTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | ACAGAGGACTCTGTAGAAGAGGTGTTCCAGGGCCTGGGTGCCACCAGCCAGCTCCAGACTCAGGCTCGCTaGCTCCAGAGGAACATGAGG | + |
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Preference number: 4 (lower is better) Translates to: TEDSVEEVFQGLGATSQLQTQAR*LQRNMR Trigger: CCTCATGTTCCTCTGGAGCCAGCGAGCCTGAGTCTG...GAGCTGGCTGGTGGCACCCAGGCCCTGGAACACCTCTTCTACAGAGTCCTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR TCA 90 bp | GGCACTGAAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACAGAGGGCAGGTGACCTGTTGTaGCACAGGCTGGTGGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: GTEALEAQRGQLRLRRQRAGDLL*HRLVVC Trigger: GCAAACCACCAGCCTGTGTCACAACAGGTCACCTGC...CCTCTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR TCA 90 bp | CCAGGCACTGAAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACAGTGGAGTCATTCAGGATaGCCTTCTGCACAGGGCGTG | + |
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Preference number: 4 (lower is better) Translates to: PGTEALEAQRGQLRLRRQWSHSG*PSAQGV Trigger: CACGCCCTGTGCAGAAGGTCATCCTGAATGACTCCA...CTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR TCA 90 bp | CATCCAGGCACTGAAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACATACTCTTCCTCCCTaGGCAGCCGCAGCAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: HPGTEALEAQRGQLRLRRHTLPP*AAAAGC Trigger: ACATCCTGCTGCGGCTGCTCAGGGAGGAAGAGTATG...TCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCCTGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR GCA 90 bp | GGCACTGAAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACAGAGGTACTTGCTGGTAGGCTaGTGCTGGAGGGTAGCCATG | + |
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Preference number: 4 (lower is better) Translates to: GTEALEAQRGQLRLRRQRYLLVG*CWRVAM Trigger: CATGGCTACCCTCCAGCAGCAGCCTACCAGCAAGTA...CCTCTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR GCA 90 bp | ACAGAGGACTCTGTAGAAGAGGTGTTCCAGGGCCTGGGTGCCACCAGCCAGCTCATGTGGTCTCAGCTCTaGAGGAAGGTCCAAGGACTC | + |
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Preference number: 4 (lower is better) Translates to: TEDSVEEVFQGLGATSQLMWSQL*RKVQGL Trigger: GAGTCCTTGGACCTTCCTGCAGAGCTGAGACCACAT...GAGCTGGCTGGTGGCACCCAGGCCCTGGAACACCTCTTCTACAGAGTCCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR GCA 90 bp | AGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACAGAGGACTCTGTATCGTCCTCGTCCAGCTaGGACTCAGCGCCTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: SSGSPARTTQTQETEDSVSSSSS*DSAPST Trigger: TGTGGAAGGCGCTGAGTCGCAGCTGGACGAGGACGA...TACAGAGTCCTCTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR GCA 90 bp | TTCCACCACCGAGCTACACTCCCCACCCAATTACTCTGTTTACAATTAGGATTGGGGCACATCTGGGGCTaGCCTGTGCCTGTGGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: FHHRATLPTQLLCLQLGLGHIWG*PVPVGP Trigger: GGGCCCCACAGGCACAGGGCAGCCCCAGATGTGCCC...CAATCCTAATTGTAAACAGAGTAATTGGGTGGGGAGTGTAGCTCGGTGGTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR GCA 90 bp | AGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGACTCCTACATGCTGGGCCTCTTGCCCTTaGCCCAGGAAGGACCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: RPFSLREGMGVESWTPTCWASCP*PRKDLP Trigger: GGGCAGGTCCTTCCTGGGGCAAGGGCAAGAGGCCCA...GCATGTAGGAGTCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | CCCAGCGAGGACAACTCAGACTCAGGAGACAGAGGACTCTGTAGAAGAGGTGTTTGTGAACCGATGCTCTaGAGGGAGGGCTCCGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: PSEDNSDSGDRGLCRRGVCEPML*REGSEL Trigger: GAGCTCGGAGCCCTCCCTCCAGAGCATCGGTTCACA...AACACCTCTTCTACAGAGTCCTCTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR GCA 90 bp | CAGGAGACAGAGGACTCTGTAGAAGAGGTGTTCCAGGGCCTGGGTGCCACCAGCAGAGAAGTCTCTCTGTaGAGGTCTCTCTTCTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: QETEDSVEEVFQGLGATSREVSL*RSLFLV Trigger: GACCAAGAAGAGAGACCTGCACAGAGAGACTTCTCT...GCTGGTGGCACCCAGGCCCTGGAACACCTCTTCTACAGAGTCCTCTGTCTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | TGGCCAGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGACTCCTATATCGTGGGCACATCTaGGGCTGCCCTGTGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: WPDLFLFVKGWGLNPGLLYRGHI*GCPVPV Trigger: CACAGGCACAGGGCAGCCCCAGATGTGCCCACGATA...TAGGAGTCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCTGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | GACAACTCAGACTCAGGAGACAGAGGACTCTGTAGAAGAGGTGTTCCAGGGCCTGGAGGTGAGGGGCAATaGCCTCTCCAACTGCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: DNSDSGDRGLCRRGVPGPGGEGQ*PLQLPD Trigger: ATCAGGCAGTTGGAGAGGCCATTGCCCCTCACCTCC...AGGCCCTGGAACACCTCTTCTACAGAGTCCTCTGTCTCCTGAGTCTGAGTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | TGGCCAGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGACTCCTAGAGGTGGCAATTCCCTaGACCTCAGAGGCCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: WPDLFLFVKGWGLNPGLLEVAIP*TSEAQG Trigger: TCCCTGGGCCTCTGAGGTCCAGGGAATTGCCACCTC...TAGGAGTCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCTGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR GCA 90 bp | TGGCCAGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGACTCCTACACAGGCTGGTGGTTTaGCAGTTTCAGGGGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: WPDLFLFVKGWGLNPGLLHRLVV*QFQGRA Trigger: TGCCCTCCCCTGAAACTGGCAAACCACCAGCCTGTG...TAGGAGTCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCTGGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | ATGGCCAGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGACTCCTTTCAGGGGAGGGCACTaGAGCACAGACAAGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: MARPFSLREGMGVESWTPFRGGH*STDKLL Trigger: CAGCAGCTTGTCTGTGCTCCAGTGCCCTCCCCTGAA...AGGAGTCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCTGGCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | CCCAGCGAGGACAACTCAGACTCAGGAGACAGAGGACTCTGTAGAAGAGGTGTTCGGGGCATCATCTCTTaGCCACCACTGAAGGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: PSEDNSDSGDRGLCRRGVRGIIS*PPLKES Trigger: AGACTCCTTCAGTGGTGGCCAAGAGATGATGCCCCG...AACACCTCTTCTACAGAGTCCTCTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | AGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACAGAGGACTCTGTACTCTCTTCTTGGTCTTaGGGGCTGGAGTCATTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSGSPARTTQTQETEDSVLSSWS*GLESFR Trigger: CCTGAATGACTCCAGCCCCCAAGACCAAGAAGAGAG...TACAGAGTCCTCTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | CCAGGCACTGAAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACAGCTTCTGGCAAATTGCTaGTTCTTAGAGTTCCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: PGTEALEAQRGQLRLRRQLLANC*FLEFLG Trigger: CCCGAGGAACTCTAAGAACCAGCAATTTGCCAGAAG...CTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | TGGCCAGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGACTCCTAGTACTGACAGTTCCATaGGGCCTGTGGGGAAGGATG | + |
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Preference number: 4 (lower is better) Translates to: WPDLFLFVKGWGLNPGLLVLTVP*GLWGRM Trigger: CATCCTTCCCCACAGGCCCCATGGAACTGTCAGTAC...TAGGAGTCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCTGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | ATGGCCAGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGACTCCTCACTCCATTAGATGGTaGGCGGTAGAGCTGGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: MARPFSLREGMGVESWTPHSIRW*AVELVP Trigger: AGGGACCAGCTCTACCGCCCACCATCTAATGGAGTG...AGGAGTCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCTGGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | AGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACAGAGGACTCTGTAGCACATGCTCCTTCTTaGCATTTGGGAAGAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: SSGSPARTTQTQETEDSVAHAPS*HLGRAQ Trigger: CTGTGCTCTTCCCAAATGCCAAGAAGGAGCATGTGC...TACAGAGTCCTCTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR TCA 90 bp | ATGGCCAGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGACTCCTACTCGGGAATGGTTCTaGTTCATCAACCTCCACGGG | + |
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Preference number: 4 (lower is better) Translates to: MARPFSLREGMGVESWTPTREWF*FINLHG Trigger: CCCGTGGAGGTTGATGAATCAGAACCATTCCCGAGT...AGGAGTCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCTGGCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR TCA 90 bp | CAGGAGACAGAGGACTCTGTAGAAGAGGTGTTCCAGGGCCTGGGTGCCACCAGCGTTTGTATTTGGGGCTaGTTGCTACGATTATCATCA | + |
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Preference number: 4 (lower is better) Translates to: QETEDSVEEVFQGLGATSVCIWG*LLRLSS Trigger: TGATGATAATCGTAGCAATCAGCCCCAAATACAAAC...GCTGGTGGCACCCAGGCCCTGGAACACCTCTTCTACAGAGTCCTCTGTCTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR GCA 90 bp | CCAGGCACTGAAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACAGATGAGGAAATATCTTTaGCAAGTTCAGGGTGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: PGTEALEAQRGQLRLRRQMRKYL*QVQGAF Trigger: GAAGGCACCCTGAACTTGGCAAAGATATTTCCTCAT...CTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR GCA 90 bp | TTCCACCACCGAGCTACACTCCCCACCCAATTACTCTGTTTACAATTAGGATTGTTGCTGGTAGGCTGCTaGTGGAGGGTAGCCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: FHHRATLPTQLLCLQLGLLLVGC*WRVAMA Trigger: GGCCATGGCTACCCTCCAGCAGCAGCCTACCAGCAA...CAATCCTAATTGTAAACAGAGTAATTGGGTGGGGAGTGTAGCTCGGTGGTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR GCA 90 bp | ACAGAGGACTCTGTAGAAGAGGTGTTCCAGGGCCTGGGTGCCACCAGCCAGCTCATTCTTCTGGCAAATTaGTGGTTCTTAGAGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TEDSVEEVFQGLGATSQLILLAN*WFLEFL Trigger: GAGGAACTCTAAGAACCAGCAATTTGCCAGAAGAAT...GAGCTGGCTGGTGGCACCCAGGCCCTGGAACACCTCTTCTACAGAGTCCTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR TCA 90 bp | GACAACTCAGACTCAGGAGACAGAGGACTCTGTAGAAGAGGTGTTCCAGGGCCTGGCTCCAGAGGAACATaGGGAAATATCTTTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DNSDSGDRGLCRRGVPGPGSRGT*GNIFAK Trigger: CTTGGCAAAGATATTTCCTCATGTTCCTCTGGAGCC...AGGCCCTGGAACACCTCTTCTACAGAGTCCTCTGTCTCCTGAGTCTGAGTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR TCA 90 bp | CATAAATGGCCAGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGAGTCAGGAGAAGCTGCTaGAAGCTGAGATCCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HKWPDLFLFVKGWGLNPGVRRSC*KLRSQP Trigger: TGGCTGGGATCTCAGCTTTCAGCAGCTTCTCCTGAC...TCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCTGGCCATTTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR GCA 90 bp | CATAAATGGCCAGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGAGGAGCACAGACAAGCTaGTGGGTGCCATGTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HKWPDLFLFVKGWGLNPGGAQTS*WVPCSL Trigger: CAAGGAACATGGCACCCAGCAGCTTGTCTGTGCTCC...TCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCTGGCCATTTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | AGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACAGAGGACTCTGTAGATTTGTCTGATTCATaGCCAGTGTCAGGAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGSPARTTQTQETEDSVDLSDS*PVSGEA Trigger: AGCTTCTCCTGACACTGGCCATGAATCAGACAAATC...TACAGAGTCCTCTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | AGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGACTCCTACATGCTGTATTGGGGGCAGGTaGTTCCAATTCCTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPFSLREGMGVESWTPTCCIGGR*FQFLFW Trigger: CCAGAAGAGGAATTGGAACCACCTGCCCCCAATACA...GCATGTAGGAGTCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | CACAGAGCATCTGACCGACTCATAAAAGTAGCTGAAGTGATGAGAGTTTTTGTGGCTAGGGATGGAGCCTaGGGACCATGTGGTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HRASDRLIKVAEVMRVFVARDGA*GPCGLS Trigger: GCTGAGACCACATGGTCCCCAGGCTCCATCCCTAGC...CACAAAAACTCTCATCACTTCAGCTACTTTTATGAGTCGGTCAGATGCTCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR TCA 90 bp | ATGGCCAGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGACTCCTTGCTTCCCTGACTTATaGACTCAATCTGCATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: MARPFSLREGMGVESWTPCFPDL*TQSASS Trigger: GGATGATGCAGATTGAGTTCATAAGTCAGGGAAGCA...AGGAGTCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCTGGCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR TCA 90 bp | CCCAGCGAGGACAACTCAGACTCAGGAGACAGAGGACTCTGTAGAAGAGGTGTTAAGTTCATGCTTCCCTaGCTTATGAACTCAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSEDNSDSGDRGLCRRGVKFMLP*LMNSIC Trigger: GCAGATTGAGTTCATAAGTCAGGGAAGCATGAACTT...AACACCTCTTCTACAGAGTCCTCTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | CATCCAGGCACTGAAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGATGTTTTTCTTATTCTTaGGCCAGCTGTAAACATGAG | + |
|
Preference number: 4 (lower is better) Translates to: HPGTEALEAQRGQLRLRRCFSYS*ASCKHE Trigger: CTCATGTTTACAGCTGGCCCAAGAATAAGAAAAACA...TCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCCTGGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR TCA 90 bp | AGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGACTCCTACATGCATCGGTTTCAGCAATTaGCTCGGGAATGGTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RPFSLREGMGVESWTPTCIGFSN*LGNGSD Trigger: ATCAGAACCATTCCCGAGTCAATTGCTGAAACCGAT...GCATGTAGGAGTCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR GCA 90 bp | AGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGACTCCTACATGCTTGCCAAGTTCAGGGTaGCTTCTAAAGAAACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPFSLREGMGVESWTPTCLPSSG*LLKKLA Trigger: AGCCAGTTTCTTTAGAAGGCACCCTGAACTTGGCAA...GCATGTAGGAGTCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR GCA 90 bp | CACAGAGCATCTGACCGACTCATAAAAGTAGCTGAAGTGATGAGAGTTTTTGTGTTCAGGATGACCTTCTaGACAGGGCGTGGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HRASDRLIKVAEVMRVFVFRMTF*TGRGPL Trigger: AAGAGGCCCACGCCCTGTGCAGAAGGTCATCCTGAA...CACAAAAACTCTCATCACTTCAGCTACTTTTATGAGTCGGTCAGATGCTCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | TTCCACCACCGAGCTACACTCCCCACCCAATTACTCTGTTTACAATTAGGATTGCCATGTTCCTTGTATTaGGGGCAGGTGGTTCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: FHHRATLPTQLLCLQLGLPCSLY*GQVVPI Trigger: AATTGGAACCACCTGCCCCCAATACAAGGAACATGG...CAATCCTAATTGTAAACAGAGTAATTGGGTGGGGAGTGTAGCTCGGTGGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | TTCCACCACCGAGCTACACTCCCCACCCAATTACTCTGTTTACAATTAGGATTGCTCCTTCTTGGCATTTaGGAAGAGCACAGGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: FHHRATLPTQLLCLQLGLLLLGI*EEHRDE Trigger: TTCATCCCTGTGCTCTTCCCAAATGCCAAGAAGGAG...CAATCCTAATTGTAAACAGAGTAATTGGGTGGGGAGTGTAGCTCGGTGGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR TCA 90 bp | ATGGCCAGACCTTTTTCTCTTCGTGAAGGGATGGGGGTTGAATCCTGGACTCCTATCTGCATCATCCGATaGATGTACTTAGTATGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: MARPFSLREGMGVESWTPICIIR*MYLVCK Trigger: CTTACATACTAAGTACATTCATCGGATGATGCAGAT...AGGAGTCCAGGATTCAACCCCCATCCCTTCACGAAGAGAAAAAGGTCTGGCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR GCA 90 bp | CACAGAGCATCTGACCGACTCATAAAAGTAGCTGAAGTGATGAGAGTTTTTGTGTTAGTATGTAAGCCATaGTCGTCCTCGTCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HRASDRLIKVAEVMRVFVLVCKP*SSSSSC Trigger: GCAGCTGGACGAGGACGAGCATGGCTTACATACTAA...CACAAAAACTCTCATCACTTCAGCTACTTTTATGAGTCGGTCAGATGCTCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR GCA 90 bp | ACTCCCCACCCAATTACTCTGTTTACAATTAGGATTGCTTCATTAAAAGCCTCAAATGGCCTCTCCAACTaGCTGATGCCCAGGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: TPHPITLFTIRIASLKASNGLSN*LMPRTS Trigger: AGATGTCCTGGGCATCAGGCAGTTGGAGAGGCCATT...TGAGGCTTTTAATGAAGCAATCCTAATTGTAAACAGAGTAATTGGGTGGGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR GCA 90 bp | TTCCACCACCGAGCTACACTCCCCACCCAATTACTCTGTTTACAATTAGGATTGGTATTTGGGGCTGATTaGTACGATTATCATCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FHHRATLPTQLLCLQLGLVFGAD*YDYHHC Trigger: ACAGTGATGATAATCGTAGCAATCAGCCCCAAATAC...CAATCCTAATTGTAAACAGAGTAATTGGGTGGGGAGTGTAGCTCGGTGGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CCA 90 bp | ACTCCCCACCCAATTACTCTGTTTACAATTAGGATTGCTTCATTAAAAGCCTCATTCTGGAGAGTATTCTaGGATCGGTTTCAGCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: TPHPITLFTIRIASLKASFWRVF*DRFQQL Trigger: CAATTGCTGAAACCGATCCCAGAATACTCTCCAGAA...TGAGGCTTTTAATGAAGCAATCCTAATTGTAAACAGAGTAATTGGGTGGGGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 90 bp | CTGCCCAGGCAGAGCAGGCTGGAGTACTTGCTGGTAGGCTGCTGCTaGAGGGTAGCCATGGCCGTGTGGCACCTGGTGGTGGTAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPRQSRLEYLLVGCC*RVAMAVWHLVVVGP Trigger: GGGCCCTACCACCACCAGGTGCCACACGGCCATGGCTACCCTCCAGCAGCAGCCTACCAGCAAGTACTCCAGCCTGCTCTGCCTGGGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS GCA 90 bp | GACCTGCCCAGGCAGAGCAGGCTGGAGTACTTGCTGGTAGGCTGCTaGTGGAGGGTAGCCATGGCCGTGTGGCACCTGGTGGTGGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: DLPRQSRLEYLLVGC*WRVAMAVWHLVVVG Trigger: CCCTACCACCACCAGGTGCCACACGGCCATGGCTACCCTCCAGCAGCAGCCTACCAGCAAGTACTCCAGCCTGCTCTGCCTGGGCAGGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS GCA 90 bp | GCTGGAGTCATTCAGGATGACCTTCTGCACAGGGCGTGGGCCTCTTaGCCTTGCCCCAGGAAGGACCTGCCCAGGCAGAGCAGGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AGVIQDDLLHRAWAS*PCPRKDLPRQSRLE Trigger: CTCCAGCCTGCTCTGCCTGGGCAGGTCCTTCCTGGGGCAAGGGCAAGAGGCCCACGCCCTGTGCAGAAGGTCATCCTGAATGACTCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 90 bp | GTCTTGGGGGCTGGAGTCATTCAGGATGACCTTCTGCACAGGGCGTaGGCCTCTTGCCCTTGCCCCAGGAAGGACCTGCCCAGGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLGAGVIQDDLLHRA*ASCPCPRKDLPRQS Trigger: GCTCTGCCTGGGCAGGTCCTTCCTGGGGCAAGGGCAAGAGGCCCACGCCCTGTGCAGAAGGTCATCCTGAATGACTCCAGCCCCCAAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CAA 90 bp | CAGGAGACAGAGGACTCTGTAGAAGAGGTGTTCCAGGGCCTGGGTGCCACCAGCCAGGGCGTGGGCCTCTaGCCCTTGCCCCAGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QETEDSVEEVFQGLGATSQGVGL*PLPQEG Trigger: TCCTTCCTGGGGCAAGGGCAAGAGGCCCACGCCCTG...GCTGGTGGCACCCAGGCCCTGGAACACCTCTTCTACAGAGTCCTCTGTCTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS GCA 90 bp | AAGGACCTGCCCAGGCAGAGCAGGCTGGAGTACTTGCTGGTAGGCTaGTGCTGGAGGGTAGCCATGGCCGTGTGGCACCTGGTGGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KDLPRQSRLEYLLVG*CWRVAMAVWHLVVV Trigger: TACCACCACCAGGTGCCACACGGCCATGGCTACCCTCCAGCAGCAGCCTACCAGCAAGTACTCCAGCCTGCTCTGCCTGGGCAGGTCCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 90 bp | AGGCCCAGGGAGGTCCTGCAGGTAACACGAGGAGGTGAGGGGCAATaGCCTCTCCAACTGCCTGATGCCCAGGACATCTTGGGGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPREVLQVTRGGEGQ*PLQLPDAQDILGLG Trigger: TCCCAGCCCCAAGATGTCCTGGGCATCAGGCAGTTGGAGAGGCCATTGCCCCTCACCTCCTCGTGTTACCTGCAGGACCTCCCTGGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 90 bp | GAGTACTTGCTGGTAGGCTGCTGCTGGAGGGTAGCCATGGCCGTGTaGCACCTGGTGGTGGTAGGGCCCTCCGGGGCAGTAGTACTGACA | + |
|
Preference number: 5 (lower is better) Translates to: EYLLVGCCWRVAMAV*HLVVVGPSGAVVLT Trigger: TGTCAGTACTACTGCCCCGGAGGGCCCTACCACCACCAGGTGCCACACGGCCATGGCTACCCTCCAGCAGCAGCCTACCAGCAAGTACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS GCA 90 bp | CTCTCTTCTTGGTCTTGGGGGCTGGAGTCATTCAGGATGACCTTCTaGACAGGGCGTGGGCCTCTTGCCCTTGCCCCAGGAAGGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSWSWGLESFRMTF*TGRGPLALAPGRTC Trigger: GCAGGTCCTTCCTGGGGCAAGGGCAAGAGGCCCACGCCCTGTGCAGAAGGTCATCCTGAATGACTCCAGCCCCCAAGACCAAGAAGAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CAA 90 bp | CAGGAGACAGAGGACTCTGTAGAAGAGGTGTTCCAGGGCCTGGGTGCCACCAGCCCGGGGCATCATCTCTaGGCCACCACTGAAGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QETEDSVEEVFQGLGATSPGHHL*ATTEGV Trigger: GACTCCTTCAGTGGTGGCCAAGAGATGATGCCCCGG...GCTGGTGGCACCCAGGCCCTGGAACACCTCTTCTACAGAGTCCTCTGTCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS TCA 90 bp | GGCGGCAGCAGCTGGGCGTTCATTGGATACCTCTCAAGTTCAAACTaGGGTGGCAATTCCCTGGACCTCAGAGGCCCAGGGAGGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGSSWAFIGYLSSSN*GGNSLDLRGPGRSC Trigger: GCAGGACCTCCCTGGGCCTCTGAGGTCCAGGGAATTGCCACCTCAGTTTGAACTTGAGAGGTATCCAATGAACGCCCAGCTGCTGCCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS TCA 90 bp | GTGCAGGTCTCTCTTCTTGGTCTTGGGGGCTGGAGTCATTCAGGATaGCCTTCTGCACAGGGCGTGGGCCTCTTGCCCTTGCCCCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VQVSLLGLGGWSHSG*PSAQGVGLLPLPQE Trigger: TTCCTGGGGCAAGGGCAAGAGGCCCACGCCCTGTGCAGAAGGTCATCCTGAATGACTCCAGCCCCCAAGACCAAGAAGAGAGACCTGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 90 bp | AGGACTTTAGCTCGCAGGCAGGTGACCTGTTGTGACACAGGCTGGTaGTTTGCCAGTTTCAGGGGAGGGCACTGGAGCACAGACAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RTLARRQVTCCDTGW*FASFRGGHWSTDKL Trigger: CAGCTTGTCTGTGCTCCAGTGCCCTCCCCTGAAACTGGCAAACCACCAGCCTGTGTCACAACAGGTCACCTGCCTGCGAGCTAAAGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 90 bp | TCCAGGACTTTAGCTCGCAGGCAGGTGACCTGTTGTGACACAGGCTaGTGGTTTGCCAGTTTCAGGGGAGGGCACTGGAGCACAGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRTLARRQVTCCDTG*WFASFRGGHWSTDK Trigger: CTTGTCTGTGCTCCAGTGCCCTCCCCTGAAACTGGCAAACCACCAGCCTGTGTCACAACAGGTCACCTGCCTGCGAGCTAAAGTCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CAA 90 bp | ACAGAGGACTCTGTAGAAGAGGTGTTCCAGGGCCTGGGTGCCACCAGCCAGCTCGCCATGTTCCTTGTATaGGGGGCAGGTGGTTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: TEDSVEEVFQGLGATSQLAMFLV*GAGGSN Trigger: ATTGGAACCACCTGCCCCCAATACAAGGAACATGGC...GAGCTGGCTGGTGGCACCCAGGCCCTGGAACACCTCTTCTACAGAGTCCTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CAA 90 bp | CATCCAGGCACTGAAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGAGATGCCCAGGACATCTaGGGGCTGGGAATCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HPGTEALEAQRGQLRLRRDAQDI*GLGIIA Trigger: GGCTATGATTCCCAGCCCCAAGATGTCCTGGGCATC...TCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCCTGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS GCA 90 bp | GTAGAGCTGGTCCCTCGGGAGCCTCGGGAAAGAGAAGTCTCTCTGTaGAGGTCTCTCTTCTTGGTCTTGGGGGCTGGAGTCATTCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VELVPREPREREVSL*RSLFLVLGAGVIQD Trigger: ATCCTGAATGACTCCAGCCCCCAAGACCAAGAAGAGAGACCTGCACAGAGAGACTTCTCTTTCCCGAGGCTCCCGAGGGACCAGCTCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 90 bp | GGTTTGCCAGTTTCAGGGGAGGGCACTGGAGCACAGACAAGCTGCTaGGTGCCATGTTCCTTGTATTGGGGGCAGGTGGTTCCAATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLPVSGEGTGAQTSC*VPCSLYWGQVVPIP Trigger: AGGAATTGGAACCACCTGCCCCCAATACAAGGAACATGGCACCCAGCAGCTTGTCTGTGCTCCAGTGCCCTCCCCTGAAACTGGCAAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 90 bp | TGTTGTGACACAGGCTGGTGGTTTGCCAGTTTCAGGGGAGGGCACTaGAGCACAGACAAGCTGCTGGGTGCCATGTTCCTTGTATTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CCDTGWWFASFRGGH*STDKLLGAMFLVLG Trigger: CCCCAATACAAGGAACATGGCACCCAGCAGCTTGTCTGTGCTCCAGTGCCCTCCCCTGAAACTGGCAAACCACCAGCCTGTGTCACAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 90 bp | CTCGGGAAAGAGAAGTCTCTCTGTGCAGGTCTCTCTTCTTGGTCTTaGGGGCTGGAGTCATTCAGGATGACCTTCTGCACAGGGCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGKEKSLCAGLSSWS*GLESFRMTFCTGRG Trigger: CCCACGCCCTGTGCAGAAGGTCATCCTGAATGACTCCAGCCCCCAAGACCAAGAAGAGAGACCTGCACAGAGAGACTTCTCTTTCCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 90 bp | GGGAGCCTCGGGAAAGAGAAGTCTCTCTGTGCAGGTCTCTCTTCTTaGTCTTGGGGGCTGGAGTCATTCAGGATGACCTTCTGCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSLGKEKSLCAGLSS*SWGLESFRMTFCTG Trigger: CCCTGTGCAGAAGGTCATCCTGAATGACTCCAGCCCCCAAGACCAAGAAGAGAGACCTGCACAGAGAGACTTCTCTTTCCCGAGGCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CAA 90 bp | GACAACTCAGACTCAGGAGACAGAGGACTCTGTAGAAGAGGTGTTCCAGGGCCTAGCAGGCTGGAGTACTaGCTGGTAGGCTGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DNSDSGDRGLCRRGVPGPSRLEY*LVGCCW Trigger: CCAGCAGCAGCCTACCAGCAAGTACTCCAGCCTGCT...AGGCCCTGGAACACCTCTTCTACAGAGTCCTCTGTCTCCTGAGTCTGAGTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 90 bp | CGTTCATTGGATACCTCTCAAGTTCAAACTGAGGTGGCAATTCCCTaGACCTCAGAGGCCCAGGGAGGTCCTGCAGGTAACACGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSLDTSQVQTEVAIP*TSEAQGGPAGNTRR Trigger: CCTCCTCGTGTTACCTGCAGGACCTCCCTGGGCCTCTGAGGTCCAGGGAATTGCCACCTCAGTTTGAACTTGAGAGGTATCCAATGAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CAA 90 bp | CCCAGCGAGGACAACTCAGACTCAGGAGACAGAGGACTCTGTAGAAGAGGTGTTTGCAGGTCTCTCTTCTaGGTCTTGGGGGCTGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PSEDNSDSGDRGLCRRGVCRSLF*VLGAGV Trigger: GACTCCAGCCCCCAAGACCAAGAAGAGAGACCTGCA...AACACCTCTTCTACAGAGTCCTCTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CAA 90 bp | CATCCAGGCACTGAAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGAGGCACATGCTCCTTCTaGGCATTTGGGAAGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: HPGTEALEAQRGQLRLRRGTCSF*AFGKST Trigger: TGTGCTCTTCCCAAATGCCAAGAAGGAGCATGTGCC...TCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCCTGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 90 bp | GGCACTGGAGCACAGACAAGCTGCTGGGTGCCATGTTCCTTGTATTaGGGGCAGGTGGTTCCAATTCCTCTTCTGGAGAGTATTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GTGAQTSCWVPCSLY*GQVVPIPLLESILG Trigger: TCCCAGAATACTCTCCAGAAGAGGAATTGGAACCACCTGCCCCCAATACAAGGAACATGGCACCCAGCAGCTTGTCTGTGCTCCAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CAA 90 bp | TTCCACCACCGAGCTACACTCCCCACCCAATTACTCTGTTTACAATTAGGATTGCCTCGGGCTAAGGGGTaGCTAGGGGGTCTAGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: FHHRATLPTQLLCLQLGLPRAKG*LGGLGT Trigger: CGTGCCTAGACCCCCTAGCAACCCCTTAGCCCGAGG...CAATCCTAATTGTAAACAGAGTAATTGGGTGGGGAGTGTAGCTCGGTGGTGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CAA 90 bp | GGCACTGAAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACAGAGGCCTTCCACATCCTGTTaGTATTTGGGGCTGATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GTEALEAQRGQLRLRRQRPSTSC*YLGLIA Trigger: AGCAATCAGCCCCAAATACAAACAGGATGTGGAAGG...CCTCTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CAA 90 bp | AGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACAGAGGACTCTGTAGCAGCTGGGCGTTCATaGGATACCTCTCAAGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SSGSPARTTQTQETEDSVAAGRS*DTSQVQ Trigger: TTGAACTTGAGAGGTATCCAATGAACGCCCAGCTGC...TACAGAGTCCTCTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CAA 90 bp | CCCAGCGAGGACAACTCAGACTCAGGAGACAGAGGACTCTGTAGAAGAGGTGTTTCTCTCTTCTTGGTCTaGGGGGCTGGAGTCATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSEDNSDSGDRGLCRRGVSLFLV*GAGVIQ Trigger: CTGAATGACTCCAGCCCCCAAGACCAAGAAGAGAGA...AACACCTCTTCTACAGAGTCCTCTGTCTCCTGAGTCTGAGTTGTCCTCGCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CAA 90 bp | ACAGAGGACTCTGTAGAAGAGGTGTTCCAGGGCCTGGGTGCCACCAGCCAGCTCACATCCTGTTTGTATTaGGGGCTGATTGCTACGATT | + |
|
Preference number: 5 (lower is better) Translates to: TEDSVEEVFQGLGATSQLTSCLY*GLIATI Trigger: AATCGTAGCAATCAGCCCCAAATACAAACAGGATGT...GAGCTGGCTGGTGGCACCCAGGCCCTGGAACACCTCTTCTACAGAGTCCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 90 bp | CACAGACAAGCTGCTGGGTGCCATGTTCCTTGTATTGGGGGCAGGTaGTTCCAATTCCTCTTCTGGAGAGTATTCTGGGATCGGTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRQAAGCHVPCIGGR*FQFLFWRVFWDRFQ Trigger: CTGAAACCGATCCCAGAATACTCTCCAGAAGAGGAATTGGAACCACCTGCCCCCAATACAAGGAACATGGCACCCAGCAGCTTGTCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS-3UTR CAA 90 bp | CATCCAGGCACTGAAGCTCTGGAAGCCCAGCGAGGACAACTCAGACTCAGGAGACATGAGGAAATATCTTaGCCAAGTTCAGGGTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HPGTEALEAQRGQLRLRRHEEIS*PSSGCL Trigger: AAGGCACCCTGAACTTGGCAAAGATATTTCCTCATG...TCTCCTGAGTCTGAGTTGTCCTCGCTGGGCTTCCAGAGCTTCAGTGCCTGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 90 bp | TGCCATGTTCCTTGTATTGGGGGCAGGTGGTTCCAATTCCTCTTCTaGAGAGTATTCTGGGATCGGTTTCAGCAATTGACTCGGGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: CHVPCIGGRWFQFLF*RVFWDRFQQLTREW Trigger: CCATTCCCGAGTCAATTGCTGAAACCGATCCCAGAATACTCTCCAGAAGAGGAATTGGAACCACCTGCCCCCAATACAAGGAACATGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS TCA 90 bp | CCAGCTGCGACTCAGCGCCTTCCACATCCTGTTTGTATTTGGGGCTaGTTGCTACGATTATCATCACTGTCTTATCTCGAAGATAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAATQRLPHPVCIWG*LLRLSSLSYLEDSA Trigger: AGCGCTATCTTCGAGATAAGACAGTGATGATAATCGTAGCAATCAGCCCCAAATACAAACAGGATGTGGAAGGCGCTGAGTCGCAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS TCA 90 bp | GATTTGTCTGATTCATGGCCAGTGTCAGGAGAAGCTGCTGAAAGCTaGGATCCCAGCCATCTATTGCGTTTTTCCGTAAGTGTGAACCGA | + |
|
Preference number: 5 (lower is better) Translates to: DLSDSWPVSGEAAES*DPSHLLRFSVSVNR Trigger: TCGGTTCACACTTACGGAAAAACGCAATAGATGGCTGGGATCTCAGCTTTCAGCAGCTTCTCCTGACACTGGCCATGAATCAGACAAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS GCA 90 bp | CTGCGACTCAGCGCCTTCCACATCCTGTTTGTATTTGGGGCTGATTaGTACGATTATCATCACTGTCTTATCTCGAAGATAGCGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LRLSAFHILFVFGAD*YDYHHCLISKIALH Trigger: ATGGAGCGCTATCTTCGAGATAAGACAGTGATGATAATCGTAGCAATCAGCCCCAAATACAAACAGGATGTGGAAGGCGCTGAGTCGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS TCA 90 bp | TCCAATTCCTCTTCTGGAGAGTATTCTGGGATCGGTTTCAGCAATTaGCTCGGGAATGGTTCTGATTCATCAACCTCCACGGGAATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SNSSSGEYSGIGFSN*LGNGSDSSTSTGML Trigger: AAGCATTCCCGTGGAGGTTGATGAATCAGAACCATTCCCGAGTCAATTGCTGAAACCGATCCCAGAATACTCTCCAGAAGAGGAATTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CAA 90 bp | CCTTGCCCCAGGAAGGACCTGCCCAGGCAGAGCAGGCTGGAGTACTaGCTGGTAGGCTGCTGCTGGAGGGTAGCCATGGCCGTGTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PCPRKDLPRQSRLEY*LVGCCWRVAMAVWH Trigger: GTGCCACACGGCCATGGCTACCCTCCAGCAGCAGCCTACCAGCAAGTACTCCAGCCTGCTCTGCCTGGGCAGGTCCTTCCTGGGGCAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS GCA 72 bp | CCCAGGCAGAGCAGGCTGGAGTACTTGCTGGTAGGCTaGTGCTGGAGGGTAGCCATGGCCGTGTGGCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: PRQSRLEYLLVG*CWRVAMAVWHL Trigger: CAGGTGCCACACGGCCATGGCTACCCTCCAGCAGCAGCCTACCAGCAAGTACTCCAGCCTGCTCTGCCTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS GCA 72 bp | AGGCAGAGCAGGCTGGAGTACTTGCTGGTAGGCTGCTaGTGGAGGGTAGCCATGGCCGTGTGGCACCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RQSRLEYLLVGC*WRVAMAVWHLV Trigger: CACCAGGTGCCACACGGCCATGGCTACCCTCCAGCAGCAGCCTACCAGCAAGTACTCCAGCCTGCTCTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS GCA 72 bp | ATTCAGGATGACCTTCTGCACAGGGCGTGGGCCTCTTaGCCTTGCCCCAGGAAGGACCTGCCCAGGCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: IQDDLLHRAWAS*PCPRKDLPRQS Trigger: GCTCTGCCTGGGCAGGTCCTTCCTGGGGCAAGGGCAAGAGGCCCACGCCCTGTGCAGAAGGTCATCCTGAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 72 bp | CAGAGCAGGCTGGAGTACTTGCTGGTAGGCTGCTGCTaGAGGGTAGCCATGGCCGTGTGGCACCTGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QSRLEYLLVGCC*RVAMAVWHLVV Trigger: CACCACCAGGTGCCACACGGCCATGGCTACCCTCCAGCAGCAGCCTACCAGCAAGTACTCCAGCCTGCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 72 bp | GCTGGAGTCATTCAGGATGACCTTCTGCACAGGGCGTaGGCCTCTTGCCCTTGCCCCAGGAAGGACCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AGVIQDDLLHRA*ASCPCPRKDLP Trigger: GGGCAGGTCCTTCCTGGGGCAAGGGCAAGAGGCCCACGCCCTGTGCAGAAGGTCATCCTGAATGACTCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 72 bp | GTCCAAGGACTCCTCAGGGGCTTCCACTCCATTAGATaGTGGGCGGTAGAGCTGGTCCCTCGGGAGCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: VQGLLRGFHSIR*WAVELVPREPR Trigger: CCGAGGCTCCCGAGGGACCAGCTCTACCGCCCACCATCTAATGGAGTGGAAGCCCCTGAGGAGTCCTTGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CAA 72 bp | AGGAAGGACCTGCCCAGGCAGAGCAGGCTGGAGTACTaGCTGGTAGGCTGCTGCTGGAGGGTAGCCATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RKDLPRQSRLEY*LVGCCWRVAMA Trigger: GGCCATGGCTACCCTCCAGCAGCAGCCTACCAGCAAGTACTCCAGCCTGCTCTGCCTGGGCAGGTCCTTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS GCA 72 bp | TGGTCTTGGGGGCTGGAGTCATTCAGGATGACCTTCTaGACAGGGCGTGGGCCTCTTGCCCTTGCCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WSWGLESFRMTF*TGRGPLALAPG Trigger: TCCTGGGGCAAGGGCAAGAGGCCCACGCCCTGTGCAGAAGGTCATCCTGAATGACTCCAGCCCCCAAGACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 72 bp | CAAGGACTCCTCAGGGGCTTCCACTCCATTAGATGGTaGGCGGTAGAGCTGGTCCCTCGGGAGCCTCGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QGLLRGFHSIRW*AVELVPREPRE Trigger: TTCCCGAGGCTCCCGAGGGACCAGCTCTACCGCCCACCATCTAATGGAGTGGAAGCCCCTGAGGAGTCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 72 bp | GCTCGCAGGCAGGTGACCTGTTGTGACACAGGCTGGTaGTTTGCCAGTTTCAGGGGAGGGCACTGGAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: ARRQVTCCDTGW*FASFRGGHWST Trigger: TGTGCTCCAGTGCCCTCCCCTGAAACTGGCAAACCACCAGCCTGTGTCACAACAGGTCACCTGCCTGCGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS GCA 72 bp | CAGGGGAGGGCACTGGAGCACAGACAAGCTGCTGGGTaGCATGTTCCTTGTATTGGGGGCAGGTGGTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: QGRALEHRQAAG*HVPCIGGRWFQ Trigger: TTGGAACCACCTGCCCCCAATACAAGGAACATGGCACCCAGCAGCTTGTCTGTGCTCCAGTGCCCTCCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 72 bp | TTAGCTCGCAGGCAGGTGACCTGTTGTGACACAGGCTaGTGGTTTGCCAGTTTCAGGGGAGGGCACTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LARRQVTCCDTG*WFASFRGGHWS Trigger: GCTCCAGTGCCCTCCCCTGAAACTGGCAAACCACCAGCCTGTGTCACAACAGGTCACCTGCCTGCGAGCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CAA 90 bp | GGTGAGGGGCAATGGCCTCTCCAACTGCCTGATGCCCAGGACATCTaGGGGCTGGGAATCATAGCCAGTGTCTATCGTGGGCACATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GEGQWPLQLPDAQDI*GLGIIASVYRGHIW Trigger: CCAGATGTGCCCACGATAGACACTGGCTATGATTCCCAGCCCCAAGATGTCCTGGGCATCAGGCAGTTGGAGAGGCCATTGCCCCTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 72 bp | GTTTCAGGGGAGGGCACTGGAGCACAGACAAGCTGCTaGGTGCCATGTTCCTTGTATTGGGGGCAGGTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VSGEGTGAQTSC*VPCSLYWGQVV Trigger: AACCACCTGCCCCCAATACAAGGAACATGGCACCCAGCAGCTTGTCTGTGCTCCAGTGCCCTCCCCTGAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 72 bp | CTGGAGGGAGGGCTCCGAGCTCAGACTCAGGCTCGCTaGCTCCAGAGGAACATGAGGAAATATCTTTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LEGGLRAQTQAR*LQRNMRKYLCQ Trigger: TTGGCAAAGATATTTCCTCATGTTCCTCTGGAGCCAGCGAGCCTGAGTCTGAGCTCGGAGCCCTCCCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CAA 72 bp | CAATGGCCTCTCCAACTGCCTGATGCCCAGGACATCTaGGGGCTGGGAATCATAGCCAGTGTCTATCGTGGG | + |
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Preference number: 6 (lower is better) Translates to: QWPLQLPDAQDI*GLGIIASVYRG Trigger: CCCACGATAGACACTGGCTATGATTCCCAGCCCCAAGATGTCCTGGGCATCAGGCAGTTGGAGAGGCCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CAA 90 bp | GGGCACTGGAGCACAGACAAGCTGCTGGGTGCCATGTTCCTTGTATaGGGGGCAGGTGGTTCCAATTCCTCTTCTGGAGAGTATTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GHWSTDKLLGAMFLV*GAGGSNSSSGEYSG Trigger: CCCAGAATACTCTCCAGAAGAGGAATTGGAACCACCTGCCCCCAATACAAGGAACATGGCACCCAGCAGCTTGTCTGTGCTCCAGTGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS TCA 72 bp | AGCTGGGCGTTCATTGGATACCTCTCAAGTTCAAACTaGGGTGGCAATTCCCTGGACCTCAGAGGCCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SWAFIGYLSSSN*GGNSLDLRGPG Trigger: CCCTGGGCCTCTGAGGTCCAGGGAATTGCCACCTCAGTTTGAACTTGAGAGGTATCCAATGAACGCCCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS GCA 72 bp | AGCCATCTATTGCGTTTTTCCGTAAGTGTGAACCGATaGTCTGGAGGGAGGGCTCCGAGCTCAGACTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SHLLRFSVSVNR*SGGRAPSSDSG Trigger: GCCTGAGTCTGAGCTCGGAGCCCTCCCTCCAGAGCATCGGTTCACACTTACGGAAAAACGCAATAGATGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 72 bp | GATACCTCTCAAGTTCAAACTGAGGTGGCAATTCCCTaGACCTCAGAGGCCCAGGGAGGTCCTGCAGGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: DTSQVQTEVAIP*TSEAQGGPAGN Trigger: GTTACCTGCAGGACCTCCCTGGGCCTCTGAGGTCCAGGGAATTGCCACCTCAGTTTGAACTTGAGAGGTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 72 bp | GGCGTTCATTGGATACCTCTCAAGTTCAAACTGAGGTaGCAATTCCCTGGACCTCAGAGGCCCAGGGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GVHWIPLKFKLR*QFPGPQRPREV Trigger: GACCTCCCTGGGCCTCTGAGGTCCAGGGAATTGCCACCTCAGTTTGAACTTGAGAGGTATCCAATGAACGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CAA 72 bp | AAATTGCTGGTTCTTAGAGTTCCTCGGGCTAAGGGGTaGCTAGGGGGTCTAGGCACGGCAGCTAGGGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: KLLVLRVPRAKG*LGGLGTAARDG Trigger: TCCATCCCTAGCTGCCGTGCCTAGACCCCCTAGCAACCCCTTAGCCCGAGGAACTCTAAGAACCAGCAATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CAA 72 bp | AGCACAGACAAGCTGCTGGGTGCCATGTTCCTTGTATaGGGGGCAGGTGGTTCCAATTCCTCTTCTGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: STDKLLGAMFLV*GAGGSNSSSGE Trigger: CTCTCCAGAAGAGGAATTGGAACCACCTGCCCCCAATACAAGGAACATGGCACCCAGCAGCTTGTCTGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CAA 90 bp | TCAGACTCAGGCTCGCTGGCTCCAGAGGAACATGAGGAAATATCTTaGCCAAGTTCAGGGTGCCTTCTAAAGAAACTGGCTTCACCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SDSGSLAPEEHEEIS*PSSGCLLKKLASPS Trigger: GGAAGGTGAAGCCAGTTTCTTTAGAAGGCACCCTGAACTTGGCAAAGATATTTCCTCATGTTCCTCTGGAGCCAGCGAGCCTGAGTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CAA 90 bp | TGCTCGTCCTCGTCCAGCTGCGACTCAGCGCCTTCCACATCCTGTTaGTATTTGGGGCTGATTGCTACGATTATCATCACTGTCTTATCT | + |
|
Preference number: 6 (lower is better) Translates to: CSSSSSCDSAPSTSC*YLGLIATIIITVLS Trigger: AGATAAGACAGTGATGATAATCGTAGCAATCAGCCCCAAATACAAACAGGATGTGGAAGGCGCTGAGTCGCAGCTGGACGAGGACGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS GCA 72 bp | TACTTAGTATGTAAGCCATGCTCGTCCTCGTCCAGCTaGGACTCAGCGCCTTCCACATCCTGTTTGTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: YLVCKPCSSSSS*DSAPSTSCLYL Trigger: CAAATACAAACAGGATGTGGAAGGCGCTGAGTCGCAGCTGGACGAGGACGAGCATGGCTTACATACTAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 72 bp | GGCAGGTGGTTCCAATTCCTCTTCTGGAGAGTATTCTaGGATCGGTTTCAGCAATTGACTCGGGAATGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GRWFQFLFWRVF*DRFQQLTREWF Trigger: GAACCATTCCCGAGTCAATTGCTGAAACCGATCCCAGAATACTCTCCAGAAGAGGAATTGGAACCACCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CAA 72 bp | GGCTCGCTGGCTCCAGAGGAACATGAGGAAATATCTTaGCCAAGTTCAGGGTGCCTTCTAAAGAAACTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSLAPEEHEEIS*PSSGCLLKKLA Trigger: AGCCAGTTTCTTTAGAAGGCACCCTGAACTTGGCAAAGATATTTCCTCATGTTCCTCTGGAGCCAGCGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CAA 72 bp | TCGTCCAGCTGCGACTCAGCGCCTTCCACATCCTGTTaGTATTTGGGGCTGATTGCTACGATTATCATCACT | + |
|
Preference number: 6 (lower is better) Translates to: SSSCDSAPSTSC*YLGLIATIIIT Trigger: AGTGATGATAATCGTAGCAATCAGCCCCAAATACAAACAGGATGTGGAAGGCGCTGAGTCGCAGCTGGACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CAA 90 bp | TCCTCGTCCAGCTGCGACTCAGCGCCTTCCACATCCTGTTTGTATTaGGGGCTGATTGCTACGATTATCATCACTGTCTTATCTCGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSCDSAPSTSCLY*GLIATIIITVLSRR Trigger: TCTTCGAGATAAGACAGTGATGATAATCGTAGCAATCAGCCCCAAATACAAACAGGATGTGGAAGGCGCTGAGTCGCAGCTGGACGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS TCA 72 bp | TGGGATCGGTTTCAGCAATTGACTCGGGAATGGTTCTaGTTCATCAACCTCCACGGGAATGCTTCGGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: WDRFQQLTREWF*FINLHGNASVH Trigger: ATGAACCGAAGCATTCCCGTGGAGGTTGATGAATCAGAACCATTCCCGAGTCAATTGCTGAAACCGATCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS TCA 72 bp | GATTCATGGCCAGTGTCAGGAGAAGCTGCTGAAAGCTaGGATCCCAGCCATCTATTGCGTTTTTCCGTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: DSWPVSGEAAES*DPSHLLRFSVS Trigger: ACTTACGGAAAAACGCAATAGATGGCTGGGATCTCAGCTTTCAGCAGCTTCTCCTGACACTGGCCATGAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS TCA 72 bp | TCTTCTGGAGAGTATTCTGGGATCGGTTTCAGCAATTaGCTCGGGAATGGTTCTGATTCATCAACCTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: SSGEYSGIGFSN*LGNGSDSSTST Trigger: CGTGGAGGTTGATGAATCAGAACCATTCCCGAGTCAATTGCTGAAACCGATCCCAGAATACTCTCCAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS GCA 72 bp | GAGGAACATGAGGAAATATCTTTGCCAAGTTCAGGGTaGCTTCTAAAGAAACTGGCTTCACCTTCCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: EEHEEISLPSSG*LLKKLASPSSR Trigger: CCTGGAGGAAGGTGAAGCCAGTTTCTTTAGAAGGCACCCTGAACTTGGCAAAGATATTTCCTCATGTTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CAA 72 bp | AGCTGCGACTCAGCGCCTTCCACATCCTGTTTGTATTaGGGGCTGATTGCTACGATTATCATCACTGTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SCDSAPSTSCLY*GLIATIIITVL Trigger: TAAGACAGTGATGATAATCGTAGCAATCAGCCCCAAATACAAACAGGATGTGGAAGGCGCTGAGTCGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS TCA 72 bp | ACTCAGCGCCTTCCACATCCTGTTTGTATTTGGGGCTaGTTGCTACGATTATCATCACTGTCTTATCTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: TQRLPHPVCIWG*LLRLSSLSYLE Trigger: TTCGAGATAAGACAGTGATGATAATCGTAGCAATCAGCCCCAAATACAAACAGGATGTGGAAGGCGCTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS GCA 72 bp | AGCGCCTTCCACATCCTGTTTGTATTTGGGGCTGATTaGTACGATTATCATCACTGTCTTATCTCGAAGATA | + |
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Preference number: 6 (lower is better) Translates to: SAFHILFVFGAD*YDYHHCLISKI Trigger: TATCTTCGAGATAAGACAGTGATGATAATCGTAGCAATCAGCCCCAAATACAAACAGGATGTGGAAGGCGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CCA 72 bp | CCCCGGATTCTATCCTCAAATATGTCAATCGCAGTTTaGAAGCCGTTCACCAACAGAAAGTTCACAAATTTC | + |
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Preference number: 6 (lower is better) Translates to: PRILSSNMSIAV*KPFTNRKFTNF Trigger: GAAATTTGTGAACTTTCTGTTGGTGAACGGCTTCCAAACTGCGATTGACATATTTGAGGATAGAATCCGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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| CDS CAA 72 bp | ACCCCGGATTCTATCCTCAAATATGTCAATCGCAGTTaGGAAGCCGTTCACCAACAGAAAGTTCACAAATTT | + |
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Preference number: 6 (lower is better) Translates to: TPDSILKYVNRS*EAVHQQKVHKF Trigger: AAATTTGTGAACTTTCTGTTGGTGAACGGCTTCCAAACTGCGATTGACATATTTGAGGATAGAATCCGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019987.7 |
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