Pregenerated sensors for TRAF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026942Ensembl transcript IDs: ENSMUST00000028311.13, ENSMUST00000114234.2
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGGGCCCCGGCAGGGTCCACCTCCATCACAGCATGCTCACAGCTaGGCATGTTTGCAGCTGGGCCCGGCAGGGTCCACCTCCATCACA | + |
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Preference number: 1 (lower is better) Translates to: AGPRQGPPPSQHAHS*ACLQLGPAGSTSIT Trigger: TGTGATGGAGGTGGACCCTGCCGGGCCCAGCTGCAAACATGCCCAGCTGTGAGCATGCTGTGATGGAGGTGGACCCTGCCGGGGCCCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR GCA 90 bp | GGCAGGGTCCACCTCCATCACAGCATGCTCACAGCTGGGCATGTTTaGAGCTGGGCCCGGCAGGGTCCACCTCCATCACAGCATGCTCAC | + |
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Preference number: 1 (lower is better) Translates to: GRVHLHHSMLTAGHV*SWARQGPPPSQHAH Trigger: GTGAGCATGCTGTGATGGAGGTGGACCCTGCCGGGCCCAGCTGCAAACATGCCCAGCTGTGAGCATGCTGTGATGGAGGTGGACCCTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR CCA 90 bp | CTCCTCCTCCATCACAGCATGCTCGCAGCTGGGCATGTTTGCAGCTaGGCCCCGGCAGGGTCCACCTCCATCACAGCATGCTCACAGCTG | + |
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Preference number: 1 (lower is better) Translates to: LLLHHSMLAAGHVCS*APAGSTSITACSQL Trigger: CAGCTGTGAGCATGCTGTGATGGAGGTGGACCCTGCCGGGGCCCAGCTGCAAACATGCCCAGCTGCGAGCATGCTGTGATGGAGGAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR GCA 90 bp | CCGGCAGGGTCCACCTCCATCACAGCATGCTCACAGCTCACACCATaGTGCCCACCACATTTCCTATTGTGCAAACCAGGCAAGGATCCT | + |
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Preference number: 1 (lower is better) Translates to: PAGSTSITACSQLTP*CPPHFLLCKPGKDP Trigger: AGGATCCTTGCCTGGTTTGCACAATAGGAAATGTGGTGGGCAGCATGGTGTGAGCTGTGAGCATGCTGTGATGGAGGTGGACCCTGCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR TCA 90 bp | AACAAGATGCACCCTTCTCCAGCAAGTTACGGGGCCCAGCCAGAGTaGGGTCAGTTTGCCGCCACGATGACAGCTGTGCTGTTTCTGTAC | + |
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Preference number: 1 (lower is better) Translates to: NKMHPSPASYGAQPE*GQFAATMTAVLFLY Trigger: GTACAGAAACAGCACAGCTGTCATCGTGGCGGCAAACTGACCTCACTCTGGCTGGGCCCCGTAACTTGCTGGAGAAGGGTGCATCTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR GCA 90 bp | AGCTTCCAGCGTAAGAACTCACAGGACAGAGAGAAAGAAACAAGATaGACCCTTCTCCAGCAAGTTACGGGGCCCAGCCAGAGTGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: SFQRKNSQDREKETR*TLLQQVTGPSQSEV Trigger: GACCTCACTCTGGCTGGGCCCCGTAACTTGCTGGAGAAGGGTGCATCTTGTTTCTTTCTCTCTGTCCTGTGAGTTCTTACGCTGGAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR TCA 90 bp | TACTCCAGAGCCCATGTAAAATGCTTAGGTCCTGCCCACATGCTGTaGGGTCCTAGATCTCTGCAGAGCAAGCACAACATGTGTAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: YSRAHVKCLGPAHML*GPRSLQSKHNMCKR Trigger: TCTCTTACACATGTTGTGCTTGCTCTGCAGAGATCTAGGACCTCACAGCATGTGGGCAGGACCTAAGCATTTTACATGGGCTCTGGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR CAA 90 bp | GTGTCTCCTCCTCCTCCATCACAGCATGCTCGCAGCTGGGCATGTTaGCAGCTGGGCCCCGGCAGGGTCCACCTCCATCACAGCATGCTC | + |
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Preference number: 2 (lower is better) Translates to: VSPPPPSQHARSWAC*QLGPGRVHLHHSML Trigger: GAGCATGCTGTGATGGAGGTGGACCCTGCCGGGGCCCAGCTGCAAACATGCCCAGCTGCGAGCATGCTGTGATGGAGGAGGAGGAGACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGGGCCTATGTCTCAGAGAGCTTCTCTCTTGGGCTACACCCTGCAGGCGCCTGCCCACCCGTGTGTaGCAGGGCCTGGCTGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: SEGLCLRELLSWATPCRRLPTRV*QGLAGL Trigger: TAGGCCAGCCAGGCCCTGCCACACACGGGTGGGCAG...GCGCCTGCAGGGTGTAGCCCAAGAGAGAAGCTCTCTGAGACATAGGCCCTCACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGCATGTTTGCAGCTGGGCCCCGGCAGGGTCCACCTCCATCACAGCATGCTCACAGCTCACACCATaGTGCCCACCACATTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: AGHVCSWAPAGSTSITACSQLTP*CPPHFL Trigger: TAGGAAATGTGGTGGGCAGCATGGTGTGAGCTGTGA...GCATGCTGTGATGGAGGTGGACCCTGCCGGGGCCCAGCTGCAAACATGCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR-3UTR TCA 90 bp | CGGCAGGGTCCACCTCCATCACAGCATGCTCACAGCTGGGCATGTTTGCAGCTGTTCCTATTGGAAAGCTaGGAAGCTCCCCAGCGGGCT | + |
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Preference number: 2 (lower is better) Translates to: RQGPPPSQHAHSWACLQLFLLES*EAPQRA Trigger: AGCCCGCTGGGGAGCTTCTCAGCTTTCCAATAGGAA...CAGCTGCAAACATGCCCAGCTGTGAGCATGCTGTGATGGAGGTGGACCCTGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR-3UTR GCA 90 bp | AGTGAGGGCCTATGTCTCAGAGAGCTTCTCTCTTGGGCTACACCCTGCAGGCGCCCGTCCAACTCAGTTTaGCAGCTGAAGGCCAACTGG | + |
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Preference number: 2 (lower is better) Translates to: SEGLCLRELLSWATPCRRPSNSV*QLKANW Trigger: CCAGTTGGCCTTCAGCTGGCAAACTGAGTTGGACGG...GCGCCTGCAGGGTGTAGCCCAAGAGAGAAGCTCTCTGAGACATAGGCCCTCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGCCCTTCTCCAGTGAGGGCCTATGTCTCAGAGAGCTTCTCTCTTGGGCTATTCCAAAGGATGGGGTaGGGAAGGCCAGTCACTTTG | + |
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Preference number: 2 (lower is better) Translates to: AGPSPVRAYVSESFSLGLFQRMG*GRPVTL Trigger: CAAAGTGACTGGCCTTCCCCACCCCATCCTTTGGAA...TAGCCCAAGAGAGAAGCTCTCTGAGACATAGGCCCTCACTGGAGAAGGGCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTATGTCTCAGAGAGCTTCTCTCTTGGGCTACACCCTGCAGGCGCATGCCTTCTCTTTTCCAAAGGATaGGGTGGGGAAGGCCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: AYVSESFSLGLHPAGACLLFSKG*GGEGQS Trigger: TGACTGGCCTTCCCCACCCCATCCTTTGGAAAAGAG...AAGGCATGCGCCTGCAGGGTGTAGCCCAAGAGAGAAGCTCTCTGAGACATAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTTAAAATGTCCACTAGAGTCCTCAGAGAAGTACAACTTACTCCAGAGCCCACTGCCCACCCGTGTGTaGCAGGGCCTGGCTGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: WLKCPLESSEKYNLLQSPLPTRV*QGLAGL Trigger: TAGGCCAGCCAGGCCCTGCCACACACGGGTGGGCAG...TGGGCTCTGGAGTAAGTTGTACTTCTCTGAGGACTCTAGTGGACATTTTAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR-3UTR GCA 90 bp | GGACAGAGAGAAAGAAACAAGATGCACCCTTCTCCAGCAAGTTACGGGGCCCAGACCTCCATCACAGCATaGTCACAGCTGGGCATGTTT | + |
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Preference number: 2 (lower is better) Translates to: GQRERNKMHPSPASYGAQTSITA*SQLGMF Trigger: AAACATGCCCAGCTGTGAGCATGCTGTGATGGAGGT...CTGGGCCCCGTAACTTGCTGGAGAAGGGTGCATCTTGTTTCTTTCTCTCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR CAA 90 bp | ACAGCATGCTCACAGCTCACACCATGCTGCCCACCACATTTCCTATaGTGCAAACCAGGCAAGGATCCTGAGACAAAGGCCTGTACATTG | + |
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Preference number: 2 (lower is better) Translates to: TACSQLTPCCPPHFL*CKPGKDPETKACTL Trigger: CAATGTACAGGCCTTTGTCTCAGGATCCTTGCCTGGTTTGCACAATAGGAAATGTGGTGGGCAGCATGGTGTGAGCTGTGAGCATGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR-3UTR GCA 90 bp | AGAAATCCTAGAGCAATAATCCTGGTTAAAATGTCCACTAGAGTCCTCAGAGAACCGTCCAACTCAGTTTaGCAGCTGAAGGCCAACTGG | + |
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Preference number: 2 (lower is better) Translates to: RNPRAIILVKMSTRVLREPSNSV*QLKANW Trigger: CCAGTTGGCCTTCAGCTGGCAAACTGAGTTGGACGG...TTCTCTGAGGACTCTAGTGGACATTTTAACCAGGATTATTGCTCTAGGATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR-3UTR CAA 90 bp | CGCAGCTGGGCATGTTTGCAGCTGGGCCCCGGCAGGGTCCACCTCCATCACAGCGGCTCCACCAGGCCCTaGAGCTCAGTGGACCGTCCA | + |
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Preference number: 3 (lower is better) Translates to: RSWACLQLGPGRVHLHHSGSTRP*SSVDRP Trigger: TGGACGGTCCACTGAGCTCAAGGGCCTGGTGGAGCC...GCTGTGATGGAGGTGGACCCTGCCGGGGCCCAGCTGCAAACATGCCCAGCTGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR-3UTR CAA 90 bp | GCTGGGCATGTTTGCAGCTGGGCCCCGGCAGGGTCCACCTCCATCACAGCATGCCACAGCTGGGCATGTTaGCAGCTGGGCCCGGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: AGHVCSWAPAGSTSITACHSWAC*QLGPAG Trigger: CCCTGCCGGGCCCAGCTGCAAACATGCCCAGCTGTG...GCATGCTGTGATGGAGGTGGACCCTGCCGGGGCCCAGCTGCAAACATGCCCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR GCA 72 bp | AGCTGGGCCCCGGCAGGGTCCACCTCCATCACAGCATaGTCACAGCTGGGCATGTTTGCAGCTGGGCCCGGC | + |
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Preference number: 3 (lower is better) Translates to: SWAPAGSTSITA*SQLGMFAAGPG Trigger: GCCGGGCCCAGCTGCAAACATGCCCAGCTGTGAGCATGCTGTGATGGAGGTGGACCCTGCCGGGGCCCAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR CCA 72 bp | CGGCAGGGTCCACCTCCATCACAGCATGCTCACAGCTaGGCATGTTTGCAGCTGGGCCCGGCAGGGTCCACC | + |
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Preference number: 3 (lower is better) Translates to: RQGPPPSQHAHS*ACLQLGPAGST Trigger: GGTGGACCCTGCCGGGCCCAGCTGCAAACATGCCCAGCTGTGAGCATGCTGTGATGGAGGTGGACCCTGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR CCA 72 bp | GTGTCTCCTCCTCCTCCATCACAGCATGCTCGCAGCTaGGCATGTTTGCAGCTGGGCCCCGGCAGGGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: VSPPPPSQHARS*ACLQLGPGRVH Trigger: GTGGACCCTGCCGGGGCCCAGCTGCAAACATGCCCAGCTGCGAGCATGCTGTGATGGAGGAGGAGGAGACAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR GCA 72 bp | TCACTTCTCCCCCATACAGGCCACCTGGCAAGGCTGTaGAGCCCAGGCAGGCCCTTCTCCAGTGAGGGCCTA | + |
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Preference number: 3 (lower is better) Translates to: SLLPHTGHLARL*SPGRPFSSEGL Trigger: TAGGCCCTCACTGGAGAAGGGCCTGCCTGGGCTGCACAGCCTTGCCAGGTGGCCTGTATGGGGGAGAAGTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| 3UTR GCA 72 bp | CTCCTCCATCACAGCATGCTCGCAGCTGGGCATGTTTaGAGCTGGGCCCCGGCAGGGTCCACCTCCATCACA | + |
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Preference number: 3 (lower is better) Translates to: LLHHSMLAAGHV*SWAPAGSTSIT Trigger: TGTGATGGAGGTGGACCCTGCCGGGGCCCAGCTGCAAACATGCCCAGCTGCGAGCATGCTGTGATGGAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR CCA 72 bp | CATCACAGCATGCTCGCAGCTGGGCATGTTTGCAGCTaGGCCCCGGCAGGGTCCACCTCCATCACAGCATGC | + |
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Preference number: 3 (lower is better) Translates to: HHSMLAAGHVCS*APAGSTSITAC Trigger: GCATGCTGTGATGGAGGTGGACCCTGCCGGGGCCCAGCTGCAAACATGCCCAGCTGCGAGCATGCTGTGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR-3UTR CAA 90 bp | ACTCTCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTCCCGGCTCCACCAGGCCCTaGAGCTCAGTGGACCGTCCA | + |
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Preference number: 3 (lower is better) Translates to: TLSGEALSEHPPTGLSLPGSTRP*SSVDRP Trigger: TGGACGGTCCACTGAGCTCAAGGGCCTGGTGGAGCC...GGGAAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGAGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| 3UTR-3UTR CAA 90 bp | TGCTCACAGCTGGGCATGTTTGCAGCTGGGCCCGGCAGGGTCCACCTCCATCACGGAAGGCCAGTCACTTaGCTCCTGCTGCAGCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: CSQLGMFAAGPGRVHLHHGRPVT*LLLQLL Trigger: CAAGAGCTGCAGCAGGAGCAAAGTGACTGGCCTTCC...GTGATGGAGGTGGACCCTGCCGGGCCCAGCTGCAAACATGCCCAGCTGTGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR GCA 72 bp | CACCTCCATCACAGCATGCTCACAGCTGGGCATGTTTaGAGCTGGGCCCGGCAGGGTCCACCTCCATCACAG | + |
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Preference number: 3 (lower is better) Translates to: HLHHSMLTAGHV*SWARQGPPPSQ Trigger: CTGTGATGGAGGTGGACCCTGCCGGGCCCAGCTGCAAACATGCCCAGCTGTGAGCATGCTGTGATGGAGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR TCA 72 bp | CACCCTTCTCCAGCAAGTTACGGGGCCCAGCCAGAGTaGGGTCAGTTTGCCGCCACGATGACAGCTGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: HPSPASYGAQPE*GQFAATMTAVL Trigger: CAGCACAGCTGTCATCGTGGCGGCAAACTGACCTCACTCTGGCTGGGCCCCGTAACTTGCTGGAGAAGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR CCA 72 bp | CATCACAGCATGCTCACAGCTGGGCATGTTTGCAGCTaGGCCCGGCAGGGTCCACCTCCATCACAGCATGCT | + |
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Preference number: 3 (lower is better) Translates to: HHSMLTAGHVCS*ARQGPPPSQHA Trigger: AGCATGCTGTGATGGAGGTGGACCCTGCCGGGCCCAGCTGCAAACATGCCCAGCTGTGAGCATGCTGTGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR-3UTR CAA 90 bp | CCTCCATCACAGCATGCTCGCAGCTGGGCATGTTTGCAGCTGGGCCCCGGCAGGCCACCACATTTCCTATaGTGCAAACCAGGCAAGGAT | + |
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Preference number: 3 (lower is better) Translates to: PPSQHARSWACLQLGPGRPPHFL*CKPGKD Trigger: ATCCTTGCCTGGTTTGCACAATAGGAAATGTGGTGG...CCTGCCGGGGCCCAGCTGCAAACATGCCCAGCTGCGAGCATGCTGTGATGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR TCA 72 bp | CAGAGAAGCCATGAGCACAACAGTCCACAGGGGACATaGAGGGGTCTAGAGGGCAGTGTCTCCTCCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: QRSHEHNSPQGT*RGLEGSVSSSS Trigger: GGAGGAGGAGGAGACACTGCCCTCTAGACCCCTTCATGTCCCCTGTGGACTGTTGTGCTCATGGCTTCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR CCA 72 bp | TCCAGTGAGGGCCTATGTCTCAGAGAGCTTCTCTCTTaGGCTACACCCTGCAGGCGCATGCCTTCTCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: SSEGLCLRELLS*ATPCRRMPSPV Trigger: CACAGGAGAAGGCATGCGCCTGCAGGGTGTAGCCCAAGAGAGAAGCTCTCTGAGACATAGGCCCTCACTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| 3UTR CCA 72 bp | CTTCTCCTGTGTAGCCGCTACCTCTTTTCCAAAGGATaGGGTGGGGAAGGCCAGTCACTTTGCTCCTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: LLLCSRYLFSKG*GGEGQSLCSCC Trigger: GCAGCAGGAGCAAAGTGACTGGCCTTCCCCACCCCATCCTTTGGAAAAGAGGTAGCGGCTACACAGGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| 3UTR GCA 72 bp | GAGAGCTTCTCTCTTGGGCTACACCCTGCAGGCGCATaGCTTCTCCTGTGTAGCCGCTACCTCTTTTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: ESFSLGLHPAGA*LLLCSRYLFSK Trigger: TTTGGAAAAGAGGTAGCGGCTACACAGGAGAAGGCATGCGCCTGCAGGGTGTAGCCCAAGAGAGAAGCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| 3UTR GCA 72 bp | CAGCTCACACCATGCTGCCCACCACATTTCCTATTGTaGAAACCAGGCAAGGATCCTGAGACAAAGGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: QLTPCCPPHFLL*KPGKDPETKAC Trigger: ACAGGCCTTTGTCTCAGGATCCTTGCCTGGTTTGCACAATAGGAAATGTGGTGGGCAGCATGGTGTGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR-3UTR CAA 90 bp | GATGAACACCACTCAGCACAGACATCTCAACATTTAATCACTTCTCCCCCATACCTCCTGCTGCAGCTCTaGAGACTCTCTCTGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: DEHHSAQTSQHLITSPPYLLLQL*RLSLER Trigger: CCTCTCCAGAGAGAGTCTCAAGAGCTGCAGCAGGAG...GTATGGGGGAGAAGTGATTAAATGTTGAGATGTCTGTGCTGAGTGGTGTTCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR TCA 72 bp | GAGGGTCATCACTACCTAGACACAGCAGGAGCCAGATaGACACCACTCAGCACAGACATCTCAACATTTAAT | + |
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Preference number: 3 (lower is better) Translates to: EGHHYLDTAGAR*TPLSTDISTFN Trigger: ATTAAATGTTGAGATGTCTGTGCTGAGTGGTGTTCATCTGGCTCCTGCTGTGTCTAGGTAGTGATGACCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR TCA 72 bp | CTGTTTCTGTACCTTTTAAAACCAGTAAATCCAGTGTaGAAAGTCAGAGAAGCCATGAGCACAACAGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: LFLYLLKPVNPV*KVREAMSTTVH Trigger: GTGGACTGTTGTGCTCATGGCTTCTCTGACTTTTCACACTGGATTTACTGGTTTTAAAAGGTACAGAAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR-3UTR CAA 90 bp | AATCCTAGAGCAATAATCCTGGTTAAAATGTCCACTAGAGTCCTCAGAGAAGTAGAGTGGTCACTGGGCTaGAAGGATATAAGGAATAGA | + |
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Preference number: 3 (lower is better) Translates to: NPRAIILVKMSTRVLREVEWSLG*KDIRNR Trigger: TCTATTCCTTATATCCTTCAAGCCCAGTGACCACTC...TACTTCTCTGAGGACTCTAGTGGACATTTTAACCAGGATTATTGCTCTAGGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS-3UTR GCA 90 bp | CTCCCCAGCATTTACACCAAGCCTGCCCACCCGTGTGTGGCAGGGCCTGGCTGGGGCTACAGGGTGCTCTaGAGTGCTGGCAGCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LPSIYTKPAHPCVAGPGWGYRVL*SAGSSG Trigger: GCCTGAGCTGCCAGCACTGCAGAGCACCCTGTAGCC...CCAGCCAGGCCCTGCCACACACGGGTGGGCAGGCTTGGTGTAAATGCTGGGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR GCA 90 bp | AGGCCCTCCCCAGCATTTACACCAAGCCTGCCCACCCGTGTGTGGCAGGGCCTGTCCTGCTCAGTGTGGTaGTCCTTCTCGCTGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RPSPAFTPSLPTRVWQGLSCSVW*SFSLRR Trigger: CCGCCTCAGCGAGAAGGAGCACCACACTGAGCAGGA...CAGGCCCTGCCACACACGGGTGGGCAGGCTTGGTGTAAATGCTGGGGAGGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR GCA 90 bp | CCTCCATCACAGCATGCTCGCAGCTGGGCATGTTTGCAGCTGGGCCCCGGCAGGCACGTGGCTACAGGGTaGTCTGCAGTGCTGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PPSQHARSWACLQLGPGRHVATG*SAVLAA Trigger: AGCTGCCAGCACTGCAGAGCACCCTGTAGCCACGTG...CCTGCCGGGGCCCAGCTGCAAACATGCCCAGCTGCGAGCATGCTGTGATGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS-3UTR CCA 90 bp | CCTCCATCACAGCATGCTCGCAGCTGGGCATGTTTGCAGCTGGGCCCCGGCAGGGGTGCTCTGCAGTGCTaGCAGCTCAGGCTCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: PPSQHARSWACLQLGPGRGALQC*QLRLLL Trigger: CAAAAGGAGCCTGAGCTGCCAGCACTGCAGAGCACC...CCTGCCGGGGCCCAGCTGCAAACATGCCCAGCTGCGAGCATGCTGTGATGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS-3UTR CCA 90 bp | AGGCTGAGGCCCTCCCCAGCATTTACACCAAGCCTGCCCACCCGTGTGTGGCAGGCCTCAATCTTGTCCTaGTCTAGCCGGTGCTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: RLRPSPAFTPSLPTRVWQASILS*SSRCCR Trigger: CCGGCAGCACCGGCTAGACCAGGACAAGATTGAGGC...CTGCCACACACGGGTGGGCAGGCTTGGTGTAAATGCTGGGGAGGGCCTCAGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR GCA 90 bp | GCTGGGCATGTTTGCAGCTGGGCCCCGGCAGGGTCCACCTCCATCACAGCATGCGACCAGGCCTTTACATaGAGGACACTCCGTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: AGHVCSWAPAGSTSITACDQAFT*RTLRQQ Trigger: CTGCTGACGGAGTGTCCTGCATGTAAAGGCCTGGTC...GCATGCTGTGATGGAGGTGGACCCTGCCGGGGCCCAGCTGCAAACATGCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS-3UTR CCA 90 bp | CTCCCCAGCATTTACACCAAGCCTGCCCACCCGTGTGTGGCAGGGCCTGGCTGGATTGGGACAGACAGCTaGCAGGCTCTCCACCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSIYTKPAHPCVAGPGWIGTDS*QALHLS Trigger: AGAGAGGTGGAGAGCCTGCCAGCTGTCTGTCCCAAT...CCAGCCAGGCCCTGCCACACACGGGTGGGCAGGCTTGGTGTAAATGCTGGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCATCACAGCATGCTCGCAGCTGGGCATGTTTGCAGCTGGGCCCCGGCAGGGAACAGCCAACGGTGTaGAATCTGCAGAGAACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSQHARSWACLQLGPGREQPTV*NLQRTR Trigger: CCGGGTTCTCTGCAGATTCCACACCGTTGGCTGTTC...CCTGCCGGGGCCCAGCTGCAAACATGCCCAGCTGCGAGCATGCTGTGATGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
||
| CDS-3UTR TCA 90 bp | AGGCCCTCCCCAGCATTTACACCAAGCCTGCCCACCCGTGTGTGGCAGGGCCTGAGTCTCCACCATCTCTaGACAGCCAACGGTGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RPSPAFTPSLPTRVWQGLSLHHL*TANGVE Trigger: TTCCACACCGTTGGCTGTTCAGAGATGGTGGAGACT...CAGGCCCTGCCACACACGGGTGGGCAGGCTTGGTGTAAATGCTGGGGAGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR TCA 90 bp | AGTGAGGGCCTATGTCTCAGAGAGCTTCTCTCTTGGGCTACACCCTGCAGGCGCCCATGGCCAGGTCCTTaGGGCCGATGCTCCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEGLCLRELLSWATPCRRPWPGP*GRCSSP Trigger: TGGAGAGGAGCATCGGCCTCAAGGACCTGGCCATGG...GCGCCTGCAGGGTGTAGCCCAAGAGAGAAGCTCTCTGAGACATAGGCCCTCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR TCA 90 bp | ACTCTCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTCCCCCATGGCCAGGTCCTTaGGGCCGATGCTCCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLSGEALSEHPPTGLSLPPWPGP*GRCSSP Trigger: TGGAGAGGAGCATCGGCCTCAAGGACCTGGCCATGG...GGGAAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGAGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTGAGGCCCTCCCCAGCATTTACACCAAGCCTGCCCACCCGTGTGTGGCAGCTCCTCTCCAGCTGTTaGACCTTGTTACTCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLRPSPAFTPSLPTRVWQLLSSC*TLLLRA Trigger: GGCCCTGAGTAACAAGGTGCAACAGCTGGAGAGGAG...CTGCCACACACGGGTGGGCAGGCTTGGTGTAAATGCTGGGGAGGGCCTCAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR TCA 90 bp | GCCTATGTCTCAGAGAGCTTCTCTCTTGGGCTACACCCTGCAGGCGCATGCCTTGGTGCTCCTTCTCGCTaGGGCGGACCAGGCCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: AYVSESFSLGLHPAGACLGAPSR*GGPGLY Trigger: GTAAAGGCCTGGTCCGCCTCAGCGAGAAGGAGCACC...AAGGCATGCGCCTGCAGGGTGTAGCCCAAGAGAGAAGCTCTCTGAGACATAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR TCA 90 bp | AGGCCCTCCCCAGCATTTACACCAAGCCTGCCCACCCGTGTGTGGCAGGGCCTGCAGAGATCTTCCAGATaGAGACCCCATCATAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPSPAFTPSLPTRVWQGLQRSSR*RPHHRW Trigger: CCACCTATGATGGGGTCTTCATCTGGAAGATCTCTG...CAGGCCCTGCCACACACGGGTGGGCAGGCTTGGTGTAAATGCTGGGGAGGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCCAGCATTTACACCAAGCCTGCCCACCCGTGTGTGGCAGGGCCTGGCTGGCCTGACGCTTTCTGGTaGAGTCAGAGATCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSIYTKPAHPCVAGPGWPDAFW*SQRSSR Trigger: TCTGGAAGATCTCTGACTTCACCAGAAAGCGTCAGG...CCAGCCAGGCCCTGCCACACACGGGTGGGCAGGCTTGGTGTAAATGCTGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTCCCCAGGGCTCTCCACCTCTCTaGGGGCAGCGTTATCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSGEALSEHPPTGLSLPQGSPPL*GQRYLE Trigger: TTCCAGATAACGCTGCCCGCAGAGAGGTGGAGAGCC...CTGGGGAAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR GCA 90 bp | CGGCAGGGTCCACCTCCATCACAGCATGCTCACAGCTGGGCATGTTTGCAGCTGCCGGCTACAAGCCTCTaGAGTCACTGCTACCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQGPPPSQHAHSWACLQLPATSL*SHCYPL Trigger: GAGAGGGTAGCAGTGACTGCAGAGGCTTGTAGCCGG...CAGCTGCAAACATGCCCAGCTGTGAGCATGCTGTGATGGAGGTGGACCCTGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
||
| CDS-3UTR CCA 90 bp | ACTCTCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTCCCCAGGCAGCACAGTTCTaGGGCCCAGAGCTGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TLSGEALSEHPPTGLSLPQAAQF*GPELRM Trigger: CATCCTCAGCTCTGGGCCCCAGAACTGTGCTGCCTG...GGGAAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
||
| CDS-3UTR CCA 90 bp | GGCTCTAGGCTGAGGCCCTCCCCAGCATTTACACCAAGCCTGCCCACCCGTGTGAAGTGCATCCATCATTaGGACAGACAGCTGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSRLRPSPAFTPSLPTRVKCIHH*DRQLAG Trigger: GCCTGCCAGCTGTCTGTCCCAATGATGGATGCACTT...CACACGGGTGGGCAGGCTTGGTGTAAATGCTGGGGAGGGCCTCAGCCTAGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGAGGCCCTCCCCAGCATTTACACCAAGCCTGCCCACCCGTGTGTGGCAGAGCTCAGGCTCCTTTTaGGGCATTCCTGCTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLRPSPAFTPSLPTRVWQSSGSF*GIPAQC Trigger: ACACTGAGCAGGAATGCCCCAAAAGGAGCCTGAGCT...CTGCCACACACGGGTGGGCAGGCTTGGTGTAAATGCTGGGGAGGGCCTCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCCTCCCCAGCATTTACACCAAGCCTGCCCACCCGTGTGTGGCAGGGCCTGGCAACAGAGCATCATTaGGGCCTTTCATCACCACGA | + |
|
Preference number: 4 (lower is better) Translates to: RPSPAFTPSLPTRVWQGLATEHH*GLSSPR Trigger: TCGTGGTGATGAAAGGCCCCAATGATGCTCTGTTGC...CAGGCCCTGCCACACACGGGTGGGCAGGCTTGGTGTAAATGCTGGGGAGGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR TCA 90 bp | AGGCTGAGGCCCTCCCCAGCATTTACACCAAGCCTGCCCACCCGTGTGTGGCAGCCTGACGCTTTCTGGTaGAGTCAGAGATCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLRPSPAFTPSLPTRVWQPDAFW*SQRSSR Trigger: TCTGGAAGATCTCTGACTTCACCAGAAAGCGTCAGG...CTGCCACACACGGGTGGGCAGGCTTGGTGTAAATGCTGGGGAGGGCCTCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGGCCCCGGCAGGGTCCACCTCCATCACAGCATGCTCACAGCTGGGCATGTTCCGCAGGATGTTTTTaGAGGCTGAACAGAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: AGPRQGPPPSQHAHSWACSAGCF*RLNRGT Trigger: AGTACCTCTGTTCAGCCTGCAAAAACATCCTGCGGA...ACATGCCCAGCTGTGAGCATGCTGTGATGGAGGTGGACCCTGCCGGGGCCCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
||
| CDS-3UTR GCA 90 bp | CTCCCCAGCATTTACACCAAGCCTGCCCACCCGTGTGTGGCAGGGCCTGGCTGGGAGGGATCTTCTTCTTaGCACAGCCATCACAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPSIYTKPAHPCVAGPGWEGSSS*HSHHRL Trigger: TAACCTGTGATGGCTGTGGCAAGAAGAAGATCCCTC...CCAGCCAGGCCCTGCCACACACGGGTGGGCAGGCTTGGTGTAAATGCTGGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCCAGCATTTACACCAAGCCTGCCCACCCGTGTGTGGCAGGGCCTGGCTGGAAGGTTGCTATCTTCTaGTCCAAAATCTGGCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSIYTKPAHPCVAGPGWKVAIF*SKIWHR Trigger: GCGGTGCCAGATTTTGGAGCAGAAGATAGCAACCTT...CCAGCCAGGCCCTGCCACACACGGGTGGGCAGGCTTGGTGTAAATGCTGGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGGCCTATGTCTCAGAGAGCTTCTCTCTTGGGCTACACCCTGCAGGCGCCCGGCTACAAGCCTCTaGAGTCACTGCTACCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SEGLCLRELLSWATPCRRPATSL*SHCYPL Trigger: GAGAGGGTAGCAGTGACTGCAGAGGCTTGTAGCCGG...GCGCCTGCAGGGTGTAGCCCAAGAGAGAAGCTCTCTGAGACATAGGCCCTCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR GCA 90 bp | CGGCAGGGTCCACCTCCATCACAGCATGCTCACAGCTGGGCATGTTTGCAGCTGTACATCGGGCCTGAATaGGTCGATCACATGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RQGPPPSQHAHSWACLQLYIGPE*VDHMLP Trigger: CGGGAGCATGTGATCGACGCATTCAGGCCCGATGTA...CAGCTGCAAACATGCCCAGCTGTGAGCATGCTGTGATGGAGGTGGACCCTGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
||
| CDS-3UTR CCA 90 bp | CTCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTCCCCAGATTGGGACAGACAGCTaGCAGGCTCTCCACCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGEALSEHPPTGLSLPQIGTDS*QALHLS Trigger: AGAGAGGTGGAGAGCCTGCCAGCTGTCTGTCCCAAT...CTGGGGAAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTCCCGGTGCTCTGCAGTGCTaGCAGCTCAGGCTCCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLSGEALSEHPPTGLSLPGALQC*QLRLLL Trigger: CAAAAGGAGCCTGAGCTGCCAGCACTGCAGAGCACC...GGGAAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGAGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR TCA 90 bp | GCCTATGTCTCAGAGAGCTTCTCTCTTGGGCTACACCCTGCAGGCGCATGCCTTAGCCGCTGCAGCTCATaGTCCTGCAGGTTCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AYVSESFSLGLHPAGACLSRCSS*SCRFSV Trigger: GACTGAGAACCTGCAGGATCATGAGCTGCAGCGGCT...AAGGCATGCGCCTGCAGGGTGTAGCCCAAGAGAGAAGCTCTCTGAGACATAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTGAGGCCCTCCCCAGCATTTACACCAAGCCTGCCCACCCGTGTGTGGCAGTCCGCAGGATGTTTTTaGAGGCTGAACAGAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RLRPSPAFTPSLPTRVWQSAGCF*RLNRGT Trigger: AGTACCTCTGTTCAGCCTGCAAAAACATCCTGCGGA...CTGCCACACACGGGTGGGCAGGCTTGGTGTAAATGCTGGGGAGGGCCTCAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR GCA 90 bp | GAGACTCTCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTGGCTCTCCACCTCTCTaGGGGCAGCGTTATCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETLSGEALSEHPPTGLSLGSPPL*GQRYLE Trigger: TTCCAGATAACGCTGCCCGCAGAGAGGTGGAGAGCC...AAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGAGAGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTCCCGTTCCTGGAGAGGCTTaGGCCTCCAAGAATGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLSGEALSEHPPTGLSLPVPGEA*ASKNEL Trigger: GAGCTCATTCTTGGAGGCCCAAGCCTCTCCAGGAAC...GGGAAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTCCCCAGATCTTGGCCTCCATCTTaGACACAGGGCAGAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLERPFLSTHLQVSPFPRSWPPS*TQGRRG Trigger: CCCTCTTCTGCCCTGTGTCCAAGATGGAGGCCAAGA...TCTGGGGAAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTGCCTTTCTGTGTGATGGTGATTGGCTCTAGGCTGAGGCCCTCCCCAGCAGACCAGGCCTTTACATaGAGGACACTCCGTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLPFCVMVIGSRLRPSPADQAFT*RTLRQQ Trigger: CTGCTGACGGAGTGTCCTGCATGTAAAGGCCTGGTC...TGCTGGGGAGGGCCTCAGCCTAGAGCCAATCACCATCACACAGAAAGGCAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAAAGAAACAAGATGCACCCTTCTCCAGCAAGTTACGGGGCCCAGCCAGAGTCCTGCTCAGTGTGGTaGTCCTTCTCGCTGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RERNKMHPSPASYGAQPESCSVW*SFSLRR Trigger: CCGCCTCAGCGAGAAGGAGCACCACACTGAGCAGGA...CTCTGGCTGGGCCCCGTAACTTGCTGGAGAAGGGTGCATCTTGTTTCTTTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
||
| CDS-3UTR GCA 90 bp | CTGAGACAAAGGCCTGTACATTGGCCAGGTCAAGGTCAGACCTTCATCTCTACCGGCTACAGGGTGCTCTaGAGTGCTGGCAGCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRQRPVHWPGQGQTFISTGYRVL*SAGSSG Trigger: GCCTGAGCTGCCAGCACTGCAGAGCACCCTGTAGCC...GGTAGAGATGAAGGTCTGACCTTGACCTGGCCAATGTACAGGCCTTTGTCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
||
| CDS-3UTR GCA 90 bp | CCAACTGGAGGCTTCTTCCTGCCTTTCTGTGTGATGGTGATTGGCTCTAGGCTGCACGTGGCTACAGGGTaGTCTGCAGTGCTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTGGFFLPFCVMVIGSRLHVATG*SAVLAA Trigger: AGCTGCCAGCACTGCAGAGCACCCTGTAGCCACGTG...CAGCCTAGAGCCAATCACCATCACACAGAAAGGCAGGAAGAAGCCTCCAGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGCCCTTCTCCAGTGAGGGCCTATGTCTCAGAGAGCTTCTCTCTTGGGCTACTCCTCTCCAGCTGTTaGACCTTGTTACTCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGPSPVRAYVSESFSLGLLLSSC*TLLLRA Trigger: GGCCCTGAGTAACAAGGTGCAACAGCTGGAGAGGAG...TAGCCCAAGAGAGAAGCTCTCTGAGACATAGGCCCTCACTGGAGAAGGGCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGACAGCAGGAGCTTTCCTATTGGAAAGCTGAGAAGCTCCCCAGCGGGCTACATCGGGCCTGAATaGGTCGATCACATGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RGDSRSFPIGKLRSSPAGYIGPE*VDHMLP Trigger: CGGGAGCATGTGATCGACGCATTCAGGCCCGATGTA...GCCCGCTGGGGAGCTTCTCAGCTTTCCAATAGGAAAGCTCCTGCTGTCTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR CCA 90 bp | TATTGGAAAGCTGAGAAGCTCCCCAGCGGGCTCCACCAGGCCCTTGAGCTCAGTAGCTCAGGCTCCTTTTaGGGCATTCCTGCTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YWKAEKLPSGLHQALELSSSGSF*GIPAQC Trigger: ACACTGAGCAGGAATGCCCCAAAAGGAGCCTGAGCT...ACTGAGCTCAAGGGCCTGGTGGAGCCCGCTGGGGAGCTTCTCAGCTTTCCAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGAGGCCCTCCCCAGCATTTACACCAAGCCTGCCCACCCGTGTGTGGCAGAGGTTAAGGGAAACTTaGGGCAGACCTCATAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RLRPSPAFTPSLPTRVWQRLRET*GRPHSV Trigger: TACACTATGAGGTCTGCCCCAAGTTTCCCTTAACCT...CTGCCACACACGGGTGGGCAGGCTTGGTGTAAATGCTGGGGAGGGCCTCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCCTTTCTGTGTGATGGTGATTGGCTCTAGGCTGAGGCCCTCCCCAGCATCTTGGCCTCCATCTTaGACACAGGGCAGAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLPFCVMVIGSRLRPSPASWPPS*TQGRRG Trigger: CCCTCTTCTGCCCTGTGTCCAAGATGGAGGCCAAGA...TGCTGGGGAGGGCCTCAGCCTAGAGCCAATCACCATCACACAGAAAGGCAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR TCA 90 bp | CCAACTGGAGGCTTCTTCCTGCCTTTCTGTGTGATGGTGATTGGCTCTAGGCTGAGCCGCTGCAGCTCATaGTCCTGCAGGTTCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTGGFFLPFCVMVIGSRLSRCSS*SCRFSV Trigger: GACTGAGAACCTGCAGGATCATGAGCTGCAGCGGCT...CAGCCTAGAGCCAATCACCATCACACAGAAAGGCAGGAAGAAGCCTCCAGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR GCA 90 bp | GAGACTCTCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTGCTGGAGAGAATGGATaGACACCTGAGGATGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETLSGEALSEHPPTGLSLAGENG*TPEDAG Trigger: ACCAGCATCCTCAGGTGTGCATCCATTCTCTCCAGC...AAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGAGAGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114234.2 |
||
| CDS-3UTR CCA 90 bp | CCAACTGGAGGCTTCTTCCTGCCTTTCTGTGTGATGGTGATTGGCTCTAGGCTGTCTGGGGCCCAGAGCTaGAGAGAATGGATGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: PTGGFFLPFCVMVIGSRLSGAQS*REWMHT Trigger: GGTGTGCATCCATTCTCTCCAGCTCTGGGCCCCAGA...CAGCCTAGAGCCAATCACCATCACACAGAAAGGCAGGAAGAAGCCTCCAGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114234.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTCCCCAGAGATGTTTTTGCAGGCTaGACAGAGGTACTTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLERPFLSTHLQVSPFPRDVFAG*TEVLGF Trigger: GAAGCCAAGTACCTCTGTTCAGCCTGCAAAAACATC...TCTGGGGAAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR TCA 90 bp | TATTGGAAAGCTGAGAAGCTCCCCAGCGGGCTCCACCAGGCCCTTGAGCTCAGTGATGTTTTTGCAGGCTaGACAGAGGTACTTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YWKAEKLPSGLHQALELSDVFAG*TEVLGF Trigger: GAAGCCAAGTACCTCTGTTCAGCCTGCAAAAACATC...ACTGAGCTCAAGGGCCTGGTGGAGCCCGCTGGGGAGCTTCTCAGCTTTCCAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTCCCGAGGGATCTTCTTCTTaGCACAGCCATCACAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TLSGEALSEHPPTGLSLPEGSSS*HSHHRL Trigger: TAACCTGTGATGGCTGTGGCAAGAAGAAGATCCCTC...GGGAAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR GCA 90 bp | TATTGGAAAGCTGAGAAGCTCCCCAGCGGGCTCCACCAGGCCCTTGAGCTCAGTAAGGTTGCTATCTTCTaGTCCAAAATCTGGCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: YWKAEKLPSGLHQALELSKVAIF*SKIWHR Trigger: GCGGTGCCAGATTTTGGAGCAGAAGATAGCAACCTT...ACTGAGCTCAAGGGCCTGGTGGAGCCCGCTGGGGAGCTTCTCAGCTTTCCAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR CCA 90 bp | CCAACTGGAGGCTTCTTCCTGCCTTTCTGTGTGATGGTGATTGGCTCTAGGCTGGAACAGCCAACGGTGTaGAATCTGCAGAGAACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PTGGFFLPFCVMVIGSRLEQPTV*NLQRTR Trigger: CCGGGTTCTCTGCAGATTCCACACCGTTGGCTGTTC...CAGCCTAGAGCCAATCACCATCACACAGAAAGGCAGGAAGAAGCCTCCAGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR CCA 90 bp | GCAGGCCCTTCTCCAGTGAGGGCCTATGTCTCAGAGAGCTTCTCTCTTGGGCTAGCAACAGAGCATCATTaGGGCCTTTCATCACCACGA | + |
|
Preference number: 4 (lower is better) Translates to: AGPSPVRAYVSESFSLGLATEHH*GLSSPR Trigger: TCGTGGTGATGAAAGGCCCCAATGATGCTCTGTTGC...TAGCCCAAGAGAGAAGCTCTCTGAGACATAGGCCCTCACTGGAGAAGGGCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR TCA 90 bp | CCAGGCAAGGATCCTGAGACAAAGGCCTGTACATTGGCCAGGTCAAGGTCAGACCAGAGATCTTCCAGATaGAGACCCCATCATAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGKDPETKACTLARSRSDQRSSR*RPHHRW Trigger: CCACCTATGATGGGGTCTTCATCTGGAAGATCTCTG...GTCTGACCTTGACCTGGCCAATGTACAGGCCTTTGTCTCAGGATCCTTGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| 3UTR CAA 72 bp | TCACAGCTCACACCATGCTGCCCACCACATTTCCTATaGTGCAAACCAGGCAAGGATCCTGAGACAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQLTPCCPPHFL*CKPGKDPETKA Trigger: GGCCTTTGTCTCAGGATCCTTGCCTGGTTTGCACAATAGGAAATGTGGTGGGCAGCATGGTGTGAGCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS-3UTR GCA 90 bp | GGACAGAGAGAAAGAAACAAGATGCACCCTTCTCCAGCAAGTTACGGGGCCCAGAGGTCCCCTTCCAAGTaGATCCATCATTGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GQRERNKMHPSPASYGAQRSPSK*IHHWDR Trigger: TCTGTCCCAATGATGGATGCACTTGGAAGGGGACCT...CTGGGCCCCGTAACTTGCTGGAGAAGGGTGCATCTTGTTTCTTTCTCTCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS-3UTR CCA 90 bp | CCAACTGGAGGCTTCTTCCTGCCTTTCTGTGTGATGGTGATTGGCTCTAGGCTGCTGAACAGAGGTACTTaGCTTCTAACCTGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTGGFFLPFCVMVIGSRLLNRGT*LLTWSP Trigger: TGGGGACCAGGTTAGAAGCCAAGTACCTCTGTTCAG...CAGCCTAGAGCCAATCACCATCACACAGAAAGGCAGGAAGAAGCCTCCAGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR CCA 90 bp | CAGTTTGCCGCCACGATGACAGCTGTGCTGTTTCTGTACCTTTTAAAACCAGTAGCCTCAATCTTGTCCTaGTCTAGCCGGTGCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QFAATMTAVLFLYLLKPVASILS*SSRCCR Trigger: CCGGCAGCACCGGCTAGACCAGGACAAGATTGAGGC...TACTGGTTTTAAAAGGTACAGAAACAGCACAGCTGTCATCGTGGCGGCAAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS-3UTR TCA 90 bp | AAGTTACGGGGCCCAGCCAGAGTGAGGTCAGTTTGCCGCCACGATGACAGCTGTATCAATGTTACCTTCTaGTTAAAAGGCCACTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KLRGPARVRSVCRHDDSCINVTF*LKGHCN Trigger: GTTGCAGTGGCCTTTTAATCAGAAGGTAACATTGAT...ACAGCTGTCATCGTGGCGGCAAACTGACCTCACTCTGGCTGGGCCCCGTAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS-3UTR TCA 90 bp | GAGACTCTCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTATCAATGTTACCTTCTaGTTAAAAGGCCACTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ETLSGEALSEHPPTGLSLINVTF*LKGHCN Trigger: GTTGCAGTGGCCTTTTAATCAGAAGGTAACATTGAT...AAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGAGAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR CCA 90 bp | AGAGAAAGAAACAAGATGCACCCTTCTCCAGCAAGTTACGGGGCCCAGCCAGAGAGGTTAAGGGAAACTTaGGGCAGACCTCATAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RERNKMHPSPASYGAQPERLRET*GRPHSV Trigger: TACACTATGAGGTCTGCCCCAAGTTTCCCTTAACCT...CTCTGGCTGGGCCCCGTAACTTGCTGGAGAAGGGTGCATCTTGTTTCTTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS-3UTR TCA 90 bp | TTTAAAACCAGTAAATCCAGTGTGAAAAGTCAGAGAAGCCATGAGCACAACAGTGGTGCTCCTTCTCGCTaGGGCGGACCAGGCCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FKTSKSSVKSQRSHEHNSGAPSR*GGPGLY Trigger: GTAAAGGCCTGGTCCGCCTCAGCGAGAAGGAGCACC...ACTGTTGTGCTCATGGCTTCTCTGACTTTTCACACTGGATTTACTGGTTTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS-3UTR CCA 90 bp | GATGAACACCACTCAGCACAGACATCTCAACATTTAATCACTTCTCCCCCATACGTTCCTGGAGAGGCTTaGGCCTCCAAGAATGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DEHHSAQTSQHLITSPPYVPGEA*ASKNEL Trigger: GAGCTCATTCTTGGAGGCCCAAGCCTCTCCAGGAAC...GTATGGGGGAGAAGTGATTAAATGTTGAGATGTCTGTGCTGAGTGGTGTTCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS-3UTR CCA 90 bp | CAGTTTGCCGCCACGATGACAGCTGTGCTGTTTCTGTACCTTTTAAAACCAGTACTGAACAGAGGTACTTaGCTTCTAACCTGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QFAATMTAVLFLYLLKPVLNRGT*LLTWSP Trigger: TGGGGACCAGGTTAGAAGCCAAGTACCTCTGTTCAG...TACTGGTTTTAAAAGGTACAGAAACAGCACAGCTGTCATCGTGGCGGCAAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
||
| CDS-3UTR CCA 90 bp | GATGAACACCACTCAGCACAGACATCTCAACATTTAATCACTTCTCCCCCATACAAGTGCATCCATCATTaGGACAGACAGCTGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DEHHSAQTSQHLITSPPYKCIHH*DRQLAG Trigger: GCCTGCCAGCTGTCTGTCCCAATGATGGATGCACTT...GTATGGGGGAGAAGTGATTAAATGTTGAGATGTCTGTGCTGAGTGGTGTTCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS-3UTR CAA 90 bp | GCTGGGCCCCGGCAGGGTCCACCTCCATCACAGCATGCTCACAGCTGGGCATGTGCTCCTCTCCAGCTGTaGCACCTTGTTACTCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AGPRQGPPPSQHAHSWACAPLQL*HLVTQG Trigger: GCCCTGAGTAACAAGGTGCAACAGCTGGAGAGGAGC...ACATGCCCAGCTGTGAGCATGCTGTGATGGAGGTGGACCCTGCCGGGGCCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS-3UTR CAA 90 bp | ACTCTCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTCCCGCCATGGCCAGGTCCTaGAGGCCGATGCTCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLSGEALSEHPPTGLSLPAMARS*RPMLLS Trigger: GGAGAGGAGCATCGGCCTCAAGGACCTGGCCATGGC...GGGAAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGAGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR CAA 90 bp | TATTGGAAAGCTGAGAAGCTCCCCAGCGGGCTCCACCAGGCCCTTGAGCTCAGTGTCCCCAGGAGGGTCTaGGAGAAGCCAGGCTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: YWKAEKLPSGLHQALELSVPRRV*EKPGCS Trigger: GCTACAGCCTGGCTTCTCCAAGACCCTCCTGGGGAC...ACTGAGCTCAAGGGCCTGGTGGAGCCCGCTGGGGAGCTTCTCAGCTTTCCAATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR CAA 90 bp | GAGACTCTCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTGCCATGGCCAGGTCCTaGAGGCCGATGCTCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ETLSGEALSEHPPTGLSLAMARS*RPMLLS Trigger: GGAGAGGAGCATCGGCCTCAAGGACCTGGCCATGGC...AAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGAGAGTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS TCA 90 bp | GGCTCCTTTTGGGGCATTCCTGCTCAGTGTGGTGCTCCTTCTCGCTaGGGCGGACCAGGCCTTTACATGCAGGACACTCCGTCAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSFWGIPAQCGAPSR*GGPGLYMQDTPSAG Trigger: TCCTGCTGACGGAGTGTCCTGCATGTAAAGGCCTGGTCCGCCTCAGCGAGAAGGAGCACCACACTGAGCAGGAATGCCCCAAAAGGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS TCA 90 bp | CAGCACAGTTCTGGGGCCCAGAGCTGGAGAGAATGGATGCACACCTaGGGATGCTGGTCAGGCAGAAGGAGCAGTAGCGGTGCCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: QHSSGAQSWREWMHT*GCWSGRRSSSGAHT Trigger: AGTGTGGGCACCGCTACTGCTCCTTCTGCCTGACCAGCATCCTCAGGTGTGCATCCATTCTCTCCAGCTCTGGGCCCCAGAACTGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114234.2 |
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| CDS GCA 90 bp | TGCTGGCAGCTCAGGCTCCTTTTGGGGCATTCCTGCTCAGTGTGGTaGTCCTTCTCGCTGAGGCGGACCAGGCCTTTACATGCAGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: CWQLRLLLGHSCSVW*SFSLRRTRPLHAGH Trigger: GTGTCCTGCATGTAAAGGCCTGGTCCGCCTCAGCGAGAAGGAGCACCACACTGAGCAGGAATGCCCCAAAAGGAGCCTGAGCTGCCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 90 bp | CAGTGCTGGCAGCTCAGGCTCCTTTTGGGGCATTCCTGCTCAGTGTaGTGCTCCTTCTCGCTGAGGCGGACCAGGCCTTTACATGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QCWQLRLLLGHSCSV*CSFSLRRTRPLHAG Trigger: TCCTGCATGTAAAGGCCTGGTCCGCCTCAGCGAGAAGGAGCACCACACTGAGCAGGAATGCCCCAAAAGGAGCCTGAGCTGCCAGCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR CAA 90 bp | GAGACTCTCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTGTCCCCAGGAGGGTCTaGGAGAAGCCAGGCTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: ETLSGEALSEHPPTGLSLVPRRV*EKPGCS Trigger: GCTACAGCCTGGCTTCTCCAAGACCCTCCTGGGGAC...AAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGAGAGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 90 bp | AGCGGTGCCCACACTGGGCCTGGAAAGGCCTCCGCAGGATGTTTTTaGAGGCTGAACAGAGGTACTTGGCTTCTAACCTGGTCCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SGAHTGPGKASAGCF*RLNRGTWLLTWSPG Trigger: TCCTGGGGACCAGGTTAGAAGCCAAGTACCTCTGTTCAGCCTGCAAAAACATCCTGCGGAGGCCTTTCCAGGCCCAGTGTGGGCACCGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 90 bp | CTCAGTGTGGTGCTCCTTCTCGCTGAGGCGGACCAGGCCTTTACATaGAGGACACTCCGTCAGCAGGAATGGGCAAAGTCCTTCGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSVVLLLAEADQAFT*RTLRQQEWAKSFVA Trigger: TGCCACGAAGGACTTTGCCCATTCCTGCTGACGGAGTGTCCTGCATGTAAAGGCCTGGTCCGCCTCAGCGAGAAGGAGCACCACACTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGGGCCTATGTCTCAGAGAGCTTCTCTCTTGGGCTACACCCTGCAGGCGCGCTCCTCTCCAGCTGTaGCACCTTGTTACTCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SEGLCLRELLSWATPCRRAPLQL*HLVTQG Trigger: GCCCTGAGTAACAAGGTGCAACAGCTGGAGAGGAGC...GCGCCTGCAGGGTGTAGCCCAAGAGAGAAGCTCTCTGAGACATAGGCCCTCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS TCA 90 bp | GAGCTCAGCAGTAGGGCTAGGTGTTCCCGTAGCCGCTGCAGCTCATaGTCCTGCAGGTTCTCAGTCTCCACCATCTCTGAACAGCCAACG | + |
|
Preference number: 5 (lower is better) Translates to: ELSSRARCSRSRCSS*SCRFSVSTISEQPT Trigger: CGTTGGCTGTTCAGAGATGGTGGAGACTGAGAACCTGCAGGATCATGAGCTGCAGCGGCTACGGGAACACCTAGCCCTACTGCTGAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 90 bp | TTCTGCTCCAAAATCTGGCACCGCTGGAGTAGCTCTGGCCCCACCTaGTTCAAGGTTCCTGGAGAGGCTTGGGCCTCCAAGAATGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FCSKIWHRWSSSGPT*FKVPGEAWASKNEL Trigger: GAGCTCATTCTTGGAGGCCCAAGCCTCTCCAGGAACCTTGAACCAGGTGGGGCCAGAGCTACTCCAGCGGTGCCAGATTTTGGAGCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 90 bp | AAGAGGGGGCAGCCACTGGCGATGTTCATGTCACTGACAGGCCTCTaGAAGGAGGACGAGGTTACATCGGGCCTGAATGCGTCGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: KRGQPLAMFMSLTGL*KEDEVTSGLNASIT Trigger: TGTGATCGACGCATTCAGGCCCGATGTAACCTCGTCCTCCTTCCAGAGGCCTGTCAGTGACATGAACATCGCCAGTGGCTGCCCCCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGGGCCTATGTCTCAGAGAGCTTCTCTCTTGGGCTACACCCTGCAGGCGCTTCTTGGCCTCCATCTaGGACACAGGGCAGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SEGLCLRELLSWATPCRRFLASI*DTGQKR Trigger: CCTCTTCTGCCCTGTGTCCAAGATGGAGGCCAAGAA...GCGCCTGCAGGGTGTAGCCCAAGAGAGAAGCTCTCTGAGACATAGGCCCTCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 90 bp | TGCACCTTGTTACTCAGGGCCTCAATCTTGTCCTGGTCTAGCCGGTaGTGCCGGCTACAAGCCTCTGCAGTCACTGCTACCCTCTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: CTLLLRASILSWSSR*CRLQASAVTATLST Trigger: AGTAGAGAGGGTAGCAGTGACTGCAGAGGCTTGTAGCCGGCAGCACCGGCTAGACCAGGACAAGATTGAGGCCCTGAGTAACAAGGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 90 bp | CTGAACAGAGGTACTTGGCTTCTAACCTGGTCCCCAGGAGGGTCTTaGAGAAGCCAGGCTGTAGCAGTTCTAGGGAGCCAGGGGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LNRGTWLLTWSPGGS*RSQAVAVLGSQGKS Trigger: TGACTTCCCCTGGCTCCCTAGAACTGCTACAGCCTGGCTTCTCCAAGACCCTCCTGGGGACCAGGTTAGAAGCCAAGTACCTCTGTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 90 bp | GGAAAGGCCTCCGCAGGATGTTTTTGCAGGCTGAACAGAGGTACTTaGCTTCTAACCTGGTCCCCAGGAGGGTCTTGGAGAAGCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GKASAGCFCRLNRGT*LLTWSPGGSWRSQA Trigger: AGCCTGGCTTCTCCAAGACCCTCCTGGGGACCAGGTTAGAAGCCAAGTACCTCTGTTCAGCCTGCAAAAACATCCTGCGGAGGCCTTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 90 bp | TTTCAAGGTCCCCTTCCAAGTGCATCCATCATTGGGACAGACAGCTaGCAGGCTCTCCACCTCTCTGCGGGCAGCGTTATCTGGAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FQGPLPSASIIGTDS*QALHLSAGSVIWKG Trigger: GCCTTTCCAGATAACGCTGCCCGCAGAGAGGTGGAGAGCCTGCCAGCTGTCTGTCCCAATGATGGATGCACTTGGAAGGGGACCTTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 90 bp | AGCTCTCGTATTCTTTCAAGGTCCCCTTCCAAGTGCATCCATCATTaGGACAGACAGCTGGCAGGCTCTCCACCTCTCTGCGGGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SSRILSRSPSKCIHH*DRQLAGSPPLCGQR Trigger: ACGCTGCCCGCAGAGAGGTGGAGAGCCTGCCAGCTGTCTGTCCCAATGATGGATGCACTTGGAAGGGGACCTTGAAAGAATACGAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 90 bp | GAGGCGGACCAGGCCTTTACATGCAGGACACTCCGTCAGCAGGAATaGGCAAAGTCCTTCGTGGCAGCTCTCGTATTCTTTCAAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EADQAFTCRTLRQQE*AKSFVAALVFFQGP Trigger: GGGACCTTGAAAGAATACGAGAGCTGCCACGAAGGACTTTGCCCATTCCTGCTGACGGAGTGTCCTGCATGTAAAGGCCTGGTCCGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR CAA 90 bp | GCCTATGTCTCAGAGAGCTTCTCTCTTGGGCTACACCCTGCAGGCGCATGCCTTCAAGTGCATCCATCATaGGGACAGACAGCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AYVSESFSLGLHPAGACLQVHPS*GQTAGR Trigger: CCTGCCAGCTGTCTGTCCCAATGATGGATGCACTTG...AAGGCATGCGCCTGCAGGGTGTAGCCCAAGAGAGAAGCTCTCTGAGACATAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR CAA 90 bp | GAGGGCAGTGTCTCCTCCTCCTCCATCACAGCATGCTCGCAGCTGGGCATGTTTTCCAGCTGTTGCACCTaGTTACTCAGGGCCTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: EGSVSSSSITACSQLGMFSSCCT*LLRASI Trigger: GATTGAGGCCCTGAGTAACAAGGTGCAACAGCTGGA...AAACATGCCCAGCTGCGAGCATGCTGTGATGGAGGAGGAGGAGACACTGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS-3UTR CAA 90 bp | TTCCTGCCTTTCTGTGTGATGGTGATTGGCTCTAGGCTGAGGCCCTCCCCAGCATTCTTGGCCTCCATCTaGGACACAGGGCAGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLPFCVMVIGSRLRPSPAFLASI*DTGQKR Trigger: CCTCTTCTGCCCTGTGTCCAAGATGGAGGCCAAGAA...TGCTGGGGAGGGCCTCAGCCTAGAGCCAATCACCATCACACAGAAAGGCAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 90 bp | GTCCTTCGTGGCAGCTCTCGTATTCTTTCAAGGTCCCCTTCCAAGTaGATCCATCATTGGGACAGACAGCTGGCAGGCTCTCCACCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLRGSSRILSRSPSK*IHHWDRQLAGSPPL Trigger: GAGAGGTGGAGAGCCTGCCAGCTGTCTGTCCCAATGATGGATGCACTTGGAAGGGGACCTTGAAAGAATACGAGAGCTGCCACGAAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 90 bp | ACCTTGTTACTCAGGGCCTCAATCTTGTCCTGGTCTAGCCGGTGCTaGCGGCTACAAGCCTCTGCAGTCACTGCTACCCTCTCTACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TLLLRASILSWSSRC*RLQASAVTATLSTS Trigger: TGAAGTAGAGAGGGTAGCAGTGACTGCAGAGGCTTGTAGCCGGCAGCACCGGCTAGACCAGGACAAGATTGAGGCCCTGAGTAACAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR CAA 90 bp | GGACAGAGAGAAAGAAACAAGATGCACCCTTCTCCAGCAAGTTACGGGGCCCAGCAGCTCAGGCTCCTTTaGGGGCATTCCTGCTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GQRERNKMHPSPASYGAQQLRLL*GHSCSV Trigger: CACTGAGCAGGAATGCCCCAAAAGGAGCCTGAGCTG...CTGGGCCCCGTAACTTGCTGGAGAAGGGTGCATCTTGTTTCTTTCTCTCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS-3UTR CAA 90 bp | TTCCTGCCTTTCTGTGTGATGGTGATTGGCTCTAGGCTGAGGCCCTCCCCAGCACGAGGGATCTTCTTCTaGCCACAGCCATCACAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FLPFCVMVIGSRLRPSPARGIFF*PQPSQV Trigger: AACCTGTGATGGCTGTGGCAAGAAGAAGATCCCTCG...TGCTGGGGAGGGCCTCAGCCTAGAGCCAATCACCATCACACAGAAAGGCAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR CAA 90 bp | GAGACTCTCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTTCCAGCTGTTGCACCTaGTTACTCAGGGCCTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: ETLSGEALSEHPPTGLSLSSCCT*LLRASI Trigger: GATTGAGGCCCTGAGTAACAAGGTGCAACAGCTGGA...AAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGAGAGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGCCCTTCTCCAGTGAGGGCCTATGTCTCAGAGAGCTTCTCTCTTGGGCTATGCAACAGAGCATCATaGGGGCCTTTCATCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: AGPSPVRAYVSESFSLGLCNRAS*GPFITT Trigger: CGTGGTGATGAAAGGCCCCAATGATGCTCTGTTGCA...TAGCCCAAGAGAGAAGCTCTCTGAGACATAGGCCCTCACTGGAGAAGGGCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR CAA 90 bp | GAGACTCTCTCTGGAGAGGCCCTTTCTGAGCACCCACCTACAGGTCTCTCCCTTTGCAACAGAGCATCATaGGGGCCTTTCATCACCACG | + |
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Preference number: 5 (lower is better) Translates to: ETLSGEALSEHPPTGLSLCNRAS*GPFITT Trigger: CGTGGTGATGAAAGGCCCCAATGATGCTCTGTTGCA...AAGGGAGAGACCTGTAGGTGGGTGCTCAGAAAGGGCCTCTCCAGAGAGAGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 90 bp | GAGGGATCTTCTTCTTGCCACAGCCATCACAGGTTAAGGGAAACTTaGGGCAGACCTCATAGTGTACCTCCAGGTCCACGTGGCTACAGG | + |
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Preference number: 5 (lower is better) Translates to: EGSSSCHSHHRLRET*GRPHSVPPGPRGYR Trigger: CCTGTAGCCACGTGGACCTGGAGGTACACTATGAGGTCTGCCCCAAGTTTCCCTTAACCTGTGATGGCTGTGGCAAGAAGAAGATCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 90 bp | TCACGGTTCAAGACGCAGACAATGTTCTCAAAGGTTGCTATCTTCTaGTCCAAAATCTGGCACCGCTGGAGTAGCTCTGGCCCCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRFKTQTMFSKVAIF*SKIWHRWSSSGPTW Trigger: CCAGGTGGGGCCAGAGCTACTCCAGCGGTGCCAGATTTTGGAGCAGAAGATAGCAACCTTTGAGAACATTGTCTGCGTCTTGAACCGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 90 bp | GCAGGATGTTTTTGCAGGCTGAACAGAGGTACTTGGCTTCTAACCTaGTCCCCAGGAGGGTCTTGGAGAAGCCAGGCTGTAGCAGTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: AGCFCRLNRGTWLLT*SPGGSWRSQAVAVL Trigger: TAGAACTGCTACAGCCTGGCTTCTCCAAGACCCTCCTGGGGACCAGGTTAGAAGCCAAGTACCTCTGTTCAGCCTGCAAAAACATCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 90 bp | ATGTTCTCAAAGGTTGCTATCTTCTGCTCCAAAATCTGGCACCGCTaGAGTAGCTCTGGCCCCACCTGGTTCAAGGTTCCTGGAGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: MFSKVAIFCSKIWHR*SSSGPTWFKVPGEA Trigger: AGCCTCTCCAGGAACCTTGAACCAGGTGGGGCCAGAGCTACTCCAGCGGTGCCAGATTTTGGAGCAGAAGATAGCAACCTTTGAGAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR CAA 90 bp | GAGGGCAGTGTCTCCTCCTCCTCCATCACAGCATGCTCGCAGCTGGGCATGTTTAGGTCCACAATAGCTTaGATGAAGATCGCATCATCC | + |
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Preference number: 5 (lower is better) Translates to: EGSVSSSSITACSQLGMFRSTIA*MKIASS Trigger: GGATGATGCGATCTTCATCAAAGCTATTGTGGACCT...AAACATGCCCAGCTGCGAGCATGCTGTGATGGAGGAGGAGGAGACACTGCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS TCA 90 bp | AATCTGCAGAGAACCCGGCATTTGCTGCATGCTCTAACATGGTCCTaGAACGTCTCCCGAGGGATCTTCTTCTTGCCACAGCCATCACAG | + |
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Preference number: 5 (lower is better) Translates to: NLQRTRHLLHALTWS*NVSRGIFFLPQPSQ Trigger: CTGTGATGGCTGTGGCAAGAAGAAGATCCCTCGGGAGACGTTTCAGGACCATGTTAGAGCATGCAGCAAATGCCGGGTTCTCTGCAGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 90 bp | ACAGCCAACGGTGTGGAATCTGCAGAGAACCCGGCATTTGCTGCATaGTCTAACATGGTCCTGAAACGTCTCCCGAGGGATCTTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: TANGVESAENPAFAA*SNMVLKRLPRDLLL Trigger: AAGAAGAAGATCCCTCGGGAGACGTTTCAGGACCATGTTAGAGCATGCAGCAAATGCCGGGTTCTCTGCAGATTCCACACCGTTGGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 90 bp | TTACATGCAGGACACTCCGTCAGCAGGAATGGGCAAAGTCCTTCGTaGCAGCTCTCGTATTCTTTCAAGGTCCCCTTCCAAGTGCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: LHAGHSVSRNGQSPS*QLSYSFKVPFQVHP Trigger: TGGATGCACTTGGAAGGGGACCTTGAAAGAATACGAGAGCTGCCACGAAGGACTTTGCCCATTCCTGCTGACGGAGTGTCCTGCATGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 90 bp | ACGCAGACAATGTTCTCAAAGGTTGCTATCTTCTGCTCCAAAATCTaGCACCGCTGGAGTAGCTCTGGCCCCACCTGGTTCAAGGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TQTMFSKVAIFCSKI*HRWSSSGPTWFKVP Trigger: AGGAACCTTGAACCAGGTGGGGCCAGAGCTACTCCAGCGGTGCCAGATTTTGGAGCAGAAGATAGCAACCTTTGAGAACATTGTCTGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR CAA 90 bp | CCAACTGGAGGCTTCTTCCTGCCTTTCTGTGTGATGGTGATTGGCTCTAGGCTGAGGTCCACAATAGCTTaGATGAAGATCGCATCATCC | + |
|
Preference number: 5 (lower is better) Translates to: PTGGFFLPFCVMVIGSRLRSTIA*MKIASS Trigger: GGATGATGCGATCTTCATCAAAGCTATTGTGGACCT...CAGCCTAGAGCCAATCACCATCACACAGAAAGGCAGGAAGAAGCCTCCAGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS-3UTR CAA 90 bp | CACATTTCCTATTGTGCAAACCAGGCAAGGATCCTGAGACAAAGGCCTGTACATCGAGGGATCTTCTTCTaGCCACAGCCATCACAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: HISYCANQARILRQRPVHRGIFF*PQPSQV Trigger: AACCTGTGATGGCTGTGGCAAGAAGAAGATCCCTCG...ATGTACAGGCCTTTGTCTCAGGATCCTTGCCTGGTTTGCACAATAGGAAATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS-3UTR CAA 90 bp | AGAAATCCTAGAGCAATAATCCTGGTTAAAATGTCCACTAGAGTCCTCAGAGAACAAGTGCATCCATCATaGGGACAGACAGCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RNPRAIILVKMSTRVLREQVHPS*GQTAGR Trigger: CCTGCCAGCTGTCTGTCCCAATGATGGATGCACTTG...TTCTCTGAGGACTCTAGTGGACATTTTAACCAGGATTATTGCTCTAGGATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028311.13 |
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| CDS TCA 72 bp | TGGGGCATTCCTGCTCAGTGTGGTGCTCCTTCTCGCTaGGGCGGACCAGGCCTTTACATGCAGGACACTCCG | + |
|
Preference number: 6 (lower is better) Translates to: WGIPAQCGAPSR*GGPGLYMQDTP Trigger: CGGAGTGTCCTGCATGTAAAGGCCTGGTCCGCCTCAGCGAGAAGGAGCACCACACTGAGCAGGAATGCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 72 bp | CTCAGGGCCTCAATCTTGTCCTGGTCTAGCCGGTGCTaGCGGCTACAAGCCTCTGCAGTCACTGCTACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRASILSWSSRC*RLQASAVTATL Trigger: GAGGGTAGCAGTGACTGCAGAGGCTTGTAGCCGGCAGCACCGGCTAGACCAGGACAAGATTGAGGCCCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 72 bp | GTGCTCCTTCTCGCTGAGGCGGACCAGGCCTTTACATaGAGGACACTCCGTCAGCAGGAATGGGCAAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLLLAEADQAFT*RTLRQQEWAKS Trigger: GGACTTTGCCCATTCCTGCTGACGGAGTGTCCTGCATGTAAAGGCCTGGTCCGCCTCAGCGAGAAGGAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 72 bp | CTCATAGTGTACCTCCAGGTCCACGTGGCTACAGGGTaGTCTGCAGTGCTGGCAGCTCAGGCTCCTTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LIVYLQVHVATG*SAVLAAQAPFG Trigger: CCCAAAAGGAGCCTGAGCTGCCAGCACTGCAGAGCACCCTGTAGCCACGTGGACCTGGAGGTACACTATGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 72 bp | CCCCTTCCAAGTGCATCCATCATTGGGACAGACAGCTaGCAGGCTCTCCACCTCTCTGCGGGCAGCGTTATC | + |
|
Preference number: 6 (lower is better) Translates to: PLPSASIIGTDS*QALHLSAGSVI Trigger: GATAACGCTGCCCGCAGAGAGGTGGAGAGCCTGCCAGCTGTCTGTCCCAATGATGGATGCACTTGGAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 72 bp | CAGCTCAGGCTCCTTTTGGGGCATTCCTGCTCAGTGTaGTGCTCCTTCTCGCTGAGGCGGACCAGGCCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: QLRLLLGHSCSV*CSFSLRRTRPL Trigger: TAAAGGCCTGGTCCGCCTCAGCGAGAAGGAGCACCACACTGAGCAGGAATGCCCCAAAAGGAGCCTGAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 72 bp | TCTGGCCCCACCTGGTTCAAGGTTCCTGGAGAGGCTTaGGCCTCCAAGAATGAGCTCAGCAGTAGGGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SGPTWFKVPGEA*ASKNELSSRAR Trigger: CCTAGCCCTACTGCTGAGCTCATTCTTGGAGGCCCAAGCCTCTCCAGGAACCTTGAACCAGGTGGGGCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CAA 90 bp | CAGCTCTCGTATTCTTTCAAGGTCCCCTTCCAAGTGCATCCATCATaGGGACAGACAGCTGGCAGGCTCTCCACCTCTCTGCGGGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: QLSYSFKVPFQVHPS*GQTAGRLSTSLRAA Trigger: CGCTGCCCGCAGAGAGGTGGAGAGCCTGCCAGCTGTCTGTCCCAATGATGGATGCACTTGGAAGGGGACCTTGAAAGAATACGAGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 72 bp | CATTGGGACAGACAGCTGGCAGGCTCTCCACCTCTCTaGGGGCAGCGTTATCTGGAAAGGCCGAACTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: HWDRQLAGSPPL*GQRYLERPNYS Trigger: AGAGTAGTTCGGCCTTTCCAGATAACGCTGCCCGCAGAGAGGTGGAGAGCCTGCCAGCTGTCTGTCCCAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 72 bp | TTACTCAGGGCCTCAATCTTGTCCTGGTCTAGCCGGTaGTGCCGGCTACAAGCCTCTGCAGTCACTGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: LLRASILSWSSR*CRLQASAVTAT Trigger: GGTAGCAGTGACTGCAGAGGCTTGTAGCCGGCAGCACCGGCTAGACCAGGACAAGATTGAGGCCCTGAGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 72 bp | CAGCCACTGGCGATGTTCATGTCACTGACAGGCCTCTaGAAGGAGGACGAGGTTACATCGGGCCTGAATGCG | + |
|
Preference number: 6 (lower is better) Translates to: QPLAMFMSLTGL*KEDEVTSGLNA Trigger: CGCATTCAGGCCCGATGTAACCTCGTCCTCCTTCCAGAGGCCTGTCAGTGACATGAACATCGCCAGTGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CAA 90 bp | TGGAAAGGCCTCCGCAGGATGTTTTTGCAGGCTGAACAGAGGTACTaGGCTTCTAACCTGGTCCCCAGGAGGGTCTTGGAGAAGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: WKGLRRMFLQAEQRY*ASNLVPRRVLEKPG Trigger: GCCTGGCTTCTCCAAGACCCTCCTGGGGACCAGGTTAGAAGCCAAGTACCTCTGTTCAGCCTGCAAAAACATCCTGCGGAGGCCTTTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 72 bp | CACACTGGGCCTGGAAAGGCCTCCGCAGGATGTTTTTaGAGGCTGAACAGAGGTACTTGGCTTCTAACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HTGPGKASAGCF*RLNRGTWLLTW Trigger: CCAGGTTAGAAGCCAAGTACCTCTGTTCAGCCTGCAAAAACATCCTGCGGAGGCCTTTCCAGGCCCAGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CAA 72 bp | CCACACTGGGCCTGGAAAGGCCTCCGCAGGATGTTTTaGCAGGCTGAACAGAGGTACTTGGCTTCTAACCTG | + |
|
Preference number: 6 (lower is better) Translates to: PHWAWKGLRRMF*QAEQRYLASNL Trigger: CAGGTTAGAAGCCAAGTACCTCTGTTCAGCCTGCAAAAACATCCTGCGGAGGCCTTTCCAGGCCCAGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS TCA 72 bp | GAGAAGATAGCTGGTGTCCGGCCAGCTACGGCTTCCTaGCGCTTTCTGGTGAAGTCAGAGATCTTCCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: EKIAGVRPATAS*RFLVKSEIFQM Trigger: CATCTGGAAGATCTCTGACTTCACCAGAAAGCGTCAGGAAGCCGTAGCTGGCCGGACACCAGCTATCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 72 bp | GGCAGCTCTCGTATTCTTTCAAGGTCCCCTTCCAAGTaGATCCATCATTGGGACAGACAGCTGGCAGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSSRILSRSPSK*IHHWDRQLAGS Trigger: AGAGCCTGCCAGCTGTCTGTCCCAATGATGGATGCACTTGGAAGGGGACCTTGAAAGAATACGAGAGCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 72 bp | CATGGTCCTGAAACGTCTCCCGAGGGATCTTCTTCTTaGCACAGCCATCACAGGTTAAGGGAAACTTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: HGPETSPEGSSS*HSHHRLRETWG Trigger: GCCCCAAGTTTCCCTTAACCTGTGATGGCTGTGGCAAGAAGAAGATCCCTCGGGAGACGTTTCAGGACCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 72 bp | GGTGTGGAATCTGCAGAGAACCCGGCATTTGCTGCATaGTCTAACATGGTCCTGAAACGTCTCCCGAGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GVESAENPAFAA*SNMVLKRLPRD Trigger: ATCCCTCGGGAGACGTTTCAGGACCATGTTAGAGCATGCAGCAAATGCCGGGTTCTCTGCAGATTCCACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 72 bp | CCACGAAGAAGAGAGACAGATGAGTTCCCCGCCCAGTaGCGTCGCCATTCAAGTAGACTCGTAGACACATCT | + |
|
Preference number: 6 (lower is better) Translates to: PRRRETDEFPAQ*RRHSSRLVDTS Trigger: AGATGTGTCTACGAGTCTACTTGAATGGCGACGGCACTGGGCGGGGAACTCATCTGTCTCTCTTCTTCGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 72 bp | ATTCTTTCAAGGTCCCCTTCCAAGTGCATCCATCATTaGGACAGACAGCTGGCAGGCTCTCCACCTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ILSRSPSKCIHH*DRQLAGSPPLC Trigger: GCAGAGAGGTGGAGAGCCTGCCAGCTGTCTGTCCCAATGATGGATGCACTTGGAAGGGGACCTTGAAAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 72 bp | GGACACTCCGTCAGCAGGAATGGGCAAAGTCCTTCGTaGCAGCTCTCGTATTCTTTCAAGGTCCCCTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GHSVSRNGQSPS*QLSYSFKVPFQ Trigger: TTGGAAGGGGACCTTGAAAGAATACGAGAGCTGCCACGAAGGACTTTGCCCATTCCTGCTGACGGAGTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 72 bp | CAGGCCTTTACATGCAGGACACTCCGTCAGCAGGAATaGGCAAAGTCCTTCGTGGCAGCTCTCGTATTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: QAFTCRTLRQQE*AKSFVAALVFF Trigger: AAAGAATACGAGAGCTGCCACGAAGGACTTTGCCCATTCCTGCTGACGGAGTGTCCTGCATGTAAAGGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 72 bp | TCTTCTTGCCACAGCCATCACAGGTTAAGGGAAACTTaGGGCAGACCTCATAGTGTACCTCCAGGTCCACGT | + |
|
Preference number: 6 (lower is better) Translates to: SSCHSHHRLRET*GRPHSVPPGPR Trigger: ACGTGGACCTGGAGGTACACTATGAGGTCTGCCCCAAGTTTCCCTTAACCTGTGATGGCTGTGGCAAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CCA 72 bp | ATGTTCTCAAAGGTTGCTATCTTCTGCTCCAAAATCTaGCACCGCTGGAGTAGCTCTGGCCCCACCTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: MFSKVAIFCSKI*HRWSSSGPTWF Trigger: GAACCAGGTGGGGCCAGAGCTACTCCAGCGGTGCCAGATTTTGGAGCAGAAGATAGCAACCTTTGAGAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS CAA 72 bp | TATTCTTTCAAGGTCCCCTTCCAAGTGCATCCATCATaGGGACAGACAGCTGGCAGGCTCTCCACCTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: YSFKVPFQVHPS*GQTAGRLSTSL Trigger: CAGAGAGGTGGAGAGCCTGCCAGCTGTCTGTCCCAATGATGGATGCACTTGGAAGGGGACCTTGAAAGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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| CDS GCA 72 bp | AAGACGCAGACAATGTTCTCAAAGGTTGCTATCTTCTaGTCCAAAATCTGGCACCGCTGGAGTAGCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KTQTMFSKVAIF*SKIWHRWSSSG Trigger: GCCAGAGCTACTCCAGCGGTGCCAGATTTTGGAGCAGAAGATAGCAACCTTTGAGAACATTGTCTGCGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028311.13 ENSMUST00000114234.2 |
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