Pregenerated sensors for TPST1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034118Ensembl transcript IDs: ENSMUST00000040721.9, ENSMUST00000118993.8, ENSMUST00000142838.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGTGTCCCTGCTGGGCTCCTCATCCTGAGGGCCATGCATGTTCCTaGGCTCAAGAGCCATCACTTGGGGAGGCCCGGGTGTGTGACACC | + |
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Preference number: 1 (lower is better) Translates to: LCPCWAPHPEGHACS*AQEPSLGEARVCDT Trigger: GGTGTCACACACCCGGGCCTCCCCAAGTGATGGCTCTTGAGCCCAGGAACATGCATGGCCCTCAGGATGAGGAGCCCAGCAGGGACACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| 3UTR CCA 90 bp | AACAGAATGCCAACTTCAAACTCTCCTTTCCTTGAAATTAAAGACTaGAACCTGGGAAGGAAAGACAAGGACAAGAGGAGCTGTGACAGA | + |
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Preference number: 1 (lower is better) Translates to: NRMPTSNSPFLEIKD*NLGRKDKDKRSCDR Trigger: TCTGTCACAGCTCCTCTTGTCCTTGTCTTTCCTTCCCAGGTTCCAGTCTTTAATTTCAAGGAAAGGAGAGTTTGAAGTTGGCATTCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| 3UTR TCA 90 bp | GTGTTCTACAAAACATCGGAACGTGTACATAGAACCTATTCGGAATaGGACTGCCTGATTTTGTTAACAGAATGCCAACTTCAAACTCTC | + |
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Preference number: 1 (lower is better) Translates to: VFYKTSERVHRTYSE*DCLILLTECQLQTL Trigger: GAGAGTTTGAAGTTGGCATTCTGTTAACAAAATCAGGCAGTCTCATTCCGAATAGGTTCTATGTACACGTTCCGATGTTTTGTAGAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTCCTCATCCTGAGGGCCATGCATGTTCCTGGGCTCAAGAGCCATCACTTGCTGGGGACAGGAGGCTaGCAGGTGAACAGGAGCGAT | + |
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Preference number: 2 (lower is better) Translates to: GLLILRAMHVPGLKSHHLLGTGG*QVNRSD Trigger: ATCGCTCCTGTTCACCTGCCAGCCTCCTGTCCCCAG...CAAGTGATGGCTCTTGAGCCCAGGAACATGCATGGCCCTCAGGATGAGGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAGGACAAGAGGAGCTGTGACAGAACTGTGTCCCTGCTGGGCTCCTCATCCTCAGGAGGCTGGCAGGTaGACAGGAGCGATGGGCACA | + |
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Preference number: 2 (lower is better) Translates to: TRTRGAVTELCPCWAPHPQEAGR*TGAMGT Trigger: TGTGCCCATCGCTCCTGTTCACCTGCCAGCCTCCTG...AGGATGAGGAGCCCAGCAGGGACACAGTTCTGTCACAGCTCCTCTTGTCCTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| 3UTR-3UTR TCA 90 bp | GGTATTTACTATTATCCACATCGATACGTTTCAACAGGCACGAGTGTTCTACAACAGGAGGCTGGCAGGTaGACAGGAGCGATGGGCACA | + |
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Preference number: 2 (lower is better) Translates to: GIYYYPHRYVSTGTSVLQQEAGR*TGAMGT Trigger: TGTGCCCATCGCTCCTGTTCACCTGCCAGCCTCCTG...TTGTAGAACACTCGTGCCTGTTGAAACGTATCGATGTGGATAATAGTAAATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| 3UTR-3UTR CCA 90 bp | TACTATTATCCACATCGATACGTTTCAACAGGCACGAGTGTTCTACAAAACATCCTGGGGACAGGAGGCTaGCAGGTGAACAGGAGCGAT | + |
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Preference number: 2 (lower is better) Translates to: YYYPHRYVSTGTSVLQNILGTGG*QVNRSD Trigger: ATCGCTCCTGTTCACCTGCCAGCCTCCTGTCCCCAG...GATGTTTTGTAGAACACTCGTGCCTGTTGAAACGTATCGATGTGGATAATAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| 3UTR-3UTR TCA 90 bp | GGTATTTACTATTATCCACATCGATACGTTTCAACAGGCACGAGTGTTCTACAAGGACAAGAGGAGCTGTaGCAGAACTGTGTCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GIYYYPHRYVSTGTSVLQGQEEL*QNCVPA Trigger: AGCAGGGACACAGTTCTGTCACAGCTCCTCTTGTCC...TTGTAGAACACTCGTGCCTGTTGAAACGTATCGATGTGGATAATAGTAAATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| 3UTR CCA 72 bp | CCTGGGGACAGGAGGCTGGCAGGTGAACAGGAGCGATaGGCACAGACACTCCTTGTCGCAGCAGACAGCCGT | + |
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Preference number: 3 (lower is better) Translates to: PGDRRLAGEQER*AQTLLVAADSR Trigger: ACGGCTGTCTGCTGCGACAAGGAGTGTCTGTGCCCATCGCTCCTGTTCACCTGCCAGCCTCCTGTCCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| 3UTR CCA 72 bp | TGCTGGGCTCCTCATCCTGAGGGCCATGCATGTTCCTaGGCTCAAGAGCCATCACTTGGGGAGGCCCGGGTG | + |
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Preference number: 3 (lower is better) Translates to: CWAPHPEGHACS*AQEPSLGEARV Trigger: CACCCGGGCCTCCCCAAGTGATGGCTCTTGAGCCCAGGAACATGCATGGCCCTCAGGATGAGGAGCCCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| 3UTR TCA 72 bp | TGTGACAGAACTGTGTCCCTGCTGGGCTCCTCATCCTaGGGGCCATGCATGTTCCTGGGCTCAAGAGCCATC | + |
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Preference number: 3 (lower is better) Translates to: CDRTVSLLGSSS*GPCMFLGSRAI Trigger: GATGGCTCTTGAGCCCAGGAACATGCATGGCCCTCAGGATGAGGAGCCCAGCAGGGACACAGTTCTGTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| 3UTR CCA 72 bp | AGGACAAGAGGAGCTGTGACAGAACTGTGTCCCTGCTaGGCTCCTCATCCTGAGGGCCATGCATGTTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: RTRGAVTELCPC*APHPEGHACSW Trigger: CCAGGAACATGCATGGCCCTCAGGATGAGGAGCCCAGCAGGGACACAGTTCTGTCACAGCTCCTCTTGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| 3UTR GCA 72 bp | ACAAGGACAAGAGGAGCTGTGACAGAACTGTGTCCCTaGTGGGCTCCTCATCCTGAGGGCCATGCATGTTCC | + |
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Preference number: 3 (lower is better) Translates to: TRTRGAVTELCP*WAPHPEGHACS Trigger: GGAACATGCATGGCCCTCAGGATGAGGAGCCCAGCAGGGACACAGTTCTGTCACAGCTCCTCTTGTCCTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| 3UTR TCA 72 bp | AAAACATCGGAACGTGTACATAGAACCTATTCGGAATaGGACTGCCTGATTTTGTTAACAGAATGCCAACTT | + |
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Preference number: 3 (lower is better) Translates to: KTSERVHRTYSE*DCLILLTECQL Trigger: AAGTTGGCATTCTGTTAACAAAATCAGGCAGTCTCATTCCGAATAGGTTCTATGTACACGTTCCGATGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR TCA 90 bp | GTGAACAGGAGCGATGGGCACAGACACTCCTTGTCGCAGCAGACAGCCGTTCCCCCAGGATTCGAGGGATaGCCCTGGTTTCCTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: VNRSDGHRHSLSQQTAVPPGFEG*PWFPLH Trigger: GTGGAGAGGAAACCAGGGTCATCCCTCGAATCCTGG...GGGAACGGCTGTCTGCTGCGACAAGGAGTGTCTGTGCCCATCGCTCCTGTTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR GCA 90 bp | GGGCTCCTCATCCTGAGGGCCATGCATGTTCCTGGGCTCAAGAGCCATCACTTGGACCGGGACCACATCTaGTTCAGGGCCAGGATTCGA | + |
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Preference number: 4 (lower is better) Translates to: GLLILRAMHVPGLKSHHLDRDHI*FRARIR Trigger: TCGAATCCTGGCCCTGAAGCAGATGTGGTCCCGGTC...CAAGTGATGGCTCTTGAGCCCAGGAACATGCATGGCCCTCAGGATGAGGAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | GCAGGTGAACAGGAGCGATGGGCACAGACACTCCTTGTCGCAGCAGACAGCCGTGGTGATGGCACTCCATaGCATGCTGGCCCAGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: AGEQERWAQTLLVAADSRGDGTP*HAGPGK Trigger: TTTACCTGGGCCAGCATGCCATGGAGTGCCATCACC...ACGGCTGTCTGCTGCGACAAGGAGTGTCTGTGCCCATCGCTCCTGTTCACCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAGCTGTGACAGAACTGTGTCCCTGCTGGGCTCCTCATCCTGAGGGCCATTCCAGTCGGGCTGGCTaGCTACGTTCCTCTATTCGG | + |
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Preference number: 4 (lower is better) Translates to: RGAVTELCPCWAPHPEGHSSRAG*LRSSIR Trigger: CCGAATAGAGGAACGTAGCCAGCCAGCCCGACTGGA...ATGGCCCTCAGGATGAGGAGCCCAGCAGGGACACAGTTCTGTCACAGCTCCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | TGTTCCTGGGCTCAAGAGCCATCACTTGGGGAGGCCCGGGTGTGTGACACCCCCGGATCTTCTCTTTACTaGACCGGGACCACATCTGCT | + |
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Preference number: 4 (lower is better) Translates to: CSWAQEPSLGEARVCDTPGSSLY*TGTTSA Trigger: AGCAGATGTGGTCCCGGTCCAGTAAAGAGAAGATCC...GGGGGTGTCACACACCCGGGCCTCCCCAAGTGATGGCTCTTGAGCCCAGGAACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR TCA 90 bp | GGGCTCCTCATCCTGAGGGCCATGCATGTTCCTGGGCTCAAGAGCCATCACTTGCGTTCCTCTATTCGGTaGTGGCACTCCATGGCATGC | + |
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Preference number: 4 (lower is better) Translates to: GLLILRAMHVPGLKSHHLRSSIR*WHSMAC Trigger: GCATGCCATGGAGTGCCATCACCGAATAGAGGAACG...CAAGTGATGGCTCTTGAGCCCAGGAACATGCATGGCCCTCAGGATGAGGAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR TCA 90 bp | AGAGGAGCTGTGACAGAACTGTGTCCCTGCTGGGCTCCTCATCCTGAGGGCCATCTAGCACTTCATCTGTaGCACCCGCCTCATCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: RGAVTELCPCWAPHPEGHLALHL*HPPHPS Trigger: GCTTGGATGAGGCGGGTGTCACAGATGAAGTGCTAG...ATGGCCCTCAGGATGAGGAGCCCAGCAGGGACACAGTTCTGTCACAGCTCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR GCA 90 bp | AGGAGCGATGGGCACAGACACTCCTTGTCGCAGCAGACAGCCGTTCCCGAGATTGCGGATGTCAGGATGTaGGTCCAGCATAGCCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: RSDGHRHSLSQQTAVPEIADVRM*VQHSPH Trigger: ATGAGGGCTATGCTGGACGCACATCCTGACATCCGC...AATCTCGGGAACGGCTGTCTGCTGCGACAAGGAGTGTCTGTGCCCATCGCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR GCA 90 bp | AGAGGAGCTGTGACAGAACTGTGTCCCTGCTGGGCTCCTCATCCTGAGGGCCATGCGGATGTCAGGATGTaGGTCCAGCATAGCCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: RGAVTELCPCWAPHPEGHADVRM*VQHSPH Trigger: ATGAGGGCTATGCTGGACGCACATCCTGACATCCGC...ATGGCCCTCAGGATGAGGAGCCCAGCAGGGACACAGTTCTGTCACAGCTCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR GCA 90 bp | AGAGGAGCTGTGACAGAACTGTGTCCCTGCTGGGCTCCTCATCCTGAGGGCCATCTTGGCGAGCATGGGTaGAATCACGGCCATGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: RGAVTELCPCWAPHPEGHLGEHG*NHGHVL Trigger: CAAGACATGGCCGTGATTGCACCCATGCTCGCCAAG...ATGGCCCTCAGGATGAGGAGCCCAGCAGGGACACAGTTCTGTCACAGCTCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR TCA 90 bp | AGCCGTTCCCGAGATTTCCCTTCTGTAGACAAGGCAGCAGTCGTCCCTGTGGGACGTTCCTCTATTCGGTaGTGGCACTCCATGGCATGC | + |
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Preference number: 4 (lower is better) Translates to: SRSRDFPSVDKAAVVPVGRSSIR*WHSMAC Trigger: GCATGCCATGGAGTGCCATCACCGAATAGAGGAACG...TCCCACAGGGACGACTGCTGCCTTGTCTACAGAAGGGAAATCTCGGGAACGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR TCA 90 bp | AGGAGGCTGGCAGGTGAACAGGAGCGATGGGCACAGACACTCCTTGTCGCAGCAATGTTTTGTTGGCTTTaGTGTCGAGGCCAGCTCGCA | + |
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Preference number: 4 (lower is better) Translates to: RRLAGEQERWAQTLLVAAMFCWL*CRGQLA Trigger: TGCGAGCTGGCCTCGACATCAAAGCCAACAAAACAT...TGCTGCGACAAGGAGTGTCTGTGCCCATCGCTCCTGTTCACCTGCCAGCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR TCA 90 bp | AGCCGTTCCCGAGATTTCCCTTCTGTAGACAAGGCAGCAGTCGTCCCTGTGGGACTAGCACTTCATCTGTaGCACCCGCCTCATCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: SRSRDFPSVDKAAVVPVGLALHL*HPPHPS Trigger: GCTTGGATGAGGCGGGTGTCACAGATGAAGTGCTAG...TCCCACAGGGACGACTGCTGCCTTGTCTACAGAAGGGAAATCTCGGGAACGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR GCA 90 bp | TGGGCTCCTCATCCTGAGGGCCATGCATGTTCCTGGGCTCAAGAGCCATCACTTCTTGGCGAGCATGGGTaGAATCACGGCCATGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: WAPHPEGHACSWAQEPSLLGEHG*NHGHVL Trigger: CAAGACATGGCCGTGATTGCACCCATGCTCGCCAAG...AAGTGATGGCTCTTGAGCCCAGGAACATGCATGGCCCTCAGGATGAGGAGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | GACAAGGACAAGAGGAGCTGTGACAGAACTGTGTCCCTGCTGGGCTCCTCATCCGTTCTCCAGTCGGGCTaGCTGGCTACGTTCCTCTAT | + |
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Preference number: 4 (lower is better) Translates to: DKDKRSCDRTVSLLGSSSVLQSG*LATFLY Trigger: ATAGAGGAACGTAGCCAGCCAGCCCGACTGGAGAAC...GGATGAGGAGCCCAGCAGGGACACAGTTCTGTCACAGCTCCTCTTGTCCTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | GCAGGTGAACAGGAGCGATGGGCACAGACACTCCTTGTCGCAGCAGACAGCCGTTACACTGGTTGTACATaGTTTCTATGGCCCGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: AGEQERWAQTLLVAADSRYTGCT*FLWPGS Trigger: GGAACCGGGCCATAGAAACCATGTACAACCAGTGTA...ACGGCTGTCTGCTGCGACAAGGAGTGTCTGTGCCCATCGCTCCTGTTCACCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | TGTTCCTGGGCTCAAGAGCCATCACTTGGGGAGGCCCGGGTGTGTGACACCCCCCCGATCATTTCTTCATaGTGCAAAACGGAATGGTTC | + |
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Preference number: 4 (lower is better) Translates to: CSWAQEPSLGEARVCDTPPIISS*CKTEWF Trigger: GAACCATTCCGTTTTGCACCATGAAGAAATGATCGG...GGGGGTGTCACACACCCGGGCCTCCCCAAGTGATGGCTCTTGAGCCCAGGAACA 56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR GCA 90 bp | AGGAGCGATGGGCACAGACACTCCTTGTCGCAGCAGACAGCCGTTCCCGAGATTTCCAGAAGGAAGGCTTaGATGGCAGAATCTAGCACT | + |
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Preference number: 4 (lower is better) Translates to: RSDGHRHSLSQQTAVPEISRRKA*MAESST Trigger: AGTGCTAGATTCTGCCATGCAAGCCTTCCTTCTGGA...AATCTCGGGAACGGCTGTCTGCTGCGACAAGGAGTGTCTGTGCCCATCGCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | GCAGACAGCCGTTCCCGAGATTTCCCTTCTGTAGACAAGGCAGCAGTCGTCCCTGGATCTTCTCTTTACTaGACCGGGACCACATCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ADSRSRDFPSVDKAAVVPGSSLY*TGTTSA Trigger: AGCAGATGTGGTCCCGGTCCAGTAAAGAGAAGATCC...AGGGACGACTGCTGCCTTGTCTACAGAAGGGAAATCTCGGGAACGGCTGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | CCTGCTGGGCTCCTCATCCTGAGGGCCATGCATGTTCCTGGGCTCAAGAGCCATGAAGGAAGGCTTGCATaGCAGAATCTAGCACTTCAT | + |
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Preference number: 4 (lower is better) Translates to: PAGLLILRAMHVPGLKSHEGRLA*QNLALH Trigger: ATGAAGTGCTAGATTCTGCCATGCAAGCCTTCCTTC...ATGGCTCTTGAGCCCAGGAACATGCATGGCCCTCAGGATGAGGAGCCCAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | AGGAGCGATGGGCACAGACACTCCTTGTCGCAGCAGACAGCCGTTCCCGAGATTTACACTGGTTGTACATaGTTTCTATGGCCCGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: RSDGHRHSLSQQTAVPEIYTGCT*FLWPGS Trigger: GGAACCGGGCCATAGAAACCATGTACAACCAGTGTA...AATCTCGGGAACGGCTGTCTGCTGCGACAAGGAGTGTCTGTGCCCATCGCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | CCTGCTGGGCTCCTCATCCTGAGGGCCATGCATGTTCCTGGGCTCAAGAGCCATACGGGTTTGATGACTTaGTCTGTTGATCTTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: PAGLLILRAMHVPGLKSHTGLMT*SVDLST Trigger: GGTGGAAAGATCAACAGACCAAGTCATCAAACCCGT...ATGGCTCTTGAGCCCAGGAACATGCATGGCCCTCAGGATGAGGAGCCCAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | TGGGCTCCTCATCCTGAGGGCCATGCATGTTCCTGGGCTCAAGAGCCATCACTTGGTCATATCCAAGCTTaGCGAGCATGGGTGCAATCA | + |
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Preference number: 4 (lower is better) Translates to: WAPHPEGHACSWAQEPSLGHIQA*RAWVQS Trigger: TGATTGCACCCATGCTCGCCAAGCTTGGATATGACC...AAGTGATGGCTCTTGAGCCCAGGAACATGCATGGCCCTCAGGATGAGGAGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | AGCCGTTCCCGAGATTTCCCTTCTGTAGACAAGGCAGCAGTCGTCCCTGTGGGAGGTCATATCCAAGCTTaGCGAGCATGGGTGCAATCA | + |
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Preference number: 4 (lower is better) Translates to: SRSRDFPSVDKAAVVPVGGHIQA*RAWVQS Trigger: TGATTGCACCCATGCTCGCCAAGCTTGGATATGACC...TCCCACAGGGACGACTGCTGCCTTGTCTACAGAAGGGAAATCTCGGGAACGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | GACAAGGACAAGAGGAGCTGTGACAGAACTGTGTCCCTGCTGGGCTCCTCATCCAGGAGGATTGGCGTATaGGTCATATCCAAGCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: DKDKRSCDRTVSLLGSSSRRIGV*VISKLG Trigger: GCCAAGCTTGGATATGACCCATACGCCAATCCTCCT...GGATGAGGAGCCCAGCAGGGACACAGTTCTGTCACAGCTCCTCTTGTCCTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | TGGCAGGTGAACAGGAGCGATGGGCACAGACACTCCTTGTCGCAGCAGACAGCCTCCACTTGCTCCGTCTaGGGTTTTTCTTTCAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: WQVNRSDGHRHSLSQQTASTCSV*GFSFRK Trigger: CTTTCTGAAAGAAAAACCCCAGACGGAGCAAGTGGA...GGCTGTCTGCTGCGACAAGGAGTGTCTGTGCCCATCGCTCCTGTTCACCTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR TCA 90 bp | ACAAGGACAAGAGGAGCTGTGACAGAACTGTGTCCCTGCTGGGCTCCTCATCCTATGTTTTGTTGGCTTTaGTGTCGAGGCCAGCTCGCA | + |
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Preference number: 4 (lower is better) Translates to: TRTRGAVTELCPCWAPHPMFCWL*CRGQLA Trigger: TGCGAGCTGGCCTCGACATCAAAGCCAACAAAACAT...AGGATGAGGAGCCCAGCAGGGACACAGTTCTGTCACAGCTCCTCTTGTCCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | GCAGACAGCCGTTCCCGAGATTTCCCTTCTGTAGACAAGGCAGCAGTCGTCCCTTGTACATGGTTTCTATaGCCCGGTTCCACTTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: ADSRSRDFPSVDKAAVVPCTWFL*PGSTWS Trigger: TGACCAAGTGGAACCGGGCCATAGAAACCATGTACA...AGGGACGACTGCTGCCTTGTCTACAGAAGGGAAATCTCGGGAACGGCTGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | CCTGCTGGGCTCCTCATCCTGAGGGCCATGCATGTTCCTGGGCTCAAGAGCCATCCGATCATTTCTTCATaGTGCAAAACGGAATGGTTC | + |
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Preference number: 4 (lower is better) Translates to: PAGLLILRAMHVPGLKSHPIISS*CKTEWF Trigger: GAACCATTCCGTTTTGCACCATGAAGAAATGATCGG...ATGGCTCTTGAGCCCAGGAACATGCATGGCCCTCAGGATGAGGAGCCCAGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | CGATGGGCACAGACACTCCTTGTCGCAGCAGACAGCCGTTCCCGAGATTTCCCTTCCACTTGCTCCGTCTaGGGTTTTTCTTTCAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: RWAQTLLVAADSRSRDFPSTCSV*GFSFRK Trigger: CTTTCTGAAAGAAAAACCCCAGACGGAGCAAGTGGA...AGGGAAATCTCGGGAACGGCTGTCTGCTGCGACAAGGAGTGTCTGTGCCCATCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | AGGAGGCTGGCAGGTGAACAGGAGCGATGGGCACAGACACTCCTTGTCGCAGCACCAACTTCCATACACTaGTTGTACATGGTTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: RRLAGEQERWAQTLLVAAPTSIH*LYMVSM Trigger: CATAGAAACCATGTACAACCAGTGTATGGAAGTTGG...TGCTGCGACAAGGAGTGTCTGTGCCCATCGCTCCTGTTCACCTGCCAGCCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | GTGAACAGGAGCGATGGGCACAGACACTCCTTGTCGCAGCAGACAGCCGTTCCCTGGTTCCATGGAATATaGAGGAACTTTAAGAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: VNRSDGHRHSLSQQTAVPWFHGI*RNFKSV Trigger: AACGCTCTTAAAGTTCCTCCATATTCCATGGAACCA...GGGAACGGCTGTCTGCTGCGACAAGGAGTGTCTGTGCCCATCGCTCCTGTTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
||
| CDS-3UTR CCA 90 bp | AGCCGTTCCCGAGATTTCCCTTCTGTAGACAAGGCAGCAGTCGTCCCTGTGGGATGGTGCAAAACGGAATaGTTCCATGGAATATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRSRDFPSVDKAAVVPVGWCKTE*FHGIWR Trigger: CCTCCATATTCCATGGAACCATTCCGTTTTGCACCA...TCCCACAGGGACGACTGCTGCCTTGTCTACAGAAGGGAAATCTCGGGAACGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
||
| CDS-3UTR CCA 90 bp | GCAGACAGCCGTTCCCGAGATTTCCCTTCTGTAGACAAGGCAGCAGTCGTCCCTTGGTGCAAAACGGAATaGTTCCATGGAATATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ADSRSRDFPSVDKAAVVPWCKTE*FHGIWR Trigger: CCTCCATATTCCATGGAACCATTCCGTTTTGCACCA...AGGGACGACTGCTGCCTTGTCTACAGAAGGGAAATCTCGGGAACGGCTGTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | TGGGCTCCTCATCCTGAGGGCCATGCATGTTCCTGGGCTCAAGAGCCATCACTTTGTTTTCAAGGATCTTaGGGTCAGGTTTTCCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: WAPHPEGHACSWAQEPSLCFQGS*GQVFRS Trigger: ACTACGGAAAACCTGACCCCAAGATCCTTGAAAACA...AAGTGATGGCTCTTGAGCCCAGGAACATGCATGGCCCTCAGGATGAGGAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR GCA 90 bp | AGGAGCGATGGGCACAGACACTCCTTGTCGCAGCAGACAGCCGTTCCCGAGATTATCATTTCTTCATGGTaGAAAACGGAATGGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSDGHRHSLSQQTAVPEIIISSW*KTEWFH Trigger: ATGGAACCATTCCGTTTTGCACCATGAAGAAATGAT...AATCTCGGGAACGGCTGTCTGCTGCGACAAGGAGTGTCTGTGCCCATCGCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
||
| CDS-3UTR CCA 90 bp | AGCCGTTCCCGAGATTTCCCTTCTGTAGACAAGGCAGCAGTCGTCCCTGTGGGACCAACTTCCATACACTaGTTGTACATGGTTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: SRSRDFPSVDKAAVVPVGPTSIH*LYMVSM Trigger: CATAGAAACCATGTACAACCAGTGTATGGAAGTTGG...TCCCACAGGGACGACTGCTGCCTTGTCTACAGAAGGGAAATCTCGGGAACGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR GCA 90 bp | TGGGCTCCTCATCCTGAGGGCCATGCATGTTCCTGGGCTCAAGAGCCATCACTTATCATTTCTTCATGGTaGAAAACGGAATGGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WAPHPEGHACSWAQEPSLIISSW*KTEWFH Trigger: ATGGAACCATTCCGTTTTGCACCATGAAGAAATGAT...AAGTGATGGCTCTTGAGCCCAGGAACATGCATGGCCCTCAGGATGAGGAGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
||
| CDS-3UTR GCA 90 bp | TACTATTATCCACATCGATACGTTTCAACAGGCACGAGTGTTCTACAAAACATCGACCGGGACCACATCTaGTTCAGGGCCAGGATTCGA | + |
|
Preference number: 4 (lower is better) Translates to: YYYPHRYVSTGTSVLQNIDRDHI*FRARIR Trigger: TCGAATCCTGGCCCTGAAGCAGATGTGGTCCCGGTC...GATGTTTTGTAGAACACTCGTGCCTGTTGAAACGTATCGATGTGGATAATAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
||
| CDS-3UTR CCA 90 bp | TTCAACAGGCACGAGTGTTCTACAAAACATCGGAACGTGTACATAGAACCTATTGGTGATGGCACTCCATaGCATGCTGGCCCAGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FNRHECSTKHRNVYIEPIGDGTP*HAGPGK Trigger: TTTACCTGGGCCAGCATGCCATGGAGTGCCATCACC...AATAGGTTCTATGTACACGTTCCGATGTTTTGTAGAACACTCGTGCCTGTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
||
| CDS-3UTR CCA 90 bp | GGTATTTACTATTATCCACATCGATACGTTTCAACAGGCACGAGTGTTCTACAATCCAGTCGGGCTGGCTaGCTACGTTCCTCTATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GIYYYPHRYVSTGTSVLQSSRAG*LRSSIR Trigger: CCGAATAGAGGAACGTAGCCAGCCAGCCCGACTGGA...TTGTAGAACACTCGTGCCTGTTGAAACGTATCGATGTGGATAATAGTAAATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
||
| CDS-3UTR CCA 90 bp | AGGCACGAGTGTTCTACAAAACATCGGAACGTGTACATAGAACCTATTCGGAATTGTACATGGTTTCTATaGCCCGGTTCCACTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RHECSTKHRNVYIEPIRNCTWFL*PGSTWS Trigger: TGACCAAGTGGAACCGGGCCATAGAAACCATGTACA...ATTCCGAATAGGTTCTATGTACACGTTCCGATGTTTTGTAGAACACTCGTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
||
| CDS-3UTR CCA 90 bp | GGTATTTACTATTATCCACATCGATACGTTTCAACAGGCACGAGTGTTCTACAAAGGAGGATTGGCGTATaGGTCATATCCAAGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GIYYYPHRYVSTGTSVLQRRIGV*VISKLG Trigger: GCCAAGCTTGGATATGACCCATACGCCAATCCTCCT...TTGTAGAACACTCGTGCCTGTTGAAACGTATCGATGTGGATAATAGTAAATACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CCA 90 bp | GGAATGAGACTGCCTGATTTTGTTAACAGAATGCCAACTTCAAACTCTCCTTTCGAAGGAAGGCTTGCATaGCAGAATCTAGCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GMRLPDFVNRMPTSNSPFEGRLA*QNLALH Trigger: ATGAAGTGCTAGATTCTGCCATGCAAGCCTTCCTTC...GAAAGGAGAGTTTGAAGTTGGCATTCTGTTAACAAAATCAGGCAGTCTCATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
||
| CDS-3UTR CCA 90 bp | TACTATTATCCACATCGATACGTTTCAACAGGCACGAGTGTTCTACAAAACATCACGGGTTTGATGACTTaGTCTGTTGATCTTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: YYYPHRYVSTGTSVLQNITGLMT*SVDLST Trigger: GGTGGAAAGATCAACAGACCAAGTCATCAAACCCGT...GATGTTTTGTAGAACACTCGTGCCTGTTGAAACGTATCGATGTGGATAATAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
||
| CDS-3UTR CCA 90 bp | GGTATTTACTATTATCCACATCGATACGTTTCAACAGGCACGAGTGTTCTACAATGTTTTCAAGGATCTTaGGGTCAGGTTTTCCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GIYYYPHRYVSTGTSVLQCFQGS*GQVFRS Trigger: ACTACGGAAAACCTGACCCCAAGATCCTTGAAAACA...TTGTAGAACACTCGTGCCTGTTGAAACGTATCGATGTGGATAATAGTAAATACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTAACAGAATGCCAACTTCAAACTCTCCTTTCCTTGAAATTAAAGACTGGATGGTTCCATGGAATATaGAGGAACTTTAAGAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLTECQLQTLLSLKLKTGWFHGI*RNFKSV Trigger: AACGCTCTTAAAGTTCCTCCATATTCCATGGAACCA...TCCAGTCTTTAATTTCAAGGAAAGGAGAGTTTGAAGTTGGCATTCTGTTAACAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS CCA 90 bp | GTCGAGGCCAGCTCGCACAGTCGCCTTGGGGTTCTCCAGTCGGGCTaGCTGGCTACGTTCCTCTATTCGGTGATGGCACTCCATGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: VEASSHSRLGVLQSG*LATFLYSVMALHGM Trigger: CATGCCATGGAGTGCCATCACCGAATAGAGGAACGTAGCCAGCCAGCCCGACTGGAGAACCCCAAGGCGACTGTGCGAGCTGGCCTCGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 ENSMUST00000142838.2 |
||
| CDS GCA 90 bp | TCGAGGGATGACCCTGGTTTCCTCTCCACAGCGGATGTCAGGATGTaGGTCCAGCATAGCCCTCATGAGTGTGGTGCCGCTCCGAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SRDDPGFLSTADVRM*VQHSPHECGAAPRH Trigger: GTGCCTCGGAGCGGCACCACACTCATGAGGGCTATGCTGGACGCACATCCTGACATCCGCTGTGGAGAGGAAACCAGGGTCATCCCTCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 ENSMUST00000142838.2 |
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| CDS TCA 90 bp | TACTGGACCGGGACCACATCTGCTTCAGGGCCAGGATTCGAGGGATaGCCCTGGTTTCCTCTCCACAGCGGATGTCAGGATGTGCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YWTGTTSASGPGFEG*PWFPLHSGCQDVRP Trigger: TGGACGCACATCCTGACATCCGCTGTGGAGAGGAAACCAGGGTCATCCCTCGAATCCTGGCCCTGAAGCAGATGTGGTCCCGGTCCAGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 ENSMUST00000142838.2 |
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| CDS GCA 90 bp | GCCTCATCCAAGCGGATCTTCTCTTTACTGGACCGGGACCACATCTaGTTCAGGGCCAGGATTCGAGGGATGACCCTGGTTTCCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASSKRIFSLLDRDHI*FRARIRGMTLVSSP Trigger: TGGAGAGGAAACCAGGGTCATCCCTCGAATCCTGGCCCTGAAGCAGATGTGGTCCCGGTCCAGTAAAGAGAAGATCCGCTTGGATGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CAA 90 bp | TGGCAGGTGAACAGGAGCGATGGGCACAGACACTCCTTGTCGCAGCAGACAGCCAATGTTTTGTTGGCTTaGATGTCGAGGCCAGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: WQVNRSDGHRHSLSQQTANVLLA*MSRPAR Trigger: GCGAGCTGGCCTCGACATCAAAGCCAACAAAACATT...GGCTGTCTGCTGCGACAAGGAGTGTCTGTGCCCATCGCTCCTGTTCACCTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CAA 90 bp | GCAGGTGAACAGGAGCGATGGGCACAGACACTCCTTGTCGCAGCAGACAGCCGTCTTTCCGAGAAATCATaGAATGTACTGACGCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AGEQERWAQTLLVAADSRLSEKS*NVLTPG Trigger: GCCGGGCGTCAGTACATTCAATGATTTCTCGGAAAG...ACGGCTGTCTGCTGCGACAAGGAGTGTCTGTGCCCATCGCTCCTGTTCACCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CAA 90 bp | GGGCTCCTCATCCTGAGGGCCATGCATGTTCCTGGGCTCAAGAGCCATCACTTGCTTTCCGAGAAATCATaGAATGTACTGACGCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLLILRAMHVPGLKSHHLLSEKS*NVLTPG Trigger: GCCGGGCGTCAGTACATTCAATGATTTCTCGGAAAG...CAAGTGATGGCTCTTGAGCCCAGGAACATGCATGGCCCTCAGGATGAGGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CAA 90 bp | GCAGACAGCCGTTCCCGAGATTTCCCTTCTGTAGACAAGGCAGCAGTCGTCCCTAATGTTTTGTTGGCTTaGATGTCGAGGCCAGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: ADSRSRDFPSVDKAAVVPNVLLA*MSRPAR Trigger: GCGAGCTGGCCTCGACATCAAAGCCAACAAAACATT...AGGGACGACTGCTGCCTTGTCTACAGAAGGGAAATCTCGGGAACGGCTGTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS CCA 90 bp | CCAACCCACTTCGATAGCGCCCCCACGTTGACGGGTTTGATGACTTaGTCTGTTGATCTTTCCACCTTTGACAGAGAAACTCCCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PTHFDSAPTLTGLMT*SVDLSTFDRETPPA Trigger: AGCTGGGGGAGTTTCTCTGTCAAAGGTGGAAAGATCAACAGACCAAGTCATCAAACCCGTCAACGTGGGGGCGCTATCGAAGTGGGTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CAA 90 bp | AGGAGCGATGGGCACAGACACTCCTTGTCGCAGCAGACAGCCGTTCCCGAGATTACTTCCATACACTGGTaGTACATGGTTTCTATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSDGHRHSLSQQTAVPEITSIHW*YMVSMA Trigger: GGCCATAGAAACCATGTACAACCAGTGTATGGAAGT...AATCTCGGGAACGGCTGTCTGCTGCGACAAGGAGTGTCTGTGCCCATCGCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS CCA 90 bp | AAGGATCTTGGGGTCAGGTTTTCCGTAGTTAGGAGGATTGGCGTATaGGTCATATCCAAGCTTGGCGAGCATGGGTGCAATCACGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KDLGVRFSVVRRIGV*VISKLGEHGCNHGH Trigger: ATGGCCGTGATTGCACCCATGCTCGCCAAGCTTGGATATGACCCATACGCCAATCCTCCTAACTACGGAAAACCTGACCCCAAGATCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CAA 90 bp | ACAAGGACAAGAGGAGCTGTGACAGAACTGTGTCCCTGCTGGGCTCCTCATCCTTTGATCTTTCCACCTTaGACAGAGAAACTCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TRTRGAVTELCPCWAPHPLIFPP*TEKLPQ Trigger: CTGGGGGAGTTTCTCTGTCAAAGGTGGAAAGATCAA...AGGATGAGGAGCCCAGCAGGGACACAGTTCTGTCACAGCTCCTCTTGTCCTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS CCA 90 bp | ACTCCCCCAGCTTTCCCGATCATTTCTTCATGGTGCAAAACGGAATaGTTCCATGGAATATGGAGGAACTTTAAGAGCGTTCTCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TPPAFPIISSWCKTE*FHGIWRNFKSVLIH Trigger: GTGGATGAGAACGCTCTTAAAGTTCCTCCATATTCCATGGAACCATTCCGTTTTGCACCATGAAGAAATGATCGGGAAAGCTGGGGGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CAA 90 bp | TTCAACAGGCACGAGTGTTCTACAAAACATCGGAACGTGTACATAGAACCTATTGGGTCATATCCAAGCTaGGCGAGCATGGGTGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: FNRHECSTKHRNVYIEPIGSYPS*ASMGAI Trigger: GATTGCACCCATGCTCGCCAAGCTTGGATATGACCC...AATAGGTTCTATGTACACGTTCCGATGTTTTGTAGAACACTCGTGCCTGTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS CCA 90 bp | CCGATCATTTCTTCATGGTGCAAAACGGAATGGTTCCATGGAATATaGAGGAACTTTAAGAGCGTTCTCATCCACCGTTCAGGGTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: PIISSWCKTEWFHGI*RNFKSVLIHRSGCK Trigger: CTTACACCCTGAACGGTGGATGAGAACGCTCTTAAAGTTCCTCCATATTCCATGGAACCATTCCGTTTTGCACCATGAAGAAATGATCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CAA 90 bp | AGGCACGAGTGTTCTACAAAACATCGGAACGTGTACATAGAACCTATTCGGAATCCCACGTTGACGGGTTaGATGACTTGGTCTGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RHECSTKHRNVYIEPIRNPTLTG*MTWSVD Trigger: ATCAACAGACCAAGTCATCAAACCCGTCAACGTGGG...ATTCCGAATAGGTTCTATGTACACGTTCCGATGTTTTGTAGAACACTCGTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS-3UTR CAA 90 bp | TACTATTATCCACATCGATACGTTTCAACAGGCACGAGTGTTCTACAAAACATCGGGTCATATCCAAGCTaGGCGAGCATGGGTGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: YYYPHRYVSTGTSVLQNIGSYPS*ASMGAI Trigger: GATTGCACCCATGCTCGCCAAGCTTGGATATGACCC...GATGTTTTGTAGAACACTCGTGCCTGTTGAAACGTATCGATGTGGATAATAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS GCA 90 bp | TTTGACAGAGAAACTCCCCCAGCTTTCCCGATCATTTCTTCATGGTaGAAAACGGAATGGTTCCATGGAATATGGAGGAACTTTAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FDRETPPAFPIISSW*KTEWFHGIWRNFKS Trigger: GCTCTTAAAGTTCCTCCATATTCCATGGAACCATTCCGTTTTGCACCATGAAGAAATGATCGGGAAAGCTGGGGGAGTTTCTCTGTCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS CCA 90 bp | ACCTTTGACAGAGAAACTCCCCCAGCTTTCCCGATCATTTCTTCATaGTGCAAAACGGAATGGTTCCATGGAATATGGAGGAACTTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: TFDRETPPAFPIISS*CKTEWFHGIWRNFK Trigger: CTTAAAGTTCCTCCATATTCCATGGAACCATTCCGTTTTGCACCATGAAGAAATGATCGGGAAAGCTGGGGGAGTTTCTCTGTCAAAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS GCA 90 bp | TCCACCGTTCAGGGTGTAAGACGAGCTGTTCATAGTGAACCAACATaGATTTCTTATAACCAACTTCCATACACTGGTTGTACATGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: STVQGVRRAVHSEPT*ISYNQLPYTGCTWF Trigger: AAACCATGTACAACCAGTGTATGGAAGTTGGTTATAAGAAATGCATGTTGGTTCACTATGAACAGCTCGTCTTACACCCTGAACGGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
||
| CDS-3UTR CAA 90 bp | TTTGTTAACAGAATGCCAACTTCAAACTCTCCTTTCCTTGAAATTAAAGACTGGTTGATCTTTCCACCTTaGACAGAGAAACTCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FVNRMPTSNSPFLEIKDWLIFPP*TEKLPQ Trigger: CTGGGGGAGTTTCTCTGTCAAAGGTGGAAAGATCAA...CCAGTCTTTAATTTCAAGGAAAGGAGAGTTTGAAGTTGGCATTCTGTTAACAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
||
| CDS CAA 72 bp | TTGGCTTTGATGTCGAGGCCAGCTCGCACAGTCGCCTaGGGGTTCTCCAGTCGGGCTGGCTGGCTACGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LALMSRPARTVA*GFSSRAGWLRS Trigger: GGAACGTAGCCAGCCAGCCCGACTGGAGAACCCCAAGGCGACTGTGCGAGCTGGCCTCGACATCAAAGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 ENSMUST00000142838.2 |
||
| CDS CCA 72 bp | AGCTCGCACAGTCGCCTTGGGGTTCTCCAGTCGGGCTaGCTGGCTACGTTCCTCTATTCGGTGATGGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: SSHSRLGVLQSG*LATFLYSVMAL Trigger: GAGTGCCATCACCGAATAGAGGAACGTAGCCAGCCAGCCCGACTGGAGAACCCCAAGGCGACTGTGCGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 ENSMUST00000142838.2 |
||
| CDS GCA 72 bp | GACCCTGGTTTCCTCTCCACAGCGGATGTCAGGATGTaGGTCCAGCATAGCCCTCATGAGTGTGGTGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: DPGFLSTADVRM*VQHSPHECGAA Trigger: AGCGGCACCACACTCATGAGGGCTATGCTGGACGCACATCCTGACATCCGCTGTGGAGAGGAAACCAGGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 ENSMUST00000142838.2 |
||
| CDS TCA 72 bp | GGGACCACATCTGCTTCAGGGCCAGGATTCGAGGGATaGCCCTGGTTTCCTCTCCACAGCGGATGTCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GTTSASGPGFEG*PWFPLHSGCQD Trigger: ATCCTGACATCCGCTGTGGAGAGGAAACCAGGGTCATCCCTCGAATCCTGGCCCTGAAGCAGATGTGGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 ENSMUST00000142838.2 |
||
| CDS CAA 90 bp | AATGTTTTGTTGGCTTTGATGTCGAGGCCAGCTCGCACAGTCGCCTaGGGGTTCTCCAGTCGGGCTGGCTGGCTACGTTCCTCTATTCGG | + |
|
Preference number: 6 (lower is better) Translates to: NVLLALMSRPARTVA*GFSSRAGWLRSSIR Trigger: CCGAATAGAGGAACGTAGCCAGCCAGCCCGACTGGAGAACCCCAAGGCGACTGTGCGAGCTGGCCTCGACATCAAAGCCAACAAAACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 ENSMUST00000142838.2 |
||
| CDS GCA 72 bp | AAGCGGATCTTCTCTTTACTGGACCGGGACCACATCTaGTTCAGGGCCAGGATTCGAGGGATGACCCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: KRIFSLLDRDHI*FRARIRGMTLV Trigger: AACCAGGGTCATCCCTCGAATCCTGGCCCTGAAGCAGATGTGGTCCCGGTCCAGTAAAGAGAAGATCCGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
||
| CDS CCA 72 bp | GCTGGCTACGTTCCTCTATTCGGTGATGGCACTCCATaGCATGCTGGCCCAGGTAAAACACGGTCACAGAAC | + |
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Preference number: 6 (lower is better) Translates to: AGYVPLFGDGTP*HAGPGKTRSQN Trigger: GTTCTGTGACCGTGTTTTACCTGGGCCAGCATGCCATGGAGTGCCATCACCGAATAGAGGAACGTAGCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 ENSMUST00000142838.2 |
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| CDS CAA 90 bp | ACGTCCGGGGGTATCTTCCCAACCCACTTCGATAGCGCCCCCACGTaGACGGGTTTGATGACTTGGTCTGTTGATCTTTCCACCTTTGAC | + |
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Preference number: 6 (lower is better) Translates to: TSGGIFPTHFDSAPT*TGLMTWSVDLSTFD Trigger: GTCAAAGGTGGAAAGATCAACAGACCAAGTCATCAAACCCGTCAACGTGGGGGCGCTATCGAAGTGGGTTGGGAAGATACCCCCGGACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS CCA 72 bp | GATTGGCGTATGGGTCATATCCAAGCTTGGCGAGCATaGGTGCAATCACGGCCATGTCTTGTAAGACGTCCG | + |
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Preference number: 6 (lower is better) Translates to: DWRMGHIQAWRA*VQSRPCLVRRP Trigger: CGGACGTCTTACAAGACATGGCCGTGATTGCACCCATGCTCGCCAAGCTTGGATATGACCCATACGCCAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS CCA 72 bp | ACTGGTTGTACATGGTTTCTATGGCCCGGTTCCACTTaGTCAGACAGTCCCGGTAGCTGTTCAGGTCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: TGCTWFLWPGST*SDSPGSCSGQS Trigger: GCTTTGACCTGAACAGCTACCGGGACTGTCTGACCAAGTGGAACCGGGCCATAGAAACCATGTACAACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS CCA 72 bp | GGGGTCAGGTTTTCCGTAGTTAGGAGGATTGGCGTATaGGTCATATCCAAGCTTGGCGAGCATGGGTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: GVRFSVVRRIGV*VISKLGEHGCN Trigger: ATTGCACCCATGCTCGCCAAGCTTGGATATGACCCATACGCCAATCCTCCTAACTACGGAAAACCTGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS CAA 90 bp | GGTATCTTCCCAACCCACTTCGATAGCGCCCCCACGTTGACGGGTTaGATGACTTGGTCTGTTGATCTTTCCACCTTTGACAGAGAAACT | + |
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Preference number: 6 (lower is better) Translates to: GIFPTHFDSAPTLTG*MTWSVDLSTFDRET Trigger: AGTTTCTCTGTCAAAGGTGGAAAGATCAACAGACCAAGTCATCAAACCCGTCAACGTGGGGGCGCTATCGAAGTGGGTTGGGAAGATACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS GCA 72 bp | TCCCCATGTTTAACAATGACCTCCAGAAGGAAGGCTTaGATGGCAGAATCTAGCACTTCATCTGTGACACCC | + |
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Preference number: 6 (lower is better) Translates to: SPCLTMTSRRKA*MAESSTSSVTP Trigger: GGGTGTCACAGATGAAGTGCTAGATTCTGCCATGCAAGCCTTCCTTCTGGAGGTCATTGTTAAACATGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS GCA 72 bp | GAAACTCCCCCAGCTTTCCCGATCATTTCTTCATGGTaGAAAACGGAATGGTTCCATGGAATATGGAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: ETPPAFPIISSW*KTEWFHGIWRN Trigger: GTTCCTCCATATTCCATGGAACCATTCCGTTTTGCACCATGAAGAAATGATCGGGAAAGCTGGGGGAGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS CCA 72 bp | TCTTCATGGTGCAAAACGGAATGGTTCCATGGAATATaGAGGAACTTTAAGAGCGTTCTCATCCACCGTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSWCKTEWFHGI*RNFKSVLIHRS Trigger: TGAACGGTGGATGAGAACGCTCTTAAAGTTCCTCCATATTCCATGGAACCATTCCGTTTTGCACCATGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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| CDS CCA 72 bp | GCTTTCCCGATCATTTCTTCATGGTGCAAAACGGAATaGTTCCATGGAATATGGAGGAACTTTAAGAGCGTT | + |
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Preference number: 6 (lower is better) Translates to: AFPIISSWCKTE*FHGIWRNFKSV Trigger: AACGCTCTTAAAGTTCCTCCATATTCCATGGAACCATTCCGTTTTGCACCATGAAGAAATGATCGGGAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040721.9 ENSMUST00000118993.8 |
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