Pregenerated sensors for TRABD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015363Ensembl transcript IDs: ENSMUST00000081702.12, ENSMUST00000165690.2, ENSMUST00000168863.8, ENSMUST00000169870.8, ENSMUST00000169891.8
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCCATGCCAACGACGCCCACAACCACAGACGGGACACACTTCCTaGGCTCAGCATCAGAGGCGCGGGGAAGCTCAAGGCGCCGTGCGG | + |
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Preference number: 1 (lower is better) Translates to: APCQRRPQPQTGHTS*AQHQRRGEAQGAVR Trigger: CCGCACGGCGCCTTGAGCTTCCCCGCGCCTCTGATGCTGAGCCCAGGAAGTGTGTCCCGTCTGTGGTTGTGGGCGTCGTTGGCATGGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR CCA 90 bp | AGGCCGCTGGGTCCTGACACTGCGGTTGGCCCTGATGCCCATAGGTaGCCCCACAGTGTGTGTGTGGGCTGCTGGGAAGCCTGGGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: RPLGPDTAVGPDAHR*PHSVCVGCWEAWAQ Trigger: CTGAGCCCAGGCTTCCCAGCAGCCCACACACACACTGTGGGGCCACCTATGGGCATCAGGGCCAACCGCAGTGTCAGGACCCAGCGGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR CCA 90 bp | CTTGCACGGTCCTCCTACCGGCCTGGCCGGGCTTCGCTCACCCTCTaGAGGCAGAACTGTGCAGCAGGCAGTGACAGGACCAGGTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: LARSSYRPGRASLTL*RQNCAAGSDRTRFR Trigger: CCTGAACCTGGTCCTGTCACTGCCTGCTGCACAGTTCTGCCTCCAGAGGGTGAGCGAAGCCCGGCCAGGCCGGTAGGAGGACCGTGCAAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169870.8 ENSMUST00000169891.8 |
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| 3UTR TCA 90 bp | CCGGGCTTCGCTCACCCTCTGGAGGCAGAACTGTGCAGCAGGCAGTaGCAGGACCAGGTTCAGGGTCCGACGGCCCATCCAGTACAGGCT | + |
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Preference number: 1 (lower is better) Translates to: PGFAHPLEAELCSRQ*QDQVQGPTAHPVQA Trigger: AGCCTGTACTGGATGGGCCGTCGGACCCTGAACCTGGTCCTGTCACTGCCTGCTGCACAGTTCTGCCTCCAGAGGGTGAGCGAAGCCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169870.8 ENSMUST00000169891.8 |
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| 3UTR TCA 90 bp | ACACCCAGGAGGGAGGTGCATGGCCACTCAGCCCCAAACCCACAGTaGGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCACAAG | + |
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Preference number: 1 (lower is better) Translates to: TPRREVHGHSAPNPQ*DALRPRCSCRPEHK Trigger: CTTGTGCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCACTGTGGGTTTGGGGCTGAGTGGCCATGCACCTCCCTCCTGGGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR CCA 90 bp | GCAGTGCCCACCACATACACCCTGCTCCCATCCTCGGCCACTAGCTaGGTCACTGTACGTGGAAGGTTGGGGCGTTCACGCCGTCGTTTC | + |
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Preference number: 1 (lower is better) Translates to: AVPTTYTLLPSSATS*VTVRGRLGRSRRRF Trigger: GAAACGACGGCGTGAACGCCCCAACCTTCCACGTACAGTGACCCAGCTAGTGGCCGAGGATGGGAGCAGGGTGTATGTGGTGGGCACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR TCA 90 bp | CGCAGCAGCGTCCTCTCGTCCATCTTGAGCATGGACACCCGGTACTaGCAGAGCTCCACCACGACCACATCCGGTTGCACCTCCCGGATA | + |
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Preference number: 1 (lower is better) Translates to: RSSVLSSILSMDTRY*QSSTTTTSGCTSRI Trigger: TATCCGGGAGGTGCAACCGGATGTGGTCGTGGTGGAGCTCTGTCAGTACCGGGTGTCCATGCTCAAGATGGACGAGAGGACGCTGCTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR GCA 90 bp | GCCGGCCAGAGCACAAGGCACAGTGAGGTAGGTAGAGCAACAGCTTaGCAAACCCACCTGGGGTTAAGGGTGGGGTGTCTCAGTGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: AGQSTRHSEVGRATA*QTHLGLRVGCLSAS Trigger: GGAGGCACTGAGACACCCCACCCTTAACCCCAGGTGGGTTTGGCAAGCTGTTGCTCTACCTACCTCACTGTGCCTTGTGCTCTGGCCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR CCA 90 bp | TGCTCCCATCCTCGGCCACTAGCTGGGTCACTGTACGTGGAAGGTTaGGGCGTTCACGCCGTCGTTTCAGTTTCATCTCCAGGAGCAAGT | + |
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Preference number: 1 (lower is better) Translates to: CSHPRPLAGSLYVEG*GVHAVVSVSSPGAS Trigger: ACTTGCTCCTGGAGATGAAACTGAAACGACGGCGTGAACGCCCCAACCTTCCACGTACAGTGACCCAGCTAGTGGCCGAGGATGGGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR TCA 90 bp | TCCCTGAACTCGCCACCAGGGGCCATGCCCAGCTGCTCAGTGATGTaGGCAGACACCTTCAGCAGCAACATCTGCATGAGTCCAGACATA | + |
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Preference number: 1 (lower is better) Translates to: SLNSPPGAMPSCSVM*ADTFSSNICMSPDI Trigger: TATGTCTGGACTCATGCAGATGTTGCTGCTGAAGGTGTCTGCTCACATCACTGAGCAGCTGGGCATGGCCCCTGGTGGCGAGTTCAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR TCA 90 bp | GTCCTTCTGTTTGCAGCGCTCCACGTCGTCTTTGCTGATTGGGTCTaGCAGGAAGCACAGGCCCCAGGCCAGCTTGACTTTCTGCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: VLLFAALHVVFADWV*QEAQAPGQLDFLPE Trigger: TTCTGGCAGAAAGTCAAGCTGGCCTGGGGCCTGTGCTTCCTGTCAGACCCAATCAGCAAAGACGACGTGGAGCGCTGCAAACAGAAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR TCA 90 bp | CCGTGCGGCCTGCCGCAGCATATAGGTCAGATAGACGTCACGCTCTaGGACAATGGTGCGATGCAGGTCAGGAAACTCCCCAATCATCTC | + |
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Preference number: 1 (lower is better) Translates to: PCGLPQHIGQIDVTL*DNGAMQVRKLPNHL Trigger: GAGATGATTGGGGAGTTTCCTGACCTGCATCGCACCATTGTCTCAGAGCGTGACGTCTATCTGACCTATATGCTGCGGCAGGCCGCACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR GCA 90 bp | TGGATGTTGAGGTCGGTACTCCAGTTCTTCTCAATGCCAGGCACATaGCCCATGCCAACGACGCCCACAACCACAGACGGGACACACTTC | + |
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Preference number: 1 (lower is better) Translates to: WMLRSVLQFFSMPGT*PMPTTPTTTDGTHF Trigger: GAAGTGTGTCCCGTCTGTGGTTGTGGGCGTCGTTGGCATGGGGCATGTGCCTGGCATTGAGAAGAACTGGAGTACCGACCTCAACATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR GCA 90 bp | GTGCGATGCAGGTCAGGAAACTCCCCAATCATCTCGGCCATCATCTaGTCCAACAGGTCCTTCTGTTTGCAGCGCTCCACGTCGTCTTTG | + |
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Preference number: 1 (lower is better) Translates to: VRCRSGNSPIISAII*SNRSFCLQRSTSSL Trigger: CAAAGACGACGTGGAGCGCTGCAAACAGAAGGACCTGTTGGAGCAGATGATGGCCGAGATGATTGGGGAGTTTCCTGACCTGCATCGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR CCA 90 bp | GCCCATAGGTGGCCCCACAGTGTGTGTGTGGGCTGCTGGGAAGCCTaGGCTCAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCAT | + |
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Preference number: 1 (lower is better) Translates to: AHRWPHSVCVGCWEA*AQTVKYSLFGWAGH Trigger: ATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTGAGCCCAGGCTTCCCAGCAGCCCACACACACACTGTGGGGCCACCTATGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR CCA 90 bp | GGCCCTGATGCCCATAGGTGGCCCCACAGTGTGTGTGTGGGCTGCTaGGAAGCCTGGGCTCAGACAGTTAAATATTCTTTATTTGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: GPDAHRWPHSVCVGC*EAWAQTVKYSLFGW Trigger: CCACCCAAATAAAGAATATTTAACTGTCTGAGCCCAGGCTTCCCAGCAGCCCACACACACACTGTGGGGCCACCTATGGGCATCAGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR GCA 90 bp | GTTGGCCCTGATGCCCATAGGTGGCCCCACAGTGTGTGTGTGGGCTaGTGGGAAGCCTGGGCTCAGACAGTTAAATATTCTTTATTTGGG | + |
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Preference number: 1 (lower is better) Translates to: VGPDAHRWPHSVCVG*WEAWAQTVKYSLFG Trigger: CCCAAATAAAGAATATTTAACTGTCTGAGCCCAGGCTTCCCAGCAGCCCACACACACACTGTGGGGCCACCTATGGGCATCAGGGCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR CCA 90 bp | GCAATGGCCCTCTTAAAGGTGACTGGGATTGGTCGGTCACCCAGGTaGAATTTGCAGAATGGTACCTTGCTGGCCTCTTTGAAGGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: AMALLKVTGIGRSPR*NLQNGTLLASLKAS Trigger: GGAGGCCTTCAAAGAGGCCAGCAAGGTACCATTCTGCAAATTCCACCTGGGTGACCGACCAATCCCAGTCACCTTTAAGAGGGCCATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR CCA 90 bp | CCAGAAGGAGAGTGCAGCAATGGCCCTCTTAAAGGTGACTGGGATTaGTCGGTCACCCAGGTGGAATTTGCAGAATGGTACCTTGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: PEGECSNGPLKGDWD*SVTQVEFAEWYLAG Trigger: GCCAGCAAGGTACCATTCTGCAAATTCCACCTGGGTGACCGACCAATCCCAGTCACCTTTAAGAGGGCCATTGCTGCACTCTCCTTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR CCA 90 bp | CCTGCCGCAGCATATAGGTCAGATAGACGTCACGCTCTGAGACAATaGTGCGATGCAGGTCAGGAAACTCCCCAATCATCTCGGCCATCA | + |
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Preference number: 1 (lower is better) Translates to: PAAAYRSDRRHALRQ*CDAGQETPQSSRPS Trigger: TGATGGCCGAGATGATTGGGGAGTTTCCTGACCTGCATCGCACCATTGTCTCAGAGCGTGACGTCTATCTGACCTATATGCTGCGGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR GCA 90 bp | GCCGCAGCATATAGGTCAGATAGACGTCACGCTCTGAGACAATGGTaGGATGCAGGTCAGGAAACTCCCCAATCATCTCGGCCATCATCT | + |
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Preference number: 1 (lower is better) Translates to: AAAYRSDRRHALRQW*DAGQETPQSSRPSS Trigger: AGATGATGGCCGAGATGATTGGGGAGTTTCCTGACCTGCATCGCACCATTGTCTCAGAGCGTGACGTCTATCTGACCTATATGCTGCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR CCA 90 bp | TCCGTGTCTCACCTGATTTGGCAGCCAACACAAGGACAATCAATGTaGTCTAGGTCTTGCCAGGCTGTGCCATATACTAGGAGCCACAGC | + |
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Preference number: 1 (lower is better) Translates to: SVSHLIWQPTQGQSM*SRSCQAVPYTRSHS Trigger: GCTGTGGCTCCTAGTATATGGCACAGCCTGGCAAGACCTAGACCACATTGATTGTCCTTGTGTTGGCTGCCAAATCAGGTGAGACACGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR GCA 90 bp | AGCCAACACAAGGACAATCAATGTGGTCTAGGTCTTGCCAGGCTGTaGCATATACTAGGAGCCACAGCCTGTACACATGAATGGCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: SQHKDNQCGLGLARL*HILGATACTHEWLA Trigger: AGCCAGCCATTCATGTGTACAGGCTGTGGCTCCTAGTATATGGCACAGCCTGGCAAGACCTAGACCACATTGATTGTCCTTGTGTTGGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR CCA 90 bp | TTTCTGCCAGAAGGAGAGTGCAGCAATGGCCCTCTTAAAGGTGACTaGGATTGGTCGGTCACCCAGGTGGAATTTGCAGAATGGTACCTT | + |
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Preference number: 1 (lower is better) Translates to: FLPEGECSNGPLKGD*DWSVTQVEFAEWYL Trigger: AAGGTACCATTCTGCAAATTCCACCTGGGTGACCGACCAATCCCAGTCACCTTTAAGAGGGCCATTGCTGCACTCTCCTTCTGGCAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCAGAACTGTGCAGCAGGCAGTGACAGGACCAGGTTCAGGGTCCGACGGCCCGGCGCCAGCTCCTCGTaGGCACCCCACTCGGCGCAG | + |
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Preference number: 2 (lower is better) Translates to: RQNCAAGSDRTRFRVRRPGASSS*APHSAQ Trigger: CTGCGCCGAGTGGGGTGCTCACGAGGAGCTGGCGCC...GGGCCGTCGGACCCTGAACCTGGTCCTGTCACTGCCTGCTGCACAGTTCTGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169870.8 ENSMUST00000169891.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCCCATAGGGGGTGGCCACCCGGGACACTCTaGCTGAGATGGACGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GWALGRQGKPGLGPHRGWPPGTL*LRWTVG Trigger: CCCCACCGTCCATCTCAGGCAGAGTGTCCCGGGTGG...CCACCCCCTATGGGGGCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000169870.8 ENSMUST00000169891.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCCTGATGCCCATAGGTGGCCCCACAGTGTGTGTGTGGGCTGCTGGGAAGCCGGCCCCCATAGGGGGTaGCTTGGATGCATCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: GPDAHRWPHSVCVGCWEAGPHRG*LGCICP Trigger: GGGACAGATGCATCCAAGCCACCCCCTATGGGGGCC...GGCTTCCCAGCAGCCCACACACACACTGTGGGGCCACCTATGGGCATCAGGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCAATGCCAGGCACATGCCCCATGCCAACGACGCCCACAACCACAGACGGGGCAGCTTCTCCAGGCTaGCCTCCTTGGCCTCTCGCA | + |
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Preference number: 2 (lower is better) Translates to: FSMPGTCPMPTTPTTTDGAASPG*PPWPLA Trigger: TGCGAGAGGCCAAGGAGGTCAGCCTGGAGAAGCTGC...CCCGTCTGTGGTTGTGGGCGTCGTTGGCATGGGGCATGTGCCTGGCATTGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR-3UTR GCA 90 bp | GTCGGTACTCCAGTTCTTCTCAATGCCAGGCACATGCCCCATGCCAACGACGCCCCACCCGGGACACTCTaGCTGAGATGGACGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: VGTPVLLNARHMPHANDAPPGTL*LRWTVG Trigger: CCCCACCGTCCATCTCAGGCAGAGTGTCCCGGGTGG...GGCGTCGTTGGCATGGGGCATGTGCCTGGCATTGAGAAGAACTGGAGTACCGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCACAAGGCACAGTGGGTGGGCTGGGCATTaGGAAGGCAGGGAAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SEMHSGPDAPAGQSTRHSGWAGH*EGRESL Trigger: CAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCC...ACTGTGCCTTGTGCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCACAAGGCACAGTGGTGTGTGTGGGCTGCTaGGAAGCCTGGGCTCAGACA | + |
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Preference number: 2 (lower is better) Translates to: VRCTQAQMLLPARAQGTVVCVGC*EAWAQT Trigger: TGTCTGAGCCCAGGCTTCCCAGCAGCCCACACACAC...CACTGTGCCTTGTGCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAAACCAGACTCTCTGCAGGCAGAGATGCAGCTGGCAATGCCACATGCATGTGGCGCCAGCTCCTCGTaGGCACCCCACTCGGCGCAG | + |
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Preference number: 2 (lower is better) Translates to: TKPDSLQAEMQLAMPHACGASSS*APHSAQ Trigger: CTGCGCCGAGTGGGGTGCTCACGAGGAGCTGGCGCC...ACATGCATGTGGCATTGCCAGCTGCATCTCTGCCTGCAGAGAGTCTGGTTTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCACAAGTGTGAGACAGAGTACACAGCCAGCCAGCCCTGTGTCCCCACCCAGGCCCCAAACCCACAGTaGGATGCACTCAGGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: VHKCETEYTASQPCVPTQAPNPQ*DALRPR Trigger: TCTGGGCCTGAGTGCATCTCACTGTGGGTTTGGGGC...CTGGGTGGGGACACAGGGCTGGCTGGCTGTGTACTCTGTCTCACACTTGTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAGGGAGGTGCATGGCCACTCAGCCCCAAACCCACAGTGAGATGCACTCAAGCAGAGCCCCCAGGTaGAGTCTCTTCCTTGCACGG | + |
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Preference number: 2 (lower is better) Translates to: PGGRCMATQPQTHSEMHSSRAPR*SLFLAR Trigger: CCGTGCAAGGAAGAGACTGCACCTGGGGGCTCTGCT...TGAGTGCATCTCACTGTGGGTTTGGGGCTGAGTGGCCATGCACCTCCCTCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGGCAGAGATGCAGCTGGCAATGCCACATGCATGTCCAGGCCAGGCCAGGTTTGCTGATTGGGTCTaGCAGGAAGCACAGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: LQAEMQLAMPHACPGQARFADWV*QEAQAP Trigger: TGGGGCCTGTGCTTCCTGTCAGACCCAATCAGCAAA...CCTGGCCTGGCCTGGACATGCATGTGGCATTGCCAGCTGCATCTCTGCCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGAGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCACAAGGCACAGTCCACCACATACACCCTaGTCCCATCCTCGGCCACTA | + |
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Preference number: 2 (lower is better) Translates to: SEMHSGPDAPAGQSTRHSPPHTP*SHPRPL Trigger: TAGTGGCCGAGGATGGGAGCAGGGTGTATGTGGTGG...ACTGTGCCTTGTGCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCACAGCAATCAGGCTAAGGTCCTACCAACACCAAGGGCAGCCTTGCAGGCTGTGTCTAGCAGGGGCTaGCCTGGACCCCCAAGCCGA | + |
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Preference number: 2 (lower is better) Translates to: MHSNQAKVLPTPRAALQAVSSRG*PGPPSR Trigger: TCGGCTTGGGGGTCCAGGCCAGCCCCTGCTAGACAC...AGCCTGCAAGGCTGCCCTTGGTGTTGGTAGGACCTTAGCCTGATTGCTGTGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR CAA 90 bp | CTGCTCCCATCCTCGGCCACTAGCTGGGTCACTGTACGTGGAAGGTaGGGGCGTTCACGCCGTCGTTTCAGTTTCATCTCCAGGAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: LLPSSATSWVTVRGR*GRSRRRFSFISRSK Trigger: CTTGCTCCTGGAGATGAAACTGAAACGACGGCGTGAACGCCCCAACCTTCCACGTACAGTGACCCAGCTAGTGGCCGAGGATGGGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR-3UTR GCA 90 bp | CCATCCAGTACAGGCTATAGCCCAGGAGACCAAAGAAGGCCGCCTTCACAGCCAAGCAGAGCCCCCAGGTaGAGTCTCTTCCTTGCACGG | + |
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Preference number: 2 (lower is better) Translates to: PSSTGYSPGDQRRPPSQPSRAPR*SLFLAR Trigger: CCGTGCAAGGAAGAGACTGCACCTGGGGGCTCTGCT...TGGCTGTGAAGGCGGCCTTCTTTGGTCTCCTGGGCTATAGCCTGTACTGGATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169870.8 ENSMUST00000169891.8 |
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| 3UTR-3UTR GCA 90 bp | AAACCCACAGTGAGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCACAAAGGGGGTGGCTTGGATaGATCTGTCCCCAGGGACAT | + |
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Preference number: 2 (lower is better) Translates to: KPTVRCTQAQMLLPARAQRGWLG*ICPQGH Trigger: ATGTCCCTGGGGACAGATGCATCCAAGCCACCCCCT...TTGTGCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCACTGTGGGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCACAGTGAGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCACAAGGGGTAGAGCAACAGCTTaGCAAACCCACCTGGGGTTA | + |
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Preference number: 2 (lower is better) Translates to: THSEMHSGPDAPAGQSTRGRATA*QTHLGL Trigger: TAACCCCAGGTGGGTTTGGCAAGCTGTTGCTCTACC...CCTTGTGCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCACTGTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCACAGCAATCAGGCTAAGGTCCTACCAACACCAAGGGCAGCCTTGCAGGCTGGGTGGGCTGGGCATTaGGAAGGCAGGGAAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: MHSNQAKVLPTPRAALQAGWAGH*EGRESL Trigger: CAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCC...AGCCTGCAAGGCTGCCCTTGGTGTTGGTAGGACCTTAGCCTGATTGCTGTGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| 3UTR-3UTR TCA 90 bp | CAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAGGCGCCAGCTCCTCGTaGGCACCCCACTCGGCGCAG | + |
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Preference number: 2 (lower is better) Translates to: QTVKYSLFGWAGHWEGREGASSS*APHSAQ Trigger: CTGCGCCGAGTGGGGTGCTCACGAGGAGCTGGCGCC...TTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169870.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCCACAAAACCAGACTCTCTGCAGGCAGAGATGCAGCTGGCAATGCCACATGCTGTGCAGCAGGCAGTaGCAGGACCAGGTTCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: TPQNQTLCRQRCSWQCHMLCSRQ*QDQVQG Trigger: ACCCTGAACCTGGTCCTGTCACTGCCTGCTGCACAG...CATGTGGCATTGCCAGCTGCATCTCTGCCTGCAGAGAGTCTGGTTTTGTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCACAAGGCACAGTGCTATCATCACTGAAGTaGGCAGTGCCCACCACATAC | + |
|
Preference number: 2 (lower is better) Translates to: VRCTQAQMLLPARAQGTVLSSLK*AVPTTY Trigger: GTATGTGGTGGGCACTGCTCACTTCAGTGATGATAG...CACTGTGCCTTGTGCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGCACAGCAATCAGGCTAAGGTCCTACCAACACCAAGGGCAGCCTTGCAGGCTAGCAGAGCCCCCAGGTaGAGTCTCTTCCTTGCACGG | + |
|
Preference number: 2 (lower is better) Translates to: MHSNQAKVLPTPRAALQASRAPR*SLFLAR Trigger: CCGTGCAAGGAAGAGACTGCACCTGGGGGCTCTGCT...AGCCTGCAAGGCTGCCCTTGGTGTTGGTAGGACCTTAGCCTGATTGCTGTGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGACAATGGTGCGATGCAGGTCAGGAAACTCCCCAATCATCTCGGCCATCATCCACCCAGGAGGGAGGTaGATGGCCACTCAGCCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: ETMVRCRSGNSPIISAIIHPGGR*MATQPQ Trigger: TTGGGGCTGAGTGGCCATGCACCTCCCTCCTGGGTG...GATGATGGCCGAGATGATTGGGGAGTTTCCTGACCTGCATCGCACCATTGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCCACAAGTGTGAGACAGAGTACACAGCCAGCCAGCCCTGTGTCCCCACCCAGCAAAACCAGACTCTCTaGAGGCAGAGATGCAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VHKCETEYTASQPCVPTQQNQTL*RQRCSW Trigger: CCAGCTGCATCTCTGCCTGCAGAGAGTCTGGTTTTG...CTGGGTGGGGACACAGGGCTGGCTGGCTGTGTACTCTGTCTCACACTTGTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGAGGGAGGTGCATGGCCACTCAGCCCCAAACCCACAGTGAGATGCACTCATTTATTTGGGTGGGCTaGGCATTGGGAAGGCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: PGGRCMATQPQTHSEMHSFIWVG*ALGRQG Trigger: TCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAA...TGAGTGCATCTCACTGTGGGTTTGGGGCTGAGTGGCCATGCACCTCCCTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCCCACAAAACCAGACTCTCTGCAGGCAGAGATGCAGCTGGCAATGCCACATGTTCTGCCTGACAGCCTaGTGCAGCTTCTCCAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TPQNQTLCRQRCSWQCHMFCLTA*CSFSRL Trigger: CAGCCTGGAGAAGCTGCAGCAGGCTGTCAGGCAGAA...CATGTGGCATTGCCAGCTGCATCTCTGCCTGCAGAGAGTCTGGTTTTGTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR-3UTR GCA 90 bp | ATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAAGCAGAGCCCCCAGGTaGAGTCTCTTCCTTGCACGG | + |
|
Preference number: 2 (lower is better) Translates to: IFFIWVGWALGRQGKPGLSRAPR*SLFLAR Trigger: CCGTGCAAGGAAGAGACTGCACCTGGGGGCTCTGCT...TAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169870.8 ENSMUST00000169891.8 |
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| 3UTR CAA 90 bp | TCTTTGCTGATTGGGTCTGACAGGAAGCACAGGCCCCAGGCCAGCTaGACTTTCTGCCAGAAGGAGAGTGCAGCAATGGCCCTCTTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SLLIGSDRKHRPQAS*TFCQKESAAMALLK Trigger: CTTTAAGAGGGCCATTGCTGCACTCTCCTTCTGGCAGAAAGTCAAGCTGGCCTGGGGCCTGTGCTTCCTGTCAGACCCAATCAGCAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGGATGTTGAGGTCGGTACTCCAGTTCTTCTCAATGCCAGGCACATGCCCCATTGCCCAGCTGCTCAGTaGTGTGAGCAGACACCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: LDVEVGTPVLLNARHMPHCPAAQ*CEQTPS Trigger: TGAAGGTGTCTGCTCACATCACTGAGCAGCTGGGCA...ATGGGGCATGTGCCTGGCATTGAGAAGAACTGGAGTACCGACCTCAACATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGACAGGAAGCACAGGCCCCAGGCCAGCTTGACTTTCTGCCAGAAGGAGAGTGGCTGCTGGGAAGCCTaGGCTCAGACAGTTAAATAT | + |
|
Preference number: 2 (lower is better) Translates to: SDRKHRPQASLTFCQKESGCWEA*AQTVKY Trigger: ATATTTAACTGTCTGAGCCCAGGCTTCCCAGCAGCC...ACTCTCCTTCTGGCAGAAAGTCAAGCTGGCCTGGGGCCTGTGCTTCCTGTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTGAGGTCGGTACTCCAGTTCTTCTCAATGCCAGGCACATGCCCCATGCCAACCACCCAGGTGGAATTTaGAGAATGGTACCTTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VEVGTPVLLNARHMPHANHPGGI*RMVPCW Trigger: CCAGCAAGGTACCATTCTGCAAATTCCACCTGGGTG...GTTGGCATGGGGCATGTGCCTGGCATTGAGAAGAACTGGAGTACCGACCTCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAGGCCCCCATAGGGGGTaGCTTGGATGCATCTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: QTVKYSLFGWAGHWEGREGPHRG*LGCICP Trigger: GGGACAGATGCATCCAAGCCACCCCCTATGGGGGCC...TTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169870.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGCAGGCAGAGATGCAGCTGGCAATGCCACATGCATGTCCAGGCCAGGCCAGGACACAAATAAAAAGATaGCTTCTTTGTCCTCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: LQAEMQLAMPHACPGQARTQIKR*LLCPHW Trigger: CCAGTGAGGACAAAGAAGTCATCTTTTTATTTGTGT...CCTGGCCTGGCCTGGACATGCATGTGGCATTGCCAGCTGCATCTCTGCCTGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCGTGTCTCACCTGATTTGGCAGCCAACACAAGGACAATCAATGTGGTCTAGGCAAAACCAGACTCTCTaGAGGCAGAGATGCAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SVSHLIWQPTQGQSMWSRQNQTL*RQRCSW Trigger: CCAGCTGCATCTCTGCCTGCAGAGAGTCTGGTTTTG...CCTAGACCACATTGATTGTCCTTGTGTTGGCTGCCAAATCAGGTGAGACACGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAATTTATTTCTTTCTAGGGAATGAGTCCACAAGTGTGAGACAGAGTACACAGGCACTCAGGCCCAGATaGTCCTGCCGGCCAGAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: KIYFFLGNESTSVRQSTQALRPR*SCRPEH Trigger: GTGCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGC...CTGTGTACTCTGTCTCACACTTGTGGACTCATTCCCTAGAAAGAAATAAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| 3UTR CCA 72 bp | TCCTCCTACCGGCCTGGCCGGGCTTCGCTCACCCTCTaGAGGCAGAACTGTGCAGCAGGCAGTGACAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: SSYRPGRASLTL*RQNCAAGSDRT Trigger: GGTCCTGTCACTGCCTGCTGCACAGTTCTGCCTCCAGAGGGTGAGCGAAGCCCGGCCAGGCCGGTAGGAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169870.8 ENSMUST00000169891.8 |
||
| 3UTR CCA 72 bp | GGTCCTGACACTGCGGTTGGCCCTGATGCCCATAGGTaGCCCCACAGTGTGTGTGTGGGCTGCTGGGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GPDTAVGPDAHR*PHSVCVGCWEA Trigger: GGCTTCCCAGCAGCCCACACACACACTGTGGGGCCACCTATGGGCATCAGGGCCAACCGCAGTGTCAGGACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| 3UTR TCA 72 bp | AGGGAGGTGCATGGCCACTCAGCCCCAAACCCACAGTaGGATGCACTCAGGCCCAGATGCTCCTGCCGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: REVHGHSAPNPQ*DALRPRCSCRP Trigger: TGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCACTGTGGGTTTGGGGCTGAGTGGCCATGCACCTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| 3UTR GCA 72 bp | GGTGCATGGCCACTCAGCCCCAAACCCACAGTGAGATaGACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GAWPLSPKPTVR*TQAQMLLPARA Trigger: TGCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCACTGTGGGTTTGGGGCTGAGTGGCCATGCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| 3UTR TCA 72 bp | TCTAGCAGGGGCTGGCCTGGACCCCCAAGCCGACTCTaGCACACACTGCCCACTCAGGGCACACAAACACAA | + |
|
Preference number: 3 (lower is better) Translates to: SSRGWPGPPSRL*HTLPTQGTQTQ Trigger: TTGTGTTTGTGTGCCCTGAGTGGGCAGTGTGTGTCAGAGTCGGCTTGGGGGTCCAGGCCAGCCCCTGCTAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| 3UTR TCA 72 bp | CCTTGGCCTCTCGCAGCAGCGTCCTCTCGTCCATCTTaGGCATGGACACCCGGTACTGACAGAGCTCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: PWPLAAASSRPS*AWTPGTDRAPP Trigger: TGGTGGAGCTCTGTCAGTACCGGGTGTCCATGCTCAAGATGGACGAGAGGACGCTGCTGCGAGAGGCCAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR CCA 72 bp | ACCACATACACCCTGCTCCCATCCTCGGCCACTAGCTaGGTCACTGTACGTGGAAGGTTGGGGCGTTCACGC | + |
|
Preference number: 3 (lower is better) Translates to: TTYTLLPSSATS*VTVRGRLGRSR Trigger: GCGTGAACGCCCCAACCTTCCACGTACAGTGACCCAGCTAGTGGCCGAGGATGGGAGCAGGGTGTATGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR TCA 72 bp | GTCCTCTCGTCCATCTTGAGCATGGACACCCGGTACTaGCAGAGCTCCACCACGACCACATCCGGTTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: VLSSILSMDTRY*QSSTTTTSGCT Trigger: GGTGCAACCGGATGTGGTCGTGGTGGAGCTCTGTCAGTACCGGGTGTCCATGCTCAAGATGGACGAGAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR GCA 72 bp | AGGTCGGTACTCCAGTTCTTCTCAATGCCAGGCACATaGCCCATGCCAACGACGCCCACAACCACAGACGGG | + |
|
Preference number: 3 (lower is better) Translates to: RSVLQFFSMPGT*PMPTTPTTTDG Trigger: CCCGTCTGTGGTTGTGGGCGTCGTTGGCATGGGGCATGTGCCTGGCATTGAGAAGAACTGGAGTACCGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR CCA 72 bp | CCCCCTCAGTTTCTGGTCCTTTTGGAACTAGGCCGCTaGGTCCTGACACTGCGGTTGGCCCTGATGCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: PPQFLVLLELGR*VLTLRLALMPI Trigger: TATGGGCATCAGGGCCAACCGCAGTGTCAGGACCCAGCGGCCTAGTTCCAAAAGGACCAGAAACTGAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTCTCAGTGCCTCCCCCTCAGTTTCTGGTCCTTTTGGAACTAGGCCGCTGGGTCCTCTCGTCCATCTaGAGCATGGACACCCGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: GVSVPPPQFLVLLELGRWVLSSI*SMDTRY Trigger: GTACCGGGTGTCCATGCTCAAGATGGACGAGAGGAC...CCAGCGGCCTAGTTCCAAAAGGACCAGAAACTGAGGGGGAGGCACTGAGACACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR GCA 72 bp | ATCAGGCTAAGGTCCTACCAACACCAAGGGCAGCCTTaGAGGCTCATATCTGAGGCAGCCCCACGCCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: IRLRSYQHQGQP*RLISEAAPRHS Trigger: AGAGTGGCGTGGGGCTGCCTCAGATATGAGCCTGCAAGGCTGCCCTTGGTGTTGGTAGGACCTTAGCCTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| 3UTR CCA 72 bp | CCTCGGCCACTAGCTGGGTCACTGTACGTGGAAGGTTaGGGCGTTCACGCCGTCGTTTCAGTTTCATCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PRPLAGSLYVEG*GVHAVVSVSSP Trigger: TGGAGATGAAACTGAAACGACGGCGTGAACGCCCCAACCTTCCACGTACAGTGACCCAGCTAGTGGCCGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR TCA 72 bp | GCTGTGCCATATACTAGGAGCCACAGCCTGTACACATaGATGGCTGGCTGCACACAAACCAGCCGTGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: AVPYTRSHSLYT*MAGCTQTSRGP Trigger: TGGGCCACGGCTGGTTTGTGTGCAGCCAGCCATTCATGTGTACAGGCTGTGGCTCCTAGTATATGGCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| 3UTR GCA 72 bp | AGCACAAGGCACAGTGAGGTAGGTAGAGCAACAGCTTaGCAAACCCACCTGGGGTTAAGGGTGGGGTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: STRHSEVGRATA*QTHLGLRVGCL Trigger: GAGACACCCCACCCTTAACCCCAGGTGGGTTTGGCAAGCTGTTGCTCTACCTACCTCACTGTGCCTTGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| 3UTR GCA 72 bp | TACTCCAGTTCTTCTCAATGCCAGGCACATGCCCCATaGCAACGACGCCCACAACCACAGACGGGACACACT | + |
|
Preference number: 3 (lower is better) Translates to: YSSSSQCQAHAP*QRRPQPQTGHT Trigger: AGTGTGTCCCGTCTGTGGTTGTGGGCGTCGTTGGCATGGGGCATGTGCCTGGCATTGAGAAGAACTGGAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR CCA 72 bp | TGCCATATACTAGGAGCCACAGCCTGTACACATGAATaGCTGGCTGCACACAAACCAGCCGTGGCCCATAGT | + |
|
Preference number: 3 (lower is better) Translates to: CHILGATACTHE*LAAHKPAVAHS Trigger: ACTATGGGCCACGGCTGGTTTGTGTGCAGCCAGCCATTCATGTGTACAGGCTGTGGCTCCTAGTATATGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCACAAGTGTGAGACAGAGTACACAGCCAGCCAGCCCTGTGTCCCCACCCAGTTAAATATTCTTTATTaGGGTGGGCTGGGCATTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VHKCETEYTASQPCVPTQLNILY*GGLGIG Trigger: CCCAATGCCCAGCCCACCCAAATAAAGAATATTTAA...CTGGGTGGGGACACAGGGCTGGCTGGCTGTGTACTCTGTCTCACACTTGTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| 3UTR CCA 72 bp | GAGTGCAGCAATGGCCCTCTTAAAGGTGACTGGGATTaGTCGGTCACCCAGGTGGAATTTGCAGAATGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: ECSNGPLKGDWD*SVTQVEFAEWY Trigger: GTACCATTCTGCAAATTCCACCTGGGTGACCGACCAATCCCAGTCACCTTTAAGAGGGCCATTGCTGCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR CCA 72 bp | GAAGGAGAGTGCAGCAATGGCCCTCTTAAAGGTGACTaGGATTGGTCGGTCACCCAGGTGGAATTTGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: EGECSNGPLKGD*DWSVTQVEFAE Trigger: TTCTGCAAATTCCACCTGGGTGACCGACCAATCCCAGTCACCTTTAAGAGGGCCATTGCTGCACTCTCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR GCA 72 bp | TATAGGTCAGATAGACGTCACGCTCTGAGACAATGGTaGGATGCAGGTCAGGAAACTCCCCAATCATCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: YRSDRRHALRQW*DAGQETPQSSR Trigger: CCGAGATGATTGGGGAGTTTCCTGACCTGCATCGCACCATTGTCTCAGAGCGTGACGTCTATCTGACCTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR CCA 72 bp | CTCTTAAAGGTGACTGGGATTGGTCGGTCACCCAGGTaGAATTTGCAGAATGGTACCTTGCTGGCCTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LLKVTGIGRSPR*NLQNGTLLASL Trigger: CAAAGAGGCCAGCAAGGTACCATTCTGCAAATTCCACCTGGGTGACCGACCAATCCCAGTCACCTTTAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGGCTGTGCCATATACTAGGAGCCACAGCCTGTACACATGAATGGCTGGCTTTAAATATTCTTTATTaGGGTGGGCTGGGCATTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ARLCHILGATACTHEWLALNILY*GGLGIG Trigger: CCCAATGCCCAGCCCACCCAAATAAAGAATATTTAA...AGCCAGCCATTCATGTGTACAGGCTGTGGCTCCTAGTATATGGCACAGCCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| 3UTR GCA 72 bp | AAGGACAATCAATGTGGTCTAGGTCTTGCCAGGCTGTaGCATATACTAGGAGCCACAGCCTGTACACATGAA | + |
|
Preference number: 3 (lower is better) Translates to: KDNQCGLGLARL*HILGATACTHE Trigger: TTCATGTGTACAGGCTGTGGCTCCTAGTATATGGCACAGCCTGGCAAGACCTAGACCACATTGATTGTCCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCCCATAGGGGGTGGGGCCCCAGGCCAGCTTaGCTTTCTGCCAGAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GWALGRQGKPGLGPHRGWGPRPA*LSARRR Trigger: TCTCCTTCTGGCAGAAAGTCAAGCTGGCCTGGGGCC...CCACCCCCTATGGGGGCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR TCA 90 bp | CGGCCTGGCCGGGCTTCGCTCACCCTCTGGAGGCAGAACTGTGCAGCAGGCAGTGGCCCCAGGCCAGCTTaGCTTTCTGCCAGAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPGRASLTLWRQNCAAGSGPRPA*LSARRR Trigger: TCTCCTTCTGGCAGAAAGTCAAGCTGGCCTGGGGCC...ACTGCCTGCTGCACAGTTCTGCCTCCAGAGGGTGAGCGAAGCCCGGCCAGGCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCCCATAGGGGGTGGCTGTGCAGCAGGCAGTaGCAGGACCAGGTTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GWALGRQGKPGLGPHRGWLCSRQ*QDQVQG Trigger: ACCCTGAACCTGGTCCTGTCACTGCCTGCTGCACAG...CCACCCCCTATGGGGGCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 |
||
| CDS-3UTR GCA 90 bp | CCCCAAACCCACAGTGAGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCCCACCCGGGACACTCTaGCTGAGATGGACGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PQTHSEMHSGPDAPAGQSPPGTL*LRWTVG Trigger: CCCCACCGTCCATCTCAGGCAGAGTGTCCCGGGTGG...GCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCACTGTGGGTTTGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| CDS-3UTR TCA 90 bp | CCCTCTGGAGGCAGAACTGTGCAGCAGGCAGTGACAGGACCAGGTTCAGGGTCCGCAGCTTCTCCAGGCTaGCCTCCTTGGCCTCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSGGRTVQQAVTGPGSGSAASPG*PPWPLA Trigger: TGCGAGAGGCCAAGGAGGTCAGCCTGGAGAAGCTGC...GGACCCTGAACCTGGTCCTGTCACTGCCTGCTGCACAGTTCTGCCTCCAGAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
||
| CDS-3UTR CCA 90 bp | CGGCCTGGCCGGGCTTCGCTCACCCTCTGGAGGCAGAACTGTGCAGCAGGCAGTACGGGACACACTTCCTaGGCTCAGCTTTCCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: RPGRASLTLWRQNCAAGSTGHTS*AQLSIT Trigger: GGTGATGGAAAGCTGAGCCCAGGAAGTGTGTCCCGT...ACTGCCTGCTGCACAGTTCTGCCTCCAGAGGGTGAGCGAAGCCCGGCCAGGCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
||
| CDS-3UTR TCA 90 bp | CGGCCTGGCCGGGCTTCGCTCACCCTCTGGAGGCAGAACTGTGCAGCAGGCAGTACATCAGAGATGTTCTaGGGGTCTCCAGCAAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RPGRASLTLWRQNCAAGSTSEMF*GSPAST Trigger: GGTGCTTGCTGGAGACCCTCAGAACATCTCTGATGT...ACTGCCTGCTGCACAGTTCTGCCTCCAGAGGGTGAGCGAAGCCCGGCCAGGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
||
| CDS-3UTR TCA 90 bp | CTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCGCAGCTTCTCCAGGCTaGCCTCCTTGGCCTCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYLGGLGIGKAGKAWPRPAASPG*PPWPLA Trigger: TGCGAGAGGCCAAGGAGGTCAGCCTGGAGAAGCTGC...GGGCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCCCATAGGGGGTGGACAGGTCCTTCTGTTTaGAGCGCTCCACGTCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GWALGRQGKPGLGPHRGWTGPSV*SAPRRL Trigger: AAGACGACGTGGAGCGCTGCAAACAGAAGGACCTGT...CCACCCCCTATGGGGGCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCCCATAGGGGGTGGAAAGGTGACTGGGATTaGTCGGTCACCCAGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GWALGRQGKPGLGPHRGWKGDWD*SVTQVE Trigger: TTCCACCTGGGTGACCGACCAATCCCAGTCACCTTT...CCACCCCCTATGGGGGCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR TCA 90 bp | AGACCAAAGAAGGCCGCCTTCACAGCCACCCGGGACACTCTGCCTGAGATGGACTCCACGTCAGCCTCTTaGGCTGGCTTCTCCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RPKKAAFTATRDTLPEMDSTSAS*AGFSSP Trigger: GGGAGAGGAGAAGCCAGCTCAAGAGGCTGACGTGGA...GTCCATCTCAGGCAGAGTGTCCCGGGTGGCTGTGAAGGCGGCCTTCTTTGGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169870.8 ENSMUST00000169891.8 |
||
| CDS-3UTR TCA 90 bp | CGGCCTGGCCGGGCTTCGCTCACCCTCTGGAGGCAGAACTGTGCAGCAGGCAGTCTATCATCACTGAAGTaGGCAGTGCCCACCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: RPGRASLTLWRQNCAAGSLSSLK*AVPTTY Trigger: GTATGTGGTGGGCACTGCTCACTTCAGTGATGATAG...ACTGCCTGCTGCACAGTTCTGCCTCCAGAGGGTGAGCGAAGCCCGGCCAGGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
||
| CDS-3UTR GCA 90 bp | ACCCACAGTGAGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCACAAGGCCACCACATACACCCTaGTCCCATCCTCGGCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: THSEMHSGPDAPAGQSTRPPHTP*SHPRPL Trigger: TAGTGGCCGAGGATGGGAGCAGGGTGTATGTGGTGG...CCTTGTGCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCACTGTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| CDS-3UTR GCA 90 bp | GGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCCCATAGGGGGTGGATCTCGGCCATCATCTaGTCCAACAGGTCCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GWALGRQGKPGLGPHRGWISAII*SNRSFC Trigger: ACAGAAGGACCTGTTGGAGCAGATGATGGCCGAGAT...CCACCCCCTATGGGGGCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR GCA 90 bp | GTCCACAAGTGTGAGACAGAGTACACAGCCAGCCAGCCCTGTGTCCCCACCCAGCAGGCACATGCCCCATaGCAACGACGCCCACAACCA | + |
|
Preference number: 4 (lower is better) Translates to: VHKCETEYTASQPCVPTQQAHAP*QRRPQP Trigger: TGGTTGTGGGCGTCGTTGGCATGGGGCATGTGCCTG...CTGGGTGGGGACACAGGGCTGGCTGGCTGTGTACTCTGTCTCACACTTGTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| CDS-3UTR GCA 90 bp | CTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCTCAATGCCAGGCACATaGCCCATGCCAACGACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LYLGGLGIGKAGKAWPRPSMPGT*PMPTTP Trigger: GGGCGTCGTTGGCATGGGGCATGTGCCTGGCATTGA...GGGCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGTCCGACGGCCCATCCAGTACAGGCTATAGCCCAGGAGACCAAAGAAGGCTCAATGCCAGGCACATaGCCCATGCCAACGACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QGPTAHPVQAIAQETKEGSMPGT*PMPTTP Trigger: GGGCGTCGTTGGCATGGGGCATGTGCCTGGCATTGA...GCCTTCTTTGGTCTCCTGGGCTATAGCCTGTACTGGATGGGCCGTCGGACCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCACCCGGGACACTCTaGCTGAGATGGACGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FFIWVGWALGRQGKPGLGPPGTL*LRWTVG Trigger: CCCCACCGTCCATCTCAGGCAGAGTGTCCCGGGTGG...GCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGGAGGTGCATGGCCACTCAGCCCCAAACCCACAGTGAGATGCACTCAACGGGACACACTTCCTaGGCTCAGCATCAGAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PGGRCMATQPQTHSEMHSTGHTS*AQHQRR Trigger: GCGCCTCTGATGCTGAGCCCAGGAAGTGTGTCCCGT...TGAGTGCATCTCACTGTGGGTTTGGGGCTGAGTGGCCATGCACCTCCCTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| 3UTR CAA 72 bp | CTTTTGGAACTAGGCCGCTGGGTCCTGACACTGCGGTaGGCCCTGATGCCCATAGGTGGCCCCACAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLELGRWVLTLR*ALMPIGGPTVC Trigger: ACACACTGTGGGGCCACCTATGGGCATCAGGGCCAACCGCAGTGTCAGGACCCAGCGGCCTAGTTCCAAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| CDS-3UTR TCA 90 bp | GGTGTCTCAGTGCCTCCCCCTCAGTTTCTGGTCCTTTTGGAACTAGGCCGCTGGTCCACGTCAGCCTCTTaGGCTGGCTTCTCCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GVSVPPPQFLVLLELGRWSTSAS*AGFSSP Trigger: GGGAGAGGAGAAGCCAGCTCAAGAGGCTGACGTGGA...CCAGCGGCCTAGTTCCAAAAGGACCAGAAACTGAGGGGGAGGCACTGAGACACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| CDS-3UTR TCA 90 bp | GGTCCGACGGCCCATCCAGTACAGGCTATAGCCCAGGAGACCAAAGAAGGCCGCTCCTCTCGTCCATCTTaGGCATGGACACCCGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GPTAHPVQAIAQETKEGRSSRPS*AWTPGT Trigger: AGTACCGGGTGTCCATGCTCAAGATGGACGAGAGGA...GCGGCCTTCTTTGGTCTCCTGGGCTATAGCCTGTACTGGATGGGCCGTCGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCTGGAGGCAGAACTGTGCAGCAGGCAGTGACAGGACCAGGTTCAGGGTCCTGCCCAGCTGCTCAGTaGTGTGAGCAGACACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSGGRTVQQAVTGPGSGSCPAAQ*CEQTPS Trigger: TGAAGGTGTCTGCTCACATCACTGAGCAGCTGGGCA...GGACCCTGAACCTGGTCCTGTCACTGCCTGCTGCACAGTTCTGCCTCCAGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
||
| CDS-3UTR GCA 90 bp | CTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCTTCTGCCTGACAGCCTaGTGCAGCTTCTCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LYLGGLGIGKAGKAWPRPFCLTA*CSFSRL Trigger: CAGCCTGGAGAAGCTGCAGCAGGCTGTCAGGCAGAA...GGGCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR GCA 90 bp | AGACCAAAGAAGGCCGCCTTCACAGCCACCCGGGACACTCTGCCTGAGATGGACTTCTGCCTGACAGCCTaGTGCAGCTTCTCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPKKAAFTATRDTLPEMDFCLTA*CSFSRL Trigger: CAGCCTGGAGAAGCTGCAGCAGGCTGTCAGGCAGAA...GTCCATCTCAGGCAGAGTGTCCCGGGTGGCTGTGAAGGCGGCCTTCTTTGGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
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| CDS-3UTR CCA 90 bp | AGCCCAGGAGACCAAAGAAGGCCGCCTTCACAGCCACCCGGGACACTCTGCCTGAAAGGTGACTGGGATTaGTCGGTCACCCAGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPGDQRRPPSQPPGTLCLKGDWD*SVTQVE Trigger: TTCCACCTGGGTGACCGACCAATCCCAGTCACCTTT...CAGGCAGAGTGTCCCGGGTGGCTGTGAAGGCGGCCTTCTTTGGTCTCCTGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCACAAGGCACAGTGACATCAGAGATGTTCTaGGGGTCTCCAGCAAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: VRCTQAQMLLPARAQGTVTSEMF*GSPAST Trigger: GGTGCTTGCTGGAGACCCTCAGAACATCTCTGATGT...CACTGTGCCTTGTGCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| CDS-3UTR TCA 90 bp | GCCAGGCTGTGCCATATACTAGGAGCCACAGCCTGTACACATGAATGGCTGGCTGCAGCTTCTCCAGGCTaGCCTCCTTGGCCTCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARLCHILGATACTHEWLAAASPG*PPWPLA Trigger: TGCGAGAGGCCAAGGAGGTCAGCCTGGAGAAGCTGC...AGCCAGCCATTCATGTGTACAGGCTGTGGCTCCTAGTATATGGCACAGCCTGGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| CDS-3UTR TCA 90 bp | CGCTCACCCTCTGGAGGCAGAACTGTGCAGCAGGCAGTGACAGGACCAGGTTCAAGCTGCTCAGTGATGTaGGCAGACACCTTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSPSGGRTVQQAVTGPGSSCSVM*ADTFSS Trigger: GCTGCTGAAGGTGTCTGCTCACATCACTGAGCAGCT...TGAACCTGGTCCTGTCACTGCCTGCTGCACAGTTCTGCCTCCAGAGGGTGAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
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| CDS-3UTR TCA 90 bp | CTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCTGCCCAGCTGCTCAGTaGTGTGAGCAGACACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LYLGGLGIGKAGKAWPRPCPAAQ*CEQTPS Trigger: TGAAGGTGTCTGCTCACATCACTGAGCAGCTGGGCA...GGGCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
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| CDS-3UTR TCA 90 bp | TCCGACGGCCCATCCAGTACAGGCTATAGCCCAGGAGACCAAAGAAGGCCGCCTTTTGCTGATTGGGTCTaGCAGGAAGCACAGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SDGPSSTGYSPGDQRRPPFADWV*QEAQAP Trigger: TGGGGCCTGTGCTTCCTGTCAGACCCAATCAGCAAA...AGGCGGCCTTCTTTGGTCTCCTGGGCTATAGCCTGTACTGGATGGGCCGTCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
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| CDS-3UTR TCA 90 bp | TTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCTGTGCAGCAGGCAGTaGCAGGACCAGGTTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FFIWVGWALGRQGKPGLGLCSRQ*QDQVQG Trigger: ACCCTGAACCTGGTCCTGTCACTGCCTGCTGCACAG...GCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 |
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| CDS-3UTR GCA 90 bp | GGTCCGACGGCCCATCCAGTACAGGCTATAGCCCAGGAGACCAAAGAAGGCCGCGCACTGCTTCTGAGGTaGCTGCTGTTACCACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPTAHPVQAIAQETKEGRALLLR*LLLPQV Trigger: AACCTGTGGTAACAGCAGGCACCTCAGAAGCAGTGC...GCGGCCTTCTTTGGTCTCCTGGGCTATAGCCTGTACTGGATGGGCCGTCGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169870.8 ENSMUST00000169891.8 |
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| CDS-3UTR GCA 90 bp | GGTCCGACGGCCCATCCAGTACAGGCTATAGCCCAGGAGACCAAAGAAGGCCGCACAGGTCCTTCTGTTTaGAGCGCTCCACGTCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GPTAHPVQAIAQETKEGRTGPSV*SAPRRL Trigger: AAGACGACGTGGAGCGCTGCAAACAGAAGGACCTGT...GCGGCCTTCTTTGGTCTCCTGGGCTATAGCCTGTACTGGATGGGCCGTCGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
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| CDS-3UTR GCA 90 bp | GTGAGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCACAAGGCACAGTGTCCAGTTCTTCTCAATaGCAGGCACATGCCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: VRCTQAQMLLPARAQGTVSSSSQ*QAHAPC Trigger: GCATGGGGCATGTGCCTGGCATTGAGAAGAACTGGA...CACTGTGCCTTGTGCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
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| CDS-3UTR CCA 90 bp | CCCTCTGGAGGCAGAACTGTGCAGCAGGCAGTGACAGGACCAGGTTCAGGGTCCCCTCTTAAAGGTGACTaGGATTGGTCGGTCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSGGRTVQQAVTGPGSGSPLKGD*DWSVTQ Trigger: CTGGGTGACCGACCAATCCCAGTCACCTTTAAGAGG...GGACCCTGAACCTGGTCCTGTCACTGCCTGCTGCACAGTTCTGCCTCCAGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
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| CDS-3UTR TCA 90 bp | ACTGTACGTGGAAGGTTGGGGCGTTCACGCCGTCGTTTCAGTTTCATCTCCAGGTCCACGTCAGCCTCTTaGGCTGGCTTCTCCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TVRGRLGRSRRRFSFISRSTSAS*AGFSSP Trigger: GGGAGAGGAGAAGCCAGCTCAAGAGGCTGACGTGGA...CCTGGAGATGAAACTGAAACGACGGCGTGAACGCCCCAACCTTCCACGTACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCTTGGCACTGCTTCTaGGGTGCCTGCTGTTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFIWVGWALGRQGKPGLGPWHCF*GACCYH Trigger: GTGGTAACAGCAGGCACCTCAGAAGCAGTGCCAAGG...GCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169870.8 ENSMUST00000169891.8 |
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| CDS-3UTR TCA 90 bp | ATGCACAGCAATCAGGCTAAGGTCCTACCAACACCAAGGGCAGCCTTGCAGGCTATGGACACCCGGTACTaGCAGAGCTCCACCACGACC | + |
|
Preference number: 4 (lower is better) Translates to: MHSNQAKVLPTPRAALQAMDTRY*QSSTTT Trigger: GGTCGTGGTGGAGCTCTGTCAGTACCGGGTGTCCAT...AGCCTGCAAGGCTGCCCTTGGTGTTGGTAGGACCTTAGCCTGATTGCTGTGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
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| CDS-3UTR GCA 90 bp | TCCGACGGCCCATCCAGTACAGGCTATAGCCCAGGAGACCAAAGAAGGCCGCCTGCACTGCTTCTGAGGTaGCTGCTGTTACCACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SDGPSSTGYSPGDQRRPPALLLR*LLLPQV Trigger: AACCTGTGGTAACAGCAGGCACCTCAGAAGCAGTGC...AGGCGGCCTTCTTTGGTCTCCTGGGCTATAGCCTGTACTGGATGGGCCGTCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169870.8 ENSMUST00000169891.8 |
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| CDS-3UTR GCA 90 bp | CCCTCTGGAGGCAGAACTGTGCAGCAGGCAGTGACAGGACCAGGTTCAGGGTCCCACCCAGGTGGAATTTaGAGAATGGTACCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSGGRTVQQAVTGPGSGSHPGGI*RMVPCW Trigger: CCAGCAAGGTACCATTCTGCAAATTCCACCTGGGTG...GGACCCTGAACCTGGTCCTGTCACTGCCTGCTGCACAGTTCTGCCTCCAGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGCACAAGGCACAGTGAGGTAGGTAGAGCAACAGCTTGCCAAACCCACCTGTCAATGCCAGGCACATaGCCCATGCCAACGACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QSTRHSEVGRATACQTHLSMPGT*PMPTTP Trigger: GGGCGTCGTTGGCATGGGGCATGTGCCTGGCATTGA...CAGGTGGGTTTGGCAAGCTGTTGCTCTACCTACCTCACTGTGCCTTGTGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| CDS-3UTR CCA 90 bp | CTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCGGTCGGTCACCCAGGTaGAATTTGCAGAATGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LYLGGLGIGKAGKAWPRPGRSPR*NLQNGT Trigger: GGTACCATTCTGCAAATTCCACCTGGGTGACCGACC...GGGCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR CCA 90 bp | GTCCACAAGTGTGAGACAGAGTACACAGCCAGCCAGCCCTGTGTCCCCACCCAGAAAGGTGACTGGGATTaGTCGGTCACCCAGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VHKCETEYTASQPCVPTQKGDWD*SVTQVE Trigger: TTCCACCTGGGTGACCGACCAATCCCAGTCACCTTT...CTGGGTGGGGACACAGGGCTGGCTGGCTGTGTACTCTGTCTCACACTTGTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| 3UTR CAA 72 bp | ATTGGGTCTGACAGGAAGCACAGGCCCCAGGCCAGCTaGACTTTCTGCCAGAAGGAGAGTGCAGCAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IGSDRKHRPQAS*TFCQKESAAMA Trigger: GGCCATTGCTGCACTCTCCTTCTGGCAGAAAGTCAAGCTGGCCTGGGGCCTGTGCTTCCTGTCAGACCCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| CDS-3UTR TCA 90 bp | CGCTCACCCTCTGGAGGCAGAACTGTGCAGCAGGCAGTGACAGGACCAGGTTCATCTCCAGGAGCAAGTTaGAGGCATCCACATCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSPSGGRTVQQAVTGPGSSPGAS*RHPHQR Trigger: TCTCTGATGTGGATGCCTTCAACTTGCTCCTGGAGA...TGAACCTGGTCCTGTCACTGCCTGCTGCACAGTTCTGCCTCCAGAGGGTGAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCTCCTCTCGTCCATCTTaGGCATGGACACCCGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: FFIWVGWALGRQGKPGLGSSRPS*AWTPGT Trigger: AGTACCGGGTGTCCATGCTCAAGATGGACGAGAGGA...GCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCAGCTGCTCAGTGATGTaGGCAGACACCTTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FFIWVGWALGRQGKPGLGSCSVM*ADTFSS Trigger: GCTGCTGAAGGTGTCTGCTCACATCACTGAGCAGCT...GCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCTTTGCTGATTGGGTCTaGCAGGAAGCACAGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FFIWVGWALGRQGKPGLGFADWV*QEAQAP Trigger: TGGGGCCTGTGCTTCCTGTCAGACCCAATCAGCAAA...GCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR CCA 90 bp | CCCCAAACCCACAGTGAGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCGTGGAATTTGCAGAATaGTACCTTGCTGGCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PQTHSEMHSGPDAPAGQSVEFAE*YLAGLF Trigger: AAAGAGGCCAGCAAGGTACCATTCTGCAAATTCCAC...GCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCACTGTGGGTTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| CDS-3UTR TCA 90 bp | GGTGTCTCAGTGCCTCCCCCTCAGTTTCTGGTCCTTTTGGAACTAGGCCGCTGGTCTCCAGGAGCAAGTTaGAGGCATCCACATCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVSVPPPQFLVLLELGRWSPGAS*RHPHQR Trigger: TCTCTGATGTGGATGCCTTCAACTTGCTCCTGGAGA...CCAGCGGCCTAGTTCCAAAAGGACCAGAAACTGAGGGGGAGGCACTGAGACACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| CDS-3UTR TCA 90 bp | ATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAATGGACACCCGGTACTaGCAGAGCTCCACCACGACC | + |
|
Preference number: 4 (lower is better) Translates to: IFFIWVGWALGRQGKPGLMDTRY*QSSTTT Trigger: GGTCGTGGTGGAGCTCTGTCAGTACCGGGTGTCCAT...TAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCACAAAACCAGACTCTCTGCAGGCAGAGATGCAGCTGGCAATGCCACATGAGCTGCTCAGTGATGTaGGCAGACACCTTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TPQNQTLCRQRCSWQCHMSCSVM*ADTFSS Trigger: GCTGCTGAAGGTGTCTGCTCACATCACTGAGCAGCT...CATGTGGCATTGCCAGCTGCATCTCTGCCTGCAGAGAGTCTGGTTTTGTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| CDS-3UTR TCA 90 bp | ATGCACAGCAATCAGGCTAAGGTCCTACCAACACCAAGGGCAGCCTTGCAGGCTTTTGCTGATTGGGTCTaGCAGGAAGCACAGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MHSNQAKVLPTPRAALQAFADWV*QEAQAP Trigger: TGGGGCCTGTGCTTCCTGTCAGACCCAATCAGCAAA...AGCCTGCAAGGCTGCCCTTGGTGTTGGTAGGACCTTAGCCTGATTGCTGTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| CDS-3UTR GCA 90 bp | ATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTACAGGCACATGCCCCATaGCAACGACGCCCACAACCA | + |
|
Preference number: 4 (lower is better) Translates to: IFFIWVGWALGRQGKPGLQAHAP*QRRPQP Trigger: TGGTTGTGGGCGTCGTTGGCATGGGGCATGTGCCTG...TAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCTCCAGTTCTTCTCAATaGCAGGCACATGCCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: FFIWVGWALGRQGKPGLGSSSSQ*QAHAPC Trigger: GCATGGGGCATGTGCCTGGCATTGAGAAGAACTGGA...GCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCTCTTAAAGGTGACTaGGATTGGTCGGTCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FFIWVGWALGRQGKPGLGPLKGD*DWSVTQ Trigger: CTGGGTGACCGACCAATCCCAGTCACCTTTAAGAGG...GCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR CCA 90 bp | ATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAACGGGACACACTTCCTaGGCTCAGCATCAGAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IFFIWVGWALGRQGKPGLTGHTS*AQHQRR Trigger: GCGCCTCTGATGCTGAGCCCAGGAAGTGTGTCCCGT...TAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 |
||
| CDS-3UTR GCA 90 bp | ATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTATTCTGCCTGACAGCCTaGTGCAGCTTCTCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFFIWVGWALGRQGKPGLFCLTA*CSFSRL Trigger: CAGCCTGGAGAAGCTGCAGCAGGCTGTCAGGCAGAA...TAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGGCACAGTGAGGTAGGTAGAGCAACAGCTTGCCAAACCCACCTGGGGTTAGACATAAGCCCATTCTaGCTGACAGCCTGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TRHSEVGRATACQTHLGLDISPF*LTACCS Trigger: GCTGCAGCAGGCTGTCAGGCAGAATGGGCTTATGTC...TAACCCCAGGTGGGTTTGGCAAGCTGTTGCTCTACCTACCTCACTGTGCCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| CDS-3UTR GCA 90 bp | ATGCACAGCAATCAGGCTAAGGTCCTACCAACACCAAGGGCAGCCTTGCAGGCTACAGGTCCTTCTGTTTaGAGCGCTCCACGTCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MHSNQAKVLPTPRAALQATGPSV*SAPRRL Trigger: AAGACGACGTGGAGCGCTGCAAACAGAAGGACCTGT...AGCCTGCAAGGCTGCCCTTGGTGTTGGTAGGACCTTAGCCTGATTGCTGTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| CDS-3UTR CCA 90 bp | CTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCGTGGAATTTGCAGAATaGTACCTTGCTGGCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LYLGGLGIGKAGKAWPRPVEFAE*YLAGLF Trigger: AAAGAGGCCAGCAAGGTACCATTCTGCAAATTCCAC...GGGCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| 3UTR CAA 72 bp | AAGGTGACTGGGATTGGTCGGTCACCCAGGTGGAATTaGCAGAATGGTACCTTGCTGGCCTCTTTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KVTGIGRSPRWN*QNGTLLASLKA Trigger: GGCCTTCAAAGAGGCCAGCAAGGTACCATTCTGCAAATTCCACCTGGGTGACCGACCAATCCCAGTCACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| CDS-3UTR TCA 90 bp | ATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTATGCCCAGCTGCTCAGTaGTGTGAGCAGACACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IFFIWVGWALGRQGKPGLCPAAQ*CEQTPS Trigger: TGAAGGTGTCTGCTCACATCACTGAGCAGCTGGGCA...TAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGGCTGTGCCATATACTAGGAGCCACAGCCTGTACACATGAATGGCTGGCTAACATACAGATGTTCTaGGGGTCTCCAGCAAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ARLCHILGATACTHEWLANIQMF*GSPAST Trigger: GGTGCTTGCTGGAGACCCTCAGAACATCTGTATGTT...AGCCAGCCATTCATGTGTACAGGCTGTGGCTCCTAGTATATGGCACAGCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
||
| CDS-3UTR GCA 90 bp | AAACCCCACAAAACCAGACTCTCTGCAGGCAGAGATGCAGCTGGCAATGCCACAGCACTGCTTCTGAGGTaGCTGCTGTTACCACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KPHKTRLSAGRDAAGNATALLLR*LLLPQV Trigger: AACCTGTGGTAACAGCAGGCACCTCAGAAGCAGTGC...TGTGGCATTGCCAGCTGCATCTCTGCCTGCAGAGAGTCTGGTTTTGTGGGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| CDS-3UTR GCA 90 bp | ATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGACATAAGCCCATTCTaGCTGACAGCCTGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IFFIWVGWALGRQGKPGLDISPF*LTACCS Trigger: GCTGCAGCAGGCTGTCAGGCAGAATGGGCTTATGTC...TAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGGCTAAGGTCCTACCAACACCAAGGGCAGCCTTGCAGGCTCATATCTGAGCCTCTTAAAGGTGACTaGGATTGGTCGGTCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IRLRSYQHQGQPCRLISEPLKGD*DWSVTQ Trigger: CTGGGTGACCGACCAATCCCAGTCACCTTTAAGAGG...CTCAGATATGAGCCTGCAAGGCTGCCCTTGGTGTTGGTAGGACCTTAGCCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| CDS-3UTR TCA 90 bp | CAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAATCCACGTCAGCCTCTTaGGCTGGCTTCTCCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QTVKYSLFGWAGHWEGRESTSAS*AGFSSP Trigger: GGGAGAGGAGAAGCCAGCTCAAGAGGCTGACGTGGA...TTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169870.8 |
||
| CDS-3UTR TCA 90 bp | ATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAACATCAGAGATGTTCTaGGGGTCTCCAGCAAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: IFFIWVGWALGRQGKPGLTSEMF*GSPAST Trigger: GGTGCTTGCTGGAGACCCTCAGAACATCTCTGATGT...TAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGGCTAAGGTCCTACCAACACCAAGGGCAGCCTTGCAGGCTCATATCTGAGCTATCATCACTGAAGTaGGCAGTGCCCACCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: IRLRSYQHQGQPCRLISELSSLK*AVPTTY Trigger: GTATGTGGTGGGCACTGCTCACTTCAGTGATGATAG...CTCAGATATGAGCCTGCAAGGCTGCCCTTGGTGTTGGTAGGACCTTAGCCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| CDS-3UTR TCA 90 bp | CAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAATGGACACCCGGTACTaGCAGAGCTCCACCACGACC | + |
|
Preference number: 4 (lower is better) Translates to: QTVKYSLFGWAGHWEGREMDTRY*QSSTTT Trigger: GGTCGTGGTGGAGCTCTGTCAGTACCGGGTGTCCAT...TTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 |
||
| CDS-3UTR GCA 90 bp | CAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAACAGGCACATGCCCCATaGCAACGACGCCCACAACCA | + |
|
Preference number: 4 (lower is better) Translates to: QTVKYSLFGWAGHWEGREQAHAP*QRRPQP Trigger: TGGTTGTGGGCGTCGTTGGCATGGGGCATGTGCCTG...TTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCGTGGAATTTGCAGAATaGTACCTTGCTGGCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FFIWVGWALGRQGKPGLGVEFAE*YLAGLF Trigger: AAAGAGGCCAGCAAGGTACCATTCTGCAAATTCCAC...GCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCACAAAACCAGACTCTCTGCAGGCAGAGATGCAGCTGGCAATGCCACATGACTGTCATGATCTCCTaGATGTTGAGGTCGGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: TPQNQTLCRQRCSWQCHMTVMIS*MLRSVL Trigger: GAGTACCGACCTCAACATCCAGGAGATCATGACAGT...CATGTGGCATTGCCAGCTGCATCTCTGCCTGCAGAGAGTCTGGTTTTGTGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| CDS-3UTR TCA 90 bp | ATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTATCTCCAGGAGCAAGTTaGAGGCATCCACATCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IFFIWVGWALGRQGKPGLSPGAS*RHPHQR Trigger: TCTCTGATGTGGATGCCTTCAACTTGCTCCTGGAGA...TAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR GCA 90 bp | ATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTACACCCAGGTGGAATTTaGAGAATGGTACCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IFFIWVGWALGRQGKPGLHPGGI*RMVPCW Trigger: CCAGCAAGGTACCATTCTGCAAATTCCACCTGGGTG...TAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR GCA 90 bp | ATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAATCTCGGCCATCATCTaGTCCAACAGGTCCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IFFIWVGWALGRQGKPGLISAII*SNRSFC Trigger: ACAGAAGGACCTGTTGGAGCAGATGATGGCCGAGAT...TAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR TCA 90 bp | CAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAATCCTCTCGTCCATCTTaGGCATGGACACCCGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: QTVKYSLFGWAGHWEGRESSRPS*AWTPGT Trigger: AGTACCGGGTGTCCATGCTCAAGATGGACGAGAGGA...TTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 |
||
| CDS-3UTR GCA 90 bp | CAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAGCACTGCTTCTGAGGTaGCTGCTGTTACCACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QTVKYSLFGWAGHWEGREALLLR*LLLPQV Trigger: AACCTGTGGTAACAGCAGGCACCTCAGAAGCAGTGC...TTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169870.8 |
||
| CDS-3UTR GCA 90 bp | CAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAATCCAGTTCTTCTCAATaGCAGGCACATGCCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: QTVKYSLFGWAGHWEGRESSSSQ*QAHAPC Trigger: GCATGGGGCATGTGCCTGGCATTGAGAAGAACTGGA...TTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 |
||
| CDS-3UTR TCA 90 bp | CAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAACTATCATCACTGAAGTaGGCAGTGCCCACCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: QTVKYSLFGWAGHWEGRELSSLK*AVPTTY Trigger: GTATGTGGTGGGCACTGCTCACTTCAGTGATGATAG...TTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 |
||
| CDS-3UTR GCA 90 bp | CAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAACACCCAGGTGGAATTTaGAGAATGGTACCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTVKYSLFGWAGHWEGREHPGGI*RMVPCW Trigger: CCAGCAAGGTACCATTCTGCAAATTCCACCTGGGTG...TTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 |
||
| CDS-3UTR GCA 90 bp | CAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAATCTCGGCCATCATCTaGTCCAACAGGTCCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTVKYSLFGWAGHWEGREISAII*SNRSFC Trigger: ACAGAAGGACCTGTTGGAGCAGATGATGGCCGAGAT...TTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 |
||
| CDS-3UTR CCA 90 bp | CAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAACTGTCATGATCTCCTaGATGTTGAGGTCGGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: QTVKYSLFGWAGHWEGRETVMIS*MLRSVL Trigger: GAGTACCGACCTCAACATCCAGGAGATCATGACAGT...TTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 |
||
| CDS-3UTR CCA 90 bp | AAAATTTATTTCTTTCTAGGGAATGAGTCCACAAGTGTGAGACAGAGTACACAGGGTCGGTCACCCAGGTaGAATTTGCAGAATGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: KIYFFLGNESTSVRQSTQGRSPR*NLQNGT Trigger: GGTACCATTCTGCAAATTCCACCTGGGTGACCGACC...CTGTGTACTCTGTCTCACACTTGTGGACTCATTCCCTAGAAAGAAATAAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| 3UTR CAA 72 bp | TCAGGGCACACAAACACAAATAAAAAGATGACTTCTTaGTCCTCACTGGATTTAAGGCTTGTATTTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SGHTNTNKKMTS*SSLDLRLVFPD Trigger: ATCAGGAAATACAAGCCTTAAATCCAGTGAGGACAAAGAAGTCATCTTTTTATTTGTGTTTGTGTGCCCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| CDS-3UTR CAA 90 bp | GGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCCCATAGGGGGTGGTTCCACGTCAGCCTCTaGAGCTGGCTTCTCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GWALGRQGKPGLGPHRGWFHVSL*SWLLLS Trigger: GGAGAGGAGAAGCCAGCTCAAGAGGCTGACGTGGAA...CCACCCCCTATGGGGGCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169870.8 ENSMUST00000169891.8 |
||
| CDS-3UTR CAA 90 bp | GGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCCCATAGGGGGTGGCACGACCACATCCGGTaGCACCTCCCGGATAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GWALGRQGKPGLGPHRGWHDHIR*HLPDSL Trigger: AAGACTATCCGGGAGGTGCAACCGGATGTGGTCGTG...CCACCCCCTATGGGGGCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAAACCCACAGTGAGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCCTCCAGCAAGCACCCTaGGCACTGCTTCTGAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PQTHSEMHSGPDAPAGQSLQQAP*ALLLRC Trigger: GCACCTCAGAAGCAGTGCCAAGGGTGCTTGCTGGAG...GCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCACTGTGGGTTTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCTGATGCCCATAGGTGGCCCCACAGTGTGTGTGTGGGCTGCTGGGAAGCCGTCCTCTCGTCCATCTaGAGCATGGACACCCGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GPDAHRWPHSVCVGCWEAVLSSI*SMDTRY Trigger: GTACCGGGTGTCCATGCTCAAGATGGACGAGAGGAC...GGCTTCCCAGCAGCCCACACACACACTGTGGGGCCACCTATGGGCATCAGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCTCCAGGCTGACCTCCTaGGCCTCTCGCAGCAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LYLGGLGIGKAGKAWPRPSRLTS*ASRSSV Trigger: GACGCTGCTGCGAGAGGCCAAGGAGGTCAGCCTGGA...GGGCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
||
| CDS-3UTR CAA 90 bp | TCACCCTCTGGAGGCAGAACTGTGCAGCAGGCAGTGACAGGACCAGGTTCAGGGTCCAGGCTGACCTCCTaGGCCTCTCGCAGCAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPSGGRTVQQAVTGPGSGSRLTS*ASRSSV Trigger: GACGCTGCTGCGAGAGGCCAAGGAGGTCAGCCTGGA...CCCTGAACCTGGTCCTGTCACTGCCTGCTGCACAGTTCTGCCTCCAGAGGGTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAAACCCACAGTGAGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCAGGCCCCAGGCCAGCTaGACTTTCTGCCAGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PQTHSEMHSGPDAPAGQSRPQAS*TFCQKE Trigger: CTCCTTCTGGCAGAAAGTCAAGCTGGCCTGGGGCCT...GCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCACTGTGGGTTTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
||
| CDS CCA 90 bp | GCCCCATGCCAACGACGCCCACAACCACAGACGGGACACACTTCCTaGGCTCAGCTTTCCATCACCATCAGAGGCGCGGGGAAGCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: APCQRRPQPQTGHTS*AQLSITIRGAGKLK Trigger: CTTGAGCTTCCCCGCGCCTCTGATGGTGATGGAAAGCTGAGCCCAGGAAGTGTGTCCCGTCTGTGGTTGTGGGCGTCGTTGGCATGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
||
| CDS-3UTR CAA 90 bp | ACCCACAGTGAGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCACAAGGTTCCACGTCAGCCTCTaGAGCTGGCTTCTCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: THSEMHSGPDAPAGQSTRFHVSL*SWLLLS Trigger: GGAGAGGAGAAGCCAGCTCAAGAGGCTGACGTGGAA...CCTTGTGCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCACTGTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| CDS-3UTR CAA 90 bp | GGTCCGACGGCCCATCCAGTACAGGCTATAGCCCAGGAGACCAAAGAAGGCCGCCACGACCACATCCGGTaGCACCTCCCGGATAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: GPTAHPVQAIAQETKEGRHDHIR*HLPDSL Trigger: AAGACTATCCGGGAGGTGCAACCGGATGTGGTCGTG...GCGGCCTTCTTTGGTCTCCTGGGCTATAGCCTGTACTGGATGGGCCGTCGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
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| CDS-3UTR CAA 90 bp | TCCGACGGCCCATCCAGTACAGGCTATAGCCCAGGAGACCAAAGAAGGCCGCCTAGGCCCCAGGCCAGCTaGACTTTCTGCCAGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: SDGPSSTGYSPGDQRRPPRPQAS*TFCQKE Trigger: CTCCTTCTGGCAGAAAGTCAAGCTGGCCTGGGGCCT...AGGCGGCCTTCTTTGGTCTCCTGGGCTATAGCCTGTACTGGATGGGCCGTCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
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| CDS-3UTR CAA 90 bp | CGGCCTGGCCGGGCTTCGCTCACCCTCTGGAGGCAGAACTGTGCAGCAGGCAGTATGATCTCCTGGATGTaGAGGTCGGTACTCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: RPGRASLTLWRQNCAAGSMISWM*RSVLQF Trigger: GAACTGGAGTACCGACCTCAACATCCAGGAGATCAT...ACTGCCTGCTGCACAGTTCTGCCTCCAGAGGGTGAGCGAAGCCCGGCCAGGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
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| CDS-3UTR CAA 90 bp | TCACCCTCTGGAGGCAGAACTGTGCAGCAGGCAGTGACAGGACCAGGTTCAGGGTTCCACGTCAGCCTCTaGAGCTGGCTTCTCCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SPSGGRTVQQAVTGPGSGFHVSL*SWLLLS Trigger: GGAGAGGAGAAGCCAGCTCAAGAGGCTGACGTGGAA...CCCTGAACCTGGTCCTGTCACTGCCTGCTGCACAGTTCTGCCTCCAGAGGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169870.8 ENSMUST00000169891.8 |
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| CDS-3UTR CAA 90 bp | AGACCAAAGAAGGCCGCCTTCACAGCCACCCGGGACACTCTGCCTGAGATGGACGTCCTCTCGTCCATCTaGAGCATGGACACCCGGTAC | + |
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Preference number: 5 (lower is better) Translates to: RPKKAAFTATRDTLPEMDVLSSI*SMDTRY Trigger: GTACCGGGTGTCCATGCTCAAGATGGACGAGAGGAC...GTCCATCTCAGGCAGAGTGTCCCGGGTGGCTGTGAAGGCGGCCTTCTTTGGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
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| CDS-3UTR CAA 90 bp | CTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCCACCTTGCTGGCCTCTTaGAAGGCCTCCCTGAACTCG | + |
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Preference number: 5 (lower is better) Translates to: LYLGGLGIGKAGKAWPRPTLLAS*KASLNS Trigger: CGAGTTCAGGGAGGCCTTCAAAGAGGCCAGCAAGGT...GGGCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
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| CDS-3UTR CAA 90 bp | TCACCCTCTGGAGGCAGAACTGTGCAGCAGGCAGTGACAGGACCAGGTTCAGGGACCTTGCTGGCCTCTTaGAAGGCCTCCCTGAACTCG | + |
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Preference number: 5 (lower is better) Translates to: SPSGGRTVQQAVTGPGSGTLLAS*KASLNS Trigger: CGAGTTCAGGGAGGCCTTCAAAGAGGCCAGCAAGGT...CCCTGAACCTGGTCCTGTCACTGCCTGCTGCACAGTTCTGCCTCCAGAGGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
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| CDS-3UTR CAA 90 bp | GTGAGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCACAAGGCACAGTGATCTCCAGGAGCAAGTaGAAGGCATCCACATCAGAG | + |
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Preference number: 5 (lower is better) Translates to: VRCTQAQMLLPARAQGTVISRSK*KASTSE Trigger: CTCTGATGTGGATGCCTTCAACTTGCTCCTGGAGAT...CACTGTGCCTTGTGCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
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| CDS-3UTR CAA 90 bp | AGAACTGTGCAGCAGGCAGTGACAGGACCAGGTTCAGGGTCCGACGGCCCATCCATCTCCAGGAGCAAGTaGAAGGCATCCACATCAGAG | + |
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Preference number: 5 (lower is better) Translates to: RTVQQAVTGPGSGSDGPSISRSK*KASTSE Trigger: CTCTGATGTGGATGCCTTCAACTTGCTCCTGGAGAT...GGATGGGCCGTCGGACCCTGAACCTGGTCCTGTCACTGCCTGCTGCACAGTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
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| CDS-3UTR CAA 90 bp | GGTCCGACGGCCCATCCAGTACAGGCTATAGCCCAGGAGACCAAAGAAGGCCGCTCACCCAGGTGGAATTaGCAGAATGGTACCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: GPTAHPVQAIAQETKEGRSPRWN*QNGTLL Trigger: CAGCAAGGTACCATTCTGCAAATTCCACCTGGGTGA...GCGGCCTTCTTTGGTCTCCTGGGCTATAGCCTGTACTGGATGGGCCGTCGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
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| CDS-3UTR CAA 90 bp | TTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCCGCTCCACGTCGTCTTaGCTGATTGGGTCTGACAGG | + |
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Preference number: 5 (lower is better) Translates to: FFIWVGWALGRQGKPGLGRSTSS*LIGSDR Trigger: CCTGTCAGACCCAATCAGCAAAGACGACGTGGAGCG...GCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
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| CDS-3UTR CAA 90 bp | CAGAGCACAAGGCACAGTGAGGTAGGTAGAGCAACAGCTTGCCAAACCCACCTGTTCCACGTCAGCCTCTaGAGCTGGCTTCTCCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: QSTRHSEVGRATACQTHLFHVSL*SWLLLS Trigger: GGAGAGGAGAAGCCAGCTCAAGAGGCTGACGTGGAA...CAGGTGGGTTTGGCAAGCTGTTGCTCTACCTACCTCACTGTGCCTTGTGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000169870.8 |
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| CDS-3UTR CAA 90 bp | CAGAGCACAAGGCACAGTGAGGTAGGTAGAGCAACAGCTTGCCAAACCCACCTGACCTTGCTGGCCTCTTaGAAGGCCTCCCTGAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: QSTRHSEVGRATACQTHLTLLAS*KASLNS Trigger: CGAGTTCAGGGAGGCCTTCAAAGAGGCCAGCAAGGT...CAGGTGGGTTTGGCAAGCTGTTGCTCTACCTACCTCACTGTGCCTTGTGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
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| CDS-3UTR CAA 90 bp | CCATCCAGTACAGGCTATAGCCCAGGAGACCAAAGAAGGCCGCCTTCACAGCCAAACAGGTCCTTCTGTTaGCAGCGCTCCACGTCGTCT | + |
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Preference number: 5 (lower is better) Translates to: PSSTGYSPGDQRRPPSQPNRSFC*QRSTSS Trigger: AGACGACGTGGAGCGCTGCAAACAGAAGGACCTGTT...TGGCTGTGAAGGCGGCCTTCTTTGGTCTCCTGGGCTATAGCCTGTACTGGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
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| CDS-3UTR CAA 90 bp | AGTGAGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCACAAGGCACAGTATGATCTCCTGGATGTaGAGGTCGGTACTCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: SEMHSGPDAPAGQSTRHSMISWM*RSVLQF Trigger: GAACTGGAGTACCGACCTCAACATCCAGGAGATCAT...ACTGTGCCTTGTGCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
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| CDS-3UTR CAA 90 bp | AAACCCCACAAAACCAGACTCTCTGCAGGCAGAGATGCAGCTGGCAATGCCACACACGACCACATCCGGTaGCACCTCCCGGATAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: KPHKTRLSAGRDAAGNATHDHIR*HLPDSL Trigger: AAGACTATCCGGGAGGTGCAACCGGATGTGGTCGTG...TGTGGCATTGCCAGCTGCATCTCTGCCTGCAGAGAGTCTGGTTTTGTGGGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
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| CDS-3UTR CAA 90 bp | AAACCCACAGTGAGATGCACTCAGGCCCAGATGCTCCTGCCGGCCAGAGCACAATCACCCAGGTGGAATTaGCAGAATGGTACCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: KPTVRCTQAQMLLPARAQSPRWN*QNGTLL Trigger: CAGCAAGGTACCATTCTGCAAATTCCACCTGGGTGA...TTGTGCTCTGGCCGGCAGGAGCATCTGGGCCTGAGTGCATCTCACTGTGGGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
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| CDS-3UTR CAA 90 bp | ATCAGGCTAAGGTCCTACCAACACCAAGGGCAGCCTTGCAGGCTCATATCTGAGCGCTCCACGTCGTCTTaGCTGATTGGGTCTGACAGG | + |
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Preference number: 5 (lower is better) Translates to: IRLRSYQHQGQPCRLISERSTSS*LIGSDR Trigger: CCTGTCAGACCCAATCAGCAAAGACGACGTGGAGCG...CTCAGATATGAGCCTGCAAGGCTGCCCTTGGTGTTGGTAGGACCTTAGCCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081702.12 |
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| CDS-3UTR CAA 90 bp | CAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAATCCAGGCTGACCTCCTaGGCCTCTCGCAGCAGCGTC | + |
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Preference number: 5 (lower is better) Translates to: QTVKYSLFGWAGHWEGRESRLTS*ASRSSV Trigger: GACGCTGCTGCGAGAGGCCAAGGAGGTCAGCCTGGA...TTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAGGCTCACCCAGGTGGAATTaGCAGAATGGTACCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: FFIWVGWALGRQGKPGLGSPRWN*QNGTLL Trigger: CAGCAAGGTACCATTCTGCAAATTCCACCTGGGTGA...GCCTAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
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| CDS-3UTR CAA 90 bp | ATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTACGCTCCACGTCGTCTTaGCTGATTGGGTCTGACAGG | + |
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Preference number: 5 (lower is better) Translates to: IFFIWVGWALGRQGKPGLRSTSS*LIGSDR Trigger: CCTGTCAGACCCAATCAGCAAAGACGACGTGGAGCG...TAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
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| CDS TCA 90 bp | TGGGGCGTTCACGCCGTCGTTTCAGTTTCATCTCCAGGAGCAAGTTaGAGGCATCCACATCAGAGATGTTCTGAGGGTCTCCAGCAAGCA | + |
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Preference number: 5 (lower is better) Translates to: WGVHAVVSVSSPGAS*RHPHQRCSEGLQQA Trigger: TGCTTGCTGGAGACCCTCAGAACATCTCTGATGTGGATGCCTTCAACTTGCTCCTGGAGATGAAACTGAAACGACGGCGTGAACGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000168863.8 ENSMUST00000169891.8 |
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| CDS-3UTR CAA 90 bp | ATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGCCTGGCCTAAACAGGTCCTTCTGTTaGCAGCGCTCCACGTCGTCT | + |
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Preference number: 5 (lower is better) Translates to: IFFIWVGWALGRQGKPGLNRSFC*QRSTSS Trigger: AGACGACGTGGAGCGCTGCAAACAGAAGGACCTGTT...TAGGCCAGGCTTTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000169891.8 |
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| CDS-3UTR CAA 90 bp | CAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAAGGCCCCAGGCCAGCTaGACTTTCTGCCAGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: QTVKYSLFGWAGHWEGRERPQAS*TFCQKE Trigger: CTCCTTCTGGCAGAAAGTCAAGCTGGCCTGGGGCCT...TTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 |
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| CDS-3UTR CAA 90 bp | CAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAGTCCTCTCGTCCATCTaGAGCATGGACACCCGGTAC | + |
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Preference number: 5 (lower is better) Translates to: QTVKYSLFGWAGHWEGREVLSSI*SMDTRY Trigger: GTACCGGGTGTCCATGCTCAAGATGGACGAGAGGAC...TTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 |
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| CDS-3UTR CAA 90 bp | CAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAATCTCCAGGAGCAAGTaGAAGGCATCCACATCAGAG | + |
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Preference number: 5 (lower is better) Translates to: QTVKYSLFGWAGHWEGREISRSK*KASTSE Trigger: CTCTGATGTGGATGCCTTCAACTTGCTCCTGGAGAT...TTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 |
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| CDS-3UTR CAA 90 bp | CAGACAGTTAAATATTCTTTATTTGGGTGGGCTGGGCATTGGGAAGGCAGGGAAATGATCTCCTGGATGTaGAGGTCGGTACTCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QTVKYSLFGWAGHWEGREMISWM*RSVLQF Trigger: GAACTGGAGTACCGACCTCAACATCCAGGAGATCAT...TTCCCTGCCTTCCCAATGCCCAGCCCACCCAAATAAAGAATATTTAACTGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 |
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| CDS CCA 72 bp | CAACGACGCCCACAACCACAGACGGGACACACTTCCTaGGCTCAGCTTTCCATCACCATCAGAGGCGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: QRRPQPQTGHTS*AQLSITIRGAG Trigger: CCCCGCGCCTCTGATGGTGATGGAAAGCTGAGCCCAGGAAGTGTGTCCCGTCTGTGGTTGTGGGCGTCGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169891.8 |
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| CDS GCA 72 bp | GGTCTCCAGCAAGCACCCTTGGCACTGCTTCTGAGGTaGCTGCTGTTACCACAGGTTCCACGTCAGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GLQQAPLALLLR*LLLPQVPRQPL Trigger: AAGAGGCTGACGTGGAACCTGTGGTAACAGCAGGCACCTCAGAAGCAGTGCCAAGGGTGCTTGCTGGAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000168863.8 ENSMUST00000169870.8 ENSMUST00000169891.8 |
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| CDS CAA 72 bp | CATCAGAGATGTTCTGAGGGTCTCCAGCAAGCACCCTaGGCACTGCTTCTGAGGTGCCTGCTGTTACCACAG | + |
|
Preference number: 6 (lower is better) Translates to: HQRCSEGLQQAP*ALLLRCLLLPQ Trigger: CTGTGGTAACAGCAGGCACCTCAGAAGCAGTGCCAAGGGTGCTTGCTGGAGACCCTCAGAACATCTCTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000081702.12 ENSMUST00000165690.2 ENSMUST00000168863.8 ENSMUST00000169891.8 |
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| CDS CAA 72 bp | ACATACAGATGTTCTGAGGGTCTCCAGCAAGCACCCTaGGCACTGCTTCTGAGGTGCCTGCTGTTACCACAG | + |
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Preference number: 6 (lower is better) Translates to: TYRCSEGLQQAP*ALLLRCLLLPQ Trigger: CTGTGGTAACAGCAGGCACCTCAGAAGCAGTGCCAAGGGTGCTTGCTGGAGACCCTCAGAACATCTGTATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169870.8 |
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