Pregenerated sensors for TRAF3IP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034292Ensembl transcript IDs: ENSMUST00000047242.9, ENSMUST00000189341.7
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGGCTGAAGGGCTTCTCACACTGTCCAGGCCCCCAGGCGAGAGCTaGGCTCTGCCTTCACTGACTGAGAAACCCTGGCTGTGCCTCGTG | + |
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Preference number: 1 (lower is better) Translates to: GAEGLLTLSRPPGES*ALPSLTEKPWLCLV Trigger: CACGAGGCACAGCCAGGGTTTCTCAGTCAGTGAAGGCAGAGCCCAGCTCTCGCCTGGGGGCCTGGACAGTGTGAGAAGCCCTTCAGCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| 3UTR TCA 90 bp | TGGCAGGGTGGTGCGGTGTGCTTCAGACAGGAAAGACTAAGGGGCTaGAGGGCTTCTCACACTGTCCAGGCCCCCAGGCGAGAGCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: WQGGAVCFRQERLRG*RASHTVQAPRRELG Trigger: GCCCAGCTCTCGCCTGGGGGCCTGGACAGTGTGAGAAGCCCTTCAGCCCCTTAGTCTTTCCTGTCTGAAGCACACCGCACCACCCTGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| 3UTR CCA 90 bp | GGGCCATGTCAGCCCTTCATGCGACAATGTCCTCTTAAAGAGGCCTaGGGGACTGCTTATCCATCCGGAGTAAGCCGGTGGCCAAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: GPCQPFMRQCPLKEA*GTAYPSGVSRWPRQ Trigger: CTGCCTTGGCCACCGGCTTACTCCGGATGGATAAGCAGTCCCCCAGGCCTCTTTAAGAGGACATTGTCGCATGAAGGGCTGACATGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| 3UTR GCA 90 bp | CTTCCCTCCCCTAACCTATCTGGAAGCATCTGTTTGGCAGGGTGGTaGGGTGTGCTTCAGACAGGAAAGACTAAGGGGCTGAAGGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: LPSPNLSGSICLAGW*GVLQTGKTKGLKGF Trigger: GAAGCCCTTCAGCCCCTTAGTCTTTCCTGTCTGAAGCACACCGCACCACCCTGCCAAACAGATGCTTCCAGATAGGTTAGGGGAGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| 3UTR CCA 90 bp | GCCGGTGGCCAAGGCAGGTTCCCATCACACAATGCCCATAAAGGCTaGGCTAAATTCTCCTTCTCAACCTATGAGCTTTCAGGGCTAGAA | + |
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Preference number: 1 (lower is better) Translates to: AGGQGRFPSHNAHKG*AKFSFSTYELSGLE Trigger: TTCTAGCCCTGAAAGCTCATAGGTTGAGAAGGAGAATTTAGCCCAGCCTTTATGGGCATTGTGTGATGGGAACCTGCCTTGGCCACCGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| 3UTR TCA 90 bp | GAGACTCAAAAGCAGAACTCTGGGCCTGCTGTTTACCTAGTAGGATaGGACAACTTACCTCCAGAACACCAGGGTACAGAGTCAGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: ETQKQNSGPAVYLVG*DNLPPEHQGTESAR Trigger: CCTGGCTGACTCTGTACCCTGGTGTTCTGGAGGTAAGTTGTCTCATCCTACTAGGTAAACAGCAGGCCCAGAGTTCTGCTTTTGAGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| 3UTR CCA 90 bp | CACATCCCAGGGTGTGATGCAGTGCACAAAAGAAATACCCAGAAATaGAAGACTACTTCAGACCTTACGCCAGTAAGAACATCTCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: HIPGCDAVHKRNTQK*KTTSDLTPVRTSPD Trigger: GTCTGGAGATGTTCTTACTGGCGTAAGGTCTGAAGTAGTCTTCCATTTCTGGGTATTTCTTTTGTGCACTGCATCACACCCTGGGATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| 3UTR-3UTR TCA 90 bp | ACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGCCCCTTGTCCGTCATaGGGAAGATGGCTCCATCTC | + |
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Preference number: 2 (lower is better) Translates to: TLAGSGHSRPFLSRLGLRAPCPS*GRWLHL Trigger: GAGATGGAGCCATCTTCCTCATGACGGACAAGGGGC...TCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| 3UTR-3UTR CCA 90 bp | GTGCCTCGTGTGCTAAGGCAGTCTTCACACATCCCAGGGTGTGATGCAGTGCACCATTTCTCAGCAGACTaGGGCTCAGAGGGGCGGTTC | + |
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Preference number: 2 (lower is better) Translates to: VPRVLRQSSHIPGCDAVHHFSAD*GSEGRF Trigger: GAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATG...GTGCACTGCATCACACCCTGGGATGTGTGAAGACTGCCTTAGCACACGAGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| 3UTR-3UTR GCA 90 bp | ATCCCAGGGTGTGATGCAGTGCACAAAAGAAATACCCAGAAATGGAAGACTACTGGGTCATGGGGAGGCTaGAGAAAGAAGCCTATACAA | + |
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Preference number: 2 (lower is better) Translates to: IPGCDAVHKRNTQKWKTTGSWGG*RKKPIQ Trigger: TTGTATAGGCTTCTTTCTGCAGCCTCCCCATGACCC...AGTAGTCTTCCATTTCTGGGTATTTCTTTTGTGCACTGCATCACACCCTGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| 3UTR CCA 72 bp | GGGCTTCTCACACTGTCCAGGCCCCCAGGCGAGAGCTaGGCTCTGCCTTCACTGACTGAGAAACCCTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: GLLTLSRPPGES*ALPSLTEKPWL Trigger: CAGCCAGGGTTTCTCAGTCAGTGAAGGCAGAGCCCAGCTCTCGCCTGGGGGCCTGGACAGTGTGAGAAGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| 3UTR TCA 72 bp | GGGCTCAGAGGGGCGGTTCCTGCCCCTTGTCCGTCATaGGGAAGATGGCTCCATCTCTGCAGGACTGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: GLRGAVPAPCPS*GRWLHLCRTGH Trigger: ATGGCCAGTCCTGCAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCCCCTCTGAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| 3UTR-3UTR CAA 90 bp | GACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGGGCGGTTCCTGCCCCTaGTCCGTCATGAGGAAGATG | + |
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Preference number: 3 (lower is better) Translates to: DLSWLRAQQAISQQTGAQGGSCP*SVMRKM Trigger: CATCTTCCTCATGACGGACAAGGGGCAGGAACCGCC...CTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| 3UTR GCA 72 bp | ATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTaGCCCTTGTCCGTCATGAGGAAGATGGCTCCATCT | + |
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Preference number: 3 (lower is better) Translates to: ISQQTGAQRGGS*PLSVMRKMAPS Trigger: AGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| 3UTR GCA 72 bp | CCTAACCTATCTGGAAGCATCTGTTTGGCAGGGTGGTaGGGTGTGCTTCAGACAGGAAAGACTAAGGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: PNLSGSICLAGW*GVLQTGKTKGL Trigger: CAGCCCCTTAGTCTTTCCTGTCTGAAGCACACCGCACCACCCTGCCAAACAGATGCTTCCAGATAGGTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| 3UTR TCA 72 bp | AAGCAGAACTCTGGGCCTGCTGTTTACCTAGTAGGATaGGACAACTTACCTCCAGAACACCAGGGTACAGAG | + |
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Preference number: 3 (lower is better) Translates to: KQNSGPAVYLVG*DNLPPEHQGTE Trigger: CTCTGTACCCTGGTGTTCTGGAGGTAAGTTGTCTCATCCTACTAGGTAAACAGCAGGCCCAGAGTTCTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| 3UTR TCA 72 bp | TCGTGTGCTAAGGCAGTCTTCACACATCCCAGGGTGTaGTGCAGTGCACAAAAGAAATACCCAGAAATGGAA | + |
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Preference number: 3 (lower is better) Translates to: SCAKAVFTHPRV*CSAQKKYPEME Trigger: TTCCATTTCTGGGTATTTCTTTTGTGCACTGCATCACACCCTGGGATGTGTGAAGACTGCCTTAGCACACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| 3UTR CCA 72 bp | CAAGGCAGGTTCCCATCACACAATGCCCATAAAGGCTaGGCTAAATTCTCCTTCTCAACCTATGAGCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: QGRFPSHNAHKG*AKFSFSTYELS Trigger: TGAAAGCTCATAGGTTGAGAAGGAGAATTTAGCCCAGCCTTTATGGGCATTGTGTGATGGGAACCTGCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| CDS-3UTR GCA 90 bp | GCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCGCCTCCGGATCACCTTaGCCAGAGCCTCCTGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: AQGTAGHFSADWGSEGRFASGSP*PEPPAS Trigger: GGACGCAGGAGGCTCTGGGCAAGGTGATCCGGAGGC...GAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR GCA 90 bp | CTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTTTGACCCTGGGAGGTaGTGGCCGTGCACTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LRAQQAISQQTGAQRGGSFDPGR*WPCTPR Trigger: CCTGGGAGTGCACGGCCAGCACCTCCCAGGGTCAAA...GGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR CCA 90 bp | TCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGCAGGACTGGCCAGACCCTGGGAGGTGCTaGCCGTGCACTCCCAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SCPLSVMRKMAPSLQDWPDPGRC*PCTPRP Trigger: CGGCCTGGGAGTGCACGGCCAGCACCTCCCAGGGTC...TGGCCAGTCCTGCAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR GCA 90 bp | GGGCGGTTCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGCAGGAGGGAGGTGCTGGCCGTaGACTCCCAGGCCGAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: GRFLPLVRHEEDGSISAGGRCWP*TPRPRY Trigger: ATACCTCGGCCTGGGAGTGCACGGCCAGCACCTCCC...TCCTGCAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR GCA 90 bp | GGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTGCCAGCTGCAGCTCATTCTaGATGGCGTCCACGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GHSRPFLSRLGLRGAVPASCSSF*MASTSS Trigger: GGAGGACGTGGACGCCATGCAGAATGAGCTGCAGCT...GGCAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR CCA 90 bp | GCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTGATACTCTGCTCCTaGCTCAGGGCTTCGGCATGC | + |
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Preference number: 4 (lower is better) Translates to: AGSGHSRPFLSRLGLRGAVILCS*LRASAC Trigger: GCATGCCGAAGCCCTGAGCCAGGAGCAGAGTATCAC...CGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR TCA 90 bp | CTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCGCCGAGGTATTCTTCTaGGGCTGGAGGGAAGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LRAQQAISQQTGAQRGGSAEVFF*GWREAH Trigger: GTGAGCTTCCCTCCAGCCTCAGAAGAATACCTCGGC...GGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR TCA 90 bp | CAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTGGCCGAGGTATTCTTCTaGGGCTGGAGGGAAGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: QGTAGHFSADWGSEGRFLAEVFF*GWREAH Trigger: GTGAGCTTCCCTCCAGCCTCAGAAGAATACCTCGGC...CAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR GCA 90 bp | CAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTGAGGGCTTCGGCATGCTaGCTGTTCTCACTGTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: QGTAGHFSADWGSEGRFLRASAC*LFSLCH Trigger: GTGGCACAGTGAGAACAGGCAGCATGCCGAAGCCCT...CAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR GCA 90 bp | GGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCTCAGGGCTTCGGCATaGTGCCTGTTCTCACTGTGC | + |
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Preference number: 4 (lower is better) Translates to: GSGHSRPFLSRLGLRGAVLRASA*CLFSLC Trigger: GCACAGTGAGAACAGGCAGCATGCCGAAGCCCTGAG...AACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR GCA 90 bp | CTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCCTCAGGGCTTCGGCATaGTGCCTGTTCTCACTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LRAQQAISQQTGAQRGGSLRASA*CLFSLC Trigger: GCACAGTGAGAACAGGCAGCATGCCGAAGCCCTGAG...GGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR CCA 90 bp | AGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTGCTTCTGTCCCTGTCCTTaGCCCGTGCTCGGGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: RAQQAISQQTGAQRGGSCFCPCP*PVLGLS Trigger: AGAAAGCCCGAGCACGGGCCAAGGACAGGGACAGAA...GCAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR CCA 90 bp | CAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTGGCAGCTCATTCTGCATaGCGTCCACGTCCTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: QGTAGHFSADWGSEGRFLAAHSA*RPRPPG Trigger: TCCAGGAGGACGTGGACGCCATGCAGAATGAGCTGC...CAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR TCA 90 bp | CAGAGGGGCGGTTCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGTGCTCTCTTGTCGTTTaGCCCTGGGAGGTGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: QRGGSCPLSVMRKMAPSLCSLVV*PWEVLA Trigger: GGCCAGCACCTCCCAGGGTCAAACGACAAGAGAGCA...CAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCCCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR TCA 90 bp | GCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCAATGTCTGCGATTTCTaGCAGCTGAGGGGCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: AQGTAGHFSADWGSEGRFNVCDF*QLRGSL Trigger: GAGGCTGCCCCTCAGCTGTCAGAAATCGCAGACATT...GAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR GCA 90 bp | ACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGATTTGACCCTGGGAGGTaGTGGCCGTGCACTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TLAGSGHSRPFLSRLGLRFDPGR*WPCTPR Trigger: CCTGGGAGTGCACGGCCAGCACCTCCCAGGGTCAAA...TCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR CCA 90 bp | AGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTGCACCTCCGGCTTATCTTaGCCAGCAGGTCCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RAQQAISQQTGAQRGGSCTSGLS*PAGPAS Trigger: AGAAGCTGGACCTGCTGGCCAAGATAAGCCGGAGGT...GCAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR TCA 90 bp | GCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCTGCCAAGGGTTCACCTaGCACCATCATGACCACATC | + |
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Preference number: 4 (lower is better) Translates to: AQGTAGHFSADWGSEGRFCQGFT*HHHDHI Trigger: GATGTGGTCATGATGGTGTCAGGTGAACCCTTGGCA...GAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR TCA 90 bp | TCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGCAGGACTGGCCAGCGATTTCTGACAGCTaGGGGGCAGCCTCCACCACA | + |
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Preference number: 4 (lower is better) Translates to: SCPLSVMRKMAPSLQDWPAISDS*GAASTT Trigger: TGTGGTGGAGGCTGCCCCTCAGCTGTCAGAAATCGC...TGGCCAGTCCTGCAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR TCA 90 bp | GGCGGTTCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGCAGGACATCCTCCAGCTCCCCTaGCGGCACCATGTCAATGTC | + |
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Preference number: 4 (lower is better) Translates to: GGSCPLSVMRKMAPSLQDILQLP*RHHVNV Trigger: GACATTGACATGGTGCCGTCAGGGGAGCTGGAGGAT...GTCCTGCAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR TCA 90 bp | CAGAGGGGCGGTTCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGCCACCGCACTGTCTGTaGTACTCTGCTCCTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: QRGGSCPLSVMRKMAPSLPPHCL*YSAPGS Trigger: TGAGCCAGGAGCAGAGTATCACAGACAGTGCGGTGG...CAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCCCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR GCA 90 bp | GAGAAGGGCCATGTCAGCCCTTCATGCGACAATGTCCTCTTAAAGAGGCCTGGGGCCTCCGGATCACCTTaGCCAGAGCCTCCTGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: EKGHVSPSCDNVLLKRPGASGSP*PEPPAS Trigger: GGACGCAGGAGGCTCTGGGCAAGGTGATCCGGAGGC...CCCAGGCCTCTTTAAGAGGACATTGTCGCATGAAGGGCTGACATGGCCCTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| CDS-3UTR GCA 90 bp | AGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTGCCGTCGAGGACCTAGATaGTCCCACAGAAATGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: RAQQAISQQTGAQRGGSCRRGPR*SHRNVS Trigger: GCTGACATTTCTGTGGGAGCATCTAGGTCCTCGACG...GCAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR GCA 90 bp | GCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGCACAGATCTTGTCCTaGTGGTCTCTGATCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: AGSGHSRPFLSRLGLRGAAQILS*WSLICC Trigger: GCAACAGATCAGAGACCAGCAGGACAAGATCTGTGC...CGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR CCA 90 bp | CAGAGGGGCGGTTCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGGTGATACTCTGCTCCTaGCTCAGGGCTTCGGCATGC | + |
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Preference number: 4 (lower is better) Translates to: QRGGSCPLSVMRKMAPSLVILCS*LRASAC Trigger: GCATGCCGAAGCCCTGAGCCAGGAGCAGAGTATCAC...CAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCCCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR TCA 90 bp | CAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTGCCTTCTCACCAGGCTTaGGAGACTGCTGCAATTTCT | + |
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Preference number: 4 (lower is better) Translates to: QGTAGHFSADWGSEGRFLPSHQA*ETAAIS Trigger: AGAAATTGCAGCAGTCTCTCAAGCCTGGTGAGAAGG...CAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR GCA 90 bp | GGGCTGAAGGGCTTCTCACACTGTCCAGGCCCCCAGGCGAGAGCTGGGCTCTGCTCACCTTCCAGTGAATaGTTCGATCGCCGTTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: GLKGFSHCPGPQARAGLCSPSSE*FDRRFD Trigger: ATCAAAACGGCGATCGAAGCATTCACTGGAAGGTGA...GCAGAGCCCAGCTCTCGCCTGGGGGCCTGGACAGTGTGAGAAGCCCTTCAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| CDS-3UTR GCA 90 bp | AGCACACCTTCACCAAAGAGAAGGGCCATGTCAGCCCTTCATGCGACAATGTCCGGGAGGTGCTGGCCGTaGACTCCCAGGCCGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: STPSPKRRAMSALHATMSGRCWP*TPRPRY Trigger: ATACCTCGGCCTGGGAGTGCACGGCCAGCACCTCCC...GGACATTGTCGCATGAAGGGCTGACATGGCCCTTCTCTTTGGTGAAGGTGTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR GCA 90 bp | GACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGGGGGAGTCACCTTTCTaGTTTACTGCTGGCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DLSWLRAQQAISQQTGAQGESPF*FTAGSG Trigger: GCCAGAGCCAGCAGTAAAGCAGAAAGGTGACTCCCC...CTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189341.7 |
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| CDS-3UTR CCA 90 bp | CTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCGGCCACAATTCTAGCTaGTTTTGCTGCCAAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRAQQAISQQTGAQRGGSGHNSS*FCCQGF Trigger: GAACCCTTGGCAGCAAAACCAGCTAGAATTGTGGCC...GGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR CCA 90 bp | GGGCTGAAGGGCTTCTCACACTGTCCAGGCCCCCAGGCGAGAGCTGGGCTCTGCTCATTGTCAGAGTTCTaGGAGTCGATGATCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: GLKGFSHCPGPQARAGLCSLSEF*ESMITL Trigger: CAGTGTGATCATCGACTCCCAGAACTCTGACAATGA...GCAGAGCCCAGCTCTCGCCTGGGGGCCTGGACAGTGTGAGAAGCCCTTCAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CCA 90 bp | TCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGCAGGACTGGCCAGCAGCTCATTCTGCATaGCGTCCACGTCCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SCPLSVMRKMAPSLQDWPAAHSA*RPRPPG Trigger: TCCAGGAGGACGTGGACGCCATGCAGAATGAGCTGC...TGGCCAGTCCTGCAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CCA 90 bp | CTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCCAGATCTTGTCCTGCTaGTCTCTGATCTGTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRAQQAISQQTGAQRGGSQILSC*SLICCS Trigger: GGAGCAACAGATCAGAGACCAGCAGGACAAGATCTG...GGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR GCA 90 bp | CTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCGCTTGTCTGCATCTCTaGTTTTCTCCCTGTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRAQQAISQQTGAQRGGSACLHL*FSPCQD Trigger: ATCCTGACAGGGAGAAAAGCAGAGATGCAGACAAGC...GGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR GCA 90 bp | GGGCGGTTCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGCAGGATGCCTGTTCTCACTGTaGCACAGCTGCAGCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: GRFLPLVRHEEDGSISAGCLFSL*HSCSSF Trigger: GAATGAGCTGCAGCTGTGGCACAGTGAGAACAGGCA...TCCTGCAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CCA 90 bp | CTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCCCTCTTTGTGTATTCTaGACTCTTCCTCCTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRAQQAISQQTGAQRGGSPLCVF*TLPPSH Trigger: GTGGGAAGGAGGAAGAGTCCAGAATACACAAAGAGG...GGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CCA 90 bp | GACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGTACACAGGGTCTGGATaGACACGCGGAGCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: DLSWLRAQQAISQQTGAQYTGSG*TRGASL Trigger: TAGAGAAGCTCCGCGTGTCCATCCAGACCCTGTGTA...CTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR TCA 90 bp | CCTAAACCGAAAGATCTGACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCGCGATTTCTGACAGCTaGGGGGCAGCCTCCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: PKPKDLTLAGSGHSRPFLAISDS*GAASTT Trigger: TGTGGTGGAGGCTGCCCCTCAGCTGTCAGAAATCGC...GAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGTCAGATCTTTCGGTTTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR GCA 90 bp | TCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGCAGGACTGGCCATTTGTGCTCTGCACTTaGGCTTCTCTCCTTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SCPLSVMRKMAPSLQDWPFVLCT*ASLLGL Trigger: GAGGCCAAGGAGAGAAGCGCAAGTGCAGAGCACAAA...TGGCCAGTCCTGCAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR GCA 90 bp | GGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTTTTCTCTGGCTTGTCTaGATCTCTGCTTTTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSGHSRPFLSRLGLRGAVFLWLV*ISAFLP Trigger: AGGGAGAAAAGCAGAGATGCAGACAAGCCAGAGAAA...AACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR GCA 90 bp | GGGCGGTTCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGCAGGAGCCTCCACCACAAACTaGTCGTCATCCTCATTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRFLPLVRHEEDGSISAGASTTN*SSSSLS Trigger: TGACAATGAGGATGACGAGCAGTTTGTGGTGGAGGC...TCCTGCAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGGCGGTTCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGGCACAGATCTTGTCCTaGTGGTCTCTGATCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QRGGSCPLSVMRKMAPSLAQILS*WSLICC Trigger: GCAACAGATCAGAGACCAGCAGGACAAGATCTGTGC...CAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCCCCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR GCA 90 bp | CAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTGCTTCCTTCCAGTGAATaGTTCGATCGCCGTTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QGTAGHFSADWGSEGRFLLPSSE*FDRRFD Trigger: ATCAAAACGGCGATCGAAGCATTCACTGGAAGGAAG...CAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000189341.7 |
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| CDS-3UTR CCA 90 bp | TCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGCAGGACTGGCCATACACAGGGTCTGGATaGACACGCGGAGCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SCPLSVMRKMAPSLQDWPYTGSG*TRGASL Trigger: TAGAGAAGCTCCGCGTGTCCATCCAGACCCTGTGTA...TGGCCAGTCCTGCAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR TCA 90 bp | ACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGACACCTGACACCATCATaGCCACATCTATGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLAGSGHSRPFLSRLGLRHLTPS*PHLWPS Trigger: AGAAGGCCATAGATGTGGTCATGATGGTGTCAGGTG...TCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR TCA 90 bp | AGTGCTAGTATGGAGTCCTGGGAGACTCAAAAGCAGAACTCTGGGCCTGCTGTTTGCTCTCTTGTCGTTTaGCCCTGGGAGGTGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SASMESWETQKQNSGPAVCSLVV*PWEVLA Trigger: GGCCAGCACCTCCCAGGGTCAAACGACAAGAGAGCA...AACAGCAGGCCCAGAGTTCTGCTTTTGAGTCTCCCAGGACTCCATACTAGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| CDS-3UTR TCA 90 bp | ACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGACCTTCTCACCAGGCTTaGGAGACTGCTGCAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLAGSGHSRPFLSRLGLRPSHQA*ETAAIS Trigger: AGAAATTGCAGCAGTCTCTCAAGCCTGGTGAGAAGG...TCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR TCA 90 bp | GAGAAGGGCCATGTCAGCCCTTCATGCGACAATGTCCTCTTAAAGAGGCCTGGGCCTGGATGTAGTCCATaGTCTTTCCCAGGGGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: EKGHVSPSCDNVLLKRPGPGCSP*SFPGEA Trigger: CGCTTCCCCTGGGAAAGATCATGGACTACATCCAGG...CCCAGGCCTCTTTAAGAGGACATTGTCGCATGAAGGGCTGACATGGCCCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| CDS-3UTR TCA 90 bp | GCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTATCATCTATTTCTaGAGTGGTCGTTTCCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: AGSGHSRPFLSRLGLRGAVIIYF*SGRFLI Trigger: GATCAGGAAACGACCACTTCAGAAATAGATGATAAC...CGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189341.7 |
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| CDS-3UTR GCA 90 bp | GCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCGTCAGCCTCCATCTCTaGTTTGACATCTTTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQGTAGHFSADWGSEGRFVSLHL*FDIFER Trigger: TCTTTCAAAGATGTCAAAGCAGAGATGGAGGCTGAC...GAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| CDS-3UTR GCA 90 bp | CTGCAGAAAGAAGCCTATACAATAAGAGAGCAGCAACCCCGCCCAGGTGACAGGAGGGCTTCGGCATGCTaGCTGTTCTCACTGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQKEAYTIREQQPRPGDRRASAC*LFSLCH Trigger: GTGGCACAGTGAGAACAGGCAGCATGCCGAAGCCCT...CCTGTCACCTGGGCGGGGTTGCTGCTCTCTTATTGTATAGGCTTCTTTCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| CDS-3UTR CCA 90 bp | CAGAGGGGCGGTTCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGCCTCTTTGTGTATTCTaGACTCTTCCTCCTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QRGGSCPLSVMRKMAPSLPLCVF*TLPPSH Trigger: GTGGGAAGGAGGAAGAGTCCAGAATACACAAAGAGG...CAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCCCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR CCA 90 bp | GTAGTGCCTAAACCGAAAGATCTGACCTTAGCTGGCTCAGGGCACAGCAGGCCAACCTCCGGCTTATCTTaGCCAGCAGGTCCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVPKPKDLTLAGSGHSRPTSGLS*PAGPAS Trigger: AGAAGCTGGACCTGCTGGCCAAGATAAGCCGGAGGT...TGGCCTGCTGTGCCCTGAGCCAGCTAAGGTCAGATCTTTCGGTTTAGGCACTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR CCA 90 bp | GAAATGGAAGACTACTTCAGACCTTACGCCAGTAAGAACATCTCCAGACACAGTGACCCTGGGAGGTGCTaGCCGTGCACTCCCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: EMEDYFRPYASKNISRHSDPGRC*PCTPRP Trigger: CGGCCTGGGAGTGCACGGCCAGCACCTCCCAGGGTC...ACTGTGTCTGGAGATGTTCTTACTGGCGTAAGGTCTGAAGTAGTCTTCCATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| CDS-3UTR CCA 90 bp | CAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTGCTGTGCACCATTTTCTaGATCTTCTCCTCATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGTAGHFSADWGSEGRFLLCTIF*IFSSFF Trigger: GAAGAATGAGGAGAAGATCCAGAAAATGGTGCACAG...CAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR TCA 90 bp | AAAGATCTGACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGCCTGGATGTAGTCCATaGTCTTTCCCAGGGGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KDLTLAGSGHSRPFLSRLPGCSP*SFPGEA Trigger: CGCTTCCCCTGGGAAAGATCATGGACTACATCCAGG...CAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGTCAGATCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR GCA 90 bp | AAGGGCCATGTCAGCCCTTCATGCGACAATGTCCTCTTAAAGAGGCCTGGGGGACCTTCTCCCGAGGCTTaGTGTCTTCCTTCAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGHVSPSCDNVLLKRPGGPSPEA*CLPSVP Trigger: AGGAACTGAAGGAAGACAGCAAGCCTCGGGAGAAGG...TCCCCCAGGCCTCTTTAAGAGGACATTGTCGCATGAAGGGCTGACATGGCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| CDS-3UTR CCA 90 bp | CCTAAACCGAAAGATCTGACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCCAGGTAGCGGAACGGTaGCTTGTTGAGCAGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PKPKDLTLAGSGHSRPFLQVAER*LVEQLL Trigger: GAGAAGCTGCTCAACAAGCCACCGTTCCGCTACCTG...GAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGTCAGATCTTTCGGTTTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR CCA 90 bp | AAAGATCTGACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGCAGGTAGCGGAACGGTaGCTTGTTGAGCAGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KDLTLAGSGHSRPFLSRLQVAER*LVEQLL Trigger: GAGAAGCTGCTCAACAAGCCACCGTTCCGCTACCTG...CAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGTCAGATCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR CCA 90 bp | AGATCTGACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGGCCACAATTCTAGCTaGTTTTGCTGCCAAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSDLSWLRAQQAISQQTGGHNSS*FCCQGF Trigger: GAACCCTTGGCAGCAAAACCAGCTAGAATTGTGGCC...CCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGTCAGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR CCA 90 bp | GACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGTCATTGTCAGAGTTCTaGGAGTCGATGATCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: DLSWLRAQQAISQQTGAQSLSEF*ESMITL Trigger: CAGTGTGATCATCGACTCCCAGAACTCTGACAATGA...CTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| 3UTR CAA 72 bp | ATCCTTCCCTCCCCTAACCTATCTGGAAGCATCTGTTaGGCAGGGTGGTGCGGTGTGCTTCAGACAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILPSPNLSGSIC*AGWCGVLQTGK Trigger: CTTTCCTGTCTGAAGCACACCGCACCACCCTGCCAAACAGATGCTTCCAGATAGGTTAGGGGAGGGAAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| CDS-3UTR TCA 90 bp | TCAGTCTCTCCTCACTCCCAACTTGTAGAGCACACCTTCACCAAAGAGAAGGGCAATGTCTGCGATTTCTaGCAGCTGAGGGGCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVSPHSQLVEHTFTKEKGNVCDF*QLRGSL Trigger: GAGGCTGCCCCTCAGCTGTCAGAAATCGCAGACATT...GCCCTTCTCTTTGGTGAAGGTGTGCTCTACAAGTTGGGAGTGAGGAGAGACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| CDS-3UTR GCA 90 bp | CCTAAACCGAAAGATCTGACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCTTTGTGCTCTGCACTTaGGCTTCTCTCCTTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PKPKDLTLAGSGHSRPFLFVLCT*ASLLGL Trigger: GAGGCCAAGGAGAGAAGCGCAAGTGCAGAGCACAAA...GAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGTCAGATCTTTCGGTTTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR GCA 90 bp | TCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGCAGGACTGGCCATTTCTCTGGCTTGTCTaGATCTCTGCTTTTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SCPLSVMRKMAPSLQDWPFLWLV*ISAFLP Trigger: AGGGAGAAAAGCAGAGATGCAGACAAGCCAGAGAAA...TGGCCAGTCCTGCAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR GCA 90 bp | CCTAAACCGAAAGATCTGACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCCGTCGAGGACCTAGATaGTCCCACAGAAATGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKPKDLTLAGSGHSRPFLRRGPR*SHRNVS Trigger: GCTGACATTTCTGTGGGAGCATCTAGGTCCTCGACG...GAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGTCAGATCTTTCGGTTTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR GCA 90 bp | CCTAAACCGAAAGATCTGACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCTGCCTGTTCTCACTGTaGCACAGCTGCAGCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PKPKDLTLAGSGHSRPFLCLFSL*HSCSSF Trigger: GAATGAGCTGCAGCTGTGGCACAGTGAGAACAGGCA...GAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGTCAGATCTTTCGGTTTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CCA 90 bp | AGATCTGACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGTTGCGCTTCTCTCCTTaGCCTCAGAGCTTCGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RSDLSWLRAQQAISQQTGLRFSP*PQSFVY Trigger: ATAAACGAAGCTCTGAGGCCAAGGAGAGAAGCGCAA...CCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGTCAGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CCA 90 bp | CAGAGGGGCGGTTCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGGCTTCTCTATCTCCTTaGAAACGATGTCTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QRGGSCPLSVMRKMAPSLASLSP*KRCLSP Trigger: AGGAGAAAGACATCGTTTCCAAGGAGATAGAGAAGC...CAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCCCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGGCGGTTCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGATCCTTGACATTTTCTaGCTTCATCTCAGCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QRGGSCPLSVMRKMAPSLILDIF*LHLSIC Trigger: ACAGATGCTGAGATGAAGTCAGAAAATGTCAAGGAT...CAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCCCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR TCA 90 bp | GTGCTAAGGCAGTCTTCACACATCCCAGGGTGTGATGCAGTGCACAAAAGAAATATCCTCCAGCTCCCCTaGCGGCACCATGTCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLRQSSHIPGCDAVHKRNILQLP*RHHVNV Trigger: GACATTGACATGGTGCCGTCAGGGGAGCTGGAGGAT...ATTTCTTTTGTGCACTGCATCACACCCTGGGATGTGTGAAGACTGCCTTAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CCA 90 bp | ACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGCTTCTCTATCTCCTTaGAAACGATGTCTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLAGSGHSRPFLSRLGLRASLSP*KRCLSP Trigger: AGGAGAAAGACATCGTTTCCAAGGAGATAGAGAAGC...TCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CCA 90 bp | ACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGACTGTGCACCATTTTCTaGATCTTCTCCTCATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLAGSGHSRPFLSRLGLRLCTIF*IFSSFF Trigger: GAAGAATGAGGAGAAGATCCAGAAAATGGTGCACAG...TCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR GCA 90 bp | AGCACACCTTCACCAAAGAGAAGGGCCATGTCAGCCCTTCATGCGACAATGTCCGCTTGTCTGCATCTCTaGTTTTCTCCCTGTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: STPSPKRRAMSALHATMSACLHL*FSPCQD Trigger: ATCCTGACAGGGAGAAAAGCAGAGATGCAGACAAGC...GGACATTGTCGCATGAAGGGCTGACATGGCCCTTCTCTTTGGTGAAGGTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGCCATGTCAGCCCTTCATGCGACAATGTCCTCTTAAAGAGGCCTGGGGGAATTGAAGCAGCTCATTaGTTCTTTCAGGTTCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGHVSPSCDNVLLKRPGGIEAAH*FFQVRA Trigger: GGCACGAACCTGAAAGAACCAATGAGCTGCTTCAAT...TCCCCCAGGCCTCTTTAAGAGGACATTGTCGCATGAAGGGCTGACATGGCCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR TCA 90 bp | GAAATGGAAGACTACTTCAGACCTTACGCCAGTAAGAACATCTCCAGACACAGTCCACCGCACTGTCTGTaGTACTCTGCTCCTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EMEDYFRPYASKNISRHSPPHCL*YSAPGS Trigger: TGAGCCAGGAGCAGAGTATCACAGACAGTGCGGTGG...ACTGTGTCTGGAGATGTTCTTACTGGCGTAAGGTCTGAAGTAGTCTTCCATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR GCA 90 bp | ATCCCAGGGTGTGATGCAGTGCACAAAAGAAATACCCAGAAATGGAAGACTACTAGCTGCAGCTCATTCTaGATGGCGTCCACGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPGCDAVHKRNTQKWKTTSCSSF*MASTSS Trigger: GGAGGACGTGGACGCCATGCAGAATGAGCTGCAGCT...AGTAGTCTTCCATTTCTGGGTATTTCTTTTGTGCACTGCATCACACCCTGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCTAGTATGGAGTCCTGGGAGACTCAAAAGCAGAACTCTGGGCCTGCTGTTTTGCGCTTCTCTCCTTaGCCTCAGAGCTTCGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SASMESWETQKQNSGPAVLRFSP*PQSFVY Trigger: ATAAACGAAGCTCTGAGGCCAAGGAGAGAAGCGCAA...AACAGCAGGCCCAGAGTTCTGCTTTTGAGTCTCCCAGGACTCCATACTAGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR TCA 90 bp | CAATCCTTCCCTCCCCTAACCTATCTGGAAGCATCTGTTTGGCAGGGTGGTGCGATCCTTGACATTTTCTaGCTTCATCTCAGCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSFPPLTYLEASVWQGGAILDIF*LHLSIC Trigger: ACAGATGCTGAGATGAAGTCAGAAAATGTCAAGGAT...CGCACCACCCTGCCAAACAGATGCTTCCAGATAGGTTAGGGGAGGGAAGGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR GCA 90 bp | GAACTCTGGGCCTGCTGTTTACCTAGTAGGATGAGACAACTTACCTCCAGAACAGCCTCCACCACAAACTaGTCGTCATCCTCATTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELWACCLPSRMRQLTSRTASTTN*SSSSLS Trigger: TGACAATGAGGATGACGAGCAGTTTGTGGTGGAGGC...TGTTCTGGAGGTAAGTTGTCTCATCCTACTAGGTAAACAGCAGGCCCAGAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CCA 90 bp | GCACAAAAGAAATACCCAGAAATGGAAGACTACTTCAGACCTTACGCCAGTAAGTTCTGTCCCTGTCCTTaGCCCGTGCTCGGGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AQKKYPEMEDYFRPYASKFCPCP*PVLGLS Trigger: AGAAAGCCCGAGCACGGGCCAAGGACAGGGACAGAA...CTTACTGGCGTAAGGTCTGAAGTAGTCTTCCATTTCTGGGTATTTCTTTTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CCA 90 bp | GTAGTGCCTAAACCGAAAGATCTGACCTTAGCTGGCTCAGGGCACAGCAGGCCACATCTATTTCTGAAGTaGTCGTTTCCTGATCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VVPKPKDLTLAGSGHSRPHLFLK*SFPDLV Trigger: AACCAGATCAGGAAACGACCACTTCAGAAATAGATG...TGGCCTGCTGTGCCCTGAGCCAGCTAAGGTCAGATCTTTCGGTTTAGGCACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189341.7 |
||
| CDS-3UTR TCA 90 bp | CTGCAGAAAGAAGCCTATACAATAAGAGAGCAGCAACCCCGCCCAGGTGACAGGTTTGAAAGATCCATCTaGCAGCTTTCTAGATATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQKEAYTIREQQPRPGDRFERSI*QLSRYL Trigger: GAGATATCTAGAAAGCTGTCAGATGGATCTTTCAAA...CCTGTCACCTGGGCGGGGTTGCTGCTCTCTTATTGTATAGGCTTCTTTCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CCA 90 bp | GAAATGGAAGACTACTTCAGACCTTACGCCAGTAAGAACATCTCCAGACACAGTCAGATCTTGTCCTGCTaGTCTCTGATCTGTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EMEDYFRPYASKNISRHSQILSC*SLICCS Trigger: GGAGCAACAGATCAGAGACCAGCAGGACAAGATCTG...ACTGTGTCTGGAGATGTTCTTACTGGCGTAAGGTCTGAAGTAGTCTTCCATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR TCA 90 bp | GCACAAAAGAAATACCCAGAAATGGAAGACTACTTCAGACCTTACGCCAGTAAGCACCTGACACCATCATaGCCACATCTATGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AQKKYPEMEDYFRPYASKHLTPS*PHLWPS Trigger: AGAAGGCCATAGATGTGGTCATGATGGTGTCAGGTG...CTTACTGGCGTAAGGTCTGAAGTAGTCTTCCATTTCTGGGTATTTCTTTTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CAA 90 bp | GGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTGCCTCCCGGTCTCTTCCCTaGTCACGGTCTCGGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GHSRPFLSRLGLRGAVPASRSLP*SRSRSR Trigger: CCGAGACCGAGACCGTGACAAGGGAAGAGACCGGGA...GGCAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | GGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTGCCTCTCTGTCGGCCTCCTaGGCCTTCTCCTTGTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GHSRPFLSRLGLRGAVPASLSAS*AFSLSL Trigger: GAGGGACAAGGAGAAGGCCAAGGAGGCCGACAGAGA...GGCAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | AGCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCTCCCGGTCTCTTCCCTaGTCACGGTCTCGGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SWLRAQQAISQQTGAQRGSRSLP*SRSRSR Trigger: CCGAGACCGAGACCGTGACAAGGGAAGAGACCGGGA...GCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | CAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTGCGGAACGGTGGCTTGTaGAGCAGCTTCTCGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QGTAGHFSADWGSEGRFLRNGGL*SSFSVS Trigger: GCTCACCGAGAAGCTGCTCAACAAGCCACCGTTCCG...CAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | GGGCTGAAGGGCTTCTCACACTGTCCAGGCCCCCAGGCGAGAGCTGGGCTCTGCCTGTCCCGGTCTCTGTaGTTTCTGTCCCTGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLKGFSHCPGPQARAGLCLSRSL*FLSLSL Trigger: CAAGGACAGGGACAGAAACAACAGAGACCGGGACAG...GCAGAGCCCAGCTCTCGCCTGGGGGCCTGGACAGTGTGAGAAGCCCTTCAGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS TCA 90 bp | CCCTGGGAGGTGCTGGCCGTGCACTCCCAGGCCGAGGTATTCTTCTaGGGCTGGAGGGAAGCTCACTGGGAACTTCCGCATTCTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: PWEVLAVHSQAEVFF*GWREAHWELPHSPS Trigger: TGATGGAGAATGCGGAAGTTCCCAGTGAGCTTCCCTCCAGCCTCAGAAGAATACCTCGGCCTGGGAGTGCACGGCCAGCACCTCCCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS CCA 90 bp | CACCAGTGTCTCTGTGCTCTCTTGTCGTTTGACCCTGGGAGGTGCTaGCCGTGCACTCCCAGGCCGAGGTATTCTTCTGAGGCTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HQCLCALLSFDPGRC*PCTPRPRYSSEAGG Trigger: CCCTCCAGCCTCAGAAGAATACCTCGGCCTGGGAGTGCACGGCCAGCACCTCCCAGGGTCAAACGACAAGAGAGCACAGAGACACTGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | CTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTCCTTCTCCCGAGGCTaGCTGTCTTCCTTCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRAQQAISQQTGAQRGGSSFSRG*LSSFSS Trigger: GGAACTGAAGGAAGACAGCAAGCCTCGGGAGAAGGA...GGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | AGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTGCTCCTTCTCCCGAGGCTaGCTGTCTTCCTTCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RAQQAISQQTGAQRGGSCSFSRG*LSSFSS Trigger: GGAACTGAAGGAAGACAGCAAGCCTCGGGAGAAGGA...GCAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | GACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGTTTCTGTCCCTGTCCTaGGCCCGTGCTCGGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DLSWLRAQQAISQQTGAQFLSLS*ARARAF Trigger: GAAAGCCCGAGCACGGGCCAAGGACAGGGACAGAAA...CTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | GGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCTGTCCCGGTCTCTGTaGTTTCTGTCCCTGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSGHSRPFLSRLGLRGAVLSRSL*FLSLSL Trigger: CAAGGACAGGGACAGAAACAACAGAGACCGGGACAG...AACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGGCGGTTCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGCACCTCCGGCTTATCTaGGCCAGCAGGTCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QRGGSCPLSVMRKMAPSLHLRLI*ASRSSF Trigger: GAAGCTGGACCTGCTGGCCAAGATAAGCCGGAGGTG...CAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCCCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS TCA 90 bp | TTCCCGACCTGTCTACCACCAGTGTCTCTGTGCTCTCTTGTCGTTTaGCCCTGGGAGGTGCTGGCCGTGCACTCCCAGGCCGAGGTATTC | + |
|
Preference number: 5 (lower is better) Translates to: FPTCLPPVSLCSLVV*PWEVLAVHSQAEVF Trigger: GAATACCTCGGCCTGGGAGTGCACGGCCAGCACCTCCCAGGGTCAAACGACAAGAGAGCACAGAGACACTGGTGGTAGACAGGTCGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS GCA 90 bp | TGTCTCTGTGCTCTCTTGTCGTTTGACCCTGGGAGGTGCTGGCCGTaGACTCCCAGGCCGAGGTATTCTTCTGAGGCTGGAGGGAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CLCALLSFDPGRCWP*TPRPRYSSEAGGKL Trigger: GAGCTTCCCTCCAGCCTCAGAAGAATACCTCGGCCTGGGAGTGCACGGCCAGCACCTCCCAGGGTCAAACGACAAGAGAGCACAGAGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | GGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTTCCTCCTTCCCACTCTaGTTGTTGGGCTCTTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSGHSRPFLSRLGLRGAVSSFPL*LLGSCA Trigger: AGCACAAGAGCCCAACAACAAGAGTGGGAAGGAGGA...AACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | CAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTGCTGGTCTCTGATCTGTaGCTCCAGCTCAGAAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QGTAGHFSADWGSEGRFLLVSDL*LQLRKL Trigger: GAGCTTTCTGAGCTGGAGCAACAGATCAGAGACCAG...CAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS GCA 90 bp | TACCACCAGTGTCTCTGTGCTCTCTTGTCGTTTGACCCTGGGAGGTaGTGGCCGTGCACTCCCAGGCCGAGGTATTCTTCTGAGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: YHQCLCALLSFDPGR*WPCTPRPRYSSEAG Trigger: TCCAGCCTCAGAAGAATACCTCGGCCTGGGAGTGCACGGCCAGCACCTCCCAGGGTCAAACGACAAGAGAGCACAGAGACACTGGTGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS CCA 90 bp | TATCCTAATCACCTCGGTGATGATGTCGTGCAGGTAGCGGAACGGTaGCTTGTTGAGCAGCTTCTCGGTGAGCGGCGGCCTCCGGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: YPNHLGDDVVQVAER*LVEQLLGERRPPDH Trigger: GTGATCCGGAGGCCGCCGCTCACCGAGAAGCTGCTCAACAAGCCACCGTTCCGCTACCTGCACGACATCATCACCGAGGTGATTAGGATA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS CCA 90 bp | CCGGCTTATCTTGGCCAGCAGGTCCAGCTTCTACTTCTGCATCGCTaGGGGAGTCACCTTTCTGCTTTACTGCTGGCTCTGGCTCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PAYLGQQVQLLLLHR*GSHLSALLLALAQR Trigger: GCGCTGAGCCAGAGCCAGCAGTAAAGCAGAAAGGTGACTCCCCCAGCGATGCAGAAGTAGAAGCTGGACCTGCTGGCCAAGATAAGCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGGCGGTTCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGTCATCACTGGAGAGCTaGCTGAGGCAGCACTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QRGGSCPLSVMRKMAPSLSSLES*LRQHLP Trigger: TGGCAAGTGCTGCCTCAGCAAGCTCTCCAGTGATGA...CAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCCCCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | CAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTGTCCTTCTCACCAGGCTaGAGAGACTGCTGCAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: QGTAGHFSADWGSEGRFLSFSPG*RDCCNF Trigger: GAAATTGCAGCAGTCTCTCAAGCCTGGTGAGAAGGA...CAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS GCA 90 bp | ACCGCACTGTCTGTGATACTCTGCTCCTGGCTCAGGGCTTCGGCATaGTGCCTGTTCTCACTGTGCCACAGCTGCAGCTCATTCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TALSVILCSWLRASA*CLFSLCHSCSSFCM Trigger: CATGCAGAATGAGCTGCAGCTGTGGCACAGTGAGAACAGGCAGCATGCCGAAGCCCTGAGCCAGGAGCAGAGTATCACAGACAGTGCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | AAGGGCCATGTCAGCCCTTCATGCGACAATGTCCTCTTAAAGAGGCCTGGGGGACCTCTCGAGTCCCCCTaGTCCCCAGCTAAGACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KGHVSPSCDNVLLKRPGGPLESP*SPAKTL Trigger: GAGAGTCTTAGCTGGGGACAAGGGGGACTCGAGAGG...TCCCCCAGGCCTCTTTAAGAGGACATTGTCGCATGAAGGGCTGACATGGCCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CAA 90 bp | GGGCTGAAGGGCTTCTCACACTGTCCAGGCCCCCAGGCGAGAGCTGGGCTCTGCCTTCGTTTATCCTCTTaGTGTATTCTGGACTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLKGFSHCPGPQARAGLCLRLSS*CILDSS Trigger: GGAAGAGTCCAGAATACACAAAGAGGATAAACGAAG...GCAGAGCCCAGCTCTCGCCTGGGGGCCTGGACAGTGTGAGAAGCCCTTCAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CAA 90 bp | GGGCGGTTCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGCAGGACTGGTCTCTGATCTGTaGCTCCAGCTCAGAAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRFLPLVRHEEDGSISAGLVSDL*LQLRKL Trigger: GAGCTTTCTGAGCTGGAGCAACAGATCAGAGACCAG...TCCTGCAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS TCA 90 bp | GCAGCTCATTCTGCATGGCGTCCACGTCCTCCTGGATGTAGTCCATaGTCTTTCCCAGGGGAAGCGCACTCTTACACAGGGTCTGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: AAHSAWRPRPPGCSP*SFPGEAHSYTGSGW Trigger: CCATCCAGACCCTGTGTAAGAGTGCGCTTCCCCTGGGAAAGATCATGGACTACATCCAGGAGGACGTGGACGCCATGCAGAATGAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS GCA 90 bp | CATCACCTCCGGCTTATCTTGGCCAGCAGGTCCAGCTTCTACTTCTaGATCGCTGGGGGAGTCACCTTTCTGCTTTACTGCTGGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HHLRLILASRSSFYF*IAGGVTFLLYCWLW Trigger: CCAGAGCCAGCAGTAAAGCAGAAAGGTGACTCCCCCAGCGATGCAGAAGTAGAAGCTGGACCTGCTGGCCAAGATAAGCCGGAGGTGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189341.7 |
||
| CDS CCA 90 bp | AGCTCACTGGGAACTTCCGCATTCTCCATCACCTCCGGCTTATCTTaGCCAGCAGGTCCAGCTTCTACTTCTGCATCGCTGGGGGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSLGTSAFSITSGLS*PAGPASTSASLGES Trigger: TGACTCCCCCAGCGATGCAGAAGTAGAAGCTGGACCTGCTGGCCAAGATAAGCCGGAGGTGATGGAGAATGCGGAAGTTCCCAGTGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | AGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCCTGCGCCTCCATCTCTGCTTaGACATCTTTGAAAGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: RAQQAISQQTGAQRGGSCASISA*TSLKDP Trigger: TGGATCTTTCAAAGATGTCAAAGCAGAGATGGAGGC...GCAGGAACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CAA 90 bp | GGGCGGTTCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGCAGGATCCTTCTCACCAGGCTaGAGAGACTGCTGCAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRFLPLVRHEEDGSISAGSFSPG*RDCCNF Trigger: GAAATTGCAGCAGTCTCTCAAGCCTGGTGAGAAGGA...TCCTGCAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS TCA 90 bp | TCAGGATGTTGGCCTTCACAGCACAGATCTTGTCCTGCTGGTCTCTaGTCTGTTGCTCCAGCTCAGAAAGCTCGGCCTTCAGGGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGCWPSQHRSCPAGL*SVAPAQKARPSGAP Trigger: TGGAGCCCCTGAAGGCCGAGCTTTCTGAGCTGGAGCAACAGATCAGAGACCAGCAGGACAAGATCTGTGCTGTGAAGGCCAACATCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | GGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGGGGCGGTTCTTCGTTTATCCTCTTaGTGTATTCTGGACTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSGHSRPFLSRLGLRGAVLRLSS*CILDSS Trigger: GGAAGAGTCCAGAATACACAAAGAGGATAAACGAAG...AACCGCCCCTCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | TCAGTCTCTCCTCACTCCCAACTTGTAGAGCACACCTTCACCAAAGAGAAGGGCTCTCTGTCGGCCTCCTaGGCCTTCTCCTTGTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVSPHSQLVEHTFTKEKGSLSAS*AFSLSL Trigger: GAGGGACAAGGAGAAGGCCAAGGAGGCCGACAGAGA...GCCCTTCTCTTTGGTGAAGGTGTGCTCTACAAGTTGGGAGTGAGGAGAGACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CAA 90 bp | AGTGCTAGTATGGAGTCCTGGGAGACTCAAAAGCAGAACTCTGGGCCTGCTGTTCACCTCCGGCTTATCTaGGCCAGCAGGTCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SASMESWETQKQNSGPAVHLRLI*ASRSSF Trigger: GAAGCTGGACCTGCTGGCCAAGATAAGCCGGAGGTG...AACAGCAGGCCCAGAGTTCTGCTTTTGAGTCTCCCAGGACTCCATACTAGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CAA 90 bp | ACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCAGCAGACTGGGGCTCAGAGCCTTTTTCTCTGGCTaGTCTGCATCTCTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLAGSGHSRPFLSRLGLRAFFSG*SASLLF Trigger: GAAAAGCAGAGATGCAGACAAGCCAGAGAAAAAGGC...TCTGAGCCCCAGTCTGCTGAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189341.7 |
||
| CDS CCA 90 bp | GCAGCCTCCACCACAAACTGCTCGTCATCCTCATTGTCAGAGTTCTaGGAGTCGATGATCACACTGGAGACGGTTTTACCACTTCCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: AASTTNCSSSSLSEF*ESMITLETVLPLPD Trigger: GTCGGGAAGTGGTAAAACCGTCTCCAGTGTGATCATCGACTCCCAGAACTCTGACAATGAGGATGACGAGCAGTTTGTGGTGGAGGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS-3UTR CAA 90 bp | AGCACACCTTCACCAAAGAGAAGGGCCATGTCAGCCCTTCATGCGACAATGTCCTCCTCCTTCCCACTCTaGTTGTTGGGCTCTTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: STPSPKRRAMSALHATMSSSFPL*LLGSCA Trigger: AGCACAAGAGCCCAACAACAAGAGTGGGAAGGAGGA...GGACATTGTCGCATGAAGGGCTGACATGGCCCTTCTCTTTGGTGAAGGTGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CAA 90 bp | GGCGGTTCCTGCCCCTTGTCCGTCATGAGGAAGATGGCTCCATCTCTGCAGGACTCTGCTTTGACATCTTaGAAAGATCCATCTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGSCPLSVMRKMAPSLQDSALTS*KDPSDS Trigger: GCTGTCAGATGGATCTTTCAAAGATGTCAAAGCAGA...GTCCTGCAGAGATGGAGCCATCTTCCTCATGACGGACAAGGGGCAGGAACCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS TCA 90 bp | GCCTCATCACTGGAGAGCTTGCTGAGGCAGCACTTGCCAATCAATTaGAGCAGCTCATTGGTTCTTTCAGGTTCGTGCCCGGCCACAATT | + |
|
Preference number: 5 (lower is better) Translates to: ASSLESLLRQHLPIN*SSSLVLSGSCPATI Trigger: AATTGTGGCCGGGCACGAACCTGAAAGAACCAATGAGCTGCTTCAATTGATTGGCAAGTGCTGCCTCAGCAAGCTCTCCAGTGATGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS GCA 90 bp | TCCTCATTCTTCAGGATGTTGGCCTTCACAGCACAGATCTTGTCCTaGTGGTCTCTGATCTGTTGCTCCAGCTCAGAAAGCTCGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSFFRMLAFTAQILS*WSLICCSSSESSAF Trigger: GAAGGCCGAGCTTTCTGAGCTGGAGCAACAGATCAGAGACCAGCAGGACAAGATCTGTGCTGTGAAGGCCAACATCCTGAAGAATGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS TCA 90 bp | CCACAAACTGCTCGTCATCCTCATTGTCAGAGTTCTGGGAGTCGATaGTCACACTGGAGACGGTTTTACCACTTCCCGACCTGTCTACCA | + |
|
Preference number: 5 (lower is better) Translates to: PQTARHPHCQSSGSR*SHWRRFYHFPTCLP Trigger: TGGTAGACAGGTCGGGAAGTGGTAAAACCGTCTCCAGTGTGATCATCGACTCCCAGAACTCTGACAATGAGGATGACGAGCAGTTTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | ATCCCAGGGTGTGATGCAGTGCACAAAAGAAATACCCAGAAATGGAAGACTACTTTTCTGTCCCTGTCCTaGGCCCGTGCTCGGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IPGCDAVHKRNTQKWKTTFLSLS*ARARAF Trigger: GAAAGCCCGAGCACGGGCCAAGGACAGGGACAGAAA...AGTAGTCTTCCATTTCTGGGTATTTCTTTTGTGCACTGCATCACACCCTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CAA 90 bp | CCTAAACCGAAAGATCTGACCTTAGCTGGCTCAGGGCACAGCAGGCCATTTCTCCTTCGTGACGACAGGTaGATACTGTGCACCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PKPKDLTLAGSGHSRPFLLRDDR*ILCTIF Trigger: GAAAATGGTGCACAGTATCAACCTGTCGTCACGAAG...GAGAAATGGCCTGCTGTGCCCTGAGCCAGCTAAGGTCAGATCTTTCGGTTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS GCA 90 bp | CTCCCACAGAAATGTCAGCCTTTTTCTCTGGCTTGTCTGCATCTCTaGTTTTCTCCCTGTCAGGATCCCGGGTATGTTCTCCATTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LPQKCQPFSLACLHL*FSPCQDPGYVLHSS Trigger: CGAAGAATGGAGAACATACCCGGGATCCTGACAGGGAGAAAAGCAGAGATGCAGACAAGCCAGAGAAAAAGGCTGACATTTCTGTGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | GCACAAAAGAAATACCCAGAAATGGAAGACTACTTCAGACCTTACGCCAGTAAGCGGAACGGTGGCTTGTaGAGCAGCTTCTCGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AQKKYPEMEDYFRPYASKRNGGL*SSFSVS Trigger: GCTCACCGAGAAGCTGCTCAACAAGCCACCGTTCCG...CTTACTGGCGTAAGGTCTGAAGTAGTCTTCCATTTCTGGGTATTTCTTTTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CAA 90 bp | CTGCAGAAAGAAGCCTATACAATAAGAGAGCAGCAACCCCGCCCAGGTGACAGGGACTTTTTCTCTGGCTaGTCTGCATCTCTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQKEAYTIREQQPRPGDRDFFSG*SASLLF Trigger: GAAAAGCAGAGATGCAGACAAGCCAGAGAAAAAGTC...CCTGTCACCTGGGCGGGGTTGCTGCTCTCTTATTGTATAGGCTTCTTTCTGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS CCA 90 bp | TTCTCTCCTTGGCCTCAGAGCTTCGTTTATCCTCTTTGTGTATTCTaGACTCTTCCTCCTTCCCACTCTTGTTGTTGGGCTCTTGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FSPWPQSFVYPLCVF*TLPPSHSCCWALVL Trigger: AAGCACAAGAGCCCAACAACAAGAGTGGGAAGGAGGAAGAGTCCAGAATACACAAAGAGGATAAACGAAGCTCTGAGGCCAAGGAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS-3UTR CAA 90 bp | GCACAAAAGAAATACCCAGAAATGGAAGACTACTTCAGACCTTACGCCAGTAAGTCATCACTGGAGAGCTaGCTGAGGCAGCACTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AQKKYPEMEDYFRPYASKSSLES*LRQHLP Trigger: TGGCAAGTGCTGCCTCAGCAAGCTCTCCAGTGATGA...CTTACTGGCGTAAGGTCTGAAGTAGTCTTCCATTTCTGGGTATTTCTTTTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CAA 90 bp | GAACTCTGGGCCTGCTGTTTACCTAGTAGGATGAGACAACTTACCTCCAGAACAATATCTCCCCTGAGCTaGAGGACTTTTTCTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ELWACCLPSRMRQLTSRTISPLS*RTFSLA Trigger: AGCCAGAGAAAAAGTCCTCAAGCTCAGGGGAGATAT...TGTTCTGGAGGTAAGTTGTCTCATCCTACTAGGTAAACAGCAGGCCCAGAGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS-3UTR CAA 90 bp | ATCCCAGGGTGTGATGCAGTGCACAAAAGAAATACCCAGAAATGGAAGACTACTCTTCGTGACGACAGGTaGATACTGTGCACCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IPGCDAVHKRNTQKWKTTLRDDR*ILCTIF Trigger: GAAAATGGTGCACAGTATCAACCTGTCGTCACGAAG...AGTAGTCTTCCATTTCTGGGTATTTCTTTTGTGCACTGCATCACACCCTGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
||
| CDS GCA 72 bp | GCCTTCAGGGGCTCCACCGCACTGTCTGTGATACTCTaGTCCTGGCTCAGGGCTTCGGCATGCTGCCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: AFRGSTALSVIL*SWLRASACCLF Trigger: GAACAGGCAGCATGCCGAAGCCCTGAGCCAGGAGCAGAGTATCACAGACAGTGCGGTGGAGCCCCTGAAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CCA 72 bp | CACCTCGGTGATGATGTCGTGCAGGTAGCGGAACGGTaGCTTGTTGAGCAGCTTCTCGGTGAGCGGCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: HLGDDVVQVAER*LVEQLLGERRP Trigger: AGGCCGCCGCTCACCGAGAAGCTGCTCAACAAGCCACCGTTCCGCTACCTGCACGACATCATCACCGAGGTG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS CAA 72 bp | TTCGACGTCCGCTGGGCCCGCCCTCTCGAGTCCCCCTaGTCCCCAGCTAAGACTCTCTTCACTGCCTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: FDVRWARPLESP*SPAKTLFTASS Trigger: TGATGAGGCAGTGAAGAGAGTCTTAGCTGGGGACAAGGGGGACTCGAGAGGGCGGGCCCAGCGGACGTCGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CAA 90 bp | TCTTGTGCTTTCGACGTCCGCTGGGCCCGCCCTCTCGAGTCCCCCTaGTCCCCAGCTAAGACTCTCTTCACTGCCTCATCACTGGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCAFDVRWARPLESP*SPAKTLFTASSLES Trigger: GCTCTCCAGTGATGAGGCAGTGAAGAGAGTCTTAGCTGGGGACAAGGGGGACTCGAGAGGGCGGGCCCAGCGGACGTCGAAAGCACAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS GCA 72 bp | CTCTTCCTCCTTCCCACTCTTGTTGTTGGGCTCTTGTaGTTTCGACGTCCGCTGGGCCCGCCCTCTCGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LFLLPTLVVGLL*FRRPLGPPSRV Trigger: GACTCGAGAGGGCGGGCCCAGCGGACGTCGAAAGCACAAGAGCCCAACAACAAGAGTGGGAAGGAGGAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS GCA 72 bp | GCTCTCTTGTCGTTTGACCCTGGGAGGTGCTGGCCGTaGACTCCCAGGCCGAGGTATTCTTCTGAGGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: ALLSFDPGRCWP*TPRPRYSSEAG Trigger: TCCAGCCTCAGAAGAATACCTCGGCCTGGGAGTGCACGGCCAGCACCTCCCAGGGTCAAACGACAAGAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CCA 72 bp | CTCTGTCCCGGTCTCTGTTGTTTCTGTCCCTGTCCTTaGCCCGTGCTCGGGCTTTCTCTCGCTCTCCGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LCPGLCCFCPCP*PVLGLSLALRL Trigger: GAGACGGAGAGCGAGAGAAAGCCCGAGCACGGGCCAAGGACAGGGACAGAAACAACAGAGACCGGGACAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CCA 72 bp | TGCATCGCTGGGGGAGTCACCTTTCTGCTTTACTGCTaGCTCTGGCTCAGCGCTCTCCCGCCACAGACTAGC | + |
|
Preference number: 6 (lower is better) Translates to: CIAGGVTFLLYC*LWLSALPPQTS Trigger: GCTAGTCTGTGGCGGGAGAGCGCTGAGCCAGAGCCAGCAGTAAAGCAGAAAGGTGACTCCCCCAGCGATGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189341.7 |
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| CDS CAA 90 bp | CTTCCCGACCTGTCTACCACCAGTGTCTCTGTGCTCTCTTGTCGTTaGACCCTGGGAGGTGCTGGCCGTGCACTCCCAGGCCGAGGTATT | + |
|
Preference number: 6 (lower is better) Translates to: LPDLSTTSVSVLSCR*TLGGAGRALPGRGI Trigger: AATACCTCGGCCTGGGAGTGCACGGCCAGCACCTCCCAGGGTCAAACGACAAGAGAGCACAGAGACACTGGTGGTAGACAGGTCGGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CAA 90 bp | TTTACCACTTCCCGACCTGTCTACCACCAGTGTCTCTGTGCTCTCTaGTCGTTTGACCCTGGGAGGTGCTGGCCGTGCACTCCCAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: FTTSRPVYHQCLCAL*SFDPGRCWPCTPRP Trigger: CGGCCTGGGAGTGCACGGCCAGCACCTCCCAGGGTCAAACGACAAGAGAGCACAGAGACACTGGTGGTAGACAGGTCGGGAAGTGGTAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS GCA 72 bp | TTCTGCATCGCTGGGGGAGTCACCTTTCTGCTTTACTaGTGGCTCTGGCTCAGCGCTCTCCCGCCACAGACT | + |
|
Preference number: 6 (lower is better) Translates to: FCIAGGVTFLLY*WLWLSALPPQT Trigger: AGTCTGTGGCGGGAGAGCGCTGAGCCAGAGCCAGCAGTAAAGCAGAAAGGTGACTCCCCCAGCGATGCAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189341.7 |
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| CDS GCA 72 bp | GCTTCTACTTCTGCATCGCTGGGGGAGTCACCTTTCTaGTTTACTGCTGGCTCTGGCTCAGCGCTCTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ASTSASLGESPF*FTAGSGSALSR Trigger: GCGGGAGAGCGCTGAGCCAGAGCCAGCAGTAAAGCAGAAAGGTGACTCCCCCAGCGATGCAGAAGTAGAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189341.7 |
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| CDS CCA 72 bp | CTCTGTGCTCTCTTGTCGTTTGACCCTGGGAGGTGCTaGCCGTGCACTCCCAGGCCGAGGTATTCTTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LCALLSFDPGRC*PCTPRPRYSSE Trigger: CTCAGAAGAATACCTCGGCCTGGGAGTGCACGGCCAGCACCTCCCAGGGTCAAACGACAAGAGAGCACAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CAA 72 bp | TCTCTGTCCCGGTCTCTGTTGTTTCTGTCCCTGTCCTaGGCCCGTGCTCGGGCTTTCTCTCGCTCTCCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLSRSLLFLSLS*ARARAFSRSPS Trigger: AGACGGAGAGCGAGAGAAAGCCCGAGCACGGGCCAAGGACAGGGACAGAAACAACAGAGACCGGGACAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CAA 90 bp | GTTGGCCTTCACAGCACAGATCTTGTCCTGCTGGTCTCTGATCTGTaGCTCCAGCTCAGAAAGCTCGGCCTTCAGGGGCTCCACCGCACT | + |
|
Preference number: 6 (lower is better) Translates to: VGLHSTDLVLLVSDL*LQLRKLGLQGLHRT Trigger: AGTGCGGTGGAGCCCCTGAAGGCCGAGCTTTCTGAGCTGGAGCAACAGATCAGAGACCAGCAGGACAAGATCTGTGCTGTGAAGGCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS GCA 72 bp | TGTCTCTGTGCTCTCTTGTCGTTTGACCCTGGGAGGTaGTGGCCGTGCACTCCCAGGCCGAGGTATTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CLCALLSFDPGR*WPCTPRPRYSS Trigger: AGAAGAATACCTCGGCCTGGGAGTGCACGGCCAGCACCTCCCAGGGTCAAACGACAAGAGAGCACAGAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS GCA 72 bp | TCTGTGATACTCTGCTCCTGGCTCAGGGCTTCGGCATaGTGCCTGTTCTCACTGTGCCACAGCTGCAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SVILCSWLRASA*CLFSLCHSCSS Trigger: TGAGCTGCAGCTGTGGCACAGTGAGAACAGGCAGCATGCCGAAGCCCTGAGCCAGGAGCAGAGTATCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CCA 72 bp | GTATTCTGGACTCTTCCTCCTTCCCACTCTTGTTGTTaGGCTCTTGTGCTTTCGACGTCCGCTGGGCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VFWTLPPSHSCC*ALVLSTSAGPA Trigger: GGCGGGCCCAGCGGACGTCGAAAGCACAAGAGCCCAACAACAAGAGTGGGAAGGAGGAAGAGTCCAGAATAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CCA 72 bp | CTTGGCCAGCAGGTCCAGCTTCTACTTCTGCATCGCTaGGGGAGTCACCTTCCAGTGAATGCTTCGATCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGQQVQLLLLHR*GSHLPVNASIA Trigger: GGCGATCGAAGCATTCACTGGAAGGTGACTCCCCCAGCGATGCAGAAGTAGAAGCTGGACCTGCTGGCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| CDS CAA 90 bp | TCCTCTTTGTGTATTCTGGACTCTTCCTCCTTCCCACTCTTGTTGTaGGGCTCTTGTGCTTTCGACGTCCGCTGGGCCCGCCCTCTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSLCILDSSSFPLLL*GSCAFDVRWARPLE Trigger: CTCGAGAGGGCGGGCCCAGCGGACGTCGAAAGCACAAGAGCCCAACAACAAGAGTGGGAAGGAGGAAGAGTCCAGAATACACAAAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CAA 90 bp | AAGCTCACTGGGAACTTCCGCATTCTCCATCACCTCCGGCTTATCTaGGCCAGCAGGTCCAGCTTCTACTTCTGCATCGCTGGGGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: KLTGNFRILHHLRLI*ASRSSFYFCIAGGV Trigger: GACTCCCCCAGCGATGCAGAAGTAGAAGCTGGACCTGCTGGCCAAGATAAGCCGGAGGTGATGGAGAATGCGGAAGTTCCCAGTGAGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS TCA 72 bp | TCTGCATGGCGTCCACGTCCTCCTGGATGTAGTCCATaGTCTTTCCCAGGGGAAGCGCACTCTTACACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SAWRPRPPGCSP*SFPGEAHSYTG Trigger: CCCTGTGTAAGAGTGCGCTTCCCCTGGGAAAGATCATGGACTACATCCAGGAGGACGTGGACGCCATGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS CCA 72 bp | CTTGGCCAGCAGGTCCAGCTTCTACTTCTGCATCGCTaGGGGAGTCACCTTTCTGCTTTACTGCTGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGQQVQLLLLHR*GSHLSALLLAL Trigger: CAGAGCCAGCAGTAAAGCAGAAAGGTGACTCCCCCAGCGATGCAGAAGTAGAAGCTGGACCTGCTGGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189341.7 |
||
| CDS CAA 72 bp | TGTATTCTGGACTCTTCCTCCTTCCCACTCTTGTTGTaGGGCTCTTGTGCTTTCGACGTCCGCTGGGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: CILDSSSFPLLL*GSCAFDVRWAR Trigger: GCGGGCCCAGCGGACGTCGAAAGCACAAGAGCCCAACAACAAGAGTGGGAAGGAGGAAGAGTCCAGAATACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS GCA 72 bp | CGGCTTATCTTGGCCAGCAGGTCCAGCTTCTACTTCTaGATCGCTGGGGGAGTCACCTTTCTGCTTTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: RLILASRSSFYF*IAGGVTFLLYC Trigger: GCAGTAAAGCAGAAAGGTGACTCCCCCAGCGATGCAGAAGTAGAAGCTGGACCTGCTGGCCAAGATAAGCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189341.7 |
||
| CDS CCA 72 bp | TTCCCAGGGGAAGCGCACTCTTACACAGGGTCTGGATaGACACGCGGAGCTTCTCTATCTCCTTGGAAACGA | + |
|
Preference number: 6 (lower is better) Translates to: FPGEAHSYTGSG*TRGASLSPWKR Trigger: TCGTTTCCAAGGAGATAGAGAAGCTCCGCGTGTCCATCCAGACCCTGTGTAAGAGTGCGCTTCCCCTGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS CAA 72 bp | GGGAACTTCCGCATTCTCCATCACCTCCGGCTTATCTaGGCCAGCAGGTCCAGCTTCTACTTCTGCATCGCT | + |
|
Preference number: 6 (lower is better) Translates to: GNFRILHHLRLI*ASRSSFYFCIA Trigger: AGCGATGCAGAAGTAGAAGCTGGACCTGCTGGCCAAGATAAGCCGGAGGTGATGGAGAATGCGGAAGTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS CAA 90 bp | CGTTTATCCTCTTTGTGTATTCTGGACTCTTCCTCCTTCCCACTCTaGTTGTTGGGCTCTTGTGCTTTCGACGTCCGCTGGGCCCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RLSSLCILDSSSFPL*LLGSCAFDVRWARP Trigger: AGGGCGGGCCCAGCGGACGTCGAAAGCACAAGAGCCCAACAACAAGAGTGGGAAGGAGGAAGAGTCCAGAATACACAAAGAGGATAAACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
||
| CDS CCA 72 bp | ATCTTTCCCAGGGGAAGCGCACTCTTACACAGGGTCTaGATGGACACGCGGAGCTTCTCTATCTCCTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: IFPRGSALLHRV*MDTRSFSISLE Trigger: TTCCAAGGAGATAGAGAAGCTCCGCGTGTCCATCCAGACCCTGTGTAAGAGTGCGCTTCCCCTGGGAAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS TCA 72 bp | CTGGAGAGCTTGCTGAGGCAGCACTTGCCAATCAATTaGAGCAGCTCATTGGTTCTTTCAGGTTCGTGCCCG | + |
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Preference number: 6 (lower is better) Translates to: LESLLRQHLPIN*SSSLVLSGSCP Trigger: CGGGCACGAACCTGAAAGAACCAATGAGCTGCTTCAATTGATTGGCAAGTGCTGCCTCAGCAAGCTCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS TCA 72 bp | GCTCGTCATCCTCATTGTCAGAGTTCTGGGAGTCGATaGTCACACTGGAGACGGTTTTACCACTTCCCGACC | + |
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Preference number: 6 (lower is better) Translates to: ARHPHCQSSGSR*SHWRRFYHFPT Trigger: GGTCGGGAAGTGGTAAAACCGTCTCCAGTGTGATCATCGACTCCCAGAACTCTGACAATGAGGATGACGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS GCA 72 bp | TTCAGGATGTTGGCCTTCACAGCACAGATCTTGTCCTaGTGGTCTCTGATCTGTTGCTCCAGCTCAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: FRMLAFTAQILS*WSLICCSSSES Trigger: GCTTTCTGAGCTGGAGCAACAGATCAGAGACCAGCAGGACAAGATCTGTGCTGTGAAGGCCAACATCCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CAA 72 bp | TCTTTGTGTATTCTGGACTCTTCCTCCTTCCCACTCTaGTTGTTGGGCTCTTGTGCTTTCGACGTCCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SLCILDSSSFPL*LLGSCAFDVRW Trigger: CCAGCGGACGTCGAAAGCACAAGAGCCCAACAACAAGAGTGGGAAGGAGGAAGAGTCCAGAATACACAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CAA 90 bp | ATCTTCTCCTCATTCTTCAGGATGTTGGCCTTCACAGCACAGATCTaGTCCTGCTGGTCTCTGATCTGTTGCTCCAGCTCAGAAAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: IFSSFFRMLAFTAQI*SCWSLICCSSSESS Trigger: CGAGCTTTCTGAGCTGGAGCAACAGATCAGAGACCAGCAGGACAAGATCTGTGCTGTGAAGGCCAACATCCTGAAGAATGAGGAGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CAA 90 bp | CTCTTACACAGGGTCTGGATGGACACGCGGAGCTTCTCTATCTCCTaGGAAACGATGTCTTTCTCCTTCTTCCATGCTGACTCAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: LLHRVWMDTRSFSIS*ETMSFSFFHADSKM Trigger: CATCTTTGAGTCAGCATGGAAGAAGGAGAAAGACATCGTTTCCAAGGAGATAGAGAAGCTCCGCGTGTCCATCCAGACCCTGTGTAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CCA 72 bp | TGGCCTCAGAGCTTCGTTTATCCTCTTTGTGTATTCTaGACTCTTCCTCCTTCCCACTCTTGTTGTTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: WPQSFVYPLCVF*TLPPSHSCCWA Trigger: AGCCCAACAACAAGAGTGGGAAGGAGGAAGAGTCCAGAATACACAAAGAGGATAAACGAAGCTCTGAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CCA 72 bp | CCTTCTGTTTGTGCTCTGCACTTGCGCTTCTCTCCTTaGCCTCAGAGCTTCGTTTATCCTCTTTGTGTATTC | + |
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Preference number: 6 (lower is better) Translates to: PSVCALHLRFSP*PQSFVYPLCVF Trigger: GAATACACAAAGAGGATAAACGAAGCTCTGAGGCCAAGGAGAGAAGCGCAAGTGCAGAGCACAAACAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CCA 72 bp | ACCACAAACTGCTCGTCATCCTCATTGTCAGAGTTCTaGGAGTCGATGATCACACTGGAGACGGTTTTACCA | + |
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Preference number: 6 (lower is better) Translates to: TTNCSSSSLSEF*ESMITLETVLP Trigger: TGGTAAAACCGTCTCCAGTGTGATCATCGACTCCCAGAACTCTGACAATGAGGATGACGAGCAGTTTGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CAA 72 bp | CTTCTCTCCTTGGCCTCAGAGCTTCGTTTATCCTCTTaGTGTATTCTGGACTCTTCCTCCTTCCCACTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LLSLASELRLSS*CILDSSSFPLL Trigger: CAAGAGTGGGAAGGAGGAAGAGTCCAGAATACACAAAGAGGATAAACGAAGCTCTGAGGCCAAGGAGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047242.9 ENSMUST00000189341.7 |
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| CDS CAA 90 bp | GAGGACCTAGATGCTCCCACAGAAATGTCAGCCTCCATCTCTGCTTaGACATCTTTGAAAGATCCATCTGACAGCTTTCTAGATATCTCC | + |
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Preference number: 6 (lower is better) Translates to: EDLDAPTEMSASISA*TSLKDPSDSFLDIS Trigger: GGAGATATCTAGAAAGCTGTCAGATGGATCTTTCAAAGATGTCAAAGCAGAGATGGAGGCTGACATTTCTGTGGGAGCATCTAGGTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| CDS CAA 72 bp | GATGCTCCCACAGAAATGTCAGCCTCCATCTCTGCTTaGACATCTTTGAAAGATCCATCTGACAGCTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: DAPTEMSASISA*TSLKDPSDSFL Trigger: TAGAAAGCTGTCAGATGGATCTTTCAAAGATGTCAAAGCAGAGATGGAGGCTGACATTTCTGTGGGAGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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| CDS CAA 72 bp | ACAGAAATGTCAGCCTCCATCTCTGCTTTGACATCTTaGAAAGATCCATCTGACAGCTTTCTAGATATCTCC | + |
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Preference number: 6 (lower is better) Translates to: TEMSASISALTS*KDPSDSFLDIS Trigger: GGAGATATCTAGAAAGCTGTCAGATGGATCTTTCAAAGATGTCAAAGCAGAGATGGAGGCTGACATTTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047242.9 |
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