Pregenerated sensors for TPT1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000060126

Ensembl transcript IDs: ENSMUST00000110894.9, ENSMUST00000142061.3

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR TCA 90 bp	GCGATGCTCAACCAGGCTCTAGCTTCTCAGACTACAGGGTCAGCACAATCACAGAAGCATTTCCACCGATaGGCGAGTCATCGATGGCAC	+
Preference number: 4 (lower is better) Translates to: AMLNQALASQTTGSAQSQKHFHR*ASHRWH Trigger: GTGCCATCGATGACTCGCTCATCGGTGGAAATGCTT...CTGTGATTGTGCTGACCCTGTAGTCTGAGAAGCTAGAGCCTGGTTGAGCATCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110894.9 ENSMUST00000142061.3
CDS-3UTR TCA 90 bp	TCTTCCACTGGAGGTGATGAAAGTCAGGGTCCACTTCTCACCTCTCCCTTCACTAAGCATTTCCACCGATaGGCGAGTCATCGATGGCAC	+
Preference number: 4 (lower is better) Translates to: SSTGGDESQGPLLTSPFTKHFHR*ASHRWH Trigger: GTGCCATCGATGACTCGCTCATCGGTGGAAATGCTT...AGTGAAGGGAGAGGTGAGAAGTGGACCCTGACTTTCATCACCTCCAGTGGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142061.3
CDS-3UTR GCA 90 bp	TCTAGCGATGCTCAACCAGGCTCTAGCTTCTCAGACTACAGGGTCAGCACAATCGTGCTTAATCTGCTCTaGAGCTCCAGTCATAAAAGG	+
Preference number: 4 (lower is better) Translates to: SSDAQPGSSFSDYRVSTIVLNLL*SSSHKR Trigger: CCTTTTATGACTGGAGCTGCAGAGCAGATTAAGCAC...GATTGTGCTGACCCTGTAGTCTGAGAAGCTAGAGCCTGGTTGAGCATCGCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110894.9 ENSMUST00000142061.3
CDS-3UTR TCA 90 bp	GCTCTTCCACTGGAGGTGATGAAAGTCAGGGTCCACTTCTCACCTCTCCCTTCATGTAAGCCTCTTTTGTaGAGCTGGTTTCTTGTAAGT	+
Preference number: 4 (lower is better) Translates to: ALPLEVMKVRVHFSPLPSCKPLL*SWFLVS Trigger: ACTTACAAGAAACCAGCTTCACAAAAGAGGCTTACA...TGAAGGGAGAGGTGAGAAGTGGACCCTGACTTTCATCACCTCCAGTGGAAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142061.3
CDS-3UTR GCA 90 bp	GTGCTTTTGGTAAGCTCTTCCACTGGAGGTGATGAAAGTCAGGGTCCACTTCTCGTGCTTAATCTGCTCTaGAGCTCCAGTCATAAAAGG	+
Preference number: 4 (lower is better) Translates to: VLLVSSSTGGDESQGPLLVLNLL*SSSHKR Trigger: CCTTTTATGACTGGAGCTGCAGAGCAGATTAAGCAC...GAGAAGTGGACCCTGACTTTCATCACCTCCAGTGGAAGAGCTTACCAAAAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142061.3
CDS-3UTR TCA 90 bp	AAGAGGCTTAGCTTTCTAGCGATGCTCAACCAGGCTCTAGCTTCTCAGACTACATGTAAGCCTCTTTTGTaGAGCTGGTTTCTTGTAAGT	+
Preference number: 4 (lower is better) Translates to: KRLSFLAMLNQALASQTTCKPLL*SWFLVS Trigger: ACTTACAAGAAACCAGCTTCACAAAAGAGGCTTACA...TGTAGTCTGAGAAGCTAGAGCCTGGTTGAGCATCGCTAGAAAGCTAAGCCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110894.9 ENSMUST00000142061.3
CDS-3UTR CAA 90 bp	TCTAGCGATGCTCAACCAGGCTCTAGCTTCTCAGACTACAGGGTCAGCACAATCTTCTGCTCTTCAAGTTaGCCTTTGAGTGATTTCATG	+
Preference number: 5 (lower is better) Translates to: SSDAQPGSSFSDYRVSTIFCSSS*PLSDFM Trigger: CATGAAATCACTCAAAGGCAAACTTGAAGAGCAGAA...GATTGTGCTGACCCTGTAGTCTGAGAAGCTAGAGCCTGGTTGAGCATCGCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110894.9 ENSMUST00000142061.3
CDS-3UTR CAA 90 bp	TTTGTGCTTTTGGTAAGCTCTTCCACTGGAGGTGATGAAAGTCAGGGTCCACTTTTCTGCTCTTCAAGTTaGCCTTTGAGTGATTTCATG	+
Preference number: 5 (lower is better) Translates to: FVLLVSSSTGGDESQGPLFCSSS*PLSDFM Trigger: CATGAAATCACTCAAAGGCAAACTTGAAGAGCAGAA...AAGTGGACCCTGACTTTCATCACCTCCAGTGGAAGAGCTTACCAAAAGCACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142061.3