RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRABD2B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070867

Ensembl transcript IDs: ENSMUST00000094894.4

Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCCAACCAGGCGCCATCAAGCCTGCCAGGGAAACCCATGTGCAGTaGGGTGAGAGAACGGGACCGGAGTCAACATGCCTGTCTCAGCTG +
Preference number: 1 (lower is better)
Translates to: SQPGAIKPARETHVQ*GERTGPESTCLSQL
Trigger: CAGCTGAGACAGGCATGTTGACTCCGGTCCCGTTCTCTCACCTCACTGCACATGGGTTTCCCTGGCAGGCTTGATGGCGCCTGGTTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 90 bp TCAGTCAGACCCCGGAGGACAGAAGGCTTCTGTGCCTCAACTCCCTaGCTGTCCATGCTGGCTGCTAGAGGCTCCTGGCTACAGAAGCCA +
Preference number: 1 (lower is better)
Translates to: SVRPRRTEGFCASTP*LSMLAARGSWLQKP
Trigger: TGGCTTCTGTAGCCAGGAGCCTCTAGCAGCCAGCATGGACAGGCAGGGAGTTGAGGCACAGAAGCCTTCTGTCCTCCGGGGTCTGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 90 bp GCTGTAGCCAACCAGGCGCCATCAAGCCTGCCAGGGAAACCCATGTaGAGTGAGGTGAGAGAACGGGACCGGAGTCAACATGCCTGTCTC +
Preference number: 1 (lower is better)
Translates to: AVANQAPSSLPGKPM*SEVRERDRSQHACL
Trigger: GAGACAGGCATGTTGACTCCGGTCCCGTTCTCTCACCTCACTGCACATGGGTTTCCCTGGCAGGCTTGATGGCGCCTGGTTGGCTACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 90 bp ATGGGCAGGGTTTCAATCCAGGCATCTCCTCCCCAAGAGGTCCCCTaGCCAAGGGCAGCAAGAGTTTCTGCCAGTTCTTGGCAAGCCTGG +
Preference number: 1 (lower is better)
Translates to: MGRVSIQASPPQEVP*PRAARVSASSWQAW
Trigger: CCAGGCTTGCCAAGAACTGGCAGAAACTCTTGCTGCCCTTGGGCAGGGGACCTCTTGGGGAGGAGATGCCTGGATTGAAACCCTGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 90 bp GCTGCCTGCCAGGATGCCTGTGGGACCCCTGACTATGCAATGAGTTaGCCAGAGTCCTGCCATCTCAGAAGGGAGATGTCTGCCAACCTA +
Preference number: 1 (lower is better)
Translates to: AACQDACGTPDYAMS*PESCHLRREMSANL
Trigger: TAGGTTGGCAGACATCTCCCTTCTGAGATGGCAGGACTCTGGGCAACTCATTGCATAGTCAGGGGTCCCACAGGCATCCTGGCAGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CCA 90 bp CTAGAGGCTCCTGGCTACAGAAGCCAGCAGGGGGAGCTGGAGAAATaGCCTCCTTGTCTGCCATGGGAAGATTGGGAGGGTTCCAGTTTG +
Preference number: 1 (lower is better)
Translates to: LEAPGYRSQQGELEK*PPCLPWEDWEGSSL
Trigger: CAAACTGGAACCCTCCCAATCTTCCCATGGCAGACAAGGAGGCCATTTCTCCAGCTCCCCCTGCTGGCTTCTGTAGCCAGGAGCCTCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CCA 90 bp CCCTGCCCAAGGGCAGCAAGAGTTTCTGCCAGTTCTTGGCAAGCCTaGCTGGGCTGTGTAAGAATGGGGGAGGGGTGTAGAGAGGCTTTA +
Preference number: 1 (lower is better)
Translates to: PCPRAARVSASSWQA*LGCVRMGEGCREAL
Trigger: TAAAGCCTCTCTACACCCCTCCCCCATTCTTACACAGCCCAGCCAGGCTTGCCAAGAACTGGCAGAAACTCTTGCTGCCCTTGGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 90 bp ATTCTGCTGCCTGCCAGGATGCCTGTGGGACCCCTGACTATGCAATaGGTTGCCCAGAGTCCTGCCATCTCAGAAGGGAGATGTCTGCCA +
Preference number: 1 (lower is better)
Translates to: ILLPARMPVGPLTMQ*VAQSPAISEGRCLP
Trigger: TGGCAGACATCTCCCTTCTGAGATGGCAGGACTCTGGGCAACTCATTGCATAGTCAGGGGTCCCACAGGCATCCTGGCAGGCAGCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 90 bp GATGCCTGTGGGACCCCTGACTATGCAATGAGTTGCCCAGAGTCCTaGCATCTCAGAAGGGAGATGTCTGCCAACCTAAGCATGGCGGTG +
Preference number: 1 (lower is better)
Translates to: DACGTPDYAMSCPES*HLRREMSANLSMAV
Trigger: CACCGCCATGCTTAGGTTGGCAGACATCTCCCTTCTGAGATGGCAGGACTCTGGGCAACTCATTGCATAGTCAGGGGTCCCACAGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 90 bp TTTCTGCCTGCCCTCAGAGGTGCCTACAGTGGGAGAAGTCAAGCCTaGGTAGGAGGCTTGGGGCCAATTCAAAGCCACTGTCTACACAGG +
Preference number: 1 (lower is better)
Translates to: FLPALRGAYSGRSQA*VGGLGPIQSHCLHR
Trigger: CCTGTGTAGACAGTGGCTTTGAATTGGCCCCAAGCCTCCTACTCAGGCTTGACTTCTCCCACTGTAGGCACCTCTGAGGGCAGGCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 90 bp AGCTGGAAAGAATTCTGCTGCCTGCCAGGATGCCTGTGGGACCCCTaGCTATGCAATGAGTTGCCCAGAGTCCTGCCATCTCAGAAGGGA +
Preference number: 1 (lower is better)
Translates to: SWKEFCCLPGCLWDP*LCNELPRVLPSQKG
Trigger: TCCCTTCTGAGATGGCAGGACTCTGGGCAACTCATTGCATAGTCAGGGGTCCCACAGGCATCCTGGCAGGCAGCAGAATTCTTTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 90 bp TGCCCAGCTCACTTCCCAGCCCTAACCAGGTTTACCAGCCCCTCTTaGATGGAAGCTGGATCAGTGACACTGGAACATCAATCACCCACT +
Preference number: 1 (lower is better)
Translates to: CPAHFPALTRFTSPS*MEAGSVTLEHQSPT
Trigger: AGTGGGTGATTGATGTTCCAGTGTCACTGATCCAGCTTCCATTCAAGAGGGGCTGGTAAACCTGGTTAGGGCTGGGAAGTGAGCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CCA 90 bp ATGCCTGTCTCAGCTGTGCCACTTTGGAGAGGCCTTTCCTCTTTCTaGACCTTAGCGTCATTCTTACTCTTGTTGCCAGGTGAGGGCTCT +
Preference number: 1 (lower is better)
Translates to: MPVSAVPLWRGLSSF*TLASFLLLLPGEGS
Trigger: AGAGCCCTCACCTGGCAACAAGAGTAAGAATGACGCTAAGGTCCAGAAAGAGGAAAGGCCTCTCCAAAGTGGCACAGCTGAGACAGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CCA 90 bp CTTCCCAGCCCTAACCAGGTTTACCAGCCCCTCTTGAATGGAAGCTaGATCAGTGACACTGGAACATCAATCACCCACTTGCTTTGTGAC +
Preference number: 1 (lower is better)
Translates to: LPSPNQVYQPLLNGS*ISDTGTSITHLLCD
Trigger: GTCACAAAGCAAGTGGGTGATTGATGTTCCAGTGTCACTGATCCAGCTTCCATTCAAGAGGGGCTGGTAAACCTGGTTAGGGCTGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 90 bp TACAATTCAGCCCATGTGTGTAACCCTGGCACTGTGCTTGCACAGTaGTTACATGCTGTATTAATTCACCATCTTGGCCCCACGCCTGGC +
Preference number: 1 (lower is better)
Translates to: YNSAHVCNPGTVLAQ*LHAVLIHHLGPTPG
Trigger: GCCAGGCGTGGGGCCAAGATGGTGAATTAATACAGCATGTAATCACTGTGCAAGCACAGTGCCAGGGTTACACACATGGGCTGAATTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CCA 90 bp TTTCTTTCTTTCTTTCTTTCTTCATTTCTCCTTAAATTGCCCTTCTaGGGCCTGGACAGGGTTAGGGAGGATGGCTGGCCACTATGCCCC +
Preference number: 1 (lower is better)
Translates to: FLSFFLSSFLLKLPF*GLDRVREDGWPLCP
Trigger: GGGGCATAGTGGCCAGCCATCCTCCCTAACCCTGTCCAGGCCCCAGAAGGGCAATTTAAGGAGAAATGAAGAAAGAAAGAAAGAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 90 bp CAAGCTGTTTTAGAACTCACTGTGCATCCCAGTCTGGACCTCTTATaGTGCTTGTTGATGCTCTTGCCTCAGACTCCCAAGTACAGTCCT +
Preference number: 1 (lower is better)
Translates to: QAVLELTVHPSLDLL*CLLMLLPQTPKYSP
Trigger: AGGACTGTACTTGGGAGTCTGAGGCAAGAGCATCAACAAGCATCATAAGAGGTCCAGACTGGGATGCACAGTGAGTTCTAAAACAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 90 bp TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCATTTCTCCTTAAATTaGCCTTCTGGGGCCTGGACAGGGTTAGGGAGGATGGCTGGCCAC +
Preference number: 1 (lower is better)
Translates to: FLSFFLSFFLHFSLN*PSGAWTGLGRMAGH
Trigger: GTGGCCAGCCATCCTCCCTAACCCTGTCCAGGCCCCAGAAGGGCAATTTAAGGAGAAATGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 90 bp TGCATACTATGCGTCTACCTCCACCTGGAGAACTCTACTCTCAGATaGTATCCTTTAGCAGCTAGGGATGTGGAAGTTGTCTCAAATAGA +
Preference number: 1 (lower is better)
Translates to: CILCVYLHLENSTLR*YPLAARDVEVVSNR
Trigger: TCTATTTGAGACAACTTCCACATCCCTAGCTGCTAAAGGATAGCATCTGAGAGTAGAGTTCTCCAGGTGGAGGTAGACGCATAGTATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CCA 90 bp ATCTCCATACATCTCATGCCATACTCTGCCCCAAACAGGGGAATCTaGCCTGTGTGTTTCCAATTCCTTTACACTTATCTCATCCCAATA +
Preference number: 1 (lower is better)
Translates to: ISIHLMPYSAPNRGI*PVCFQFLYTYLIPI
Trigger: TATTGGGATGAGATAAGTGTAAAGGAATTGGAAACACACAGGCCAGATTCCCCTGTTTGGGGCAGAGTATGGCATGAGATGTATGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp TGCTGTATTAATTCACCATCTTGGCCCCACGCCTGGCACAGGTCTGGGCACACGCTGGGGCTGCCTTTCTaGCTGCCCTCAGAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: CCINSPSWPHAWHRSGHTLGLPF*LPSEVP
Trigger: AGGCACCTCTGAGGGCAGGCAGAAAGGCAGCCCCAG...CGTGTGCCCAGACCTGTGCCAGGCGTGGGGCCAAGATGGTGAATTAATACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 90 bp TGTCCATGGGACTGGCGGGACCCTGTGAAGCAGAGTTCCAGAATCTaGCCAGGTCTCAGGCTTAAACCTGTCCACTGGGGCAGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: CPWDWRDPVKQSSRI*PGLRLKPVHWGRAG
Trigger: TCCAGCTCTGCCCCAGTGGACAGGTTTAAGCCTGAGACCTGGCAAGATTCTGGAACTCTGCTTCACAGGGTCCCGCCAGTCCCATGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp GGGCTGCCTTTCTGCCTGCCCTCAGAGGTGCCTACAGTGGGAGAAGTCAAGCCTCTGTCCTGTGTGAACTaGCTTGAGGGTGTTAGCACC +
Preference number: 2 (lower is better)
Translates to: GLPFCLPSEVPTVGEVKPLSCVN*LEGVST
Trigger: GGTGCTAACACCCTCAAGGCAGTTCACACAGGACAG...AGGCTTGACTTCTCCCACTGTAGGCACCTCTGAGGGCAGGCAGAAAGGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp TTCTCAGTCAGACCCCGGAGGACAGAAGGCTTCTGTGCCTCAACTCCCTGCCTGAGGTCACAGAGGTCATaGGAACCTGGGTTCCTTCCC +
Preference number: 2 (lower is better)
Translates to: FSVRPRRTEGFCASTPCLRSQRS*EPGFLP
Trigger: GGGAAGGAACCCAGGTTCCCATGACCTCTGTGACCT...CAGGCAGGGAGTTGAGGCACAGAAGCCTTCTGTCCTCCGGGGTCTGACTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 90 bp GCAGGGGGAGCTGGAGAAATGGCCTCCTTGTCTGCCATGGGAAGATaGGGAGGGTTCCAGTTTGGGAAATCTGCCTCCCCTGGTTCTTCT +
Preference number: 2 (lower is better)
Translates to: AGGAGEMASLSAMGR*GGFQFGKSASPGSS
Trigger: AGAAGAACCAGGGGAGGCAGATTTCCCAAACTGGAACCCTCCCAATCTTCCCATGGCAGACAAGGAGGCCATTTCTCCAGCTCCCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp TGCTGTATTAATTCACCATCTTGGCCCCACGCCTGGCACAGGTCTGGGCACACGCTCCTGTGGTTTCTCTaGCTTCTCTGCAAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: CCINSPSWPHAWHRSGHTLLWFL*LLCKGG
Trigger: ACCACCCTTGCAGAGAAGCCAGAGAAACCACAGGAG...CGTGTGCCCAGACCTGTGCCAGGCGTGGGGCCAAGATGGTGAATTAATACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 90 bp CTGCCCAGCTCACTTCCCAGCCCTAACCAGGTTTACCAGCCCCTCTaGAATGGAAGCTGGATCAGTGACACTGGAACATCAATCACCCAC +
Preference number: 2 (lower is better)
Translates to: LPSSLPSPNQVYQPL*NGSWISDTGTSITH
Trigger: GTGGGTGATTGATGTTCCAGTGTCACTGATCCAGCTTCCATTCAAGAGGGGCTGGTAAACCTGGTTAGGGCTGGGAAGTGAGCTGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 90 bp GAGCTTCCAGGCTTGCCCAAGTCTGGACTGGACAAGACTAGGACATaGCCGGTGACCACACTCCATGTGAGAAGGATGTGCTTGGGTCTT +
Preference number: 2 (lower is better)
Translates to: ELPGLPKSGLDKTRT*PVTTLHVRRMCLGL
Trigger: AAGACCCAAGCACATCCTTCTCACATGGAGTGTGGTCACCGGCAATGTCCTAGTCTTGTCCAGTCCAGACTTGGGCAAGCCTGGAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp TGGCCCCAGGAAACTCTCCCTATGGTCCATGAAGAAACAGAAGCTGAAAGAGCTCCCATTCCTGTCCTCTaGCCAGCTCACTTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: WPQETLPMVHEETEAERAPIPVL*PAHFPA
Trigger: GGCTGGGAAGTGAGCTGGGCAGAGGACAGGAATGGG...AGCTCTTTCAGCTTCTGTTTCTTCATGGACCATAGGGAGAGTTTCCTGGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp CTTGATCTCCATACATCTCATGCCATACTCTGCCCCAAACAGGGGAATCTGGCCGGGAGGGTTCCAGTTTaGGAAATCTGCCTCCCCTGG +
Preference number: 2 (lower is better)
Translates to: LDLHTSHAILCPKQGNLAGRVPV*EICLPW
Trigger: CCAGGGGAGGCAGATTTCCCAAACTGGAACCCTCCC...GGCCAGATTCCCCTGTTTGGGGCAGAGTATGGCATGAGATGTATGGAGATCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 90 bp AAATGGCCTCCTTGTCTGCCATGGGAAGATTGGGAGGGTTCCAGTTaGGGAAATCTGCCTCCCCTGGTTCTTCTCCTGACCGAAAGAGCA +
Preference number: 2 (lower is better)
Translates to: KWPPCLPWEDWEGSS*GNLPPLVLLLTERA
Trigger: TGCTCTTTCGGTCAGGAGAAGAACCAGGGGAGGCAGATTTCCCAAACTGGAACCCTCCCAATCTTCCCATGGCAGACAAGGAGGCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 90 bp GTTGGGGCTGGGAAAGTAGCCCAGGATAGCTCCACTTATCCCATGTaGATGGTGAACTCTTCTGGGCCCAGAAGGGTGGGTACAATTCAG +
Preference number: 2 (lower is better)
Translates to: VGAGKVAQDSSTYPM*MVNSSGPRRVGTIQ
Trigger: CTGAATTGTACCCACCCTTCTGGGCCCAGAAGAGTTCACCATCAACATGGGATAAGTGGAGCTATCCTGGGCTACTTTCCCAGCCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR TCA 90 bp TGCTGTATTAATTCACCATCTTGGCCCCACGCCTGGCACAGGTCTGGGCACACGGACTCCAGTCCTGGTTaGGGTCAAGTTCAGTTTACA +
Preference number: 2 (lower is better)
Translates to: CCINSPSWPHAWHRSGHTDSSPG*GQVQFT
Trigger: TGTAAACTGAACTTGACCTCAACCAGGACTGGAGTC...CGTGTGCCCAGACCTGTGCCAGGCGTGGGGCCAAGATGGTGAATTAATACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp GAAGCTGGATCAGTGACACTGGAACATCAATCACCCACTTGCTTTGTGACCTTGGGCTGCCTTTCTGCCTaGCCTCAGAGGTGCCTACAG +
Preference number: 2 (lower is better)
Translates to: EAGSVTLEHQSPTCFVTLGCLSA*PQRCLQ
Trigger: CTGTAGGCACCTCTGAGGGCAGGCAGAAAGGCAGCC...CAAGGTCACAAAGCAAGTGGGTGATTGATGTTCCAGTGTCACTGATCCAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp TGGCCCCAGGAAACTCTCCCTATGGTCCATGAAGAAACAGAAGCTGAAAGAGCTGAGGTCATGGGAACCTaGGTTCCTTCCCTGGGTTGG +
Preference number: 2 (lower is better)
Translates to: WPQETLPMVHEETEAERAEVMGT*VPSLGW
Trigger: CCAACCCAGGGAAGGAACCCAGGTTCCCATGACCTC...AGCTCTTTCAGCTTCTGTTTCTTCATGGACCATAGGGAGAGTTTCCTGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp GTTGATGCTCTTGCCTCAGACTCCCAAGTACAGTCCTTACAGACATGTGCTACTGCTGCTAGAGGCTCCTaGCTACAGAAGCCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: VDALASDSQVQSLQTCATAARGS*LQKPAG
Trigger: CCCTGCTGGCTTCTGTAGCCAGGAGCCTCTAGCAGC...AGTAGCACATGTCTGTAAGGACTGTACTTGGGAGTCTGAGGCAAGAGCATCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 90 bp AGAGAACGGGACCGGAGTCAACATGCCTGTCTCAGCTGTGCCACTTaGGAGAGGCCTTTCCTCTTTCTGGACCTTAGCGTCATTCTTACT +
Preference number: 2 (lower is better)
Translates to: RERDRSQHACLSCAT*ERPFLFLDLSVILT
Trigger: AGTAAGAATGACGCTAAGGTCCAGAAAGAGGAAAGGCCTCTCCAAAGTGGCACAGCTGAGACAGGCATGTTGACTCCGGTCCCGTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp TGCTGTATTAATTCACCATCTTGGCCCCACGCCTGGCACAGGTCTGGGCACACGAGAGTTCCAGAATCTTaGCAGGTCTCAGGCTTAAAC +
Preference number: 2 (lower is better)
Translates to: CCINSPSWPHAWHRSGHTRVPES*QVSGLN
Trigger: GTTTAAGCCTGAGACCTGGCAAGATTCTGGAACTCT...CGTGTGCCCAGACCTGTGCCAGGCGTGGGGCCAAGATGGTGAATTAATACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp TGGCCCCAGGAAACTCTCCCTATGGTCCATGAAGAAACAGAAGCTGAAAGAGCTACCCTAATCCAGGGCTaGGCAGGGCATACATCTTGG +
Preference number: 2 (lower is better)
Translates to: WPQETLPMVHEETEAERATLIQG*AGHTSW
Trigger: CCAAGATGTATGCCCTGCCCAGCCCTGGATTAGGGT...AGCTCTTTCAGCTTCTGTTTCTTCATGGACCATAGGGAGAGTTTCCTGGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR TCA 90 bp GGGATGTGGAAGTTGTCTCAAATAGAAAGCCAAGGCTGTCTTTTGCCTTTCCTAGGGAGAAGTCAAGCCTaGGTAGGAGGCTTGGGGCCA +
Preference number: 2 (lower is better)
Translates to: GMWKLSQIESQGCLLPFLGRSQA*VGGLGP
Trigger: TGGCCCCAAGCCTCCTACTCAGGCTTGACTTCTCCC...TAGGAAAGGCAAAAGACAGCCTTGGCTTTCTATTTGAGACAACTTCCACATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR TCA 90 bp TGGCCCCAGGAAACTCTCCCTATGGTCCATGAAGAAACAGAAGCTGAAAGAGCTACTCTTGTTGCCAGGTaGGGGCTCTTTTCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: WPQETLPMVHEETEAERATLVAR*GLFSAL
Trigger: GAGAGCAGAAAAGAGCCCTCACCTGGCAACAAGAGT...AGCTCTTTCAGCTTCTGTTTCTTCATGGACCATAGGGAGAGTTTCCTGGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp TGCTGTATTAATTCACCATCTTGGCCCCACGCCTGGCACAGGTCTGGGCACACGAGCCCCATAGCACTATaGGAAATTAAGACCTTCTAC +
Preference number: 2 (lower is better)
Translates to: CCINSPSWPHAWHRSGHTSPIAL*EIKTFY
Trigger: GTAGAAGGTCTTAATTTCCCATAGTGCTATGGGGCT...CGTGTGCCCAGACCTGTGCCAGGCGTGGGGCCAAGATGGTGAATTAATACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp GGGATGTGGAAGTTGTCTCAAATAGAAAGCCAAGGCTGTCTTTTGCCTTTCCTATGCCCTTCTGGGGCCTaGACAGGGTTAGGGAGGATG +
Preference number: 2 (lower is better)
Translates to: GMWKLSQIESQGCLLPFLCPSGA*TGLGRM
Trigger: CATCCTCCCTAACCCTGTCCAGGCCCCAGAAGGGCA...TAGGAAAGGCAAAAGACAGCCTTGGCTTTCTATTTGAGACAACTTCCACATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 90 bp AGAGGCCTTTCCTCTTTCTGGACCTTAGCGTCATTCTTACTCTTGTaGCCAGGTGAGGGCTCTTTTCTGCTCTCAGGATCTAGGACTCCT +
Preference number: 2 (lower is better)
Translates to: RGLSSFWTLASFLLL*PGEGSFLLSGSRTP
Trigger: AGGAGTCCTAGATCCTGAGAGCAGAAAAGAGCCCTCACCTGGCAACAAGAGTAAGAATGACGCTAAGGTCCAGAAAGAGGAAAGGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 90 bp ACCTTACAAAGCCAGGGGCACTTTCATGGCATTTACACCAATCCTTaGCCAAGATTTCCAGCTGGTTGCCACATCTTCAGCCAGTGGACC +
Preference number: 2 (lower is better)
Translates to: TLQSQGHFHGIYTNP*PRFPAGCHIFSQWT
Trigger: GGTCCACTGGCTGAAGATGTGGCAACCAGCTGGAAATCTTGGCAAAGGATTGGTGTAAATGCCATGAAAGTGCCCCTGGCTTTGTAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp GGGATGTGGAAGTTGTCTCAAATAGAAAGCCAAGGCTGTCTTTTGCCTTTCCTAGGACCGGAGTCAACATaGCTGTCTCAGCTGTGCCAC +
Preference number: 2 (lower is better)
Translates to: GMWKLSQIESQGCLLPFLGPEST*LSQLCH
Trigger: GTGGCACAGCTGAGACAGGCATGTTGACTCCGGTCC...TAGGAAAGGCAAAAGACAGCCTTGGCTTTCTATTTGAGACAACTTCCACATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR TCA 90 bp AACAGACACAGGACCCACCTCATTGATTTGCTTGTATTTCCAACAGGGAGCAAAAGGAGGGATGAGACATaGCCAGCAAGGTCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: NRHRTHLIDLLVFPTGSKRRDET*PARSAE
Trigger: CTCAGCTGACCTTGCTGGTCATGTCTCATCCCTCCT...TTTGCTCCCTGTTGGAAATACAAGCAAATCAATGAGGTGGGTCCTGTGTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp CACTTTCATGGCATTTACACCAATCCTTTGCCAAGATTTCCAGCTGGTTGCCACCAGAGGTGCCTACAGTaGGAGAAGTCAAGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: HFHGIYTNPLPRFPAGCHQRCLQ*EKSSLS
Trigger: ACTCAGGCTTGACTTCTCCCACTGTAGGCACCTCTG...GTGGCAACCAGCTGGAAATCTTGGCAAAGGATTGGTGTAAATGCCATGAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp GTTGATGCTCTTGCCTCAGACTCCCAAGTACAGTCCTTACAGACATGTGCTACTTCAGCTGTGCCACTTTaGAGAGGCCTTTCCTCTTTC +
Preference number: 2 (lower is better)
Translates to: VDALASDSQVQSLQTCATSAVPL*RGLSSF
Trigger: GAAAGAGGAAAGGCCTCTCCAAAGTGGCACAGCTGA...AGTAGCACATGTCTGTAAGGACTGTACTTGGGAGTCTGAGGCAAGAGCATCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 90 bp CTAGGGATGTGGAAGTTGTCTCAAATAGAAAGCCAAGGCTGTCTTTaGCCTTTCCTAGCTCCAACCTCTTCTTCCTCTGTCCTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: LGMWKLSQIESQGCL*PFLAPTSSSSVLLP
Trigger: AGGAAGCAGGACAGAGGAAGAAGAGGTTGGAGCTAGGAAAGGCAAAAGACAGCCTTGGCTTTCTATTTGAGACAACTTCCACATCCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp TTTGGAAAACTAACAATGTGTAAAGAACCCAAACCTTACAAAGCCAGGGGCACTCACAAAAGCTGGGGCTaGCTTTCTGCCTGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: FGKLTMCKEPKPYKARGTHKSWG*LSACPQ
Trigger: CTGAGGGCAGGCAGAAAGGCAGCCCCAGCTTTTGTG...AGTGCCCCTGGCTTTGTAAGGTTTGGGTTCTTTACACATTGTTAGTTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp TTTGGAAAACTAACAATGTGTAAAGAACCCAAACCTTACAAAGCCAGGGGCACTTGTGCCTCAACTCCCTaGCTGTCCATGCTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: FGKLTMCKEPKPYKARGTCASTP*LSMLAA
Trigger: AGCAGCCAGCATGGACAGGCAGGGAGTTGAGGCACA...AGTGCCCCTGGCTTTGTAAGGTTTGGGTTCTTTACACATTGTTAGTTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp GAGAGCTTCCCCTGGGGAGTAACATGTATAAAGCACCATGTCTATTCTAGAAATTCTGTTGGACTACTCTaGCCTCCTTCCCTCCCTCCT +
Preference number: 2 (lower is better)
Translates to: ESFPWGVTCIKHHVYSRNSVGLL*PPSLPP
Trigger: AGGAGGGAGGGAAGGAGGGCAGAGTAGTCCAACAGA...ATTTCTAGAATAGACATGGTGCTTTATACATGTTACTCCCCAGGGGAAGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp GAGAGCTTCCCCTGGGGAGTAACATGTATAAAGCACCATGTCTATTCTAGAAATCTGAGCTTCCAGGCTTaGCCAAGTCTGGACTGGACA +
Preference number: 2 (lower is better)
Translates to: ESFPWGVTCIKHHVYSRNLSFQA*PSLDWT
Trigger: TGTCCAGTCCAGACTTGGGCAAGCCTGGAAGCTCAG...ATTTCTAGAATAGACATGGTGCTTTATACATGTTACTCCCCAGGGGAAGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp AACAGACACAGGACCCACCTCATTGATTTGCTTGTATTTCCAACAGGGAGCAAACTTAAATTGCCCTTCTaGGGCCTGGACAGGGTTAGG +
Preference number: 2 (lower is better)
Translates to: NRHRTHLIDLLVFPTGSKLKLPF*GLDRVR
Trigger: CCTAACCCTGTCCAGGCCCCAGAAGGGCAATTTAAG...TTTGCTCCCTGTTGGAAATACAAGCAAATCAATGAGGTGGGTCCTGTGTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp TGTGCTTGGGTCTTTCAGTATAAGGTGAACGTTGTGAGTCACCCTCAGTCCAGAGCAGGGCATACATCTTaGGTGGATCTTTTCCCTCTT +
Preference number: 2 (lower is better)
Translates to: CAWVFQYKVNVVSHPQSRAGHTS*VDLFPL
Trigger: AAGAGGGAAAAGATCCACCCAAGATGTATGCCCTGC...TCTGGACTGAGGGTGACTCACAACGTTCACCTTATACTGAAAGACCCAAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp GAGAGCTTCCCCTGGGGAGTAACATGTATAAAGCACCATGTCTATTCTAGAAATTGCCTGTCTCAGCTGTaGCACTTTGGAGAGGCCTTT +
Preference number: 2 (lower is better)
Translates to: ESFPWGVTCIKHHVYSRNCLSQL*HFGEAF
Trigger: AAAGGCCTCTCCAAAGTGGCACAGCTGAGACAGGCA...ATTTCTAGAATAGACATGGTGCTTTATACATGTTACTCCCCAGGGGAAGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp GGGATGTGGAAGTTGTCTCAAATAGAAAGCCAAGGCTGTCTTTTGCCTTTCCTAACACGGTCAGGTGCTTaGACTCTTTCCCCAAATGCT +
Preference number: 2 (lower is better)
Translates to: GMWKLSQIESQGCLLPFLTRSGA*TLSPNA
Trigger: AGCATTTGGGGAAAGAGTCCAAGCACCTGACCGTGT...TAGGAAAGGCAAAAGACAGCCTTGGCTTTCTATTTGAGACAACTTCCACATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp GGGATGTGGAAGTTGTCTCAAATAGAAAGCCAAGGCTGTCTTTTGCCTTTCCTACTGCTGATGGACTACTaGTCTGTTTCCAGAGCAGGA +
Preference number: 2 (lower is better)
Translates to: GMWKLSQIESQGCLLPFLLLMDY*SVSRAG
Trigger: TCCTGCTCTGGAAACAGACCAGTAGTCCATCAGCAG...TAGGAAAGGCAAAAGACAGCCTTGGCTTTCTATTTGAGACAACTTCCACATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 90 bp CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCATTTCTCCTTAAATaGCCCTTCTGGGGCCTGGACAGGGTTAGGGAGGATGGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: LSFFLSFFLSSFLLK*PFWGLDRVREDGWP
Trigger: TGGCCAGCCATCCTCCCTAACCCTGTCCAGGCCCCAGAAGGGCAATTTAAGGAGAAATGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp TTTGGAAAACTAACAATGTGTAAAGAACCCAAACCTTACAAAGCCAGGGGCACTCTGCCATGGGAAGATTaGGAGGGTTCCAGTTTGGGA +
Preference number: 2 (lower is better)
Translates to: FGKLTMCKEPKPYKARGTLPWED*EGSSLG
Trigger: TCCCAAACTGGAACCCTCCCAATCTTCCCATGGCAG...AGTGCCCCTGGCTTTGTAAGGTTTGGGTTCTTTACACATTGTTAGTTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp TTTGGAAAACTAACAATGTGTAAAGAACCCAAACCTTACAAAGCCAGGGGCACTCCACAAGTCCAGCTTTaGCCCACTGTGTTCTCAGTC +
Preference number: 2 (lower is better)
Translates to: FGKLTMCKEPKPYKARGTPQVQL*PTVFSV
Trigger: GACTGAGAACACAGTGGGCCAAAGCTGGACTTGTGG...AGTGCCCCTGGCTTTGTAAGGTTTGGGTTCTTTACACATTGTTAGTTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp TTTGGAAAACTAACAATGTGTAAAGAACCCAAACCTTACAAAGCCAGGGGCACTTTCCATCTGTCAGGCTaGGGTAGGAGGGATGAGACA +
Preference number: 2 (lower is better)
Translates to: FGKLTMCKEPKPYKARGTFHLSG*GRRDET
Trigger: TGTCTCATCCCTCCTACCCCAGCCTGACAGATGGAA...AGTGCCCCTGGCTTTGTAAGGTTTGGGTTCTTTACACATTGTTAGTTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR TCA 90 bp GTTGATGCTCTTGCCTCAGACTCCCAAGTACAGTCCTTACAGACATGTGCTACTTTGATGTCTAACTTCTaGGCCTGCTTTAAAAGTCAG +
Preference number: 2 (lower is better)
Translates to: VDALASDSQVQSLQTCATLMSNF*ACFKSQ
Trigger: CTGACTTTTAAAGCAGGCTCAGAAGTTAGACATCAA...AGTAGCACATGTCTGTAAGGACTGTACTTGGGAGTCTGAGGCAAGAGCATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR TCA 90 bp GGGATGTGGAAGTTGTCTCAAATAGAAAGCCAAGGCTGTCTTTTGCCTTTCCTATTGGCCCTAGGTGTCTaGACAATGGTTCTTTCTTTC +
Preference number: 2 (lower is better)
Translates to: GMWKLSQIESQGCLLPFLLALGV*TMVLSF
Trigger: GAAAGAAAGAACCATTGTTCAGACACCTAGGGCCAA...TAGGAAAGGCAAAAGACAGCCTTGGCTTTCTATTTGAGACAACTTCCACATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR TCA 90 bp GGGATGTGGAAGTTGTCTCAAATAGAAAGCCAAGGCTGTCTTTTGCCTTTCCTACAGGACCCACCTCATTaGTTTGCTTGTATTTCCAAC +
Preference number: 2 (lower is better)
Translates to: GMWKLSQIESQGCLLPFLQDPPH*FACISN
Trigger: GTTGGAAATACAAGCAAATCAATGAGGTGGGTCCTG...TAGGAAAGGCAAAAGACAGCCTTGGCTTTCTATTTGAGACAACTTCCACATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp TTTGGAAAACTAACAATGTGTAAAGAACCCAAACCTTACAAAGCCAGGGGCACTGTGAGGGCTCTTTTCTaGTCTCAGGATCTAGGACTC +
Preference number: 2 (lower is better)
Translates to: FGKLTMCKEPKPYKARGTVRALF*SQDLGL
Trigger: GAGTCCTAGATCCTGAGAGCAGAAAAGAGCCCTCAC...AGTGCCCCTGGCTTTGTAAGGTTTGGGTTCTTTACACATTGTTAGTTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp GGGATGTGGAAGTTGTCTCAAATAGAAAGCCAAGGCTGTCTTTTGCCTTTCCTACATTCTTACTCTTGTTaGCAGGTGAGGGCTCTTTTC +
Preference number: 2 (lower is better)
Translates to: GMWKLSQIESQGCLLPFLHSYSC*QVRALF
Trigger: GAAAAGAGCCCTCACCTGGCAACAAGAGTAAGAATG...TAGGAAAGGCAAAAGACAGCCTTGGCTTTCTATTTGAGACAACTTCCACATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp GAGAGCTTCCCCTGGGGAGTAACATGTATAAAGCACCATGTCTATTCTAGAAATGTAACCCTGGCACTGTaGTTGCACAGTGATTACATG +
Preference number: 2 (lower is better)
Translates to: ESFPWGVTCIKHHVYSRNVTLAL*LHSDYM
Trigger: CATGTAATCACTGTGCAAGCACAGTGCCAGGGTTAC...ATTTCTAGAATAGACATGGTGCTTTATACATGTTACTCCCCAGGGGAAGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp AAGAGTCCTTGGTTTCTCACTCCAGGCATCTTAGACTTGGATCCTATTAAAAATGGCAGCAAGAGTTTCTaGCAGTTCTTGGCAAGCCTG +
Preference number: 2 (lower is better)
Translates to: KSPWFLTPGILDLDPIKNGSKSF*QFLASL
Trigger: CAGGCTTGCCAAGAACTGGCAGAAACTCTTGCTGCC...ATTTTTAATAGGATCCAAGTCTAAGATGCCTGGAGTGAGAAACCAAGGACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp TGGCCCCAGGAAACTCTCCCTATGGTCCATGAAGAAACAGAAGCTGAAAGAGCTTTTTCATATAGGGTCTaGTCATGTACTTCAAGCTGT +
Preference number: 2 (lower is better)
Translates to: WPQETLPMVHEETEAERAFSYRV*SCTSSC
Trigger: ACAGCTTGAAGTACATGACCAGACCCTATATGAAAA...AGCTCTTTCAGCTTCTGTTTCTTCATGGACCATAGGGAGAGTTTCCTGGGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp AAGAGTCCTTGGTTTCTCACTCCAGGCATCTTAGACTTGGATCCTATTAAAAATCCCTGGCACTGTGCTTaGACAGTGATTACATGCTGT +
Preference number: 2 (lower is better)
Translates to: KSPWFLTPGILDLDPIKNPWHCA*TVITCC
Trigger: ACAGCATGTAATCACTGTGCAAGCACAGTGCCAGGG...ATTTTTAATAGGATCCAAGTCTAAGATGCCTGGAGTGAGAAACCAAGGACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR TCA 90 bp AAGAGTCCTTGGTTTCTCACTCCAGGCATCTTAGACTTGGATCCTATTAAAAATTGGAAGCTGGATCAGTaGCACTGGAACATCAATCAC +
Preference number: 2 (lower is better)
Translates to: KSPWFLTPGILDLDPIKNWKLDQ*HWNINH
Trigger: GTGATTGATGTTCCAGTGTCACTGATCCAGCTTCCA...ATTTTTAATAGGATCCAAGTCTAAGATGCCTGGAGTGAGAAACCAAGGACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp TTTGGAAAACTAACAATGTGTAAAGAACCCAAACCTTACAAAGCCAGGGGCACTTCTCCATACATCTCATaGCATACTCTGCCCCAAACA +
Preference number: 2 (lower is better)
Translates to: FGKLTMCKEPKPYKARGTSPYIS*HTLPQT
Trigger: TGTTTGGGGCAGAGTATGGCATGAGATGTATGGAGA...AGTGCCCCTGGCTTTGTAAGGTTTGGGTTCTTTACACATTGTTAGTTTTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp GGGATGTGGAAGTTGTCTCAAATAGAAAGCCAAGGCTGTCTTTTGCCTTTCCTACCTAAAAATACTCATTaGAATCTCAAGGGAACTGGG +
Preference number: 2 (lower is better)
Translates to: GMWKLSQIESQGCLLPFLPKNTH*NLKGTG
Trigger: CCCAGTTCCCTTGAGATTCCAATGAGTATTTTTAGG...TAGGAAAGGCAAAAGACAGCCTTGGCTTTCTATTTGAGACAACTTCCACATCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR TCA 90 bp TTTGGAAAACTAACAATGTGTAAAGAACCCAAACCTTACAAAGCCAGGGGCACTAGTCCACACCTACCTTaGATTTTGTTGATCTGTTGG +
Preference number: 2 (lower is better)
Translates to: FGKLTMCKEPKPYKARGTSPHLP*ILLICW
Trigger: CCAACAGATCAACAAAATTCAAGGTAGGTGTGGACT...AGTGCCCCTGGCTTTGTAAGGTTTGGGTTCTTTACACATTGTTAGTTTTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR TCA 90 bp TTTGGAAAACTAACAATGTGTAAAGAACCCAAACCTTACAAAGCCAGGGGCACTTGTAGGCCAGCAAGTTaGGTTTGCTACTTGCTTAAA +
Preference number: 2 (lower is better)
Translates to: FGKLTMCKEPKPYKARGTCRPAS*VCYLLK
Trigger: TTTAAGCAAGTAGCAAACTCAACTTGCTGGCCTACA...AGTGCCCCTGGCTTTGTAAGGTTTGGGTTCTTTACACATTGTTAGTTTTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp CACTTTCATGGCATTTACACCAATCCTTTGCCAAGATTTCCAGCTGGTTGCCACTGCACAGTGATTACATaGTGTATTAATTCACCATCT +
Preference number: 2 (lower is better)
Translates to: HFHGIYTNPLPRFPAGCHCTVIT*CINSPS
Trigger: AGATGGTGAATTAATACAGCATGTAATCACTGTGCA...GTGGCAACCAGCTGGAAATCTTGGCAAAGGATTGGTGTAAATGCCATGAAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR GCA 90 bp TTTGGAAAACTAACAATGTGTAAAGAACCCAAACCTTACAAAGCCAGGGGCACTCCCACCTCATTGATTTaGTTGTATTTCCAACAGGGA +
Preference number: 2 (lower is better)
Translates to: FGKLTMCKEPKPYKARGTPTSLI*LYFQQG
Trigger: TCCCTGTTGGAAATACAAGCAAATCAATGAGGTGGG...AGTGCCCCTGGCTTTGTAAGGTTTGGGTTCTTTACACATTGTTAGTTTTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CCA 90 bp CACTTTCATGGCATTTACACCAATCCTTTGCCAAGATTTCCAGCTGGTTGCCACAACCTTAAAATGTGGTaGGGAAGAGAATTTGAAACA +
Preference number: 2 (lower is better)
Translates to: HFHGIYTNPLPRFPAGCHNLKMW*GREFET
Trigger: TGTTTCAAATTCTCTTCCCCACCACATTTTAAGGTT...GTGGCAACCAGCTGGAAATCTTGGCAAAGGATTGGTGTAAATGCCATGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 72 bp CCCCGGAGGACAGAAGGCTTCTGTGCCTCAACTCCCTaGCTGTCCATGCTGGCTGCTAGAGGCTCCTGGCTA +
Preference number: 3 (lower is better)
Translates to: PRRTEGFCASTP*LSMLAARGSWL
Trigger: TAGCCAGGAGCCTCTAGCAGCCAGCATGGACAGGCAGGGAGTTGAGGCACAGAAGCCTTCTGTCCTCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CCA 72 bp GGCTGCCTTTCTGCCTGCCCTCAGAGGTGCCTACAGTaGGAGAAGTCAAGCCTGAGTAGGAGGCTTGGGGCC +
Preference number: 3 (lower is better)
Translates to: GCLSACPQRCLQ*EKSSLSRRLGA
Trigger: GGCCCCAAGCCTCCTACTCAGGCTTGACTTCTCCCACTGTAGGCACCTCTGAGGGCAGGCAGAAAGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 72 bp GGCGCCATCAAGCCTGCCAGGGAAACCCATGTGCAGTaGGGTGAGAGAACGGGACCGGAGTCAACATGCCTG +
Preference number: 3 (lower is better)
Translates to: GAIKPARETHVQ*GERTGPESTCL
Trigger: CAGGCATGTTGACTCCGGTCCCGTTCTCTCACCTCACTGCACATGGGTTTCCCTGGCAGGCTTGATGGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 72 bp TTCCATCTGTCAGGCTGGGGTAGGAGGGATGAGACATaGCCAGCAAGGTCAGCTGAGTGGGGTCATGGAGGG +
Preference number: 3 (lower is better)
Translates to: FHLSGWGRRDET*PARSAEWGHGG
Trigger: CCCTCCATGACCCCACTCAGCTGACCTTGCTGGTCATGTCTCATCCCTCCTACCCCAGCCTGACAGATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 72 bp AACCAGGCGCCATCAAGCCTGCCAGGGAAACCCATGTaGAGTGAGGTGAGAGAACGGGACCGGAGTCAACAT +
Preference number: 3 (lower is better)
Translates to: NQAPSSLPGKPM*SEVRERDRSQH
Trigger: ATGTTGACTCCGGTCCCGTTCTCTCACCTCACTGCACATGGGTTTCCCTGGCAGGCTTGATGGCGCCTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CAA 90 bp GGGCTGCCTTTCTGCCTGCCCTCAGAGGTGCCTACAGTGGGAGAAGTCAAGCCTTCCCTGGGTTGGTGTTaGGGACTAATTCAGGGACTA +
Preference number: 3 (lower is better)
Translates to: GLPFCLPSEVPTVGEVKPSLGWC*GLIQGL
Trigger: TAGTCCCTGAATTAGTCCCAAACACCAACCCAGGGA...AGGCTTGACTTCTCCCACTGTAGGCACCTCTGAGGGCAGGCAGAAAGGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 72 bp GCCCTCAGAGGTGCCTACAGTGGGAGAAGTCAAGCCTaGGTAGGAGGCTTGGGGCCAATTCAAAGCCACTGT +
Preference number: 3 (lower is better)
Translates to: ALRGAYSGRSQA*VGGLGPIQSHC
Trigger: ACAGTGGCTTTGAATTGGCCCCAAGCCTCCTACTCAGGCTTGACTTCTCCCACTGTAGGCACCTCTGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 72 bp CATCAAGCCTGCCAGGGAAACCCATGTGCAGTGAGGTaGGAGAACGGGACCGGAGTCAACATGCCTGTCTCA +
Preference number: 3 (lower is better)
Translates to: HQACQGNPCAVR*ENGTGVNMPVS
Trigger: TGAGACAGGCATGTTGACTCCGGTCCCGTTCTCTCACCTCACTGCACATGGGTTTCCCTGGCAGGCTTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 72 bp GAATTCTGCTGCCTGCCAGGATGCCTGTGGGACCCCTaGCTATGCAATGAGTTGCCCAGAGTCCTGCCATCT +
Preference number: 3 (lower is better)
Translates to: EFCCLPGCLWDP*LCNELPRVLPS
Trigger: AGATGGCAGGACTCTGGGCAACTCATTGCATAGTCAGGGGTCCCACAGGCATCCTGGCAGGCAGCAGAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 72 bp TTACAGTGTGGTGTCCATGGGACTGGCGGGACCCTGTaGAGCAGAGTTCCAGAATCTTGCCAGGTCTCAGGC +
Preference number: 3 (lower is better)
Translates to: LQCGVHGTGGTL*SRVPESCQVSG
Trigger: GCCTGAGACCTGGCAAGATTCTGGAACTCTGCTTCACAGGGTCCCGCCAGTCCCATGGACACCACACTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 72 bp GTTTCAATCCAGGCATCTCCTCCCCAAGAGGTCCCCTaGCCAAGGGCAGCAAGAGTTTCTGCCAGTTCTTGG +
Preference number: 3 (lower is better)
Translates to: VSIQASPPQEVP*PRAARVSASSW
Trigger: CCAAGAACTGGCAGAAACTCTTGCTGCCCTTGGGCAGGGGACCTCTTGGGGAGGAGATGCCTGGATTGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CAA 90 bp GGCACAGGTCTGGGCACACGGTCAGGTGCTTGGACTCTTTCCCCAAATGCTTCAGGAGAAATGGCCTCCTaGTCTGCCATGGGAAGATTG +
Preference number: 3 (lower is better)
Translates to: GTGLGTRSGAWTLSPNASGEMAS*SAMGRL
Trigger: CAATCTTCCCATGGCAGACAAGGAGGCCATTTCTCC...TGAAGCATTTGGGGAAAGAGTCCAAGCACCTGACCGTGTGCCCAGACCTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 72 bp AGAACGGGACCGGAGTCAACATGCCTGTCTCAGCTGTaGCACTTTGGAGAGGCCTTTCCTCTTTCTGGACCT +
Preference number: 3 (lower is better)
Translates to: RTGPESTCLSQL*HFGEAFPLSGP
Trigger: AGGTCCAGAAAGAGGAAAGGCCTCTCCAAAGTGGCACAGCTGAGACAGGCATGTTGACTCCGGTCCCGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 72 bp GGGACCCCTGACTATGCAATGAGTTGCCCAGAGTCCTaGCATCTCAGAAGGGAGATGTCTGCCAACCTAAGC +
Preference number: 3 (lower is better)
Translates to: GTPDYAMSCPES*HLRREMSANLS
Trigger: GCTTAGGTTGGCAGACATCTCCCTTCTGAGATGGCAGGACTCTGGGCAACTCATTGCATAGTCAGGGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 72 bp CAGGATGCCTGTGGGACCCCTGACTATGCAATGAGTTaGCCAGAGTCCTGCCATCTCAGAAGGGAGATGTCT +
Preference number: 3 (lower is better)
Translates to: QDACGTPDYAMS*PESCHLRREMS
Trigger: AGACATCTCCCTTCTGAGATGGCAGGACTCTGGGCAACTCATTGCATAGTCAGGGGTCCCACAGGCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 72 bp GGCACTGGTGGGACAAAGTACCTGAGCTTCCAGGCTTaGCCAAGTCTGGACTGGACAAGACTAGGACATTGC +
Preference number: 3 (lower is better)
Translates to: GTGGTKYLSFQA*PSLDWTRLGHC
Trigger: GCAATGTCCTAGTCTTGTCCAGTCCAGACTTGGGCAAGCCTGGAAGCTCAGGTACTTTGTCCCACCAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CCA 72 bp CTGGAGAAATGGCCTCCTTGTCTGCCATGGGAAGATTaGGAGGGTTCCAGTTTGGGAAATCTGCCTCCCCTG +
Preference number: 3 (lower is better)
Translates to: LEKWPPCLPWED*EGSSLGNLPPL
Trigger: CAGGGGAGGCAGATTTCCCAAACTGGAACCCTCCCAATCTTCCCATGGCAGACAAGGAGGCCATTTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CCA 72 bp CAGGGGGAGCTGGAGAAATGGCCTCCTTGTCTGCCATaGGAAGATTGGGAGGGTTCCAGTTTGGGAAATCTG +
Preference number: 3 (lower is better)
Translates to: QGELEKWPPCLP*EDWEGSSLGNL
Trigger: CAGATTTCCCAAACTGGAACCCTCCCAATCTTCCCATGGCAGACAAGGAGGCCATTTCTCCAGCTCCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CCA 72 bp CCAAGATTTCCAGCTGGTTGCCACATCTTCAGCCAGTaGACCCTGGGGCCTTGCATACTATGCGTCTACCTC +
Preference number: 3 (lower is better)
Translates to: PRFPAGCHIFSQ*TLGPCILCVYL
Trigger: GAGGTAGACGCATAGTATGCAAGGCCCCAGGGTCCACTGGCTGAAGATGTGGCAACCAGCTGGAAATCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 72 bp ATCTTCAGCCAGTGGACCCTGGGGCCTTGCATACTATaGGTCTACCTCCACCTGGAGAACTCTACTCTCAGA +
Preference number: 3 (lower is better)
Translates to: IFSQWTLGPCIL*VYLHLENSTLR
Trigger: TCTGAGAGTAGAGTTCTCCAGGTGGAGGTAGACGCATAGTATGCAAGGCCCCAGGGTCCACTGGCTGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CCA 72 bp ACCGGAGTCAACATGCCTGTCTCAGCTGTGCCACTTTaGAGAGGCCTTTCCTCTTTCTGGACCTTAGCGTCA +
Preference number: 3 (lower is better)
Translates to: TGVNMPVSAVPL*RGLSSFWTLAS
Trigger: TGACGCTAAGGTCCAGAAAGAGGAAAGGCCTCTCCAAAGTGGCACAGCTGAGACAGGCATGTTGACTCCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CAA 90 bp TTCTCAGTCAGACCCCGGAGGACAGAAGGCTTCTGTGCCTCAACTCCCTGCCTGGAGCAAGGGTATTTTTaGTATCACCCTAATCCAGGG +
Preference number: 3 (lower is better)
Translates to: FSVRPRRTEGFCASTPCLEQGYF*YHPNPG
Trigger: CCCTGGATTAGGGTGATACAAAAAATACCCTTGCTC...CAGGCAGGGAGTTGAGGCACAGAAGCCTTCTGTCCTCCGGGGTCTGACTGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 72 bp ATGGGGGAGGGGTGTAGAGAGGCTTTAGCTGAGTACTaGATCTACAGGCTTAGATGGCCAGCCAGGGTGATA +
Preference number: 3 (lower is better)
Translates to: MGEGCREALAEY*IYRLRWPARVI
Trigger: TATCACCCTGGCTGGCCATCTAAGCCTGTAGATTCAGTACTCAGCTAAAGCCTCTCTACACCCCTCCCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 72 bp CTCTCTATAGGCAAAGTCTGCCTTTGGAGACAGTGGTaGGGAGCTGACATTGCCTGGAAAGGGCCAGATAGG +
Preference number: 3 (lower is better)
Translates to: LSIGKVCLWRQW*GADIAWKGPDR
Trigger: CCTATCTGGCCCTTTCCAGGCAATGTCAGCTCCTCACCACTGTCTCCAAAGGCAGACTTTGCCTATAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CCA 72 bp ATTCAAAGCCACTGTCTACACAGGTCACAGAGGTCATaGGAACCTGGGTTCCTTCCCTGGGTTGGTGTTTGG +
Preference number: 3 (lower is better)
Translates to: IQSHCLHRSQRS*EPGFLPWVGVW
Trigger: CCAAACACCAACCCAGGGAAGGAACCCAGGTTCCCATGACCTCTGTGACCTGTGTAGACAGTGGCTTTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CAA 90 bp GGCACAGGTCTGGGCACACGGTCAGGTGCTTGGACTCTTTCCCCAAATGCTTCATCATTCTTACTCTTGTaGCCAGGTGAGGGCTCTTTT +
Preference number: 3 (lower is better)
Translates to: GTGLGTRSGAWTLSPNASSFLLL*PGEGSF
Trigger: AAAAGAGCCCTCACCTGGCAACAAGAGTAAGAATGA...TGAAGCATTTGGGGAAAGAGTCCAAGCACCTGACCGTGTGCCCAGACCTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 72 bp CACTTCCCAGCCCTAACCAGGTTTACCAGCCCCTCTTaGATGGAAGCTGGATCAGTGACACTGGAACATCAA +
Preference number: 3 (lower is better)
Translates to: HFPALTRFTSPS*MEAGSVTLEHQ
Trigger: TTGATGTTCCAGTGTCACTGATCCAGCTTCCATTCAAGAGGGGCTGGTAAACCTGGTTAGGGCTGGGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 72 bp CTCGAGCTTGATCTCCATACATCTCATGCCATACTCTaGCCCAAACAGGGGAATCTGGCCTGTGTGTTTCCA +
Preference number: 3 (lower is better)
Translates to: LELDLHTSHAIL*PKQGNLACVFP
Trigger: TGGAAACACACAGGCCAGATTCCCCTGTTTGGGGCAGAGTATGGCATGAGATGTATGGAGATCAAGCTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 72 bp GCCAGGGGCACTTTCATGGCATTTACACCAATCCTTTaGCAAGATTTCCAGCTGGTTGCCACATCTTCAGCC +
Preference number: 3 (lower is better)
Translates to: ARGTFMAFTPIL*QDFQLVATSSA
Trigger: GGCTGAAGATGTGGCAACCAGCTGGAAATCTTGGCAAAGGATTGGTGTAAATGCCATGAAAGTGCCCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CAA 90 bp GGGATGTGGAAGTTGTCTCAAATAGAAAGCCAAGGCTGTCTTTTGCCTTTCCTATGGGAGGGTTCCAGTTaGGGAAATCTGCCTCCCCTG +
Preference number: 3 (lower is better)
Translates to: GMWKLSQIESQGCLLPFLWEGSS*GNLPPL
Trigger: CAGGGGAGGCAGATTTCCCAAACTGGAACCCTCCCA...TAGGAAAGGCAAAAGACAGCCTTGGCTTTCTATTTGAGACAACTTCCACATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 72 bp ATAGCGCTCTGCACGATCCGTTTGATGTCTAACTTCTaGGCCTGCTTTAAAAGTCAGCTAAGCCCCTTCCCG +
Preference number: 3 (lower is better)
Translates to: IALCTIRLMSNF*ACFKSQLSPFP
Trigger: CGGGAAGGGGCTTAGCTGACTTTTAAAGCAGGCTCAGAAGTTAGACATCAAACGGATCGTGCAGAGCGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 72 bp GCCCATGTGTGTAACCCTGGCACTGTGCTTGCACAGTaGTTACATGCTGTATTAATTCACCATCTTGGCCCC +
Preference number: 3 (lower is better)
Translates to: AHVCNPGTVLAQ*LHAVLIHHLGP
Trigger: GGGGCCAAGATGGTGAATTAATACAGCATGTAATCACTGTGCAAGCACAGTGCCAGGGTTACACACATGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 72 bp CACATGCTCCCATCATGGTGGCCTGTGGTGTCAATATaGTACACAGAATTATCCTCCTGGCCCCAGGAAACT +
Preference number: 3 (lower is better)
Translates to: HMLPSWWPVVSI*YTELSSWPQET
Trigger: AGTTTCCTGGGGCCAGGAGGATAATTCTGTGTATCATATTGACACCACAGGCCACCATGATGGGAGCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 72 bp AGAGGTGATAAAGAACACCACAAACATGGTGAGAGCTaGGGCCAGTTTGGTACAGTGAGGCACAGTGGGGTA +
Preference number: 3 (lower is better)
Translates to: RGDKEHHKHGES*GQFGTVRHSGV
Trigger: TACCCCACTGTGCCTCACTGTACCAAACTGGCCTCAGCTCTCACCATGTTTGTGGTGTTCTTTATCACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR GCA 72 bp TGCGTCTACCTCCACCTGGAGAACTCTACTCTCAGATaGTATCCTTTAGCAGCTAGGGATGTGGAAGTTGTC +
Preference number: 3 (lower is better)
Translates to: CVYLHLENSTLR*YPLAARDVEVV
Trigger: GACAACTTCCACATCCCTAGCTGCTAAAGGATAGCATCTGAGAGTAGAGTTCTCCAGGTGGAGGTAGACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CCA 72 bp CCTAACCAGGTTTACCAGCCCCTCTTGAATGGAAGCTaGATCAGTGACACTGGAACATCAATCACCCACTTG +
Preference number: 3 (lower is better)
Translates to: PNQVYQPLLNGS*ISDTGTSITHL
Trigger: CAAGTGGGTGATTGATGTTCCAGTGTCACTGATCCAGCTTCCATTCAAGAGGGGCTGGTAAACCTGGTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CCA 72 bp TCAGCTGTGCCACTTTGGAGAGGCCTTTCCTCTTTCTaGACCTTAGCGTCATTCTTACTCTTGTTGCCAGGT +
Preference number: 3 (lower is better)
Translates to: SAVPLWRGLSSF*TLASFLLLLPG
Trigger: ACCTGGCAACAAGAGTAAGAATGACGCTAAGGTCCAGAAAGAGGAAAGGCCTCTCCAAAGTGGCACAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CAA 90 bp GGGATGTGGAAGTTGTCTCAAATAGAAAGCCAAGGCTGTCTTTTGCCTTTCCTAGCCACAAGTCCAGCTTaGGCCCACTGTGTTCTCAGT +
Preference number: 3 (lower is better)
Translates to: GMWKLSQIESQGCLLPFLATSPA*AHCVLS
Trigger: ACTGAGAACACAGTGGGCCAAAGCTGGACTTGTGGC...TAGGAAAGGCAAAAGACAGCCTTGGCTTTCTATTTGAGACAACTTCCACATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CAA 90 bp CACTTTCATGGCATTTACACCAATCCTTTGCCAAGATTTCCAGCTGGTTGCCACGCGTCATTCTTACTCTaGTTGCCAGGTGAGGGCTCT +
Preference number: 3 (lower is better)
Translates to: HFHGIYTNPLPRFPAGCHASFLL*LPGEGS
Trigger: AGAGCCCTCACCTGGCAACAAGAGTAAGAATGACGC...GTGGCAACCAGCTGGAAATCTTGGCAAAGGATTGGTGTAAATGCCATGAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 72 bp TTAGAACTCACTGTGCATCCCAGTCTGGACCTCTTATaGTGCTTGTTGATGCTCTTGCCTCAGACTCCCAAG +
Preference number: 3 (lower is better)
Translates to: LELTVHPSLDLL*CLLMLLPQTPK
Trigger: CTTGGGAGTCTGAGGCAAGAGCATCAACAAGCATCATAAGAGGTCCAGACTGGGATGCACAGTGAGTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CAA 90 bp CACTTTCATGGCATTTACACCAATCCTTTGCCAAGATTTCCAGCTGGTTGCCACTCATTTCTCCTTAAATaGCCCTTCTGGGGCCTGGAC +
Preference number: 3 (lower is better)
Translates to: HFHGIYTNPLPRFPAGCHSFLLK*PFWGLD
Trigger: GTCCAGGCCCCAGAAGGGCAATTTAAGGAGAAATGA...GTGGCAACCAGCTGGAAATCTTGGCAAAGGATTGGTGTAAATGCCATGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CAA 90 bp GGGATGTGGAAGTTGTCTCAAATAGAAAGCCAAGGCTGTCTTTTGCCTTTCCTAGGTTCCTTCCCTGGGTaGGTGTTTGGGACTAATTCA +
Preference number: 3 (lower is better)
Translates to: GMWKLSQIESQGCLLPFLGSFPG*VFGTNS
Trigger: TGAATTAGTCCCAAACACCAACCCAGGGAAGGAACC...TAGGAAAGGCAAAAGACAGCCTTGGCTTTCTATTTGAGACAACTTCCACATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CAA 90 bp TTTGGAAAACTAACAATGTGTAAAGAACCCAAACCTTACAAAGCCAGGGGCACTTCTGCCATGGGAAGATaGGGAGGGTTCCAGTTTGGG +
Preference number: 3 (lower is better)
Translates to: FGKLTMCKEPKPYKARGTSAMGR*GGFQFG
Trigger: CCCAAACTGGAACCCTCCCAATCTTCCCATGGCAGA...AGTGCCCCTGGCTTTGTAAGGTTTGGGTTCTTTACACATTGTTAGTTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CAA 90 bp TGGCCCCAGGAAACTCTCCCTATGGTCCATGAAGAAACAGAAGCTGAAAGAGCTATTTACACCAATCCTTaGCCAAGATTTCCAGCTGGT +
Preference number: 3 (lower is better)
Translates to: WPQETLPMVHEETEAERAIYTNP*PRFPAG
Trigger: ACCAGCTGGAAATCTTGGCAAAGGATTGGTGTAAAT...AGCTCTTTCAGCTTCTGTTTCTTCATGGACCATAGGGAGAGTTTCCTGGGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CCA 72 bp CATCTCATGCCATACTCTGCCCCAAACAGGGGAATCTaGCCTGTGTGTTTCCAATTCCTTTACACTTATCTC +
Preference number: 3 (lower is better)
Translates to: HLMPYSAPNRGI*PVCFQFLYTYL
Trigger: GAGATAAGTGTAAAGGAATTGGAAACACACAGGCCAGATTCCCCTGTTTGGGGCAGAGTATGGCATGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CCA 72 bp ACTGGTCTGTTTCCAGAGCAGGAAGGGAAGTTTAAGTaGCCTAGCCATACATTCTGTTTTGTGTGCAAGGTC +
Preference number: 3 (lower is better)
Translates to: TGLFPEQEGKFK*PSHTFCFVCKV
Trigger: GACCTTGCACACAAAACAGAATGTATGGCTAGGCCACTTAAACTTCCCTTCCTGCTCTGGAAACAGACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CAA 90 bp AAGAGTCCTTGGTTTCTCACTCCAGGCATCTTAGACTTGGATCCTATTAAAAATCCCTCAGTCCAGACATaGCAGACCGTGTCTTTGACC +
Preference number: 3 (lower is better)
Translates to: KSPWFLTPGILDLDPIKNPSVQT*QTVSLT
Trigger: GGTCAAAGACACGGTCTGCAATGTCTGGACTGAGGG...ATTTTTAATAGGATCCAAGTCTAAGATGCCTGGAGTGAGAAACCAAGGACTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CCA 72 bp AAGAACCCAAACCTTACAAAGCCAGGGGCACTTTCATaGCATTTACACCAATCCTTTGCCAAGATTTCCAGC +
Preference number: 3 (lower is better)
Translates to: KNPNLTKPGALS*HLHQSFAKISS
Trigger: GCTGGAAATCTTGGCAAAGGATTGGTGTAAATGCCATGAAAGTGCCCCTGGCTTTGTAAGGTTTGGGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CAA 90 bp AAGAGTCCTTGGTTTCTCACTCCAGGCATCTTAGACTTGGATCCTATTAAAAATACCCTGGCACTGTGCTaGCACAGTGATTACATGCTG +
Preference number: 3 (lower is better)
Translates to: KSPWFLTPGILDLDPIKNTLALC*HSDYML
Trigger: CAGCATGTAATCACTGTGCAAGCACAGTGCCAGGGT...ATTTTTAATAGGATCCAAGTCTAAGATGCCTGGAGTGAGAAACCAAGGACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR TCA 72 bp TGTGTTTATGAGTCTAGCCAGCAAGAACATGAAGTCTaGGAAACTGCTGATGGACTACTGGTCTGTTTCCAG +
Preference number: 3 (lower is better)
Translates to: CVYESSQQEHEV*ETADGLLVCFQ
Trigger: CTGGAAACAGACCAGTAGTCCATCAGCAGTTTCTCAGACTTCATGTTCTTGCTGGCTAGACTCATAAACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CAA 90 bp AACAGACACAGGACCCACCTCATTGATTTGCTTGTATTTCCAACAGGGAGCAAAGGAGTAGAACACAGTTaGAGGAGCAAGGGTATTTTT +
Preference number: 3 (lower is better)
Translates to: NRHRTHLIDLLVFPTGSKGVEHS*RSKGIF
Trigger: AAAAATACCCTTGCTCCTCAAACTGTGTTCTACTCC...TTTGCTCCCTGTTGGAAATACAAGCAAATCAATGAGGTGGGTCCTGTGTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CAA 90 bp AAGAGTCCTTGGTTTCTCACTCCAGGCATCTTAGACTTGGATCCTATTAAAAATAAGATTTCCAGCTGGTaGCCACATCTTCAGCCAGTG +
Preference number: 3 (lower is better)
Translates to: KSPWFLTPGILDLDPIKNKISSW*PHLQPV
Trigger: CACTGGCTGAAGATGTGGCAACCAGCTGGAAATCTT...ATTTTTAATAGGATCCAAGTCTAAGATGCCTGGAGTGAGAAACCAAGGACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CAA 90 bp AAGAGTCCTTGGTTTCTCACTCCAGGCATCTTAGACTTGGATCCTATTAAAAATCAGAGTTCCAGAATCTaGCCAGGTCTCAGGCTTAAA +
Preference number: 3 (lower is better)
Translates to: KSPWFLTPGILDLDPIKNQSSRI*PGLRLK
Trigger: TTTAAGCCTGAGACCTGGCAAGATTCTGGAACTCTG...ATTTTTAATAGGATCCAAGTCTAAGATGCCTGGAGTGAGAAACCAAGGACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR-3UTR CAA 90 bp AACAGACACAGGACCCACCTCATTGATTTGCTTGTATTTCCAACAGGGAGCAAAAAGTCCACACCTACCTaGAATTTTGTTGATCTGTTG +
Preference number: 3 (lower is better)
Translates to: NRHRTHLIDLLVFPTGSKKSTPT*NFVDLL
Trigger: CAACAGATCAACAAAATTCAAGGTAGGTGTGGACTT...TTTGCTCCCTGTTGGAAATACAAGCAAATCAATGAGGTGGGTCCTGTGTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR TCA 90 bp GGGCTGCCTTTCTGCCTGCCCTCAGAGGTGCCTACAGTGGGAGAAGTCAAGCCTGGCTGGCAGGAGAGGTaGTCTCAGGAGGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GLPFCLPSEVPTVGEVKPGWQER*SQEGEL
Trigger: CAGCTCCCCCTCCTGAGATCACCTCTCCTGCCAGCC...AGGCTTGACTTCTCCCACTGTAGGCACCTCTGAGGGCAGGCAGAAAGGCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp TGCCCTTCTGGGGCCTGGACAGGGTTAGGGAGGATGGCTGGCCACTATGCCCCTCCAGTAGAGCTCCCTTaGCAGCACGTCCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: CPSGAWTGLGRMAGHYAPPVELP*QHVLQV
Trigger: AACCTGCAGGACGTGCTGCCAAGGGAGCTCTACTGG...AGGGGCATAGTGGCCAGCCATCCTCCCTAACCCTGTCCAGGCCCCAGAAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR TCA 90 bp TGCCCTTCTGGGGCCTGGACAGGGTTAGGGAGGATGGCTGGCCACTATGCCCCTGCAACTGGCCAGGGCTaGGATGGTATAGGGATCTGT +
Preference number: 4 (lower is better)
Translates to: CPSGAWTGLGRMAGHYAPATGQG*DGIGIC
Trigger: ACAGATCCCTATACCATCTCAGCCCTGGCCAGTTGC...AGGGGCATAGTGGCCAGCCATCCTCCCTAACCCTGTCCAGGCCCCAGAAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR TCA 90 bp GGGCTGCCTTTCTGCCTGCCCTCAGAGGTGCCTACAGTGGGAGAAGTCAAGCCTGCTGTCACCTGCTCATaGGGTGGGAGGGTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GLPFCLPSEVPTVGEVKPAVTCS*GGRVVL
Trigger: CAACACCACCCTCCCACCTCATGAGCAGGTGACAGC...AGGCTTGACTTCTCCCACTGTAGGCACCTCTGAGGGCAGGCAGAAAGGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp GGCACAGGTCTGGGCACACGGTCAGGTGCTTGGACTCTTTCCCCAAATGCTTCACAGGGGCAGCGGAGGTaGCGAGATCGTAGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: GTGLGTRSGAWTLSPNASQGQRR*RDRSAV
Trigger: GACAGCACTACGATCTCGCCACCTCCGCTGCCCCTG...TGAAGCATTTGGGGAAAGAGTCCAAGCACCTGACCGTGTGCCCAGACCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR GCA 90 bp GGCACAGGTCTGGGCACACGGTCAGGTGCTTGGACTCTTTCCCCAAATGCTTCACCCACAGCGTCCTGCTaGTGGAGTTGGTGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: GTGLGTRSGAWTLSPNASPTASC*WSWCED
Trigger: GTCCTCACACCAACTCCAGCAGCAGGACGCTGTGGG...TGAAGCATTTGGGGAAAGAGTCCAAGCACCTGACCGTGTGCCCAGACCTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR GCA 90 bp GTTGATGCTCTTGCCTCAGACTCCCAAGTACAGTCCTTACAGACATGTGCTACTGAGCTGGGGGTAGGCTaGAGGGGCAGCGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: VDALASDSQVQSLQTCATELGVG*RGSGGG
Trigger: GCCACCTCCGCTGCCCCTGCAGCCTACCCCCAGCTC...AGTAGCACATGTCTGTAAGGACTGTACTTGGGAGTCTGAGGCAAGAGCATCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 72 bp GACTGGCGGGACCCTGTGAAGCAGAGTTCCAGAATCTaGCCAGGTCTCAGGCTTAAACCTGTCCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: DWRDPVKQSSRI*PGLRLKPVHWG
Trigger: GCCCCAGTGGACAGGTTTAAGCCTGAGACCTGGCAAGATTCTGGAACTCTGCTTCACAGGGTCCCGCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp TGGCCCCAGGAAACTCTCCCTATGGTCCATGAAGAAACAGAAGCTGAAAGAGCTCCATGGGGCAGCAGCTaGCAACTGGCCAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: WPQETLPMVHEETEAERAPWGSS*QLARAE
Trigger: CTCAGCCCTGGCCAGTTGCCAGCTGCTGCCCCATGG...AGCTCTTTCAGCTTCTGTTTCTTCATGGACCATAGGGAGAGTTTCCTGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp TGGCCCCAGGAAACTCTCCCTATGGTCCATGAAGAAACAGAAGCTGAAAGAGCTAGCGGCTGGGGTTGCTaGAGCTGGGCTGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: WPQETLPMVHEETEAERASGWGC*SWAGRR
Trigger: TCTCCTGCCAGCCCAGCTCCAGCAACCCCAGCCGCT...AGCTCTTTCAGCTTCTGTTTCTTCATGGACCATAGGGAGAGTTTCCTGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp TGCTGTATTAATTCACCATCTTGGCCCCACGCCTGGCACAGGTCTGGGCACACGACAGCGTCCTGCTGCTaGAGTTGGTGTGAGGACTTG +
Preference number: 4 (lower is better)
Translates to: CCINSPSWPHAWHRSGHTTASCC*SWCEDL
Trigger: CAAGTCCTCACACCAACTCCAGCAGCAGGACGCTGT...CGTGTGCCCAGACCTGTGCCAGGCGTGGGGCCAAGATGGTGAATTAATACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 72 bp TGGTTGCCACATCTTCAGCCAGTGGACCCTGGGGCCTaGCATACTATGCGTCTACCTCCACCTGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: WLPHLQPVDPGA*HTMRLPPPGEL
Trigger: GAGTTCTCCAGGTGGAGGTAGACGCATAGTATGCAAGGCCCCAGGGTCCACTGGCTGAAGATGTGGCAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR TCA 90 bp GGCACAGGTCTGGGCACACGGTCAGGTGCTTGGACTCTTTCCCCAAATGCTTCACATTCCTCTTGTAGATaGGCTCCTGCCGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: GTGLGTRSGAWTLSPNASHSSCR*APAGSS
Trigger: GCTACTTCCGGCAGGAGCTCATCTACAAGAGGAATG...TGAAGCATTTGGGGAAAGAGTCCAAGCACCTGACCGTGTGCCCAGACCTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR GCA 90 bp GGCACAGGTCTGGGCACACGGTCAGGTGCTTGGACTCTTTCCCCAAATGCTTCACAAAGTAGACGTGAGTaGTGGCCTGGAAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GTGLGTRSGAWTLSPNASQSRRE*WPGRLL
Trigger: AAGCAGCCTTCCAGGCCAGCACTCACGTCTACTTTG...TGAAGCATTTGGGGAAAGAGTCCAAGCACCTGACCGTGTGCCCAGACCTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR GCA 90 bp TGGCCCCAGGAAACTCTCCCTATGGTCCATGAAGAAACAGAAGCTGAAAGAGCTCTTGGCAGCACGTCCTaGAGGTTCTCCCCATGGGGC +
Preference number: 4 (lower is better)
Translates to: WPQETLPMVHEETEAERALGSTS*RFSPWG
Trigger: GCCCCATGGGGAGAACCTGCAGGACGTGCTGCCAAG...AGCTCTTTCAGCTTCTGTTTCTTCATGGACCATAGGGAGAGTTTCCTGGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp TGGCCCCAGGAAACTCTCCCTATGGTCCATGAAGAAACAGAAGCTGAAAGAGCTCTCAGGAGGGGGAGCTaGGCTTCCAACAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: WPQETLPMVHEETEAERALRRGS*ASNSSR
Trigger: CCTGCTGCTGTTGGAAGCCCAGCTCCCCCTCCTGAG...AGCTCTTTCAGCTTCTGTTTCTTCATGGACCATAGGGAGAGTTTCCTGGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 72 bp CCTTGTCTGCCATGGGAAGATTGGGAGGGTTCCAGTTaGGGAAATCTGCCTCCCCTGGTTCTTCTCCTGACC +
Preference number: 4 (lower is better)
Translates to: PCLPWEDWEGSS*GNLPPLVLLLT
Trigger: GGTCAGGAGAAGAACCAGGGGAGGCAGATTTCCCAAACTGGAACCCTCCCAATCTTCCCATGGCAGACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 72 bp GCTGGAGAAATGGCCTCCTTGTCTGCCATGGGAAGATaGGGAGGGTTCCAGTTTGGGAAATCTGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: AGEMASLSAMGR*GGFQFGKSASP
Trigger: AGGGGAGGCAGATTTCCCAAACTGGAACCCTCCCAATCTTCCCATGGCAGACAAGGAGGCCATTTCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 72 bp GGCTTGCCCAAGTCTGGACTGGACAAGACTAGGACATaGCCGGTGACCACACTCCATGTGAGAAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: GLPKSGLDKTRT*PVTTLHVRRMC
Trigger: GCACATCCTTCTCACATGGAGTGTGGTCACCGGCAATGTCCTAGTCTTGTCCAGTCCAGACTTGGGCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 72 bp GGGCACTGGTGGGACAAAGTACCTGAGCTTCCAGGCTaGCCCAAGTCTGGACTGGACAAGACTAGGACATTG +
Preference number: 4 (lower is better)
Translates to: GHWWDKVPELPG*PKSGLDKTRTL
Trigger: CAATGTCCTAGTCTTGTCCAGTCCAGACTTGGGCAAGCCTGGAAGCTCAGGTACTTTGTCCCACCAGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR TCA 90 bp TGCTGTATTAATTCACCATCTTGGCCCCACGCCTGGCACAGGTCTGGGCACACGGTTGGTGTGAGGACTTaGCAAAGGGCTTGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: CCINSPSWPHAWHRSGHTVGVRT*QRAWWF
Trigger: AAACCACCAAGCCCTTTGTCAAGTCCTCACACCAAC...CGTGTGCCCAGACCTGTGCCAGGCGTGGGGCCAAGATGGTGAATTAATACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR GCA 90 bp CACTTTCATGGCATTTACACCAATCCTTTGCCAAGATTTCCAGCTGGTTGCCACCTCTGTGGTGTAGGGTaGCTGCAGGCTCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: HFHGIYTNPLPRFPAGCHLCGVG*LQAPSP
Trigger: CGGGCTGGGAGCCTGCAGGCACCCTACACCACAGAG...GTGGCAACCAGCTGGAAATCTTGGCAAAGGATTGGTGTAAATGCCATGAAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp TTCTCAGTCAGACCCCGGAGGACAGAAGGCTTCTGTGCCTCAACTCCCTGCCTGTATAGGGAACGTGGATaGTGCCAAACAAGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: FSVRPRRTEGFCASTPCLYRERG*CQTSRL
Trigger: CAGCCTACTTGTTTGGCACCATCCACGTTCCCTATA...CAGGCAGGGAGTTGAGGCACAGAAGCCTTCTGTCCTCCGGGGTCTGACTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp TGGCCCCAGGAAACTCTCCCTATGGTCCATGAAGAAACAGAAGCTGAAAGAGCTTGGGGTTGCTGGAGCTaGGCTGGCAGGAGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: WPQETLPMVHEETEAERAWGCWS*AGRRGD
Trigger: ATCACCTCTCCTGCCAGCCCAGCTCCAGCAACCCCA...AGCTCTTTCAGCTTCTGTTTCTTCATGGACCATAGGGAGAGTTTCCTGGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp TGGCCCCAGGAAACTCTCCCTATGGTCCATGAAGAAACAGAAGCTGAAAGAGCTGGGGAGCAAGAGGTGTaGGGACAGGACTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: WPQETLPMVHEETEAERAGEQEV*GQDWVF
Trigger: GAAGACCCAGTCCTGTCCCCACACCTCTTGCTCCCC...AGCTCTTTCAGCTTCTGTTTCTTCATGGACCATAGGGAGAGTTTCCTGGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 72 bp GGGAAAGTAGCCCAGGATAGCTCCACTTATCCCATGTaGATGGTGAACTCTTCTGGGCCCAGAAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GKVAQDSSTYPM*MVNSSGPRRVG
Trigger: ACCCACCCTTCTGGGCCCAGAAGAGTTCACCATCAACATGGGATAAGTGGAGCTATCCTGGGCTACTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR GCA 90 bp CTTCATTTCTCCTTAAATTGCCCTTCTGGGGCCTGGACAGGGTTAGGGAGGATGTTGTCCTGGTTTTCCTaGAGCAGCGCCATGACCCTC +
Preference number: 4 (lower is better)
Translates to: LHFSLNCPSGAWTGLGRMLSWFS*SSAMTL
Trigger: GAGGGTCATGGCGCTGCTGCAGGAAAACCAGGACAA...CATCCTCCCTAACCCTGTCCAGGCCCCAGAAGGGCAATTTAAGGAGAAATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp AACAGACACAGGACCCACCTCATTGATTTGCTTGTATTTCCAACAGGGAGCAAATGCCCAGCAGGTGTGTaGTCCACCTCCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: NRHRTHLIDLLVFPTGSKCPAGV*STSSPA
Trigger: GGCAGGGCTGGAGGTGGACCACACACCTGCTGGGCA...TTTGCTCCCTGTTGGAAATACAAGCAAATCAATGAGGTGGGTCCTGTGTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 72 bp CATTTACACCAATCCTTTGCCAAGATTTCCAGCTGGTaGCCACATCTTCAGCCAGTGGACCCTGGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: HLHQSFAKISSW*PHLQPVDPGAL
Trigger: CAAGGCCCCAGGGTCCACTGGCTGAAGATGTGGCAACCAGCTGGAAATCTTGGCAAAGGATTGGTGTAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR TCA 90 bp TTCTCAGTCAGACCCCGGAGGACAGAAGGCTTCTGTGCCTCAACTCCCTGCCTGAACTGCCTTGGCCGCTaGTGTTTATTTAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: FSVRPRRTEGFCASTPCLNCLGR*CLFSLF
Trigger: AAAGAGACTAAATAAACATCAGCGGCCAAGGCAGTT...CAGGCAGGGAGTTGAGGCACAGAAGCCTTCTGTCCTCCGGGGTCTGACTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR GCA 90 bp CACTTTCATGGCATTTACACCAATCCTTTGCCAAGATTTCCAGCTGGTTGCCACCCCACACGGGCCTCTTaGGCTCCCAGTTACCAGCAA +
Preference number: 4 (lower is better)
Translates to: HFHGIYTNPLPRFPAGCHPTRAS*APSYQQ
Trigger: TTGCTGGTAACTGGGAGCGCAAGAGGCCCGTGTGGG...GTGGCAACCAGCTGGAAATCTTGGCAAAGGATTGGTGTAAATGCCATGAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR GCA 90 bp CTTCATTTCTCCTTAAATTGCCCTTCTGGGGCCTGGACAGGGTTAGGGAGGATGCCCCAGAAAGTGACCTaGTCCGAAGGCAAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LHFSLNCPSGAWTGLGRMPQKVT*SEGKEA
Trigger: TGCTTCTTTGCCTTCGGAGCAGGTCACTTTCTGGGG...CATCCTCCCTAACCCTGTCCAGGCCCCAGAAGGGCAATTTAAGGAGAAATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp TGGCCCCAGGAAACTCTCCCTATGGTCCATGAAGAAACAGAAGCTGAAAGAGCTAGTAGACGTGAGTGCTaGCCTGGAAGGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: WPQETLPMVHEETEAERASRREC*PGRLLW
Trigger: CCAAAGCAGCCTTCCAGGCCAGCACTCACGTCTACT...AGCTCTTTCAGCTTCTGTTTCTTCATGGACCATAGGGAGAGTTTCCTGGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp GGGATGTGGAAGTTGTCTCAAATAGAAAGCCAAGGCTGTCTTTTGCCTTTCCTACTTGCCGCGCTGTGCTaGCGTCATCCAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: GMWKLSQIESQGCLLPFLLAALC*RHPGGD
Trigger: ATCCCCTCCTGGATGACGCCAGCACAGCGCGGCAAG...TAGGAAAGGCAAAAGACAGCCTTGGCTTTCTATTTGAGACAACTTCCACATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp CTTGATCTCCATACATCTCATGCCATACTCTGCCCCAAACAGGGGAATCTGGCCTGCTGCAGCAGAGTCTaGTTCAGGGCAAACAACACC +
Preference number: 4 (lower is better)
Translates to: LDLHTSHAILCPKQGNLACCSRV*FRANNT
Trigger: GGTGTTGTTTGCCCTGAACCAGACTCTGCTGCAGCA...GGCCAGATTCCCCTGTTTGGGGCAGAGTATGGCATGAGATGTATGGAGATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR GCA 90 bp GAGAGCTTCCCCTGGGGAGTAACATGTATAAAGCACCATGTCTATTCTAGAAATGGACCGTGGATGGCTTaGCCAGCAGGTGTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: ESFPWGVTCIKHHVYSRNGPWMA*PAGVWS
Trigger: GGACCACACACCTGCTGGGCAAGCCATCCACGGTCC...ATTTCTAGAATAGACATGGTGCTTTATACATGTTACTCCCCAGGGGAAGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp GGGATGTGGAAGTTGTCTCAAATAGAAAGCCAAGGCTGTCTTTTGCCTTTCCTAGAGGCAGTGATGGCATaGAGGAGGCCCAGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: GMWKLSQIESQGCLLPFLEAVMA*RRPSVG
Trigger: GCCTACACTGGGCCTCCTCCATGCCATCACTGCCTC...TAGGAAAGGCAAAAGACAGCCTTGGCTTTCTATTTGAGACAACTTCCACATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 72 bp TCACTTCCCAGCCCTAACCAGGTTTACCAGCCCCTCTaGAATGGAAGCTGGATCAGTGACACTGGAACATCA +
Preference number: 4 (lower is better)
Translates to: SLPSPNQVYQPL*NGSWISDTGTS
Trigger: TGATGTTCCAGTGTCACTGATCCAGCTTCCATTCAAGAGGGGCTGGTAAACCTGGTTAGGGCTGGGAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 72 bp ATTGAATTGGAGGTCATCACATCGCACAGCAGGCTTTaGGCAGGTGGTTGTCTCTACCACGGTCATCACCAC +
Preference number: 4 (lower is better)
Translates to: IELEVITSHSRL*AGGCLYHGHHH
Trigger: GTGGTGATGACCGTGGTAGAGACAACCACCTGCCAAAAGCCTGCTGTGCGATGTGATGACCTCCAATTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp GAGAGCTTCCCCTGGGGAGTAACATGTATAAAGCACCATGTCTATTCTAGAAATTGCAGGTTCTCCCCATaGGGCAGCAGCTGGCAACTG +
Preference number: 4 (lower is better)
Translates to: ESFPWGVTCIKHHVYSRNCRFSP*GSSWQL
Trigger: CAGTTGCCAGCTGCTGCCCCATGGGGAGAACCTGCA...ATTTCTAGAATAGACATGGTGCTTTATACATGTTACTCCCCAGGGGAAGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 72 bp AGCCAGGGGCACTTTCATGGCATTTACACCAATCCTTaGCCAAGATTTCCAGCTGGTTGCCACATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SQGHFHGIYTNP*PRFPAGCHIFS
Trigger: GCTGAAGATGTGGCAACCAGCTGGAAATCTTGGCAAAGGATTGGTGTAAATGCCATGAAAGTGCCCCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR TCA 90 bp CTTCATTTCTCCTTAAATTGCCCTTCTGGGGCCTGGACAGGGTTAGGGAGGATGTACCAGCAATGGCATTaGACAGGTAGTCAGCATACA +
Preference number: 4 (lower is better)
Translates to: LHFSLNCPSGAWTGLGRMYQQWH*TGSQHT
Trigger: TGTATGCTGACTACCTGTTCAATGCCATTGCTGGTA...CATCCTCCCTAACCCTGTCCAGGCCCCAGAAGGGCAATTTAAGGAGAAATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR TCA 90 bp GAGAGCTTCCCCTGGGGAGTAACATGTATAAAGCACCATGTCTATTCTAGAAATGGACCCAGAGGTCATTaGACTGCCTTGGCCGCTGAT +
Preference number: 4 (lower is better)
Translates to: ESFPWGVTCIKHHVYSRNGPRGH*TALAAD
Trigger: ATCAGCGGCCAAGGCAGTTCAATGACCTCTGGGTCC...ATTTCTAGAATAGACATGGTGCTTTATACATGTTACTCCCCAGGGGAAGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp TGTGCTTGGGTCTTTCAGTATAAGGTGAACGTTGTGAGTCACCCTCAGTCCAGAAGGGCAAACAACACCTaGGAGAAGTTGAGCCCATTG +
Preference number: 4 (lower is better)
Translates to: CAWVFQYKVNVVSHPQSRRANNT*EKLSPL
Trigger: CAATGGGCTCAACTTCTCCCAGGTGTTGTTTGCCCT...TCTGGACTGAGGGTGACTCACAACGTTCACCTTATACTGAAAGACCCAAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 72 bp AGGAGTAGAACACAGTTTGAGGAGCAAGGGTATTTTTaGTATCACCCTAATCCAGGGCTGGGCAGGGCATAC +
Preference number: 4 (lower is better)
Translates to: RSRTQFEEQGYF*YHPNPGLGRAY
Trigger: GTATGCCCTGCCCAGCCCTGGATTAGGGTGATACAAAAAATACCCTTGCTCCTCAAACTGTGTTCTACTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 72 bp TCCTCTTTCTGGACCTTAGCGTCATTCTTACTCTTGTaGCCAGGTGAGGGCTCTTTTCTGCTCTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: SSFWTLASFLLL*PGEGSFLLSGS
Trigger: AGATCCTGAGAGCAGAAAAGAGCCCTCACCTGGCAACAAGAGTAAGAATGACGCTAAGGTCCAGAAAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp AAGAGTCCTTGGTTTCTCACTCCAGGCATCTTAGACTTGGATCCTATTAAAAATCCGAACTCCTCTAGCTaGCTTAGGCTGTCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: KSPWFLTPGILDLDPIKNPNSSS*LRLSGS
Trigger: GCTCCCCGACAGCCTAAGCCAGCTAGAGGAGTTCGG...ATTTTTAATAGGATCCAAGTCTAAGATGCCTGGAGTGAGAAACCAAGGACTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR GCA 90 bp AAGAGTCCTTGGTTTCTCACTCCAGGCATCTTAGACTTGGATCCTATTAAAAATGCCCGCACACTTTCGTaGTGCAGCAGAGTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: KSPWFLTPGILDLDPIKNARTLS*CSRVWF
Trigger: GAACCAGACTCTGCTGCAGCACGAAAGTGTGCGGGC...ATTTTTAATAGGATCCAAGTCTAAGATGCCTGGAGTGAGAAACCAAGGACTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp AAGAGTCCTTGGTTTCTCACTCCAGGCATCTTAGACTTGGATCCTATTAAAAATGCAGCAGCTGGCAACTaGCCAGGGCTGAGATGGTAT +
Preference number: 4 (lower is better)
Translates to: KSPWFLTPGILDLDPIKNAAAGN*PGLRWY
Trigger: ATACCATCTCAGCCCTGGCCAGTTGCCAGCTGCTGC...ATTTTTAATAGGATCCAAGTCTAAGATGCCTGGAGTGAGAAACCAAGGACTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp GAGAGCTTCCCCTGGGGAGTAACATGTATAAAGCACCATGTCTATTCTAGAAATCACCTGCTCATGAGGTaGGAGGGTGGTGTTGATGAA +
Preference number: 4 (lower is better)
Translates to: ESFPWGVTCIKHHVYSRNHLLMR*EGGVDE
Trigger: TTCATCAACACCACCCTCCCACCTCATGAGCAGGTG...ATTTCTAGAATAGACATGGTGCTTTATACATGTTACTCCCCAGGGGAAGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp GAGAGCTTCCCCTGGGGAGTAACATGTATAAAGCACCATGTCTATTCTAGAAATAAGCAGATCTTGTCCTaGTTTTCCTGCAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: ESFPWGVTCIKHHVYSRNKQILS*FSCSSA
Trigger: GGCGCTGCTGCAGGAAAACCAGGACAAGATCTGCTT...ATTTCTAGAATAGACATGGTGCTTTATACATGTTACTCCCCAGGGGAAGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 72 bp TGGAAGTTGTCTCAAATAGAAAGCCAAGGCTGTCTTTaGCCTTTCCTAGCTCCAACCTCTTCTTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: WKLSQIESQGCL*PFLAPTSSSSV
Trigger: GACAGAGGAAGAAGAGGTTGGAGCTAGGAAAGGCAAAAGACAGCCTTGGCTTTCTATTTGAGACAACTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR GCA 90 bp TTTGGAAAACTAACAATGTGTAAAGAACCCAAACCTTACAAAGCCAGGGGCACTGCTGGCCTGGAAGGCTaGTTTGGAATTATCAGGGAT +
Preference number: 4 (lower is better)
Translates to: FGKLTMCKEPKPYKARGTAGLEG*FGIIRD
Trigger: ATCCCTGATAATTCCAAAGCAGCCTTCCAGGCCAGC...AGTGCCCCTGGCTTTGTAAGGTTTGGGTTCTTTACACATTGTTAGTTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CCA 90 bp GGGATGTGGAAGTTGTCTCAAATAGAAAGCCAAGGCTGTCTTTTGCCTTTCCTAAGCTGGGATGTGTCATaGTTGAAGATGACAGCATTG +
Preference number: 4 (lower is better)
Translates to: GMWKLSQIESQGCLLPFLSWDVS*LKMTAL
Trigger: CAATGCTGTCATCTTCAACCATGACACATCCCAGCT...TAGGAAAGGCAAAAGACAGCCTTGGCTTTCTATTTGAGACAACTTCCACATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 72 bp AAGAGTCCTTGGTTTCTCACTCCAGGCATCTTAGACTaGGATCCTATTAAAAATCACATTCCCCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KSPWFLTPGILD*DPIKNHIPQGR
Trigger: CCTGCCTTGGGGAATGTGATTTTTAATAGGATCCAAGTCTAAGATGCCTGGAGTGAGAAACCAAGGACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 72 bp TTTCTTTCTTTCTTTCTTTCTTCATTTCTCCTTAAATaGCCCTTCTGGGGCCTGGACAGGGTTAGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: FLSFFLSSFLLK*PFWGLDRVRED
Trigger: ATCCTCCCTAACCCTGTCCAGGCCCCAGAAGGGCAATTTAAGGAGAAATGAAGAAAGAAAGAAAGAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
3UTR CAA 72 bp GAACAATGGTTCTTTCTTTCTAAGTCCACACCTACCTaGAATTTTGTTGATCTGTTGGACTACTCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: EQWFFLSKSTPT*NFVDLLDYSAL
Trigger: GAGGGCAGAGTAGTCCAACAGATCAACAAAATTCAAGGTAGGTGTGGACTTAGAAAGAAAGAACCATTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS CCA 90 bp TGCTGGAGCTGGGCTGGCAGGAGAGGTGATCTCAGGAGGGGGAGCTaGGCTTCCAACAGCAGCAGGACCGTGGATGGCTTGCCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: CWSWAGRRGDLRRGS*ASNSSRTVDGLPSR
Trigger: CCTGCTGGGCAAGCCATCCACGGTCCTGCTGCTGTTGGAAGCCCAGCTCCCCCTCCTGAGATCACCTCTCCTGCCAGCCCAGCTCCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CAA 90 bp TTCTCAGTCAGACCCCGGAGGACAGAAGGCTTCTGTGCCTCAACTCCCTGCCTGTGGGGGTCGCTGAGGTaGCTTCTGGGACTGCAGCGG +
Preference number: 5 (lower is better)
Translates to: FSVRPRRTEGFCASTPCLWGSLR*LLGLQR
Trigger: CCGCTGCAGTCCCAGAAGCAACCTCAGCGACCCCCA...CAGGCAGGGAGTTGAGGCACAGAAGCCTTCTGTCCTCCGGGGTCTGACTGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS GCA 90 bp GAGGACTTGACAAAGGGCTTGGTGGTTTCGGAGCTGGGGGTAGGCTaGAGGGGCAGCGGAGGTGGCGAGATCGTAGTGCTGTCCTCGATT +
Preference number: 5 (lower is better)
Translates to: EDLTKGLVVSELGVG*RGSGGGEIVVLSSI
Trigger: AATCGAGGACAGCACTACGATCTCGCCACCTCCGCTGCCCCTGCAGCCTACCCCCAGCTCCGAAACCACCAAGCCCTTTGTCAAGTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS GCA 90 bp CCCAGTGTAGGCGCTGAGCTGCTGGTAGGCCCCACAGCGTCCTGCTaGTGGAGTTGGTGTGAGGACTTGACAAAGGGCTTGGTGGTTTCG +
Preference number: 5 (lower is better)
Translates to: PSVGAELLVGPTASC*WSWCEDLTKGLVVS
Trigger: CGAAACCACCAAGCCCTTTGTCAAGTCCTCACACCAACTCCAGCAGCAGGACGCTGTGGGGCCTACCAGCAGCTCAGCGCCTACACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS GCA 90 bp AGGCCCAGTGTAGGCGCTGAGCTGCTGGTAGGCCCCACAGCGTCCTaGTGCTGGAGTTGGTGTGAGGACTTGACAAAGGGCTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: RPSVGAELLVGPTAS*CWSWCEDLTKGLVV
Trigger: AACCACCAAGCCCTTTGTCAAGTCCTCACACCAACTCCAGCAGCAGGACGCTGTGGGGCCTACCAGCAGCTCAGCGCCTACACTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS CCA 90 bp CTTCCAACAGCAGCAGGACCGTGGATGGCTTGCCCAGCAGGTGTGTaGTCCACCTCCAGCCCTGCCTGTCTTAGGACATCGATGACAGTG +
Preference number: 5 (lower is better)
Translates to: LPTAAGPWMACPAGV*STSSPACLRTSMTV
Trigger: CACTGTCATCGATGTCCTAAGACAGGCAGGGCTGGAGGTGGACCACACACCTGCTGGGCAAGCCATCCACGGTCCTGCTGCTGTTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CAA 90 bp TGCTGTATTAATTCACCATCTTGGCCCCACGCCTGGCACAGGTCTGGGCACACGGACTTGACAAAGGGCTaGGTGGTTTCGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: CCINSPSWPHAWHRSGHTDLTKG*VVSELG
Trigger: CCCCAGCTCCGAAACCACCAAGCCCTTTGTCAAGTC...CGTGTGCCCAGACCTGTGCCAGGCGTGGGGCCAAGATGGTGAATTAATACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS CCA 90 bp CCAGACTCGGGTATAGGGAACGTGGATGGTGCCAAACAAGTAGGCTaGAGGATGGCGCCGAATAGTCCACAGGAAGGAGTTCAGGTCCCT +
Preference number: 5 (lower is better)
Translates to: PDSGIGNVDGAKQVG*RMAPNSPQEGVQVP
Trigger: AGGGACCTGAACTCCTTCCTGTGGACTATTCGGCGCCATCCTCCAGCCTACTTGTTTGGCACCATCCACGTTCCCTATACCCGAGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CAA 90 bp CTTGATCTCCATACATCTCATGCCATACTCTGCCCCAAACAGGGGAATCTGGCCAGGACCGTGGATGGCTaGCCCAGCAGGTGTGTGGTC +
Preference number: 5 (lower is better)
Translates to: LDLHTSHAILCPKQGNLARTVDG*PSRCVV
Trigger: GACCACACACCTGCTGGGCAAGCCATCCACGGTCCT...GGCCAGATTCCCCTGTTTGGGGCAGAGTATGGCATGAGATGTATGGAGATCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS TCA 90 bp CAGGTGTGTGGTCCACCTCCAGCCCTGCCTGTCTTAGGACATCGATaGCAGTGTTGTTCCCCAGAAAGTGACCTGCTCCGAAGGCAAAGA +
Preference number: 5 (lower is better)
Translates to: QVCGPPPALPVLGHR*QCCSPESDLLRRQR
Trigger: TCTTTGCCTTCGGAGCAGGTCACTTTCTGGGGAACAACACTGTCATCGATGTCCTAAGACAGGCAGGGCTGGAGGTGGACCACACACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS GCA 90 bp GCAAACAACACCTGGGAGAAGTTGAGCCCATTGAGAGGATGGCACTaGTCCTCAACCCGCTCCACAGCCCCTGTGCTCTTCTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: ANNTWEKLSPLRGWH*SSTRSTAPVLFFIF
Trigger: GAAGATGAAGAAGAGCACAGGGGCTGTGGAGCGGGTTGAGGAGCAGTGCCATCCTCTCAATGGGCTCAACTTCTCCCAGGTGTTGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS CCA 90 bp TTATTTAGTCTCTTTCGCCACTTCTGCCTTCCGAACTCCTCTAGCTaGCTTAGGCTGTCGGGGAGCAAGAGGTGTGGGGACAGGACTGGG +
Preference number: 5 (lower is better)
Translates to: LFSLFRHFCLPNSSS*LRLSGSKRCGDRTG
Trigger: CCCAGTCCTGTCCCCACACCTCTTGCTCCCCGACAGCCTAAGCCAGCTAGAGGAGTTCGGAAGGCAGAAGTGGCGAAAGAGACTAAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS TCA 90 bp AGACGTGAGTGCTGGCCTGGAAGGCTGCTTTGGAATTATCAGGGATaGAGTCCCAGACTCGGGTATAGGGAACGTGGATGGTGCCAAACA +
Preference number: 5 (lower is better)
Translates to: RRECWPGRLLWNYQG*SPRLGYRERGWCQT
Trigger: TGTTTGGCACCATCCACGTTCCCTATACCCGAGTCTGGGACTTCATCCCTGATAATTCCAAAGCAGCCTTCCAGGCCAGCACTCACGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS TCA 90 bp CTGTCCTCGATTCGGACCCAGAGGTCATTGAACTGCCTTGGCCGCTaGTGTTTATTTAGTCTCTTTCGCCACTTCTGCCTTCCGAACTCC +
Preference number: 5 (lower is better)
Translates to: LSSIRTQRSLNCLGR*CLFSLFRHFCLPNS
Trigger: GGAGTTCGGAAGGCAGAAGTGGCGAAAGAGACTAAATAAACATCAGCGGCCAAGGCAGTTCAATGACCTCTGGGTCCGAATCGAGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CAA 90 bp GAGAGCTTCCCCTGGGGAGTAACATGTATAAAGCACCATGTCTATTCTAGAAATGCCAGTAGAGCTCCCTaGGCAGCACGTCCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: ESFPWGVTCIKHHVYSRNASRAP*AARPAG
Trigger: ACCTGCAGGACGTGCTGCCAAGGGAGCTCTACTGGC...ATTTCTAGAATAGACATGGTGCTTTATACATGTTACTCCCCAGGGGAAGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CAA 90 bp TGGCCCCAGGAAACTCTCCCTATGGTCCATGAAGAAACAGAAGCTGAAAGAGCTAACACCTGGGAGAAGTaGAGCCCATTGAGAGGATGG +
Preference number: 5 (lower is better)
Translates to: WPQETLPMVHEETEAERANTWEK*SPLRGW
Trigger: CCATCCTCTCAATGGGCTCAACTTCTCCCAGGTGTT...AGCTCTTTCAGCTTCTGTTTCTTCATGGACCATAGGGAGAGTTTCCTGGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CAA 90 bp CACTTTCATGGCATTTACACCAATCCTTTGCCAAGATTTCCAGCTGGTTGCCACGGTGGGAGGGTGGTGTaGATGAAGTTGGGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: HFHGIYTNPLPRFPAGCHGGRVV*MKLGSW
Trigger: CCAGCTACCCAACTTCATCAACACCACCCTCCCACC...GTGGCAACCAGCTGGAAATCTTGGCAAAGGATTGGTGTAAATGCCATGAAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CAA 90 bp TGGCCCCAGGAAACTCTCCCTATGGTCCATGAAGAAACAGAAGCTGAAAGAGCTGTGGTGTTGATGAAGTaGGGTAGCTGGGATGTGTCA +
Preference number: 5 (lower is better)
Translates to: WPQETLPMVHEETEAERAVVLMK*GSWDVS
Trigger: TGACACATCCCAGCTACCCAACTTCATCAACACCAC...AGCTCTTTCAGCTTCTGTTTCTTCATGGACCATAGGGAGAGTTTCCTGGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS-3UTR CAA 90 bp AACAGACACAGGACCCACCTCATTGATTTGCTTGTATTTCCAACAGGGAGCAAATGGGATGTGTCATGGTaGAAGATGACAGCATTGAGG +
Preference number: 5 (lower is better)
Translates to: NRHRTHLIDLLVFPTGSKWDVSW*KMTALR
Trigger: CCTCAATGCTGTCATCTTCAACCATGACACATCCCA...TTTGCTCCCTGTTGGAAATACAAGCAAATCAATGAGGTGGGTCCTGTGTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS TCA 72 bp GGCAGTGATGGCATGGAGGAGGCCCAGTGTAGGCGCTaGGCTGCTGGTAGGCCCCACAGCGTCCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GSDGMEEAQCRR*AAGRPHSVLLL
Trigger: CAGCAGCAGGACGCTGTGGGGCCTACCAGCAGCTCAGCGCCTACACTGGGCCTCCTCCATGCCATCACTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS CCA 72 bp GGGGAGCTGGGCTTCCAACAGCAGCAGGACCGTGGATaGCTTGCCCAGCAGGTGTGTGGTCCACCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: GELGFQQQQDRG*LAQQVCGPPPA
Trigger: GGCTGGAGGTGGACCACACACCTGCTGGGCAAGCCATCCACGGTCCTGCTGCTGTTGGAAGCCCAGCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS CAA 72 bp AGCTGGGCTTCCAACAGCAGCAGGACCGTGGATGGCTaGCCCAGCAGGTGTGTGGTCCACCTCCAGCCCTGC +
Preference number: 6 (lower is better)
Translates to: SWASNSSRTVDG*PSRCVVHLQPC
Trigger: GCAGGGCTGGAGGTGGACCACACACCTGCTGGGCAAGCCATCCACGGTCCTGCTGCTGTTGGAAGCCCAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS GCA 72 bp ACAAAGGGCTTGGTGGTTTCGGAGCTGGGGGTAGGCTaGAGGGGCAGCGGAGGTGGCGAGATCGTAGTGCTG +
Preference number: 6 (lower is better)
Translates to: TKGLVVSELGVG*RGSGGGEIVVL
Trigger: CAGCACTACGATCTCGCCACCTCCGCTGCCCCTGCAGCCTACCCCCAGCTCCGAAACCACCAAGCCCTTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS CCA 72 bp GCAGCAGGACCGTGGATGGCTTGCCCAGCAGGTGTGTaGTCCACCTCCAGCCCTGCCTGTCTTAGGACATCG +
Preference number: 6 (lower is better)
Translates to: AAGPWMACPAGV*STSSPACLRTS
Trigger: CGATGTCCTAAGACAGGCAGGGCTGGAGGTGGACCACACACCTGCTGGGCAAGCCATCCACGGTCCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS CAA 90 bp CTGGTAGGCCCCACAGCGTCCTGCTGCTGGAGTTGGTGTGAGGACTaGACAAAGGGCTTGGTGGTTTCGGAGCTGGGGGTAGGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: LVGPTASCCWSWCED*TKGLVVSELGVGCR
Trigger: CCTGCAGCCTACCCCCAGCTCCGAAACCACCAAGCCCTTTGTCAAGTCCTCACACCAACTCCAGCAGCAGGACGCTGTGGGGCCTACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS GCA 72 bp GGTGCCTGCAGGCTCCCAGCCCGCACACTTTCGTGCTaGAGCAGAGTCTGGTTCAGGGCAAACAACACCTGG +
Preference number: 6 (lower is better)
Translates to: GACRLPARTLSC*SRVWFRANNTW
Trigger: CCAGGTGTTGTTTGCCCTGAACCAGACTCTGCTGCAGCACGAAAGTGTGCGGGCTGGGAGCCTGCAGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS GCA 72 bp GGCGCTGAGCTGCTGGTAGGCCCCACAGCGTCCTGCTaGTGGAGTTGGTGTGAGGACTTGACAAAGGGCTTG +
Preference number: 6 (lower is better)
Translates to: GAELLVGPTASC*WSWCEDLTKGL
Trigger: CAAGCCCTTTGTCAAGTCCTCACACCAACTCCAGCAGCAGGACGCTGTGGGGCCTACCAGCAGCTCAGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS GCA 72 bp GTAGGCGCTGAGCTGCTGGTAGGCCCCACAGCGTCCTaGTGCTGGAGTTGGTGTGAGGACTTGACAAAGGGC +
Preference number: 6 (lower is better)
Translates to: VGAELLVGPTAS*CWSWCEDLTKG
Trigger: GCCCTTTGTCAAGTCCTCACACCAACTCCAGCAGCAGGACGCTGTGGGGCCTACCAGCAGCTCAGCGCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS TCA 72 bp GGTAGGCCCCACAGCGTCCTGCTGCTGGAGTTGGTGTaGGGACTTGACAAAGGGCTTGGTGGTTTCGGAGCT +
Preference number: 6 (lower is better)
Translates to: GRPHSVLLLELV*GLDKGLGGFGA
Trigger: AGCTCCGAAACCACCAAGCCCTTTGTCAAGTCCTCACACCAACTCCAGCAGCAGGACGCTGTGGGGCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS CCA 72 bp CTCTTTCGCCACTTCTGCCTTCCGAACTCCTCTAGCTaGCTTAGGCTGTCGGGGAGCAAGAGGTGTGGGGAC +
Preference number: 6 (lower is better)
Translates to: LFRHFCLPNSSS*LRLSGSKRCGD
Trigger: GTCCCCACACCTCTTGCTCCCCGACAGCCTAAGCCAGCTAGAGGAGTTCGGAAGGCAGAAGTGGCGAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS CAA 72 bp CCCACAGCGTCCTGCTGCTGGAGTTGGTGTGAGGACTaGACAAAGGGCTTGGTGGTTTCGGAGCTGGGGGTA +
Preference number: 6 (lower is better)
Translates to: PTASCCWSWCED*TKGLVVSELGV
Trigger: TACCCCCAGCTCCGAAACCACCAAGCCCTTTGTCAAGTCCTCACACCAACTCCAGCAGCAGGACGCTGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS TCA 72 bp GGTCCACCTCCAGCCCTGCCTGTCTTAGGACATCGATaGCAGTGTTGTTCCCCAGAAAGTGACCTGCTCCGA +
Preference number: 6 (lower is better)
Translates to: GPPPALPVLGHR*QCCSPESDLLR
Trigger: TCGGAGCAGGTCACTTTCTGGGGAACAACACTGTCATCGATGTCCTAAGACAGGCAGGGCTGGAGGTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS TCA 72 bp TGCTGGCCTGGAAGGCTGCTTTGGAATTATCAGGGATaGAGTCCCAGACTCGGGTATAGGGAACGTGGATGG +
Preference number: 6 (lower is better)
Translates to: CWPGRLLWNYQG*SPRLGYRERGW
Trigger: CCATCCACGTTCCCTATACCCGAGTCTGGGACTTCATCCCTGATAATTCCAAAGCAGCCTTCCAGGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4
CDS CCA 72 bp GGTATAGGGAACGTGGATGGTGCCAAACAAGTAGGCTaGAGGATGGCGCCGAATAGTCCACAGGAAGGAGTT +
Preference number: 6 (lower is better)
Translates to: GIGNVDGAKQVG*RMAPNSPQEGV
Trigger: AACTCCTTCCTGTGGACTATTCGGCGCCATCCTCCAGCCTACTTGTTTGGCACCATCCACGTTCCCTATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094894.4