Pregenerated sensors for TRAF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026875Ensembl transcript IDs: ENSMUST00000028234.12, ENSMUST00000113064.8, ENSMUST00000172159.8, ENSMUST00000201690.2
Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGTTTCTCCAGCCTCACATCAGCCATAACCAGCATGCTGTGGCGCTaGAGTCATGCCAGCCTTGGCTCCTCCTTGTCGTGGGCTGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: RFSSLTSAITSMLWR*SHASLGSSLSWAVG Trigger: GCCCACAGCCCACGACAAGGAGGAGCCAAGGCTGGCATGACTTCAGCGCCACAGCATGCTGGTTATGGCTGATGTGAGGCTGGAGAAACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| 3UTR TCA 90 bp | GCAAGCCTGTGCACCTCAGTGGGCGGCTGTGAGGACACAGTGAAATaGGATTTGCCAGCAGCTTGCCTCCCCGATCCCTCAGTCACCTGG | + |
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Preference number: 1 (lower is better) Translates to: ASLCTSVGGCEDTVK*DLPAACLPDPSVTW Trigger: CCAGGTGACTGAGGGATCGGGGAGGCAAGCTGCTGGCAAATCTCATTTCACTGTGTCCTCACAGCCGCCCACTGAGGTGCACAGGCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR CCA 90 bp | TGTCCCTGCCATGATTGCTCTGGCCTCGGCTTTCCCATCTGCAAATaGGTGCAAGCCTGTGCACCTCAGTGGGCGGCTGTGAGGACACAG | + |
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Preference number: 1 (lower is better) Translates to: CPCHDCSGLGFPICK*VQACAPQWAAVRTQ Trigger: CTGTGTCCTCACAGCCGCCCACTGAGGTGCACAGGCTTGCACCCATTTGCAGATGGGAAAGCCGAGGCCAGAGCAATCATGGCAGGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR CCA 90 bp | CAGAGCTGGCCCTCGGGCTGGGTGAAAGACCTTCCAACCATTTCATaGCTGGAGGGAAACCTGGAGGAAGGGAGGAAGACCGGACACCGA | + |
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Preference number: 1 (lower is better) Translates to: QSWPSGWVKDLPTIS*LEGNLEEGRKTGHR Trigger: TCGGTGTCCGGTCTTCCTCCCTTCCTCCAGGTTTCCCTCCAGCCATGAAATGGTTGGAAGGTCTTTCACCCAGCCCGAGGGCCAGCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR TCA 90 bp | TGGGTGCAAGCCTGTGCACCTCAGTGGGCGGCTGTGAGGACACAGTaGAATGAGATTTGCCAGCAGCTTGCCTCCCCGATCCCTCAGTCA | + |
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Preference number: 1 (lower is better) Translates to: WVQACAPQWAAVRTQ*NEICQQLASPIPQS Trigger: TGACTGAGGGATCGGGGAGGCAAGCTGCTGGCAAATCTCATTTCACTGTGTCCTCACAGCCGCCCACTGAGGTGCACAGGCTTGCACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR TCA 90 bp | CCATCTGCAAATGGGTGCAAGCCTGTGCACCTCAGTGGGCGGCTGTaGGGACACAGTGAAATGAGATTTGCCAGCAGCTTGCCTCCCCGA | + |
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Preference number: 1 (lower is better) Translates to: PSANGCKPVHLSGRL*GHSEMRFASSLPPR Trigger: TCGGGGAGGCAAGCTGCTGGCAAATCTCATTTCACTGTGTCCTCACAGCCGCCCACTGAGGTGCACAGGCTTGCACCCATTTGCAGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR GCA 90 bp | CTGCAGCTGCAGTGTCCAGGCACAGACGACACTCAGGGCTGTCCGTaGTTCGCTGAAAGCACAGTGCCTCTCACACTGTGTGAAGACAAG | + |
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Preference number: 1 (lower is better) Translates to: LQLQCPGTDDTQGCP*FAESTVPLTLCEDK Trigger: CTTGTCTTCACACAGTGTGAGAGGCACTGTGCTTTCAGCGAAGCACGGACAGCCCTGAGTGTCGTCTGTGCCTGGACACTGCAGCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR TCA 90 bp | ATGGCAGACCCTAGCAGTGTAGTCTCCCTTTGGCTGGGCACTCTGTaGGCAGTCGTGAAGGTGCTGTGTGTTGGACACCAGCTTCAGACT | + |
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Preference number: 1 (lower is better) Translates to: MADPSSVVSLWLGTL*AVVKVLCVGHQLQT Trigger: AGTCTGAAGCTGGTGTCCAACACACAGCACCTTCACGACTGCTCACAGAGTGCCCAGCCAAAGGGAGACTACACTGCTAGGGTCTGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR GCA 90 bp | GAAACCTGGAGGAAGGGAGGAAGACCGGACACCGAAGATAGGGCTTaGAATGTTAGTGTCCCTGCCATGATTGCTCTGGCCTCGGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: ETWRKGGRPDTEDRA*NVSVPAMIALASAF Trigger: GAAAGCCGAGGCCAGAGCAATCATGGCAGGGACACTAACATTGCAAGCCCTATCTTCGGTGTCCGGTCTTCCTCCCTTCCTCCAGGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR CCA 90 bp | CCTTTGGCTGGGCACTCTGTGAGCAGTCGTGAAGGTGCTGTGTGTTaGACACCAGCTTCAGACTTGCATGGTGAGCTCTTTCTTGGGTGT | + |
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Preference number: 1 (lower is better) Translates to: PLAGHSVSSREGAVC*TPASDLHGELFLGC Trigger: ACACCCAAGAAAGAGCTCACCATGCAAGTCTGAAGCTGGTGTCCAACACACAGCACCTTCACGACTGCTCACAGAGTGCCCAGCCAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR GCA 90 bp | CCACTTTTTATCATTGTCTGTGGCTCACTGTGGTCTCTGAGCAAATaGAAGGTTGGCAATATCCTGCAGAGCTGGCCCTCGGGCTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: PLFIIVCGSLWSLSK*KVGNILQSWPSGWV Trigger: CACCCAGCCCGAGGGCCAGCTCTGCAGGATATTGCCAACCTTGCATTTGCTCAGAGACCACAGTGAGCCACAGACAATGATAAAAAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR TCA 90 bp | GTTAACAGGCCCAGGCCCTGCAGGTGTGCAAGAGCTCATAGATGTTaGTTTCTGTGTTCTGGCCAGTTGGCCTATCTATGTTTTGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: VNRPRPCRCARAHRC*FLCSGQLAYLCFGW Trigger: CCAGCCAAAACATAGATAGGCCAACTGGCCAGAACACAGAAATCAACATCTATGAGCTCTTGCACACCTGCAGGGCCTGGGCCTGTTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR CCA 90 bp | TTATTATCATGCAGGCTTCCCGATGAACTAGAAGATTCAGGAGAGTaGGTTGCAGATCTCACTATTTCCCCTGCAGCTGCAGTGTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: LLSCRLPDELEDSGE*VADLTISPAAAVSR Trigger: CCTGGACACTGCAGCTGCAGGGGAAATAGTGAGATCTGCAACCCACTCTCCTGAATCTTCTAGTTCATCGGGAAGCCTGCATGATAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR TCA 90 bp | CCCTGGGTATTGCTCCAGAATCCTCTGTGGGTGTGGTCTCACACCTaGAGCTTGCAATTCAAGGCTTTTGTTATTTGTTTTGTCGGTAAA | + |
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Preference number: 1 (lower is better) Translates to: PWVLLQNPLWVWSHT*SLQFKAFVICFVGK Trigger: TTTACCGACAAAACAAATAACAAAAGCCTTGAATTGCAAGCTTCAGGTGTGAGACCACACCCACAGAGGATTCTGGAGCAATACCCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGGTCTCAACATTCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTCCTTGTCGTGGGCTGTaGGCTCCAAGGGCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RLVSTFRSCWHAGLLVSCPCRGL*APRAGR Trigger: CCTGCCTGCCCTTGGAGCCCACAGCCCACGACAAGG...ACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGAATGTTGAGACCAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGAGAGTGGGTTGCAGATCTCACTATTTCCCCTGCAGCTGCAGTGTCCAGGCCTTGTCGTGGGCTGTaGGCTCCAAGGGCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SGEWVADLTISPAAAVSRPCRGL*APRAGR Trigger: CCTGCCTGCCCTTGGAGCCCACAGCCCACGACAAGG...CCTGGACACTGCAGCTGCAGGGGAAATAGTGAGATCTGCAACCCACTCTCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR-3UTR TCA 90 bp | TTTAAACCACTGTCGTGCCCTCCTGTTAACAGGCCCAGGCCCTGCAGGTGTGCAAGCATGCTGTGGCGCTaGAGTCATGCCAGCCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: FKPLSCPPVNRPRPCRCASMLWR*SHASLG Trigger: GCCAAGGCTGGCATGACTTCAGCGCCACAGCATGCT...TGCACACCTGCAGGGCCTGGGCCTGTTAACAGGAGGGCACGACAGTGGTTTAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR-3UTR GCA 90 bp | TTTAAACCACTGTCGTGCCCTCCTGTTAACAGGCCCAGGCCCTGCAGGTGTGCATATTTCCCCTGCAGCTaGAGTGTCCAGGCACAGACG | + |
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Preference number: 2 (lower is better) Translates to: FKPLSCPPVNRPRPCRCAYFPCS*SVQAQT Trigger: CGTCTGTGCCTGGACACTGCAGCTGCAGGGGAAATA...TGCACACCTGCAGGGCCTGGGCCTGTTAACAGGAGGGCACGACAGTGGTTTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCAGCATGCTGTGGCGCTaGAGTCATGCCAGCCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: PDAARKHFPGQFLGLPVCSMLWR*SHASLG Trigger: GCCAAGGCTGGCATGACTTCAGCGCCACAGCATGCT...GCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| 3UTR-3UTR CCA 90 bp | CACTTAGGCCCCATAGCCTTGGCTCAATGTCCAAGCCTCAGGCCTGGCTCTTTTTCCCCCAGTCTAAGCTaGTTCTGTCAGGAGACACCC | + |
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Preference number: 2 (lower is better) Translates to: HLGPIALAQCPSLRPGSFSPSLS*FCQETP Trigger: GGGTGTCTCCTGACAGAACCAGCTTAGACTGGGGGA...AAAAGAGCCAGGCCTGAGGCTTGGACATTGAGCCAAGGCTATGGGGCCTAAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTAGTCTGTGTGAAAAGAAAGTCATGCCAGCCTTaGCTCCTCCTTGTCGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: SEAAGMLASWCRVVCVKRKSCQP*LLLVVG Trigger: GCCCACGACAAGGAGGAGCCAAGGCTGGCATGACTT...TCTTTTCACACAGACTACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| 3UTR-3UTR CCA 90 bp | CACTCTGTGAGCAGTCGTGAAGGTGCTGTGTGTTGGACACCAGCTTCAGACTTGAAGTCATGCCAGCCTTaGCTCCTCCTTGTCGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: HSVSSREGAVCWTPASDLKSCQP*LLLVVG Trigger: GCCCACGACAAGGAGGAGCCAAGGCTGGCATGACTT...CAAGTCTGAAGCTGGTGTCCAACACACAGCACCTTCACGACTGCTCACAGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGAGAGTGGGTTGCAGATCTCACTATTTCCCCTGCAGCTGCAGTGTCCAGGACATTCAGAAGCTGCTaGCATGCTGGCCTCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: SGEWVADLTISPAAAVSRTFRSC*HAGLLV Trigger: CACCAGGAGGCCAGCATGCCAGCAGCTTCTGAATGT...CCTGGACACTGCAGCTGCAGGGGAAATAGTGAGATCTGCAACCCACTCTCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCTCCCCTCAGAAGTGCGCCATTAAAGGTGTGGGGATGCAGCTAAGCAGGTCAACATTCAGAAGCTaGTGGCATGCTGGCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: FSSPQKCAIKGVGMQLSRSTFRS*WHAGLL Trigger: CAGGAGGCCAGCATGCCAGCAGCTTCTGAATGTTGA...CCTGCTTAGCTGCATCCCCACACCTTTAATGGCGCACTTCTGAGGGGAGGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGCCCTGTGGTTCTAGTTTTGAGTCTGAACAGAGAGATGGGGGCATTTTTGGCTCCTCCTTGTCGTaGGCTGTGGGCTCCAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LLPCGSSFESEQRDGGIFGSSLS*AVGSKG Trigger: GCCCTTGGAGCCCACAGCCCACGACAAGGAGGAGCC...AAAAATGCCCCCATCTCTCTGTTCAGACTCAAAACTAGAACCACAGGGCAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCTCAACATTCAGAAGCTaGTGGCATGCTGGCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: PDAARKHFPGQFLGLPVCSTFRS*WHAGLL Trigger: CAGGAGGCCAGCATGCCAGCAGCTTCTGAATGTTGA...GCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| 3UTR-3UTR GCA 90 bp | CACTCTGTGAGCAGTCGTGAAGGTGCTGTGTGTTGGACACCAGCTTCAGACTTGGCTCTTTCTTGGGTGTaGTTCTGTCTGTCTGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: HSVSSREGAVCWTPASDLALSWV*FCLSVG Trigger: CCCAACAGACAGACAGAAGCACACCCAAGAAAGAGC...CAAGTCTGAAGCTGGTGTCCAACACACAGCACCTTCACGACTGCTCACAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGATCTCCAGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTAAGTCATGCCAGCCTTaGCTCCTCCTTGTCGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: SKISRCSQKAFPRAVSGFKSCQP*LLLVVG Trigger: GCCCACGACAAGGAGGAGCCAAGGCTGGCATGACTT...AAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCTGGAGATCTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTTTACCTGTTTGCGTGTCTGTTAACATAGGAACTCAGTCCAGGGCAGGTACATTCAGAAGCTGCTaGCATGCTGGCCTCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: LGLPVCVSVNIGTQSRAGTFRSC*HAGLLV Trigger: CACCAGGAGGCCAGCATGCCAGCAGCTTCTGAATGT...ACCTGCCCTGGACTGAGTTCCTATGTTAACAGACACGCAAACAGGTAAACCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGTCGTGTAGTCTGTGTGAAAAGAGCACTTCTGTCTTCTCCTCCACTCTGTTCCCCCAGTCTAAGCTaGTTCTGTCAGGAGACACCC | + |
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Preference number: 2 (lower is better) Translates to: WCRVVCVKRALLSSPPLCSPSLS*FCQETP Trigger: GGGTGTCTCCTGACAGAACCAGCTTAGACTGGGGGA...ACAGAGTGGAGGAGAAGACAGAAGTGCTCTTTTCACACAGACTACACGACACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGATCTCCAGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACATTCAGAAGCTGCTaGCATGCTGGCCTCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: SKISRCSQKAFPRAVSGFTFRSC*HAGLLV Trigger: CACCAGGAGGCCAGCATGCCAGCAGCTTCTGAATGT...AAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCTGGAGATCTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCTGTGTGTTGGACACCAGCTTCAGACTTGCATGGTGAGCTCTTTCTTGGGTTGTCTGTTGGGTAACTaGGCTGCTAGGTTTAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: VLCVGHQLQTCMVSSFLGCLLGN*AARFRG Trigger: ACCTCTAAACCTAGCAGCCCAGTTACCCAACAGACA...ACCCAAGAAAGAGCTCACCATGCAAGTCTGAAGCTGGTGTCCAACACACAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR CAA 90 bp | GACTTGCATGGTGAGCTCTTTCTTGGGTGTGCTTCTGTCTGTCTGTaGGGTAACTGGGCTGCTAGGTTTAGAGGTTTAGGTGAATGGGAA | + |
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Preference number: 2 (lower is better) Translates to: DLHGELFLGCASVCL*GNWAARFRGLGEWE Trigger: TTCCCATTCACCTAAACCTCTAAACCTAGCAGCCCAGTTACCCAACAGACAGACAGAAGCACACCCAAGAAAGAGCTCACCATGCAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR-3UTR CCA 90 bp | TATTACATGGGTTCTAGTGATCAAACTCAGGCCCACACAGACAGAGACATCTCATTAGTCTCCACAAGATaGACAGAACTTCTTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: YYMGSSDQTQAHTDRDISLVSTR*TELLSC Trigger: ACAAGAAAGAAGTTCTGTCCATCTTGTGGAGACTAA...TGAGATGTCTCTGTCTGTGTGGGCCTGAGTTTGATCACTAGAACCCATGTAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201690.2 |
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| 3UTR GCA 72 bp | CCCTGCCATGATTGCTCTGGCCTCGGCTTTCCCATCTaGAAATGGGTGCAAGCCTGTGCACCTCAGTGGGCG | + |
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Preference number: 3 (lower is better) Translates to: PCHDCSGLGFPI*KWVQACAPQWA Trigger: CGCCCACTGAGGTGCACAGGCTTGCACCCATTTGCAGATGGGAAAGCCGAGGCCAGAGCAATCATGGCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR TCA 72 bp | GCCTGTGCACCTCAGTGGGCGGCTGTGAGGACACAGTaGAATGAGATTTGCCAGCAGCTTGCCTCCCCGATC | + |
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Preference number: 3 (lower is better) Translates to: ACAPQWAAVRTQ*NEICQQLASPI Trigger: GATCGGGGAGGCAAGCTGCTGGCAAATCTCATTTCACTGTGTCCTCACAGCCGCCCACTGAGGTGCACAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR CCA 72 bp | CATGATTGCTCTGGCCTCGGCTTTCCCATCTGCAAATaGGTGCAAGCCTGTGCACCTCAGTGGGCGGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: HDCSGLGFPICK*VQACAPQWAAV Trigger: CACAGCCGCCCACTGAGGTGCACAGGCTTGCACCCATTTGCAGATGGGAAAGCCGAGGCCAGAGCAATCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR-3UTR CAA 90 bp | TGTACGCACACGTTTCTCCAGCCTCACATCAGCCATAACCAGCATGCTGTGGCGGAAGTCATGCCAGCCTaGGCTCCTCCTTGTCGTGGG | + |
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Preference number: 3 (lower is better) Translates to: CTHTFLQPHISHNQHAVAEVMPA*APPCRG Trigger: CCCACGACAAGGAGGAGCCAAGGCTGGCATGACTTC...CGCCACAGCATGCTGGTTATGGCTGATGTGAGGCTGGAGAAACGTGTGCGTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| 3UTR TCA 72 bp | AGCCTCACATCAGCCATAACCAGCATGCTGTGGCGCTaGAGTCATGCCAGCCTTGGCTCCTCCTTGTCGTGG | + |
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Preference number: 3 (lower is better) Translates to: SLTSAITSMLWR*SHASLGSSLSW Trigger: CCACGACAAGGAGGAGCCAAGGCTGGCATGACTTCAGCGCCACAGCATGCTGGTTATGGCTGATGTGAGGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| 3UTR TCA 72 bp | TGCACCTCAGTGGGCGGCTGTGAGGACACAGTGAAATaGGATTTGCCAGCAGCTTGCCTCCCCGATCCCTCA | + |
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Preference number: 3 (lower is better) Translates to: CTSVGGCEDTVK*DLPAACLPDPS Trigger: TGAGGGATCGGGGAGGCAAGCTGCTGGCAAATCTCATTTCACTGTGTCCTCACAGCCGCCCACTGAGGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR GCA 72 bp | CAGTGTCCAGGCACAGACGACACTCAGGGCTGTCCGTaGTTCGCTGAAAGCACAGTGCCTCTCACACTGTGT | + |
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Preference number: 3 (lower is better) Translates to: QCPGTDDTQGCP*FAESTVPLTLC Trigger: ACACAGTGTGAGAGGCACTGTGCTTTCAGCGAAGCACGGACAGCCCTGAGTGTCGTCTGTGCCTGGACACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR GCA 72 bp | CCTCGGCTTTCCCATCTGCAAATGGGTGCAAGCCTGTaGACCTCAGTGGGCGGCTGTGAGGACACAGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: PRLSHLQMGASL*TSVGGCEDTVK Trigger: TTTCACTGTGTCCTCACAGCCGCCCACTGAGGTGCACAGGCTTGCACCCATTTGCAGATGGGAAAGCCGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR CCA 72 bp | CCCTCGGGCTGGGTGAAAGACCTTCCAACCATTTCATaGCTGGAGGGAAACCTGGAGGAAGGGAGGAAGACC | + |
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Preference number: 3 (lower is better) Translates to: PSGWVKDLPTIS*LEGNLEEGRKT Trigger: GGTCTTCCTCCCTTCCTCCAGGTTTCCCTCCAGCCATGAAATGGTTGGAAGGTCTTTCACCCAGCCCGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR GCA 72 bp | AGAGTGGGTTGCAGATCTCACTATTTCCCCTGCAGCTaGAGTGTCCAGGCACAGACGACACTCAGGGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: RVGCRSHYFPCS*SVQAQTTLRAV Trigger: GACAGCCCTGAGTGTCGTCTGTGCCTGGACACTGCAGCTGCAGGGGAAATAGTGAGATCTGCAACCCACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR TCA 72 bp | AATGGGTGCAAGCCTGTGCACCTCAGTGGGCGGCTGTaGGGACACAGTGAAATGAGATTTGCCAGCAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: NGCKPVHLSGRL*GHSEMRFASSL Trigger: CAAGCTGCTGGCAAATCTCATTTCACTGTGTCCTCACAGCCGCCCACTGAGGTGCACAGGCTTGCACCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR TCA 72 bp | TTGGCAATATCCTGCAGAGCTGGCCCTCGGGCTGGGTaGAAGACCTTCCAACCATTTCATGGCTGGAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: LAISCRAGPRAG*KTFQPFHGWRE Trigger: TTCCCTCCAGCCATGAAATGGTTGGAAGGTCTTTCACCCAGCCCGAGGGCCAGCTCTGCAGGATATTGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| 3UTR CCA 72 bp | GGTAACTGGGCTGCTAGGTTTAGAGGTTTAGGTGAATaGGAAGCTGAAGGGGAGGGGGACCCTGGGTATTGC | + |
|
Preference number: 3 (lower is better) Translates to: GNWAARFRGLGE*EAEGEGDPGYC Trigger: GCAATACCCAGGGTCCCCCTCCCCTTCAGCTTCCCATTCACCTAAACCTCTAAACCTAGCAGCCCAGTTACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGTTTACCTGTTTGCGTGTCTGTTAACATAGGAACTCAGTCCAGGGCAGGTGAAGTCATGCCAGCCTaGGCTCCTCCTTGTCGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LGLPVCVSVNIGTQSRAGEVMPA*APPCRG Trigger: CCCACGACAAGGAGGAGCCAAGGCTGGCATGACTTC...ACCTGCCCTGGACTGAGTTCCTATGTTAACAGACACGCAAACAGGTAAACCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGCACAGTGCCTCTCACACTGTGTGAAGACAAGGTTCTCCTCCCCTCAGAACAGTGTAGTCTCCCTTaGGCTGGGCACTCTGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ESTVPLTLCEDKVLLPSEQCSLP*AGHSVS Trigger: GCTCACAGAGTGCCCAGCCAAAGGGAGACTACACTG...TTCTGAGGGGAGGAGAACCTTGTCTTCACACAGTGTGAGAGGCACTGTGCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| 3UTR GCA 72 bp | CACTGTGTGAAGACAAGGTTCTCCTCCCCTCAGAAGTaGGCCATTAAAGGTGTGGGGATGCAGCTAAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: HCVKTRFSSPQK*AIKGVGMQLSR Trigger: CCTGCTTAGCTGCATCCCCACACCTTTAATGGCGCACTTCTGAGGGGAGGAGAACCTTGTCTTCACACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| 3UTR CCA 72 bp | GGGCACTCTGTGAGCAGTCGTGAAGGTGCTGTGTGTTaGACACCAGCTTCAGACTTGCATGGTGAGCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GHSVSSREGAVC*TPASDLHGELF Trigger: AAAGAGCTCACCATGCAAGTCTGAAGCTGGTGTCCAACACACAGCACCTTCACGACTGCTCACAGAGTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| 3UTR CCA 72 bp | AAGACCTTCCAACCATTTCATGGCTGGAGGGAAACCTaGAGGAAGGGAGGAAGACCGGACACCGAAGATAGG | + |
|
Preference number: 3 (lower is better) Translates to: KTFQPFHGWRET*RKGGRPDTEDR Trigger: CCTATCTTCGGTGTCCGGTCTTCCTCCCTTCCTCCAGGTTTCCCTCCAGCCATGAAATGGTTGGAAGGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| 3UTR CCA 72 bp | CTGAGCAAATGCAAGGTTGGCAATATCCTGCAGAGCTaGCCCTCGGGCTGGGTGAAAGACCTTCCAACCATT | + |
|
Preference number: 3 (lower is better) Translates to: LSKCKVGNILQS*PSGWVKDLPTI Trigger: AATGGTTGGAAGGTCTTTCACCCAGCCCGAGGGCCAGCTCTGCAGGATATTGCCAACCTTGCATTTGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGTCGTGTAGTCTGTGTGAAAAGAGCACTTCTGTCTTCTCCTCCACTCTGTGAAGTCATGCCAGCCTaGGCTCCTCCTTGTCGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: WCRVVCVKRALLSSPPLCEVMPA*APPCRG Trigger: CCCACGACAAGGAGGAGCCAAGGCTGGCATGACTTC...ACAGAGTGGAGGAGAAGACAGAAGTGCTCTTTTCACACAGACTACACGACACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| 3UTR GCA 72 bp | ATCATTGTCTGTGGCTCACTGTGGTCTCTGAGCAAATaGAAGGTTGGCAATATCCTGCAGAGCTGGCCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: IIVCGSLWSLSK*KVGNILQSWPS Trigger: CGAGGGCCAGCTCTGCAGGATATTGCCAACCTTGCATTTGCTCAGAGACCACAGTGAGCCACAGACAATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| 3UTR TCA 72 bp | TCAATGTCCAAGCCTCAGGCCTGGCTCTTTTCATCCTaGTCTAGGCTGGTCTCAACATTCAGAAGCTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SMSKPQAWLFSS*SRLVSTFRSCW Trigger: CCAGCAGCTTCTGAATGTTGAGACCAGCCTAGATCAGGATGAAAAGAGCCAGGCCTGAGGCTTGGACATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| 3UTR TCA 72 bp | CCCAGGCCCTGCAGGTGTGCAAGAGCTCATAGATGTTaGTTTCTGTGTTCTGGCCAGTTGGCCTATCTATGT | + |
|
Preference number: 3 (lower is better) Translates to: PRPCRCARAHRC*FLCSGQLAYLC Trigger: ACATAGATAGGCCAACTGGCCAGAACACAGAAATCAACATCTATGAGCTCTTGCACACCTGCAGGGCCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| 3UTR GCA 72 bp | GTGAAGGTGCTGTGTGTTGGACACCAGCTTCAGACTTaGATGGTGAGCTCTTTCTTGGGTGTGCTTCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VKVLCVGHQLQT*MVSSFLGVLLS Trigger: AGACAGAAGCACACCCAAGAAAGAGCTCACCATGCAAGTCTGAAGCTGGTGTCCAACACACAGCACCTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| 3UTR CCA 72 bp | TGCAGGCTTCCCGATGAACTAGAAGATTCAGGAGAGTaGGTTGCAGATCTCACTATTTCCCCTGCAGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: CRLPDELEDSGE*VADLTISPAAA Trigger: TGCAGCTGCAGGGGAAATAGTGAGATCTGCAACCCACTCTCCTGAATCTTCTAGTTCATCGGGAAGCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGCACAGTGCCTCTCACACTGTGTGAAGACAAGGTTCTCCTCCCCTCAGAAACACCAGCTTCAGACTaGCATGGTGAGCTCTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ESTVPLTLCEDKVLLPSETPASD*HGELFL Trigger: AAGAAAGAGCTCACCATGCAAGTCTGAAGCTGGTGT...TTCTGAGGGGAGGAGAACCTTGTCTTCACACAGTGTGAGAGGCACTGTGCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| 3UTR GCA 72 bp | AAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTaGGTGTCTGTTAACATAGGAACTCAGTCCAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KHFPGQFLGLPV*VSVNIGTQSRA Trigger: TGCCCTGGACTGAGTTCCTATGTTAACAGACACGCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| 3UTR TCA 72 bp | GGAAGAGAACAGCACAGAGCTTCTCTGGAAGATAAATaGTCTGTCTGTTTAAACCACTGTCGTGCCCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GREQHRASLEDK*SVCLNHCRALL Trigger: CAGGAGGGCACGACAGTGGTTTAAACAGACAGATCATTTATCTTCCAGAGAAGCTCTGTGCTGTTCTCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| 3UTR CCA 72 bp | TTTCTTGGGTGTGCTTCTGTCTGTCTGTTGGGTAACTaGGCTGCTAGGTTTAGAGGTTTAGGTGAATGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: FLGCASVCLLGN*AARFRGLGEWE Trigger: TTCCCATTCACCTAAACCTCTAAACCTAGCAGCCCAGTTACCCAACAGACAGACAGAAGCACACCCAAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| 3UTR CCA 72 bp | TTCTTCCCACTTTTTATCATTGTCTGTGGCTCACTGTaGTCTCTGAGCAAATGCAAGGTTGGCAATATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FFPLFIIVCGSL*SLSKCKVGNIL Trigger: CAGGATATTGCCAACCTTGCATTTGCTCAGAGACCACAGTGAGCCACAGACAATGATAAAAAGTGGGAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| 3UTR-3UTR CAA 90 bp | AATCAGGGATTCAGTGTCATTCTTGACTATATACTGAGTTTGAAACCAGTCTGGATGGTGAGCTCTTTCTaGGGTGTGCTTCTGTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: NQGFSVILDYILSLKPVWMVSSF*GVLLSV Trigger: GACAGACAGAAGCACACCCAAGAAAGAGCTCACCAT...CCAGACTGGTTTCAAACTCAGTATATAGTCAAGAATGACACTGAATCCCTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| 3UTR TCA 72 bp | CTTTTAGTGATAATTATTATCATGCAGGCTTCCCGATaGACTAGAAGATTCAGGAGAGTGGGTTGCAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: LLVIIIIMQASR*TRRFRRVGCRS Trigger: AGATCTGCAACCCACTCTCCTGAATCTTCTAGTTCATCGGGAAGCCTGCATGATAATAATTATCACTAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | GTCATGCCAGCCTTGGCTCCTCCTTGTCGTGGGCTGTGGGCTCCAAGGGCAGGCCCGCTGGAAGGAGGCTaGGCTCAGGTCAGGCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VMPALAPPCRGLWAPRAGPLEGG*AQVRPE Trigger: TTCCGGCCTGACCTGAGCTCAGCCTCCTTCCAGCGG...GCCTGCCCTTGGAGCCCACAGCCCACGACAAGGAGGAGCCAAGGCTGGCATGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTAACTCTGGGCTCCGATaGGTCCTGGCAGGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCGLQGQAGPGCLAKSPSNSGLR*VLAGSR Trigger: CCTGCTCCCTGCCAGGACCCATCGGAGCCCAGAGTT...ACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCCACAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | GTCATGCCAGCCTTGGCTCCTCCTTGTCGTGGGCTGTGGGCTCCAAGGGCAGGCGCGGCCAGTGCCAGGTaGGAAGCCTCCACTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VMPALAPPCRGLWAPRAGAASAR*EASTSL Trigger: CAAGGAAGTGGAGGCTTCCCACCTGGCACTGGCCGC...GCCTGCCCTTGGAGCCCACAGCCCACGACAAGGAGGAGCCAAGGCTGGCATGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTTCCAACTGGCTCTGGTaGATGGAGGCGGCCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GCGLQGQAGPGCLAKSPSSNWLW*MEAASA Trigger: GGCACTGGCCGCCTCCATCCACCAGAGCCAGTTGGA...ACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCCACAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | GTCATGCCAGCCTTGGCTCCTCCTTGTCGTGGGCTGTGGGCTCCAAGGGCAGGCTCCAACTGGCTCTGGTaGATGGAGGCGGCCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VMPALAPPCRGLWAPRAGSNWLW*MEAASA Trigger: GGCACTGGCCGCCTCCATCCACCAGAGCCAGTTGGA...GCCTGCCCTTGGAGCCCACAGCCCACGACAAGGAGGAGCCAAGGCTGGCATGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGTGGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTCTGAAGCTGCAGCTCTaGCAGGTTCCGCTCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCGLQGQAGPGCLAKSPSLKLQL*QVPLQC Trigger: GCACTGGAGCGGAACCTGTCAGAGCTGCAGCTTCAG...ACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCCACAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGTGGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTCTGGAGAGAAGAGGCTaGCAGTCCGGCCACACACTG | + |
|
Preference number: 4 (lower is better) Translates to: GCGLQGQAGPGCLAKSPSLERRG*QSGHTL Trigger: CAGTGTGTGGCCGGACTGTCAGCCTCTTCTCTCCAG...ACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCCACAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTCTAAGCACTGGCTCTGGTGGATaGAGGCGGCCAGTGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLQGQAGPGCLAKSPSLSTGSGG*RRPVPG Trigger: ACCTGGCACTGGCCGCCTCCATCCACCAGAGCCAGT...GCTTAGACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTCTAAGCAGCCGCTGGCCACGTTaGTCTCACTCTGTGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLQGQAGPGCLAKSPSLSSRWPR*SHSVAA Trigger: AGCGGCCACAGAGTGAGACCAACGTGGCCAGCGGCT...GCTTAGACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTCTAAGCGCTTCCACAGCTGCCTaGAGCTGCAGCTCTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLQGQAGPGCLAKSPSLSASTAA*SCSSDR Trigger: CCTGTCAGAGCTGCAGCTTCAGGCAGCTGTGGAAGC...GCTTAGACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | GTCATGCCAGCCTTGGCTCCTCCTTGTCGTGGGCTGTGGGCTCCAAGGGCAGGCGTGGGTCTTCTTGCCTaGGCCATCCCCGTTCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VMPALAPPCRGLWAPRAGVGLLA*AIPVQV Trigger: TACCTGAACGGGGATGGCTCAGGCAAGAAGACCCAC...GCCTGCCCTTGGAGCCCACAGCCCACGACAAGGAGGAGCCAAGGCTGGCATGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGTGGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTGCTCTCACAGCAAGGTaGCCGGTAGCAGTCTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GCGLQGQAGPGCLAKSPSALTAR*PVAVYL Trigger: GAGGTAGACTGCTACCGGGCACCTTGCTGTGAGAGC...ACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCCACAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | GTCATGCCAGCCTTGGCTCCTCCTTGTCGTGGGCTGTGGGCTCCAAGGGCAGGCGCTCTCACAGCAAGGTaGCCGGTAGCAGTCTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VMPALAPPCRGLWAPRAGALTAR*PVAVYL Trigger: GAGGTAGACTGCTACCGGGCACCTTGCTGTGAGAGC...GCCTGCCCTTGGAGCCCACAGCCCACGACAAGGAGGAGCCAAGGCTGGCATGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGTGGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTATTGTGGGCTCCCCTTaGAGGAACAGCCAACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCGLQGQAGPGCLAKSPSIVGSP*RNSQHL Trigger: CAGGTGTTGGCTGTTCCTTCAAGGGGAGCCCACAAT...ACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCCACAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTCTAAGCGTGGGTCTTCTTGCCTaGGCCATCCCCGTTCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLQGQAGPGCLAKSPSLSVGLLA*AIPVQV Trigger: TACCTGAACGGGGATGGCTCAGGCAAGAAGACCCAC...GCTTAGACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGTGGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTCAGAGAGACAGGCTGTaGAGCAGAGAACTCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GCGLQGQAGPGCLAKSPSQRDRL*SRELWA Trigger: AGCCCAGAGTTCTCTGCTGCACAGCCTGTCTCTCTG...ACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCCACAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | GTCATGCCAGCCTTGGCTCCTCCTTGTCGTGGGCTGTGGGCTCCAAGGGCAGGCCAGAGAGACAGGCTGTaGAGCAGAGAACTCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VMPALAPPCRGLWAPRAGQRDRL*SRELWA Trigger: AGCCCAGAGTTCTCTGCTGCACAGCCTGTCTCTCTG...GCCTGCCCTTGGAGCCCACAGCCCACGACAAGGAGGAGCCAAGGCTGGCATGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTCCACACACTGACTCGTaGCACCGCTTGGTGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: GCGLQGQAGPGCLAKSPSPHTDS*HRLVTL Trigger: CAATGTCACCAAGCGGTGCCACGAGTCAGTGTGTGG...ACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCCACAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | GTCATGCCAGCCTTGGCTCCTCCTTGTCGTGGGCTGTGGGCTCCAAGGGCAGGCAATTCCACCACCCTCTaGTCCAAGCTCAGGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VMPALAPPCRGLWAPRAGNSTTL*SKLRMC Trigger: GCACATCCTGAGCTTGGAGCAGAGGGTGGTGGAATT...GCCTGCCCTTGGAGCCCACAGCCCACGACAAGGAGGAGCCAAGGCTGGCATGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTCTAAGCAGTCAGAGGGCTTCCTaGGCTCACAGGATGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLQGQAGPGCLAKSPSLSSQRAS*AHRMEV Trigger: AACCTCCATCCTGTGAGCCCAGGAAGCCCTCTGACT...GCTTAGACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTCTAAGCTTCTCCTTCACCAAGTaGTGCAGGGCCAGTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLQGQAGPGCLAKSPSLSFSFTK*CRASSS Trigger: GGAAGAACTGGCCCTGCAGCACTTGGTGAAGGAGAA...GCTTAGACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGCTGTCTAGCTAAGTCCCCCAGTCTAAGCTGGTTCTGTCAGGAGACACCCACTGGCTCTGGTGGATaGAGGCGGCCAGTGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGCLAKSPSLSWFCQETPTGSGG*RRPVPG Trigger: ACCTGGCACTGGCCGCCTCCATCCACCAGAGCCAGT...GGGTGTCTCCTGACAGAACCAGCTTAGACTGGGGGACTTAGCTAGACAGCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGTCTCAACATTCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTGCTTCCACAGCTGCCTaGAGCTGCAGCTCTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLVSTFRSCWHAGLLVSCASTAA*SCSSDR Trigger: CCTGTCAGAGCTGCAGCTTCAGGCAGCTGTGGAAGC...ACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGAATGTTGAGACCAGCCT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | GTCATGCCAGCCTTGGCTCCTCCTTGTCGTGGGCTGTGGGCTCCAAGGGCAGGCCCTCCACTTCCTTGTTaGGGACAGCAACAATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VMPALAPPCRGLWAPRAGPPLPC*GQQQCL Trigger: CAAACATTGTTGCTGTCCTCAACAAGGAAGTGGAGG...GCCTGCCCTTGGAGCCCACAGCCCACGACAAGGAGGAGCCAAGGCTGGCATGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | CACTCTGTGAGCAGTCGTGAAGGTGCTGTGTGTTGGACACCAGCTTCAGACTTGCCGCTGGAAGGAGGCTaGGCTCAGGTCAGGCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSVSSREGAVCWTPASDLPLEGG*AQVRPE Trigger: TTCCGGCCTGACCTGAGCTCAGCCTCCTTCCAGCGG...CAAGTCTGAAGCTGGTGTCCAACACACAGCACCTTCACGACTGCTCACAGAGTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
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| CDS-3UTR CCA 90 bp | TGTACGCACACGTTTCTCCAGCCTCACATCAGCCATAACCAGCATGCTGTGGCGACTGGCTCTGGTGGATaGAGGCGGCCAGTGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CTHTFLQPHISHNQHAVATGSGG*RRPVPG Trigger: ACCTGGCACTGGCCGCCTCCATCCACCAGAGCCAGT...CGCCACAGCATGCTGGTTATGGCTGATGTGAGGCTGGAGAAACGTGTGCGTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGTCTCAACATTCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTTGCTCTCGGTCCAACTaGCTCTGGTGGATGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RLVSTFRSCWHAGLLVSCCSRSN*LWWMEA Trigger: CGCCTCCATCCACCAGAGCCAGTTGGACCGAGAGCA...ACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGAATGTTGAGACCAGCCT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTCTAAGCGGCAGTGTAGAAAGCTaGAGAGAAGAGGCTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLQGQAGPGCLAKSPSLSGSVES*REEADS Trigger: ACTGTCAGCCTCTTCTCTCCAGCTTTCTACACTGCC...GCTTAGACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | TGTACGCACACGTTTCTCCAGCCTCACATCAGCCATAACCAGCATGCTGTGGCGAGAGCGGGCAGCCGCTaGCCACGTTGGTCTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: CTHTFLQPHISHNQHAVARAGSR*PRWSHS Trigger: AGAGTGAGACCAACGTGGCCAGCGGCTGCCCGCTCT...CGCCACAGCATGCTGGTTATGGCTGATGTGAGGCTGGAGAAACGTGTGCGTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | GTCATGCCAGCCTTGGCTCCTCCTTGTCGTGGGCTGTGGGCTCCAAGGGCAGGCAAGGCATCAATAGCATaGTCTCGGTTGTTCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VMPALAPPCRGLWAPRAGKASIA*SRLFWS Trigger: TGACCAGAACAACCGAGAGCATGCTATTGATGCCTT...GCCTGCCCTTGGAGCCCACAGCCCACGACAAGGAGGAGCCAAGGCTGGCATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGTCTCAACATTCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTAGGGCCAGTTCTTCCTaGCTCTCACAGCAAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLVSTFRSCWHAGLLVSCRASSS*LSQQGA Trigger: GGCACCTTGCTGTGAGAGCCAGGAAGAACTGGCCCT...ACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGAATGTTGAGACCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | ACGTTTCTCCAGCCTCACATCAGCCATAACCAGCATGCTGTGGCGCTGAAGTCAAGAGCGGGCAGCCGCTaGCCACGTTGGTCTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TFLQPHISHNQHAVALKSRAGSR*PRWSHS Trigger: AGAGTGAGACCAACGTGGCCAGCGGCTGCCCGCTCT...TGACTTCAGCGCCACAGCATGCTGGTTATGGCTGATGTGAGGCTGGAGAAACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| 3UTR CAA 72 bp | CTGGTAGGAGTGCCCCTCCACTTAGGCCCCATAGCCTaGGCTCAATGTCCAAGCCTCAGGCCTGGCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVGVPLHLGPIA*AQCPSLRPGSF Trigger: AAAAGAGCCAGGCCTGAGGCTTGGACATTGAGCCAAGGCTATGGGGCCTAAGTGGAGGGGCACTCCTACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGTCTCAACATTCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTATTGTGGGCTCCCCTTaGAGGAACAGCCAACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLVSTFRSCWHAGLLVSCIVGSP*RNSQHL Trigger: CAGGTGTTGGCTGTTCCTTCAAGGGGAGCCCACAAT...ACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGAATGTTGAGACCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTAGTCTGTGTGAAAAGACTGAAGCTGCAGCTCTaGCAGGTTCCGCTCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SEAAGMLASWCRVVCVKRLKLQL*QVPLQC Trigger: GCACTGGAGCGGAACCTGTCAGAGCTGCAGCTTCAG...TCTTTTCACACAGACTACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTAGTCTGTGTGAAAAGAGCTTCCACAGCTGCCTaGAGCTGCAGCTCTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SEAAGMLASWCRVVCVKRASTAA*SCSSDR Trigger: CCTGTCAGAGCTGCAGCTTCAGGCAGCTGTGGAAGC...TCTTTTCACACAGACTACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTGAACAGAGAGATGGGGGCATTTTTCCAGTTATGCCCTGACCTCGAGAGACCGCTGGAAGGAGGCTaGGCTCAGGTCAGGCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLNREMGAFFQLCPDLERPLEGG*AQVRPE Trigger: TTCCGGCCTGACCTGAGCTCAGCCTCCTTCCAGCGG...TCTCTCGAGGTCAGGGCATAACTGGAAAAATGCCCCCATCTCTCTGTTCAGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAACCACTGTCGTGCCCTCCTGTTAACAGGCCCAGGCCCTGCAGGTGTGCAATGAGTCGCAGACTGTaGTCAAGCTTGCCCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: FKPLSCPPVNRPRPCRCAMSRRL*SSLPRT Trigger: GGTCCTGGGCAAGCTTGAGCACAGTCTGCGACTCAT...TGCACACCTGCAGGGCCTGGGCCTGTTAACAGGAGGGCACGACAGTGGTTTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | ACGTTTCTCCAGCCTCACATCAGCCATAACCAGCATGCTGTGGCGCTGAAGTCATGCAGCAGAGAACTCTaGGCTCCGATGGGTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TFLQPHISHNQHAVALKSCSREL*APMGPG Trigger: GCCAGGACCCATCGGAGCCCAGAGTTCTCTGCTGCA...TGACTTCAGCGCCACAGCATGCTGGTTATGGCTGATGTGAGGCTGGAGAAACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGTCTCAACATTCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTAGTCAGAGGGCTTCCTaGGCTCACAGGATGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLVSTFRSCWHAGLLVSCSQRAS*AHRMEV Trigger: AACCTCCATCCTGTGAGCCCAGGAAGCCCTCTGACT...ACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGAATGTTGAGACCAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTGTGTGTTGGACACCAGCTTCAGACTTGCATGGTGAGCTCTTTCTTGGGTTCCAACTGGCTCTGGTaGATGGAGGCGGCCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLCVGHQLQTCMVSSFLGSNWLW*MEAASA Trigger: GGCACTGGCCGCCTCCATCCACCAGAGCCAGTTGGA...ACCCAAGAAAGAGCTCACCATGCAAGTCTGAAGCTGGTGTCCAACACACAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | CCAGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCAGCCGCTGGCCACGTTaGTCTCACTCTGTGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PDAARKHFPGQFLGLPVCSRWPR*SHSVAA Trigger: AGCGGCCACAGAGTGAGACCAACGTGGCCAGCGGCT...GCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | CACTTAGGCCCCATAGCCTTGGCTCAATGTCCAAGCCTCAGGCCTGGCTCTTTTTGGGAGGTAGCCTCATaGTCCTGCATGGATTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLGPIALAQCPSLRPGSFWEVAS*SCMDCG Trigger: CCCACAATCCATGCAGGAGCATGAGGCTACCTCCCA...AAAAGAGCCAGGCCTGAGGCTTGGACATTGAGCCAAGGCTATGGGGCCTAAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | CACTTAGGCCCCATAGCCTTGGCTCAATGTCCAAGCCTCAGGCCTGGCTCTTTTATGAGTCGCAGACTGTaGTCAAGCTTGCCCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: HLGPIALAQCPSLRPGSFMSRRL*SSLPRT Trigger: GGTCCTGGGCAAGCTTGAGCACAGTCTGCGACTCAT...AAAAGAGCCAGGCCTGAGGCTTGGACATTGAGCCAAGGCTATGGGGCCTAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | TGTACGCACACGTTTCTCCAGCCTCACATCAGCCATAACCAGCATGCTGTGGCGATGAGTCGCAGACTGTaGTCAAGCTTGCCCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: CTHTFLQPHISHNQHAVAMSRRL*SSLPRT Trigger: GGTCCTGGGCAAGCTTGAGCACAGTCTGCGACTCAT...CGCCACAGCATGCTGGTTATGGCTGATGTGAGGCTGGAGAAACGTGTGCGTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS-3UTR CCA 90 bp | CTCCTGGTGTCGTGTAGTCTGTGTGAAAAGAGCACTTCTGTCTTCTCCTCCACTAACTCTGGGCTCCGATaGGTCCTGGCAGGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVSCSLCEKSTSVFSSTNSGLR*VLAGSR Trigger: CCTGCTCCCTGCCAGGACCCATCGGAGCCCAGAGTT...AGTGGAGGAGAAGACAGAAGTGCTCTTTTCACACAGACTACACGACACCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS-3UTR CCA 90 bp | TCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTAGTCTGTGTGAAAAGAAGGGCCAGTTCTTCCTaGCTCTCACAGCAAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SEAAGMLASWCRVVCVKRRASSS*LSQQGA Trigger: GGCACCTTGCTGTGAGAGCCAGGAAGAACTGGCCCT...TCTTTTCACACAGACTACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS-3UTR CCA 90 bp | CTCCTGGTGTCGTGTAGTCTGTGTGAAAAGAGCACTTCTGTCTTCTCCTCCACTGCGGCCAGTGCCAGGTaGGAAGCCTCCACTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLVSCSLCEKSTSVFSSTAASAR*EASTSL Trigger: CAAGGAAGTGGAGGCTTCCCACCTGGCACTGGCCGC...AGTGGAGGAGAAGACAGAAGTGCTCTTTTCACACAGACTACACGACACCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS-3UTR CCA 90 bp | AACAGAGAGATGGGGGCATTTTTCCAGTTATGCCCTGACCTCGAGAGAATGTCCGCGGCCAGTGCCAGGTaGGAAGCCTCCACTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NREMGAFFQLCPDLERMSAASAR*EASTSL Trigger: CAAGGAAGTGGAGGCTTCCCACCTGGCACTGGCCGC...GGACATTCTCTCGAGGTCAGGGCATAACTGGAAAAATGCCCCCATCTCTCTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS-3UTR CCA 90 bp | CACTTAGGCCCCATAGCCTTGGCTCAATGTCCAAGCCTCAGGCCTGGCTCTTTTCCACACACTGACTCGTaGCACCGCTTGGTGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: HLGPIALAQCPSLRPGSFPHTDS*HRLVTL Trigger: CAATGTCACCAAGCGGTGCCACGAGTCAGTGTGTGG...AAAAGAGCCAGGCCTGAGGCTTGGACATTGAGCCAAGGCTATGGGGCCTAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS-3UTR CCA 90 bp | TGTACGCACACGTTTCTCCAGCCTCACATCAGCCATAACCAGCATGCTGTGGCGCCACACACTGACTCGTaGCACCGCTTGGTGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: CTHTFLQPHISHNQHAVAPHTDS*HRLVTL Trigger: CAATGTCACCAAGCGGTGCCACGAGTCAGTGTGTGG...CGCCACAGCATGCTGGTTATGGCTGATGTGAGGCTGGAGAAACGTGTGCGTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS-3UTR CCA 90 bp | AACAGAGAGATGGGGGCATTTTTCCAGTTATGCCCTGACCTCGAGAGAATGTCCAGAGCGGGCAGCCGCTaGCCACGTTGGTCTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: NREMGAFFQLCPDLERMSRAGSR*PRWSHS Trigger: AGAGTGAGACCAACGTGGCCAGCGGCTGCCCGCTCT...GGACATTCTCTCGAGGTCAGGGCATAACTGGAAAAATGCCCCCATCTCTCTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS-3UTR TCA 90 bp | AGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGTCTGGAGAGAAGAGGCTaGCAGTCCGGCCACACACTG | + |
|
Preference number: 4 (lower is better) Translates to: RCSQKAFPRAVSGFTCLRLERRG*QSGHTL Trigger: CAGTGTGTGGCCGGACTGTCAGCCTCTTCTCTCCAG...ACGCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | ACGTTTCTCCAGCCTCACATCAGCCATAACCAGCATGCTGTGGCGCTGAAGTCATGGGAGGTAGCCTCATaGTCCTGCATGGATTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFLQPHISHNQHAVALKSWEVAS*SCMDCG Trigger: CCCACAATCCATGCAGGAGCATGAGGCTACCTCCCA...TGACTTCAGCGCCACAGCATGCTGGTTATGGCTGATGTGAGGCTGGAGAAACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS-3UTR GCA 90 bp | ACGTTTCTCCAGCCTCACATCAGCCATAACCAGCATGCTGTGGCGCTGAAGTCATCCTTCACCAAGTGCTaGAGGGCCAGTTCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TFLQPHISHNQHAVALKSSFTKC*RASSSW Trigger: CCAGGAAGAACTGGCCCTGCAGCACTTGGTGAAGGA...TGACTTCAGCGCCACAGCATGCTGGTTATGGCTGATGTGAGGCTGGAGAAACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | TGTACGCACACGTTTCTCCAGCCTCACATCAGCCATAACCAGCATGCTGTGGCGTTCTCCTTCACCAAGTaGTGCAGGGCCAGTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CTHTFLQPHISHNQHAVAFSFTK*CRASSS Trigger: GGAAGAACTGGCCCTGCAGCACTTGGTGAAGGAGAA...CGCCACAGCATGCTGGTTATGGCTGATGTGAGGCTGGAGAAACGTGTGCGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTAGTCTGTGTGAAAAGATCCAAGCTCAGGATGTaGTCTCGGTCCAACTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SEAAGMLASWCRVVCVKRSKLRM*SRSNWL Trigger: GAGCCAGTTGGACCGAGAGCACATCCTGAGCTTGGA...TCTTTTCACACAGACTACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTCCCCTCAGAAGTGCGCCATTAAAGGTGTGGGGATGCAGCTAAGCAGGAATTCCACCACCCTCTaGTCCAAGCTCAGGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSSPQKCAIKGVGMQLSRNSTTL*SKLRMC Trigger: GCACATCCTGAGCTTGGAGCAGAGGGTGGTGGAATT...CCTGCTTAGCTGCATCCCCACACCTTTAATGGCGCACTTCTGAGGGGAGGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGTCTCAACATTCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTGACTGTGCTCAAGCTTaGCCAGGACCTGGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLVSTFRSCWHAGLLVSCDCAQA*PGPGLF Trigger: AAAAAGACCAGGTCCTGGGCAAGCTTGAGCACAGTC...ACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGAATGTTGAGACCAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | ACGTTTCTCCAGCCTCACATCAGCCATAACCAGCATGCTGTGGCGCTGAAGTCAACAGGTGGGTCTTCTTaGCTGAGCCATCCCCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TFLQPHISHNQHAVALKSTGGSS*LSHPRS Trigger: TGAACGGGGATGGCTCAGGCAAGAAGACCCACCTGT...TGACTTCAGCGCCACAGCATGCTGGTTATGGCTGATGTGAGGCTGGAGAAACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | AACAGAGAGATGGGGGCATTTTTCCAGTTATGCCCTGACCTCGAGAGAATGTCCGCGTGCTTGGGTGACTaGAGCTTGCTGAGGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NREMGAFFQLCPDLERMSACLGD*SLLRGK Trigger: CTTCCCCCTCAGCAAGCTGCAGTCACCCAAGCACGC...GGACATTCTCTCGAGGTCAGGGCATAACTGGAAAAATGCCCCCATCTCTCTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | AGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGTGCGTGCTTGGGTGACTaGAGCTTGCTGAGGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RCSQKAFPRAVSGFTCLRACLGD*SLLRGK Trigger: CTTCCCCCTCAGCAAGCTGCAGTCACCCAAGCACGC...ACGCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTAGTCTGTGTGAAAAGAAGTCAGAGGGCTTCCTaGGCTCACAGGATGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SEAAGMLASWCRVVCVKRSQRAS*AHRMEV Trigger: AACCTCCATCCTGTGAGCCCAGGAAGCCCTCTGACT...TCTTTTCACACAGACTACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGCACAGTGCCTCTCACACTGTGTGAAGACAAGGTTCTCCTCCCCTCAGAAAGGGCCAGTTCTTCCTaGCTCTCACAGCAAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ESTVPLTLCEDKVLLPSERASSS*LSQQGA Trigger: GGCACCTTGCTGTGAGAGCCAGGAAGAACTGGCCCT...TTCTGAGGGGAGGAGAACCTTGTCTTCACACAGTGTGAGAGGCACTGTGCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTGGTGTCGTGTAGTCTGTGTGAAAAGAGCACTTCTGTCTTCTCCTCCACTTGCTCTCGGTCCAACTaGCTCTGGTGGATGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLVSCSLCEKSTSVFSSTCSRSN*LWWMEA Trigger: CGCCTCCATCCACCAGAGCCAGTTGGACCGAGAGCA...AGTGGAGGAGAAGACAGAAGTGCTCTTTTCACACAGACTACACGACACCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | TCAAAGATCTCCAGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTCTGAAGCTGCAGCTCTaGCAGGTTCCGCTCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKISRCSQKAFPRAVSGFLKLQL*QVPLQC Trigger: GCACTGGAGCGGAACCTGTCAGAGCTGCAGCTTCAG...AAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCTGGAGATCTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGTCTCAACATTCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTCCTCCACTTCCTTGTTaGGGACAGCAACAATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLVSTFRSCWHAGLLVSCPPLPC*GQQQCL Trigger: CAAACATTGTTGCTGTCCTCAACAAGGAAGTGGAGG...ACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGAATGTTGAGACCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | AGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGTGCTCTCACAGCAAGGTaGCCGGTAGCAGTCTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RCSQKAFPRAVSGFTCLRALTAR*PVAVYL Trigger: GAGGTAGACTGCTACCGGGCACCTTGCTGTGAGAGC...ACGCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCCACACCCACATCCTCCACATATTTCAGGCTGGTTTGAGGCTCACTTCACAGGTGGGTCTTCTTaGCTGAGCCATCCCCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPPHPHPPHISGWFEAHFTGGSS*LSHPRS Trigger: TGAACGGGGATGGCTCAGGCAAGAAGACCCACCTGT...GAAGTGAGCCTCAAACCAGCCTGAAATATGTGGAGGATGTGGGTGTGGAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGTCGTGTAGTCTGTGTGAAAAGAGCACTTCTGTCTTCTCCTCCACTCTGTGCGTGCTTGGGTGACTaGAGCTTGCTGAGGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WCRVVCVKRALLSSPPLCACLGD*SLLRGK Trigger: CTTCCCCCTCAGCAAGCTGCAGTCACCCAAGCACGC...ACAGAGTGGAGGAGAAGACAGAAGTGCTCTTTTCACACAGACTACACGACACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | CATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGTGTCTGTTAACATAGGAAACTCTGGGCTCCGATaGGTCCTGGCAGGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HFPGQFLGLPVCVSVNIGNSGLR*VLAGSR Trigger: CCTGCTCCCTGCCAGGACCCATCGGAGCCCAGAGTT...TCCTATGTTAACAGACACGCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | CCAGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCCCTGGGCTCACAGGATaGAGGTTGTCTGCTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PDAARKHFPGQFLGLPVCPGLTG*RLSALH Trigger: ATGCAGAGCAGACAACCTCCATCCTGTGAGCCCAGG...GCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGTGTCTGTTAACATAGGAACTAGCCGCTGGCCACGTTaGTCTCACTCTGTGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPGQFLGLPVCVSVNIGTSRWPR*SHSVAA Trigger: AGCGGCCACAGAGTGAGACCAACGTGGCCAGCGGCT...AGTTCCTATGTTAACAGACACGCAAACAGGTAAACCCAGAAACTGCCCTGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| 3UTR CAA 72 bp | CGTGAAGGTGCTGTGTGTTGGACACCAGCTTCAGACTaGCATGGTGAGCTCTTTCTTGGGTGTGCTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: REGAVCWTPASD*HGELFLGCASV Trigger: GACAGAAGCACACCCAAGAAAGAGCTCACCATGCAAGTCTGAAGCTGGTGTCCAACACACAGCACCTTCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| 3UTR CAA 72 bp | GATTTCTGTGTTCTGGCCAGTTGGCCTATCTATGTTTaGGCTGGTCCAGCCTTCCTTTCATCACCCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DFCVLASWPIYV*AGPAFLSSPSP Trigger: GGGGCTGGGTGATGAAAGGAAGGCTGGACCAGCCAAAACATAGATAGGCCAACTGGCCAGAACACAGAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGTGTCTGTTAACATAGGAACTCTGGAGAGAAGAGGCTaGCAGTCCGGCCACACACTG | + |
|
Preference number: 4 (lower is better) Translates to: FPGQFLGLPVCVSVNIGTLERRG*QSGHTL Trigger: CAGTGTGTGGCCGGACTGTCAGCCTCTTCTCTCCAG...AGTTCCTATGTTAACAGACACGCAAACAGGTAAACCCAGAAACTGCCCTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGTCGTGTAGTCTGTGTGAAAAGAGCACTTCTGTCTTCTCCTCCACTCTGTGTGGGTCTTCTTGCCTaGGCCATCCCCGTTCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: WCRVVCVKRALLSSPPLCVGLLA*AIPVQV Trigger: TACCTGAACGGGGATGGCTCAGGCAAGAAGACCCAC...ACAGAGTGGAGGAGAAGACAGAAGTGCTCTTTTCACACAGACTACACGACACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | AACAGAGAGATGGGGGCATTTTTCCAGTTATGCCCTGACCTCGAGAGAATGTCCCAGAGAGACAGGCTGTaGAGCAGAGAACTCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NREMGAFFQLCPDLERMSQRDRL*SRELWA Trigger: AGCCCAGAGTTCTCTGCTGCACAGCCTGTCTCTCTG...GGACATTCTCTCGAGGTCAGGGCATAACTGGAAAAATGCCCCCATCTCTCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | AGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGTTCCTTCACCAAGTGCTaGAGGGCCAGTTCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RCSQKAFPRAVSGFTCLRSFTKC*RASSSW Trigger: CCAGGAAGAACTGGCCCTGCAGCACTTGGTGAAGGA...ACGCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | AGTCTGAACAGAGAGATGGGGGCATTTTTCCAGTTATGCCCTGACCTCGAGAGATCCAAGCTCAGGATGTaGTCTCGGTCCAACTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLNREMGAFFQLCPDLERSKLRM*SRSNWL Trigger: GAGCCAGTTGGACCGAGAGCACATCCTGAGCTTGGA...TCTCTCGAGGTCAGGGCATAACTGGAAAAATGCCCCCATCTCTCTGTTCAGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | ACGTTTCTCCAGCCTCACATCAGCCATAACCAGCATGCTGTGGCGCTGAAGTCAGACTGTGCTCAAGCTTaGCCAGGACCTGGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TFLQPHISHNQHAVALKSDCAQA*PGPGLF Trigger: AAAAAGACCAGGTCCTGGGCAAGCTTGAGCACAGTC...TGACTTCAGCGCCACAGCATGCTGGTTATGGCTGATGTGAGGCTGGAGAAACGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTAGTCTGTGTGAAAAGAGACTGTGCTCAAGCTTaGCCAGGACCTGGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SEAAGMLASWCRVVCVKRDCAQA*PGPGLF Trigger: AAAAAGACCAGGTCCTGGGCAAGCTTGAGCACAGTC...TCTTTTCACACAGACTACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | TATTACATGGGTTCTAGTGATCAAACTCAGGCCCACACAGACAGAGACATCTCAAACTCTGGGCTCCGATaGGTCCTGGCAGGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YYMGSSDQTQAHTDRDISNSGLR*VLAGSR Trigger: CCTGCTCCCTGCCAGGACCCATCGGAGCCCAGAGTT...TGAGATGTCTCTGTCTGTGTGGGCCTGAGTTTGATCACTAGAACCCATGTAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201690.2 |
||
| CDS-3UTR CCA 90 bp | AGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGTCCTGGGCTCACAGGATaGAGGTTGTCTGCTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RCSQKAFPRAVSGFTCLRPGLTG*RLSALH Trigger: ATGCAGAGCAGACAACCTCCATCCTGTGAGCCCAGG...ACGCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGTGTCTGTTAACATAGGAACTTGCTCTCGGTCCAACTaGCTCTGGTGGATGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FPGQFLGLPVCVSVNIGTCSRSN*LWWMEA Trigger: CGCCTCCATCCACCAGAGCCAGTTGGACCGAGAGCA...AGTTCCTATGTTAACAGACACGCAAACAGGTAAACCCAGAAACTGCCCTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | CCAGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCCTGCAAAGGGGCACATaGTTTCAGCCTCAGCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: PDAARKHFPGQFLGLPVCLQRGT*FQPQLH Trigger: ATGTAGCTGAGGCTGAAATCATGTGCCCCTTTGCAG...GCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGTCGTGTAGTCTGTGTGAAAAGAGCACTTCTGTCTTCTCCTCCACTCTGTATTGTGGGCTCCCCTTaGAGGAACAGCCAACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: WCRVVCVKRALLSSPPLCIVGSP*RNSQHL Trigger: CAGGTGTTGGCTGTTCCTTCAAGGGGAGCCCACAAT...ACAGAGTGGAGGAGAAGACAGAAGTGCTCTTTTCACACAGACTACACGACACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | AGTCTGAACAGAGAGATGGGGGCATTTTTCCAGTTATGCCCTGACCTCGAGAGATTCTCCTTCACCAAGTaGTGCAGGGCCAGTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLNREMGAFFQLCPDLERFSFTK*CRASSS Trigger: GGAAGAACTGGCCCTGCAGCACTTGGTGAAGGAGAA...TCTCTCGAGGTCAGGGCATAACTGGAAAAATGCCCCCATCTCTCTGTTCAGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGTGTGTTGGACACCAGCTTCAGACTTGCATGGTGAGCTCTTTCTTGGGTAGTACCATCAAAGGATaGCTCCTCCATGAGTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLCVGHQLQTCMVSSFLGSTIKG*LLHESQ Trigger: CTGCGACTCATGGAGGAGGCATCCTTTGATGGTACT...ACCCAAGAAAGAGCTCACCATGCAAGTCTGAAGCTGGTGTCCAACACACAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGTGTCTGTTAACATAGGAACTTCCTTCACCAAGTGCTaGAGGGCCAGTTCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPGQFLGLPVCVSVNIGTSFTKC*RASSSW Trigger: CCAGGAAGAACTGGCCCTGCAGCACTTGGTGAAGGA...AGTTCCTATGTTAACAGACACGCAAACAGGTAAACCCAGAAACTGCCCTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGTCGTGTAGTCTGTGTGAAAAGAGCACTTCTGTCTTCTCCTCCACTCTGTAATTCCACCACCCTCTaGTCCAAGCTCAGGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WCRVVCVKRALLSSPPLCNSTTL*SKLRMC Trigger: GCACATCCTGAGCTTGGAGCAGAGGGTGGTGGAATT...ACAGAGTGGAGGAGAAGACAGAAGTGCTCTTTTCACACAGACTACACGACACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | AGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGTAGTACCATCAAAGGATaGCTCCTCCATGAGTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RCSQKAFPRAVSGFTCLRSTIKG*LLHESQ Trigger: CTGCGACTCATGGAGGAGGCATCCTTTGATGGTACT...ACGCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | CATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGTGTCTGTTAACATAGGACCTGGGCTCACAGGATaGAGGTTGTCTGCTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HFPGQFLGLPVCVSVNIGPGLTG*RLSALH Trigger: ATGCAGAGCAGACAACCTCCATCCTGTGAGCCCAGG...TCCTATGTTAACAGACACGCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGTGATCAAACTCAGGCCCACACAGACAGAGACATCTCATTAGTCTCCACACCTGGGCTCACAGGATaGAGGTTGTCTGCTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSDQTQAHTDRDISLVSTPGLTG*RLSALH Trigger: ATGCAGAGCAGACAACCTCCATCCTGTGAGCCCAGG...TGTGGAGACTAATGAGATGTCTCTGTCTGTGTGGGCCTGAGTTTGATCACTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201690.2 |
||
| CDS-3UTR CCA 90 bp | AGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGTGGCAGTGTAGAAAGCTaGAGAGAAGAGGCTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RCSQKAFPRAVSGFTCLRGSVES*REEADS Trigger: ACTGTCAGCCTCTTCTCTCCAGCTTTCTACACTGCC...ACGCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTGGTGTCGTGTAGTCTGTGTGAAAAGAGCACTTCTGTCTTCTCCTCCACTGGCAGTGTAGAAAGCTaGAGAGAAGAGGCTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLVSCSLCEKSTSVFSSTGSVES*REEADS Trigger: ACTGTCAGCCTCTTCTCTCCAGCTTTCTACACTGCC...AGTGGAGGAGAAGACAGAAGTGCTCTTTTCACACAGACTACACGACACCAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | TCAAAGATCTCCAGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTCTGCAAAGGGGCACATaGTTTCAGCCTCAGCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: SKISRCSQKAFPRAVSGFLQRGT*FQPQLH Trigger: ATGTAGCTGAGGCTGAAATCATGTGCCCCTTTGCAG...AAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCTGGAGATCTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | AACAGAGAGATGGGGGCATTTTTCCAGTTATGCCCTGACCTCGAGAGAATGTCCCCTCCACTTCCTTGTTaGGGACAGCAACAATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NREMGAFFQLCPDLERMSPPLPC*GQQQCL Trigger: CAAACATTGTTGCTGTCCTCAACAAGGAAGTGGAGG...GGACATTCTCTCGAGGTCAGGGCATAACTGGAAAAATGCCCCCATCTCTCTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | TGTACGCACACGTTTCTCCAGCCTCACATCAGCCATAACCAGCATGCTGTGGCGTGTCCACAATGCATTTaGGGAACATTGTGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CTHTFLQPHISHNQHAVACPQCI*GTLCHL Trigger: AAGATGACACAATGTTCCTCAAATGCATTGTGGACA...CGCCACAGCATGCTGGTTATGGCTGATGTGAGGCTGGAGAAACGTGTGCGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | CCAGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGACAGCAACAATGTTTaGAAACACACGCAGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PDAARKHFPGQFLGLPVCDSNNV*KHTQLL Trigger: GAGAAGCTGCGTGTGTTTGCAAACATTGTTGCTGTC...GCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | TCAAAGATCTCCAGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTAGTACCATCAAAGGATaGCTCCTCCATGAGTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKISRCSQKAFPRAVSGFSTIKG*LLHESQ Trigger: CTGCGACTCATGGAGGAGGCATCCTTTGATGGTACT...AAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCTGGAGATCTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | CATAGCTTTTATTACATGGGTTCTAGTGATCAAACTCAGGCCCACACAGACAGACAGAGAGACAGGCTGTaGAGCAGAGAACTCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSFYYMGSSDQTQAHTDRQRDRL*SRELWA Trigger: AGCCCAGAGTTCTCTGCTGCACAGCCTGTCTCTCTG...TCTGTCTGTGTGGGCCTGAGTTTGATCACTAGAACCCATGTAATAAAAGCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201690.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTGGTGTCGTGTAGTCTGTGTGAAAAGAGCACTTCTGTCTTCTCCTCCACTAGGATGGAGGTTGTCTaGTCTGCATTTAGGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLVSCSLCEKSTSVFSSTRMEVV*SAFRTD Trigger: ATCTGTCCTAAATGCAGAGCAGACAACCTCCATCCT...AGTGGAGGAGAAGACAGAAGTGCTCTTTTCACACAGACTACACGACACCAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGTTTACCTGTTTGCGTGTCTGTTAACATAGGAACTCAGTCCAGGGCAGGTGACAGCAACAATGTTTaGAAACACACGCAGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLPVCVSVNIGTQSRAGDSNNV*KHTQLL Trigger: GAGAAGCTGCGTGTGTTTGCAAACATTGTTGCTGTC...ACCTGCCCTGGACTGAGTTCCTATGTTAACAGACACGCAAACAGGTAAACCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CCA 90 bp | ATAGCTTTTATTACATGGGTTCTAGTGATCAAACTCAGGCCCACACAGACAGAGAGTCAGAGGGCTTCCTaGGCTCACAGGATGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IAFITWVLVIKLRPTQTESQRAS*AHRMEV Trigger: AACCTCCATCCTGTGAGCCCAGGAAGCCCTCTGACT...CTCTGTCTGTGTGGGCCTGAGTTTGATCACTAGAACCCATGTAATAAAAGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201690.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAGATCTCCAGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTGACAGCAACAATGTTTaGAAACACACGCAGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKISRCSQKAFPRAVSGFDSNNV*KHTQLL Trigger: GAGAAGCTGCGTGTGTTTGCAAACATTGTTGCTGTC...AAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCTGGAGATCTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTGAACAGAGAGATGGGGGCATTTTTCCAGTTATGCCCTGACCTCGAGAGATGTCCACAATGCATTTaGGGAACATTGTGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLNREMGAFFQLCPDLERCPQCI*GTLCHL Trigger: AAGATGACACAATGTTCCTCAAATGCATTGTGGACA...TCTCTCGAGGTCAGGGCATAACTGGAAAAATGCCCCCATCTCTCTGTTCAGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | AATCAGGGATTCAGTGTCATTCTTGACTATATACTGAGTTTGAAACCAGTCTGGTGGGAGGTAGCCTCATaGTCCTGCATGGATTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NQGFSVILDYILSLKPVWWEVAS*SCMDCG Trigger: CCCACAATCCATGCAGGAGCATGAGGCTACCTCCCA...CCAGACTGGTTTCAAACTCAGTATATAGTCAAGAATGACACTGAATCCCTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAGAATCAGGGATTCAGTGTCATTCTTGACTATATACTGAGTTTGAAACCATCCAAGCTCAGGATGTaGTCTCGGTCCAACTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QENQGFSVILDYILSLKPSKLRM*SRSNWL Trigger: GAGCCAGTTGGACCGAGAGCACATCCTGAGCTTGGA...TGGTTTCAAACTCAGTATATAGTCAAGAATGACACTGAATCCCTGATTCTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| CDS-3UTR GCA 90 bp | CATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGTGTCTGTTAACATAGGAAAGGCATCAATAGCATaGTCTCGGTTGTTCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HFPGQFLGLPVCVSVNIGKASIA*SRLFWS Trigger: TGACCAGAACAACCGAGAGCATGCTATTGATGCCTT...TCCTATGTTAACAGACACGCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | GTCATGCCAGCCTTGGCTCCTCCTTGTCGTGGGCTGTGGGCTCCAAGGGCAGGCGACAGGTGGGTCTTCTaGCCTGAGCCATCCCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VMPALAPPCRGLWAPRAGDRWVF*PEPSPF Trigger: GAACGGGGATGGCTCAGGCAAGAAGACCCACCTGTC...GCCTGCCCTTGGAGCCCACAGCCCACGACAAGGAGGAGCCAAGGCTGGCATGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTTTGGGTGACTGCAGCTaGCTGAGGGGGAAGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GCGLQGQAGPGCLAKSPSLGDCS*LRGKKS Trigger: GCTCTTCTTCCCCCTCAGCAAGCTGCAGTCACCCAA...ACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCCACAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS TCA 90 bp | GCCGCTGGCCACGTTGGTCTCACTCTGTGGCCGCTGGAAGGAGGCTaGGCTCAGGTCAGGCCGGAAGGCATCAATAGCATGCTCTCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AAGHVGLTLWPLEGG*AQVRPEGINSMLSV Trigger: AACCGAGAGCATGCTATTGATGCCTTCCGGCCTGACCTGAGCTCAGCCTCCTTCCAGCGGCCACAGAGTGAGACCAACGTGGCCAGCGGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CCA 90 bp | CTCTGCTCCAAGCTCAGGATGTGCTCTCGGTCCAACTGGCTCTGGTaGATGGAGGCGGCCAGTGCCAGGTGGGAAGCCTCCACTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LCSKLRMCSRSNWLW*MEAASARWEASTSL Trigger: CAAGGAAGTGGAGGCTTCCCACCTGGCACTGGCCGCCTCCATCCACCAGAGCCAGTTGGACCGAGAGCACATCCTGAGCTTGGAGCAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | GTCATGCCAGCCTTGGCTCCTCCTTGTCGTGGGCTGTGGGCTCCAAGGGCAGGCATGCTCCTGCATGGATaGTGGGCTCCCCTTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VMPALAPPCRGLWAPRAGMLLHG*WAPLEG Trigger: TCCTTCAAGGGGAGCCCACAATCCATGCAGGAGCAT...GCCTGCCCTTGGAGCCCACAGCCCACGACAAGGAGGAGCCAAGGCTGGCATGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | GTCATGCCAGCCTTGGCTCCTCCTTGTCGTGGGCTGTGGGCTCCAAGGGCAGGCAGACTGTGCTCAAGCTaGCCCAGGACCTGGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VMPALAPPCRGLWAPRAGRLCSS*PRTWSF Trigger: AAAAGACCAGGTCCTGGGCAAGCTTGAGCACAGTCT...GCCTGCCCTTGGAGCCCACAGCCCACGACAAGGAGGAGCCAAGGCTGGCATGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS GCA 90 bp | ACCGCCAGCAGCAGGTACAGGTGGGAGGACTGGGAGGTAGCCTCATaGTCCTGCATGGATTGTGGGCTCCCCTTGAAGGAACAGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: TASSRYRWEDWEVAS*SCMDCGLPLKEQPT Trigger: TGTTGGCTGTTCCTTCAAGGGGAGCCCACAATCCATGCAGGAGCATGAGGCTACCTCCCAGTCCTCCCACCTGTACCTGCTGCTGGCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CCA 90 bp | CAGCTGCCTGAAGCTGCAGCTCTGACAGGTTCCGCTCCAGTGCCATaGGTGCAGACCCTAGGTTGGAGCCTGGTGAGGATTTCCACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QLPEAAALTGSAPVP*VQTLGWSLVRISTP Trigger: AGGAGTGGAAATCCTCACCAGGCTCCAACCTAGGGTCTGCACCCATGGCACTGGAGCGGAACCTGTCAGAGCTGCAGCTTCAGGCAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS GCA 90 bp | AGCAGCAGGTACAGGTGGGAGGACTGGGAGGTAGCCTCATGCTCCTaGATGGATTGTGGGCTCCCCTTGAAGGAACAGCCAACACCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSRYRWEDWEVASCS*MDCGLPLKEQPTPA Trigger: TGCAGGTGTTGGCTGTTCCTTCAAGGGGAGCCCACAATCCATGCAGGAGCATGAGGCTACCTCCCAGTCCTCCCACCTGTACCTGCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CCA 90 bp | CAGGTGGGAGGACTGGGAGGTAGCCTCATGCTCCTGCATGGATTGTaGGCTCCCCTTGAAGGAACAGCCAACACCTGCAAAGGGGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: QVGGLGGSLMLLHGL*APLEGTANTCKGAH Trigger: ATGTGCCCCTTTGCAGGTGTTGGCTGTTCCTTCAAGGGGAGCCCACAATCCATGCAGGAGCATGAGGCTACCTCCCAGTCCTCCCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CCA 90 bp | TTCCACTCCTTTAAGACCGCCAGCAGCAGGTACAGGTGGGAGGACTaGGAGGTAGCCTCATGCTCCTGCATGGATTGTGGGCTCCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FHSFKTASSRYRWED*EVASCSCMDCGLPL Trigger: CAAGGGGAGCCCACAATCCATGCAGGAGCATGAGGCTACCTCCCAGTCCTCCCACCTGTACCTGCTGCTGGCGGTCTTAAAGGAGTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CCA 90 bp | GCTCTGACAGGTTCCGCTCCAGTGCCATGGGTGCAGACCCTAGGTTaGAGCCTGGTGAGGATTTCCACTCCTTTAAGACCGCCAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ALTGSAPVPWVQTLG*SLVRISTPLRPPAA Trigger: TGCTGCTGGCGGTCTTAAAGGAGTGGAAATCCTCACCAGGCTCCAACCTAGGGTCTGCACCCATGGCACTGGAGCGGAACCTGTCAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTCTAAGCGAAGCCTCCACTTCCTaGTTGAGGACAGCAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: GLQGQAGPGCLAKSPSLSEASTS*LRTATM Trigger: CATTGTTGCTGTCCTCAACAAGGAAGTGGAGGCTTC...GCTTAGACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS GCA 90 bp | AGATCCGATCCTCATCATCTCTCAGGTTCTCAGAGAGACAGGCTGTaGAGCAGAGAACTCTGGGCTCCGATGGGTCCTGGCAGGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RSDPHHLSGSQRDRL*SRELWAPMGPGREQ Trigger: CTGCTCCCTGCCAGGACCCATCGGAGCCCAGAGTTCTCTGCTGCACAGCCTGTCTCTCTGAGAACCTGAGAGATGATGAGGATCGGATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 ENSMUST00000201690.2 |
||
| CDS CCA 90 bp | GGTGAGGATTTCCACTCCTTTAAGACCGCCAGCAGCAGGTACAGGTaGGAGGACTGGGAGGTAGCCTCATGCTCCTGCATGGATTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GEDFHSFKTASSRYR*EDWEVASCSCMDCG Trigger: CCCACAATCCATGCAGGAGCATGAGGCTACCTCCCAGTCCTCCCACCTGTACCTGCTGCTGGCGGTCTTAAAGGAGTGGAAATCCTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTCTAAGCGGACAGCAACAATGTTaGCAAACACACGCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLQGQAGPGCLAKSPSLSGQQQC*QTHAAS Trigger: AGAAGCTGCGTGTGTTTGCAAACATTGTTGCTGTCC...GCTTAGACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTCCAAGGGCAGGCAGGGCCTGGCTGTCTAGCTAAGTCCCCCAGTCTAAGCGCCTCCACTTCCTTGTaGAGGACAGCAACAATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GLQGQAGPGCLAKSPSLSASTSL*RTATMF Trigger: AAACATTGTTGCTGTCCTCAACAAGGAAGTGGAGGC...GCTTAGACTGGGGGACTTAGCTAGACAGCCAGGCCCTGCCTGCCCTTGGAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS TCA 90 bp | GGATGGAGGCGGCCAGTGCCAGGTGGGAAGCCTCCACTTCCTTGTTaGGGACAGCAACAATGTTTGCAAACACACGCAGCTTCTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GWRRPVPGGKPPLPC*GQQQCLQTHAASPP Trigger: TGGAGGAGAAGCTGCGTGTGTTTGCAAACATTGTTGCTGTCCTCAACAAGGAAGTGGAGGCTTCCCACCTGGCACTGGCCGCCTCCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | GTCATGCCAGCCTTGGCTCCTCCTTGTCGTGGGCTGTGGGCTCCAAGGGCAGGCGTGTCCACAATGCATTaGAGGAACATTGTGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: VMPALAPPCRGLWAPRAGVSTMH*RNIVSS Trigger: AGATGACACAATGTTCCTCAAATGCATTGTGGACAC...GCCTGCCCTTGGAGCCCACAGCCCACGACAAGGAGGAGCCAAGGCTGGCATGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | CCAGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGACAGGTGGGTCTTCTaGCCTGAGCCATCCCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PDAARKHFPGQFLGLPVCDRWVF*PEPSPF Trigger: GAACGGGGATGGCTCAGGCAAGAAGACCCACCTGTC...GCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTGGTCTCAACATTCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTAGCATAAAGGTGACCTaGTTCCTGAAAGGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLVSTFRSCWHAGLLVSCSIKVT*FLKGQG Trigger: GCCCTGGCCTTTCAGGAACAAGGTCACCTTTATGCT...ACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGAATGTTGAGACCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS TCA 90 bp | AGTGTAGAAAGCTGGAGAGAAGAGGCTGACAGTCCGGCCACACACTaGCTCGTGGCACCGCTTGGTGACATTGGTGATCTTCCACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SVESWREEADSPATH*LVAPLGDIGDLPQE Trigger: TTCCTGTGGAAGATCACCAATGTCACCAAGCGGTGCCACGAGTCAGTGTGTGGCCGGACTGTCAGCCTCTTCTCTCCAGCTTTCTACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CCA 90 bp | AAAGCTGGAGAGAAGAGGCTGACAGTCCGGCCACACACTGACTCGTaGCACCGCTTGGTGACATTGGTGATCTTCCACAGGAAAGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: KAGEKRLTVRPHTDS*HRLVTLVIFHRKVP Trigger: TGGTACTTTCCTGTGGAAGATCACCAATGTCACCAAGCGGTGCCACGAGTCAGTGTGTGGCCGGACTGTCAGCCTCTTCTCTCCAGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTGGTCTCAACATTCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTGAAGCCTCCACTTCCTaGTTGAGGACAGCAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: RLVSTFRSCWHAGLLVSCEASTS*LRTATM Trigger: CATTGTTGCTGTCCTCAACAAGGAAGTGGAGGCTTC...ACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGAATGTTGAGACCAGCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGCTGTCTAGCTAAGTCCCCCAGTCTAAGCTGGTTCTGTCAGGAGACACCCCACCGCTTGGTGACATaGGTGATCTTCCACAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PGCLAKSPSLSWFCQETPHRLVT*VIFHRK Trigger: TTTCCTGTGGAAGATCACCAATGTCACCAAGCGGTG...GGGTGTCTCCTGACAGAACCAGCTTAGACTGGGGGACTTAGCTAGACAGCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CCA 90 bp | CTCAGGTCAGGCCGGAAGGCATCAATAGCATGCTCTCGGTTGTTCTaGTCAAGTAGCATAAAGGTGACCTTGTTCCTGAAAGGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRSGRKASIACSRLF*SSSIKVTLFLKGQG Trigger: GCCCTGGCCTTTCAGGAACAAGGTCACCTTTATGCTACTTGACCAGAACAACCGAGAGCATGCTATTGATGCCTTCCGGCCTGACCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | CACTCTGTGAGCAGTCGTGAAGGTGCTGTGTGTTGGACACCAGCTTCAGACTTGAGACTGTGCTCAAGCTaGCCCAGGACCTGGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSVSSREGAVCWTPASDLRLCSS*PRTWSF Trigger: AAAAGACCAGGTCCTGGGCAAGCTTGAGCACAGTCT...CAAGTCTGAAGCTGGTGTCCAACACACAGCACCTTCACGACTGCTCACAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | CCAGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGACTCGTGGCACCGCTaGGTGACATTGGTGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PDAARKHFPGQFLGLPVCDSWHR*VTLVIF Trigger: GAAGATCACCAATGTCACCAAGCGGTGCCACGAGTC...GCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTGTGTGTTGGACACCAGCTTCAGACTTGCATGGTGAGCTCTTTCTTGGGTGACTCGTGGCACCGCTaGGTGACATTGGTGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLCVGHQLQTCMVSSFLGDSWHR*VTLVIF Trigger: GAAGATCACCAATGTCACCAAGCGGTGCCACGAGTC...ACCCAAGAAAGAGCTCACCATGCAAGTCTGAAGCTGGTGTCCAACACACAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTGGTGTCGTGTAGTCTGTGTGAAAAGAGCACTTCTGTCTTCTCCTCCACTTTGGGTGACTGCAGCTaGCTGAGGGGGAAGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLVSCSLCEKSTSVFSSTLGDCS*LRGKKS Trigger: GCTCTTCTTCCCCCTCAGCAAGCTGCAGTCACCCAA...AGTGGAGGAGAAGACAGAAGTGCTCTTTTCACACAGACTACACGACACCAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS GCA 90 bp | CTTGGTGACATTGGTGATCTTCCACAGGAAAGTACCATCAAAGGATaGCTCCTCCATGAGTCGCAGACTGTGCTCAAGCTTGCCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LGDIGDLPQESTIKG*LLHESQTVLKLAQD Trigger: GTCCTGGGCAAGCTTGAGCACAGTCTGCGACTCATGGAGGAGGCATCCTTTGATGGTACTTTCCTGTGGAAGATCACCAATGTCACCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS GCA 90 bp | TGGAAGGAGGCTGAGCTCAGGTCAGGCCGGAAGGCATCAATAGCATaGTCTCGGTTGTTCTGGTCAAGTAGCATAAAGGTGACCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: WKEAELRSGRKASIA*SRLFWSSSIKVTLF Trigger: GAACAAGGTCACCTTTATGCTACTTGACCAGAACAACCGAGAGCATGCTATTGATGCCTTCCGGCCTGACCTGAGCTCAGCCTCCTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CCA 90 bp | CTCAGCTACATCAGAGTGAACCTTCTCCTGAGTCAGAGGGCTTCCTaGGCTCACAGGATGGAGGTTGTCTGCTCTGCATTTAGGACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSYIRVNLLLSQRAS*AHRMEVVCSAFRTD Trigger: ATCTGTCCTAAATGCAGAGCAGACAACCTCCATCCTGTGAGCCCAGGAAGCCCTCTGACTCAGGAGAAGGTTCACTCTGATGTAGCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | TGTACGCACACGTTTCTCCAGCCTCACATCAGCCATAACCAGCATGCTGTGGCGGGACAGCAACAATGTTaGCAAACACACGCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CTHTFLQPHISHNQHAVAGQQQC*QTHAAS Trigger: AGAAGCTGCGTGTGTTTGCAAACATTGTTGCTGTCC...CGCCACAGCATGCTGGTTATGGCTGATGTGAGGCTGGAGAAACGTGTGCGTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | CACTTAGGCCCCATAGCCTTGGCTCAATGTCCAAGCCTCAGGCCTGGCTCTTTTGCCTCCACTTCCTTGTaGAGGACAGCAACAATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HLGPIALAQCPSLRPGSFASTSL*RTATMF Trigger: AAACATTGTTGCTGTCCTCAACAAGGAAGTGGAGGC...AAAAGAGCCAGGCCTGAGGCTTGGACATTGAGCCAAGGCTATGGGGCCTAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAAGCTGCTGGCATGCTGGCCTCCTGGTGTCGTGTAGTCTGTGTGAAAAGACACCGCTTGGTGACATaGGTGATCTTCCACAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SEAAGMLASWCRVVCVKRHRLVT*VIFHRK Trigger: TTTCCTGTGGAAGATCACCAATGTCACCAAGCGGTG...TCTTTTCACACAGACTACACGACACCAGGAGGCCAGCATGCCAGCAGCTTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTGGTGTCGTGTAGTCTGTGTGAAAAGAGCACTTCTGTCTTCTCCTCCACTGACTCGTGGCACCGCTaGGTGACATTGGTGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLVSCSLCEKSTSVFSSTDSWHR*VTLVIF Trigger: GAAGATCACCAATGTCACCAAGCGGTGCCACGAGTC...AGTGGAGGAGAAGACAGAAGTGCTCTTTTCACACAGACTACACGACACCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTGTGTGTTGGACACCAGCTTCAGACTTGCATGGTGAGCTCTTTCTTGGGTAGCATAAAGGTGACCTaGTTCCTGAAAGGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLCVGHQLQTCMVSSFLGSIKVT*FLKGQG Trigger: GCCCTGGCCTTTCAGGAACAAGGTCACCTTTATGCT...ACCCAAGAAAGAGCTCACCATGCAAGTCTGAAGCTGGTGTCCAACACACAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | TGGTGTCGTGTAGTCTGTGTGAAAAGAGCACTTCTGTCTTCTCCTCCACTCTGTTTGGGTGACTGCAGCTaGCTGAGGGGGAAGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WCRVVCVKRALLSSPPLCLGDCS*LRGKKS Trigger: GCTCTTCTTCCCCCTCAGCAAGCTGCAGTCACCCAA...ACAGAGTGGAGGAGAAGACAGAAGTGCTCTTTTCACACAGACTACACGACACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTGGTGTCGTGTAGTCTGTGTGAAAAGAGCACTTCTGTCTTCTCCTCCACTAGCATAAAGGTGACCTaGTTCCTGAAAGGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLVSCSLCEKSTSVFSSTSIKVT*FLKGQG Trigger: GCCCTGGCCTTTCAGGAACAAGGTCACCTTTATGCT...AGTGGAGGAGAAGACAGAAGTGCTCTTTTCACACAGACTACACGACACCAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTGCCCTGTGGTTCTAGTTTTGAGTCTGAACAGAGAGATGGGGGCATTTTTATGCTCCTGCATGGATaGTGGGCTCCCCTTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLPCGSSFESEQRDGGIFMLLHG*WAPLEG Trigger: TCCTTCAAGGGGAGCCCACAATCCATGCAGGAGCAT...AAAAATGCCCCCATCTCTCTGTTCAGACTCAAAACTAGAACCACAGGGCAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | TCAAAGATCTCCAGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTAGACTGTGCTCAAGCTaGCCCAGGACCTGGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SKISRCSQKAFPRAVSGFRLCSS*PRTWSF Trigger: AAAAGACCAGGTCCTGGGCAAGCTTGAGCACAGTCT...AAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCTGGAGATCTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS-3UTR CAA 90 bp | AGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGTGCCTCCACTTCCTTGTaGAGGACAGCAACAATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RCSQKAFPRAVSGFTCLRASTSL*RTATMF Trigger: AAACATTGTTGCTGTCCTCAACAAGGAAGTGGAGGC...ACGCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS-3UTR CAA 90 bp | CTTCTGCCCTGTGGTTCTAGTTTTGAGTCTGAACAGAGAGATGGGGGCATTTTTGAAGCCTCCACTTCCTaGTTGAGGACAGCAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: LLPCGSSFESEQRDGGIFEASTS*LRTATM Trigger: CATTGTTGCTGTCCTCAACAAGGAAGTGGAGGCTTC...AAAAATGCCCCCATCTCTCTGTTCAGACTCAAAACTAGAACCACAGGGCAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS-3UTR CAA 90 bp | CTTCTGCCCTGTGGTTCTAGTTTTGAGTCTGAACAGAGAGATGGGGGCATTTTTCACCGCTTGGTGACATaGGTGATCTTCCACAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLPCGSSFESEQRDGGIFHRLVT*VIFHRK Trigger: TTTCCTGTGGAAGATCACCAATGTCACCAAGCGGTG...AAAAATGCCCCCATCTCTCTGTTCAGACTCAAAACTAGAACCACAGGGCAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS-3UTR CAA 90 bp | CAGGAGAATCAGGGATTCAGTGTCATTCTTGACTATATACTGAGTTTGAAACCAGACAGGTGGGTCTTCTaGCCTGAGCCATCCCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QENQGFSVILDYILSLKPDRWVF*PEPSPF Trigger: GAACGGGGATGGCTCAGGCAAGAAGACCCACCTGTC...TGGTTTCAAACTCAGTATATAGTCAAGAATGACACTGAATCCCTGATTCTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | AACAGAGAGATGGGGGCATTTTTCCAGTTATGCCCTGACCTCGAGAGAATGTCCGTGTCCACAATGCATTaGAGGAACATTGTGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: NREMGAFFQLCPDLERMSVSTMH*RNIVSS Trigger: AGATGACACAATGTTCCTCAAATGCATTGTGGACAC...GGACATTCTCTCGAGGTCAGGGCATAACTGGAAAAATGCCCCCATCTCTCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS-3UTR CAA 90 bp | AGATGCAGCCAGAAAGCATTTCCCAGGGCAGTTTCTGGGTTTACCTGTTTGCGTGTGTCCACAATGCATTaGAGGAACATTGTGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RCSQKAFPRAVSGFTCLRVSTMH*RNIVSS Trigger: AGATGACACAATGTTCCTCAAATGCATTGTGGACAC...ACGCAAACAGGTAAACCCAGAAACTGCCCTGGGAAATGCTTTCTGGCTGCATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS-3UTR CAA 90 bp | CAGGAGAATCAGGGATTCAGTGTCATTCTTGACTATATACTGAGTTTGAAACCAATGCTCCTGCATGGATaGTGGGCTCCCCTTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QENQGFSVILDYILSLKPMLLHG*WAPLEG Trigger: TCCTTCAAGGGGAGCCCACAATCCATGCAGGAGCAT...TGGTTTCAAACTCAGTATATAGTCAAGAATGACACTGAATCCCTGATTCTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172159.8 |
||
| CDS CCA 72 bp | AAGCTCAGGATGTGCTCTCGGTCCAACTGGCTCTGGTaGATGGAGGCGGCCAGTGCCAGGTGGGAAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KLRMCSRSNWLW*MEAASARWEAS Trigger: GGAGGCTTCCCACCTGGCACTGGCCGCCTCCATCCACCAGAGCCAGTTGGACCGAGAGCACATCCTGAGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS CCA 72 bp | TCAGGATGTGCTCTCGGTCCAACTGGCTCTGGTGGATaGAGGCGGCCAGTGCCAGGTGGGAAGCCTCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: SGCALGPTGSGG*RRPVPGGKPPL Trigger: AAGTGGAGGCTTCCCACCTGGCACTGGCCGCCTCCATCCACCAGAGCCAGTTGGACCGAGAGCACATCCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS CCA 72 bp | GAAGCTGCAGCTCTGACAGGTTCCGCTCCAGTGCCATaGGTGCAGACCCTAGGTTGGAGCCTGGTGAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: EAAALTGSAPVP*VQTLGWSLVRI Trigger: AATCCTCACCAGGCTCCAACCTAGGGTCTGCACCCATGGCACTGGAGCGGAACCTGTCAGAGCTGCAGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS CAA 90 bp | GTACAGGTGGGAGGACTGGGAGGTAGCCTCATGCTCCTGCATGGATaGTGGGCTCCCCTTGAAGGAACAGCCAACACCTGCAAAGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VQVGGLGGSLMLLHG*WAPLEGTANTCKGA Trigger: TGCCCCTTTGCAGGTGTTGGCTGTTCCTTCAAGGGGAGCCCACAATCCATGCAGGAGCATGAGGCTACCTCCCAGTCCTCCCACCTGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CAA 90 bp | AGCTCTGACAGGTTCCGCTCCAGTGCCATGGGTGCAGACCCTAGGTaGGAGCCTGGTGAGGATTTCCACTCCTTTAAGACCGCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSDRFRSSAMGADPR*EPGEDFHSFKTASS Trigger: GCTGCTGGCGGTCTTAAAGGAGTGGAAATCCTCACCAGGCTCCAACCTAGGGTCTGCACCCATGGCACTGGAGCGGAACCTGTCAGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS GCA 72 bp | TACAGGTGGGAGGACTGGGAGGTAGCCTCATGCTCCTaGATGGATTGTGGGCTCCCCTTGAAGGAACAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: YRWEDWEVASCS*MDCGLPLKEQP Trigger: TGGCTGTTCCTTCAAGGGGAGCCCACAATCCATGCAGGAGCATGAGGCTACCTCCCAGTCCTCCCACCTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CCA 72 bp | TTTAAGACCGCCAGCAGCAGGTACAGGTGGGAGGACTaGGAGGTAGCCTCATGCTCCTGCATGGATTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FKTASSRYRWED*EVASCSCMDCG Trigger: CCCACAATCCATGCAGGAGCATGAGGCTACCTCCCAGTCCTCCCACCTGTACCTGCTGCTGGCGGTCTTAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CCA 72 bp | TTCCACTCCTTTAAGACCGCCAGCAGCAGGTACAGGTaGGAGGACTGGGAGGTAGCCTCATGCTCCTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: FHSFKTASSRYR*EDWEVASCSCM Trigger: CATGCAGGAGCATGAGGCTACCTCCCAGTCCTCCCACCTGTACCTGCTGCTGGCGGTCTTAAAGGAGTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CCA 72 bp | GAGAAGAGGCTGACAGTCCGGCCACACACTGACTCGTaGCACCGCTTGGTGACATTGGTGATCTTCCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: EKRLTVRPHTDS*HRLVTLVIFHR Trigger: CCTGTGGAAGATCACCAATGTCACCAAGCGGTGCCACGAGTCAGTGTGTGGCCGGACTGTCAGCCTCTTCTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS CAA 90 bp | GACTGGGAGGTAGCCTCATGCTCCTGCATGGATTGTGGGCTCCCCTaGAAGGAACAGCCAACACCTGCAAAGGGGCACATGATTTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: DWEVASCSCMDCGLP*KEQPTPAKGHMISA Trigger: GGCTGAAATCATGTGCCCCTTTGCAGGTGTTGGCTGTTCCTTCAAGGGGAGCCCACAATCCATGCAGGAGCATGAGGCTACCTCCCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS CAA 90 bp | TGGATGGAGGCGGCCAGTGCCAGGTGGGAAGCCTCCACTTCCTTGTaGAGGACAGCAACAATGTTTGCAAACACACGCAGCTTCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WMEAASARWEASTSL*RTATMFANTRSFSS Trigger: GGAGGAGAAGCTGCGTGTGTTTGCAAACATTGTTGCTGTCCTCAACAAGGAAGTGGAGGCTTCCCACCTGGCACTGGCCGCCTCCATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CAA 90 bp | TGGTGGATGGAGGCGGCCAGTGCCAGGTGGGAAGCCTCCACTTCCTaGTTGAGGACAGCAACAATGTTTGCAAACACACGCAGCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WWMEAASARWEASTS*LRTATMFANTRSFS Trigger: GGAGAAGCTGCGTGTGTTTGCAAACATTGTTGCTGTCCTCAACAAGGAAGTGGAGGCTTCCCACCTGGCACTGGCCGCCTCCATCCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS TCA 72 bp | AGCTGGAGAGAAGAGGCTGACAGTCCGGCCACACACTaGCTCGTGGCACCGCTTGGTGACATTGGTGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: SWREEADSPATH*LVAPLGDIGDL Trigger: AAGATCACCAATGTCACCAAGCGGTGCCACGAGTCAGTGTGTGGCCGGACTGTCAGCCTCTTCTCTCCAGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS TCA 72 bp | CATACTTGGCAGTGTAGAAAGCTGGAGAGAAGAGGCTaGCAGTCCGGCCACACACTGACTCGTGGCACCGCT | + |
|
Preference number: 6 (lower is better) Translates to: HTWQCRKLERRG*QSGHTLTRGTA Trigger: AGCGGTGCCACGAGTCAGTGTGTGGCCGGACTGTCAGCCTCTTCTCTCCAGCTTTCTACACTGCCAAGTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS CCA 72 bp | GGACTGGGAGGTAGCCTCATGCTCCTGCATGGATTGTaGGCTCCCCTTGAAGGAACAGCCAACACCTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GLGGSLMLLHGL*APLEGTANTCK Trigger: TTTGCAGGTGTTGGCTGTTCCTTCAAGGGGAGCCCACAATCCATGCAGGAGCATGAGGCTACCTCCCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CAA 72 bp | GTAGCCTCATGCTCCTGCATGGATTGTGGGCTCCCCTaGAAGGAACAGCCAACACCTGCAAAGGGGCACATG | + |
|
Preference number: 6 (lower is better) Translates to: VASCSCMDCGLP*KEQPTPAKGHM Trigger: CATGTGCCCCTTTGCAGGTGTTGGCTGTTCCTTCAAGGGGAGCCCACAATCCATGCAGGAGCATGAGGCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS CAA 72 bp | GCGGCCAGTGCCAGGTGGGAAGCCTCCACTTCCTTGTaGAGGACAGCAACAATGTTTGCAAACACACGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AASARWEASTSL*RTATMFANTRS Trigger: GCTGCGTGTGTTTGCAAACATTGTTGCTGTCCTCAACAAGGAAGTGGAGGCTTCCCACCTGGCACTGGCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS CAA 90 bp | CTGACAGTCCGGCCACACACTGACTCGTGGCACCGCTTGGTGACATaGGTGATCTTCCACAGGAAAGTACCATCAAAGGATGCCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LTVRPHTDSWHRLVT*VIFHRKVPSKDASS Trigger: GGAGGAGGCATCCTTTGATGGTACTTTCCTGTGGAAGATCACCAATGTCACCAAGCGGTGCCACGAGTCAGTGTGTGGCCGGACTGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS TCA 72 bp | CGGCCAGTGCCAGGTGGGAAGCCTCCACTTCCTTGTTaGGGACAGCAACAATGTTTGCAAACACACGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RPVPGGKPPLPC*GQQQCLQTHAA Trigger: AGCTGCGTGTGTTTGCAAACATTGTTGCTGTCCTCAACAAGGAAGTGGAGGCTTCCCACCTGGCACTGGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS CAA 72 bp | CTGACAGTCCGGCCACACACTGACTCGTGGCACCGCTaGGTGACATTGGTGATCTTCCACAGGAAAGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: LTVRPHTDSWHR*VTLVIFHRKVP Trigger: TGGTACTTTCCTGTGGAAGATCACCAATGTCACCAAGCGGTGCCACGAGTCAGTGTGTGGCCGGACTGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS TCA 72 bp | TCCACAGGAAAGTACCATCAAAGGATGCCTCCTCCATaGGTCGCAGACTGTGCTCAAGCTTGCCCAGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: STGKYHQRMPPP*VADCAQACPGP Trigger: AGGTCCTGGGCAAGCTTGAGCACAGTCTGCGACTCATGGAGGAGGCATCCTTTGATGGTACTTTCCTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS GCA 72 bp | CAGAGGGCTTCCTGGGCTCACAGGATGGAGGTTGTCTaGTCTGCATTTAGGACAGATCCGATCCTCATCATC | + |
|
Preference number: 6 (lower is better) Translates to: QRASWAHRMEVV*SAFRTDPILII Trigger: GATGATGAGGATCGGATCTGTCCTAAATGCAGAGCAGACAACCTCCATCCTGTGAGCCCAGGAAGCCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 ENSMUST00000201690.2 |
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| CDS CAA 90 bp | GAGAAGAGGCTGACAGTCCGGCCACACACTGACTCGTGGCACCGCTaGGTGACATTGGTGATCTTCCACAGGAAAGTACCATCAAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: EKRLTVRPHTDSWHR*VTLVIFHRKVPSKD Trigger: ATCCTTTGATGGTACTTTCCTGTGGAAGATCACCAATGTCACCAAGCGGTGCCACGAGTCAGTGTGTGGCCGGACTGTCAGCCTCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS GCA 72 bp | AGCCTCCACTTCCTTGTTGAGGACAGCAACAATGTTTaGAAACACACGCAGCTTCTCCTCCAGCTGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLHFLVEDSNNV*KHTQLLLQLSQ Trigger: CTGGCTCAGCTGGAGGAGAAGCTGCGTGTGTTTGCAAACATTGTTGCTGTCCTCAACAAGGAAGTGGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS GCA 72 bp | GCTGAGCTCAGGTCAGGCCGGAAGGCATCAATAGCATaGTCTCGGTTGTTCTGGTCAAGTAGCATAAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AELRSGRKASIA*SRLFWSSSIKV Trigger: CACCTTTATGCTACTTGACCAGAACAACCGAGAGCATGCTATTGATGCCTTCCGGCCTGACCTGAGCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CCA 72 bp | ATCAGAGTGAACCTTCTCCTGAGTCAGAGGGCTTCCTaGGCTCACAGGATGGAGGTTGTCTGCTCTGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: IRVNLLLSQRAS*AHRMEVVCSAF Trigger: AAATGCAGAGCAGACAACCTCCATCCTGTGAGCCCAGGAAGCCCTCTGACTCAGGAGAAGGTTCACTCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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| CDS CAA 72 bp | CGGCCACACACTGACTCGTGGCACCGCTTGGTGACATaGGTGATCTTCCACAGGAAAGTACCATCAAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RPHTDSWHRLVT*VIFHRKVPSKD Trigger: ATCCTTTGATGGTACTTTCCTGTGGAAGATCACCAATGTCACCAAGCGGTGCCACGAGTCAGTGTGTGGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CAA 90 bp | GCTGAGCTCAGGTCAGGCCGGAAGGCATCAATAGCATGCTCTCGGTaGTTCTGGTCAAGTAGCATAAAGGTGACCTTGTTCCTGAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: AELRSGRKASIACSR*FWSSSIKVTLFLKG Trigger: GCCTTTCAGGAACAAGGTCACCTTTATGCTACTTGACCAGAACAACCGAGAGCATGCTATTGATGCCTTCCGGCCTGACCTGAGCTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CAA 90 bp | ATAGCATGCTCTCGGTTGTTCTGGTCAAGTAGCATAAAGGTGACCTaGTTCCTGAAAGGCCAGGGCAGGAGAGCATCGTATTCTCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: IACSRLFWSSSIKVT*FLKGQGRRASYSPL Trigger: GAGAGGAGAATACGATGCTCTCCTGCCCTGGCCTTTCAGGAACAAGGTCACCTTTATGCTACTTGACCAGAACAACCGAGAGCATGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CAA 72 bp | TCTCGGTTGTTCTGGTCAAGTAGCATAAAGGTGACCTaGTTCCTGAAAGGCCAGGGCAGGAGAGCATCGTAT | + |
|
Preference number: 6 (lower is better) Translates to: SRLFWSSSIKVT*FLKGQGRRASY Trigger: ATACGATGCTCTCCTGCCCTGGCCTTTCAGGAACAAGGTCACCTTTATGCTACTTGACCAGAACAACCGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CAA 72 bp | AGGTCAGGCCGGAAGGCATCAATAGCATGCTCTCGGTaGTTCTGGTCAAGTAGCATAAAGGTGACCTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RSGRKASIACSR*FWSSSIKVTLF Trigger: GAACAAGGTCACCTTTATGCTACTTGACCAGAACAACCGAGAGCATGCTATTGATGCCTTCCGGCCTGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS GCA 72 bp | ATTGGTGATCTTCCACAGGAAAGTACCATCAAAGGATaGCTCCTCCATGAGTCGCAGACTGTGCTCAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: IGDLPQESTIKG*LLHESQTVLKL Trigger: AAGCTTGAGCACAGTCTGCGACTCATGGAGGAGGCATCCTTTGATGGTACTTTCCTGTGGAAGATCACCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
||
| CDS CCA 72 bp | GGCCGGAAGGCATCAATAGCATGCTCTCGGTTGTTCTaGTCAAGTAGCATAAAGGTGACCTTGTTCCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GRKASIACSRLF*SSSIKVTLFLK Trigger: TTTCAGGAACAAGGTCACCTTTATGCTACTTGACCAGAACAACCGAGAGCATGCTATTGATGCCTTCCGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028234.12 ENSMUST00000113064.8 ENSMUST00000172159.8 |
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